Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0800760 | XP_003612368.2 | 94.562 | 1232 | 57 | 2 | 1 | 1222 | 1 | 1232 | 0.0 | 2404 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0800760 | sp|F4JN26|MLH3_ARATH | 54.306 | 418 | 169 | 10 | 811 | 1222 | 754 | 1155 | 7.55e-127 | 422 |
Msa0800760 | sp|F4JN26|MLH3_ARATH | 45.889 | 377 | 156 | 2 | 1 | 368 | 1 | 338 | 2.62e-93 | 328 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0800760 | G7K187 | 94.562 | 1232 | 57 | 2 | 1 | 1222 | 1 | 1232 | 0.0 | 2404 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0800760 | Msa0838940 | 0.970598 | 7.330567e-132 | -8.615850e-47 |
Msa0800760 | Msa1188950 | 0.817790 | 2.746661e-52 | -8.615850e-47 |
Msa0800760 | Msa1188970 | 0.805890 | 1.072667e-49 | -8.615850e-47 |
Msa0800760 | Msa1195920 | 0.802347 | 5.858010e-49 | -8.615850e-47 |
Msa0800760 | Msa1398630 | 0.805464 | 1.318538e-49 | -8.615850e-47 |
Msa0180300 | Msa0800760 | 0.807303 | 5.397829e-50 | -8.615850e-47 |
Msa0331920 | Msa0800760 | 0.801576 | 8.437639e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0800760 | MtrunA17_Chr5g0407101 | 94.562 | 1232 | 57 | 2 | 1 | 1222 | 1 | 1232 | 0.0 | 2404 |
Msa0800760 | MtrunA17_Chr1g0195721 | 24.528 | 371 | 236 | 10 | 4 | 358 | 8 | 350 | 1.03e-20 | 99.0 |
Msa0800760 | MtrunA17_Chr1g0195721 | 27.434 | 226 | 129 | 5 | 977 | 1185 | 719 | 926 | 7.73e-11 | 67.0 |
Msa0800760 | MtrunA17_Chr3g0077711 | 29.348 | 276 | 158 | 8 | 4 | 255 | 7 | 269 | 8.00e-18 | 89.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0800760 | AT4G35520.8 | 54.048 | 420 | 171 | 10 | 809 | 1222 | 528 | 931 | 2.96e-129 | 420 |
Msa0800760 | AT4G35520.8 | 36.686 | 169 | 97 | 2 | 250 | 409 | 8 | 175 | 8.48e-25 | 112 |
Msa0800760 | AT4G35520.6 | 54.306 | 418 | 169 | 10 | 811 | 1222 | 742 | 1143 | 7.12e-128 | 422 |
Msa0800760 | AT4G35520.6 | 43.091 | 427 | 185 | 4 | 1 | 409 | 1 | 387 | 9.32e-96 | 332 |
Msa0800760 | AT4G35520.1 | 54.306 | 418 | 169 | 10 | 811 | 1222 | 754 | 1155 | 7.67e-128 | 422 |
Msa0800760 | AT4G35520.1 | 45.889 | 377 | 156 | 2 | 1 | 368 | 1 | 338 | 2.66e-94 | 328 |
Msa0800760 | AT4G35520.3 | 54.306 | 418 | 169 | 10 | 811 | 1222 | 752 | 1153 | 8.95e-128 | 422 |
Msa0800760 | AT4G35520.3 | 55.143 | 350 | 146 | 2 | 1 | 341 | 1 | 348 | 2.05e-118 | 396 |
Msa0800760 | AT4G35520.2 | 54.306 | 418 | 169 | 10 | 811 | 1222 | 779 | 1180 | 1.10e-127 | 422 |
Msa0800760 | AT4G35520.2 | 48.712 | 427 | 198 | 4 | 1 | 409 | 1 | 424 | 2.88e-120 | 402 |
Msa0800760 | AT4G35520.7 | 52.304 | 434 | 171 | 11 | 809 | 1222 | 540 | 957 | 2.16e-125 | 410 |
Msa0800760 | AT4G35520.7 | 42.857 | 119 | 68 | 0 | 250 | 368 | 8 | 126 | 1.62e-23 | 108 |
Msa0800760 | AT4G35520.5 | 52.546 | 432 | 169 | 11 | 811 | 1222 | 742 | 1157 | 4.32e-124 | 412 |
Msa0800760 | AT4G35520.5 | 43.091 | 427 | 185 | 4 | 1 | 409 | 1 | 387 | 1.33e-95 | 332 |
Msa0800760 | AT4G35520.4 | 43.091 | 427 | 185 | 4 | 1 | 409 | 1 | 387 | 5.60e-96 | 332 |
Msa0800760 | AT4G35520.4 | 49.711 | 346 | 157 | 9 | 811 | 1150 | 742 | 1076 | 3.58e-87 | 307 |
Msa0800760 | AT4G09140.1 | 31.071 | 280 | 148 | 10 | 4 | 255 | 29 | 291 | 4.50e-19 | 94.0 |
Msa0800760 | AT4G02460.2 | 25.990 | 404 | 224 | 15 | 4 | 377 | 17 | 375 | 7.21e-19 | 93.2 |
Msa0800760 | AT4G02460.1 | 25.990 | 404 | 224 | 15 | 4 | 377 | 17 | 375 | 8.00e-19 | 93.2 |
Find 268 sgRNAs with CRISPR-Local
Find 707 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCATATATCTTGAATTTA+AGG | 0.086807 | 5_3:+14272239 | Msa0800760:CDS |
TACATCGAAATTTCTTAATT+TGG | 0.131266 | 5_3:+14270319 | Msa0800760:CDS |
ACAACTTTGAAGGAGATATT+TGG | 0.162274 | 5_3:-14271568 | None:intergenic |
TGACTATCTTTGCAGGAATT+TGG | 0.205955 | 5_3:+14278556 | Msa0800760:intron |
ATTGATTGAAGTACCTTATT+GGG | 0.214424 | 5_3:-14271511 | None:intergenic |
GATTGATTGAAGTACCTTAT+TGG | 0.215758 | 5_3:-14271512 | None:intergenic |
GTGCAAGATTCCGGAGATTA+TGG | 0.216270 | 5_3:+14276963 | Msa0800760:CDS |
CGGTTATTCTGGCAATTTAC+TGG | 0.226743 | 5_3:+14274897 | Msa0800760:CDS |
CACTTGTAACCACTGGCTTT+GGG | 0.232639 | 5_3:+14271721 | Msa0800760:CDS |
TTGAATATTTAGGTATTATC+TGG | 0.241070 | 5_3:+14278042 | Msa0800760:intron |
GACCCTGCTTCCAAACTTCT+AGG | 0.247169 | 5_3:+14276131 | Msa0800760:CDS |
ATCAACTACTTCATAGTTAC+AGG | 0.248733 | 5_3:+14278215 | Msa0800760:CDS |
AACTCCAAACCGATAGCTTT+TGG | 0.249668 | 5_3:+14275271 | Msa0800760:CDS |
TCACTTGTAACCACTGGCTT+TGG | 0.249770 | 5_3:+14271720 | Msa0800760:CDS |
TTTGGAAGCTTCACGAATAA+TGG | 0.259750 | 5_3:-14268897 | None:intergenic |
TCTGGATTCTTGCATCTTGC+TGG | 0.260504 | 5_3:+14277199 | Msa0800760:CDS |
CTTCGTCAGACCGGTTATTC+TGG | 0.261638 | 5_3:+14274886 | Msa0800760:CDS |
TCTTAAGGTGCGATTATGTT+TGG | 0.264068 | 5_3:+14279128 | Msa0800760:intron |
CATTTCTTACTGATAGTATC+AGG | 0.266001 | 5_3:-14277235 | None:intergenic |
TTCAACAAAATGATCCATTC+AGG | 0.266010 | 5_3:+14276503 | Msa0800760:CDS |
AATATACTTGACATCTCTTC+TGG | 0.266206 | 5_3:+14277181 | Msa0800760:CDS |
CTTAAGGTGCGATTATGTTT+GGG | 0.269942 | 5_3:+14279129 | Msa0800760:intron |
CCTCAAAGAGAAACAAAATA+AGG | 0.270902 | 5_3:+14274855 | Msa0800760:CDS |
GTTTCAGTGTTTGTTGATAT+TGG | 0.273741 | 5_3:+14269206 | Msa0800760:CDS |
CATTTCTGAAGTCTCTTTGT+TGG | 0.291486 | 5_3:+14270397 | Msa0800760:CDS |
AACGATATCATAAAGCTTAC+TGG | 0.297572 | 5_3:+14271783 | Msa0800760:CDS |
CATAGCGGTGGACATGCTTT+TGG | 0.298068 | 5_3:-14274932 | None:intergenic |
TGATTGAAACGTCGACGTTT+TGG | 0.303133 | 5_3:-14268915 | None:intergenic |
AAAAGGTCATCAAACAGTTC+TGG | 0.303292 | 5_3:+14274292 | Msa0800760:CDS |
GAAACGGAGTTCAGAGGTTC+TGG | 0.308935 | 5_3:+14276426 | Msa0800760:CDS |
AACAGACCCAACATTATAAA+AGG | 0.310471 | 5_3:+14275951 | Msa0800760:CDS |
TCCAATAGATCTTCATTGTT+GGG | 0.311658 | 5_3:-14276289 | None:intergenic |
CGATGAAGATGAGGAATTCT+AGG | 0.312546 | 5_3:-14268943 | None:intergenic |
CTAAACAATCCTTACGATCT+TGG | 0.315143 | 5_3:-14274726 | None:intergenic |
CAAGCAAAGTCTTCTCGTTC+AGG | 0.317110 | 5_3:-14275233 | None:intergenic |
CCCCAACAATGAAGATCTAT+TGG | 0.321390 | 5_3:+14276288 | Msa0800760:CDS |
TTCTAACACACTCAGGTAAT+AGG | 0.325451 | 5_3:-14275923 | None:intergenic |
CTCCAACAAAGCCACTTATA+TGG | 0.326027 | 5_3:+14274433 | Msa0800760:CDS |
ATGATACACATTTCACAAAA+AGG | 0.328678 | 5_3:+14275871 | Msa0800760:CDS |
CTACGAACAGATTCCGATAA+AGG | 0.341565 | 5_3:-14269002 | None:intergenic |
CCGGAGATTATGGGAATAAA+TGG | 0.344536 | 5_3:+14276973 | Msa0800760:CDS |
ACCAATGATATTAATGATCT+TGG | 0.347298 | 5_3:+14275564 | Msa0800760:CDS |
CACTGTTCCTTTAGTCAACT+TGG | 0.348856 | 5_3:+14279321 | Msa0800760:CDS |
TTGTTTCAGAATTGATATCT+AGG | 0.349287 | 5_3:+14276937 | Msa0800760:intron |
CAACTTTGAAGGAGATATTT+GGG | 0.351489 | 5_3:-14271567 | None:intergenic |
TTCAATATCAACAACTTTGA+AGG | 0.351846 | 5_3:-14271578 | None:intergenic |
CATGCAGATATATCAAAGTT+TGG | 0.352223 | 5_3:+14274700 | Msa0800760:intron |
TCCAAGATCATTAATATCAT+TGG | 0.357505 | 5_3:-14275565 | None:intergenic |
GCATACATCCCTCTGTTTCC+AGG | 0.358909 | 5_3:+14279199 | Msa0800760:CDS |
CAACATTATAAAAGGCGAAT+TGG | 0.362809 | 5_3:+14275959 | Msa0800760:CDS |
GAAATAATGACAAGAACTTA+TGG | 0.365886 | 5_3:+14270419 | Msa0800760:CDS |
CTCCTTCTACTTCTATGAAA+TGG | 0.368433 | 5_3:-14276047 | None:intergenic |
GCTTTAGCTCTTCAACTAGA+AGG | 0.372548 | 5_3:-14279178 | None:intergenic |
TGGATTTGTTTCCTCCGAAC+TGG | 0.374132 | 5_3:-14271355 | None:intergenic |
AAAATTCTGAATCCTTTAGA+AGG | 0.374608 | 5_3:+14278281 | Msa0800760:CDS |
TTTACCTGCTTTGGCTGAAA+TGG | 0.374834 | 5_3:-14274489 | None:intergenic |
CAACAAAGAGACTTCAGAAA+TGG | 0.375063 | 5_3:-14270396 | None:intergenic |
AACCTATCTAGATGCTGAAC+AGG | 0.381349 | 5_3:+14278080 | Msa0800760:CDS |
TCTAGGGAAGTGCAAGATTC+CGG | 0.388056 | 5_3:+14276954 | Msa0800760:CDS |
AATACTTTCCTATATCCATT+TGG | 0.389721 | 5_3:-14270446 | None:intergenic |
CAGTAAATTGCCAGAATAAC+CGG | 0.392348 | 5_3:-14274896 | None:intergenic |
AACCATATAAGTGGCTTTGT+TGG | 0.392990 | 5_3:-14274435 | None:intergenic |
CAGGGAACAGATTAAAGATT+GGG | 0.394408 | 5_3:+14278234 | Msa0800760:CDS |
CAGGTCCCTTGCAAACGAAC+TGG | 0.395404 | 5_3:-14272111 | None:intergenic |
CTAACAAACAATTGTTTACA+TGG | 0.395922 | 5_3:+14279599 | Msa0800760:three_prime_UTR |
AACCCTTGCTGTTATTGATC+AGG | 0.398168 | 5_3:+14277321 | Msa0800760:CDS |
AATATTATCATAGAAACTTT+CGG | 0.404601 | 5_3:-14275037 | None:intergenic |
ATCGAAATTTCTTAATTTGG+CGG | 0.404648 | 5_3:+14270322 | Msa0800760:CDS |
TACTCGAGATGGGCTGGAAT+TGG | 0.405515 | 5_3:+14269529 | Msa0800760:CDS |
ATTGTCTCCCTCTAGATTCA+TGG | 0.408060 | 5_3:+14275427 | Msa0800760:CDS |
CTGAATTGGAAGCCCCAATA+AGG | 0.417478 | 5_3:+14271498 | Msa0800760:intron |
AGAAAGGAAGTAGGCACAAC+AGG | 0.420276 | 5_3:+14270604 | Msa0800760:CDS |
AACCACTGGCTTTGGGGTGG+AGG | 0.425969 | 5_3:+14271728 | Msa0800760:CDS |
TACTCCAAAAGCTATCGGTT+TGG | 0.428894 | 5_3:-14275275 | None:intergenic |
TAAAGAAATATTCAACAGAT+TGG | 0.428963 | 5_3:+14275830 | Msa0800760:CDS |
ATGACAATCATCAGTGCTAC+AGG | 0.429264 | 5_3:+14274785 | Msa0800760:CDS |
AGGGTTCTGCCAGCCATGAT+TGG | 0.431893 | 5_3:-14277304 | None:intergenic |
TATTACAGAAATTTATCAAA+TGG | 0.436143 | 5_3:-14279636 | None:intergenic |
CATGTCAAGGAATGCTAACC+AGG | 0.437046 | 5_3:+14275749 | Msa0800760:CDS |
GGCGACGATAAGACCTTTAT+CGG | 0.438204 | 5_3:+14268989 | Msa0800760:CDS |
CTTAAATTCAAGATATATGC+AGG | 0.440812 | 5_3:-14272238 | None:intergenic |
AAGCTTACTGGATACATATC+AGG | 0.441992 | 5_3:+14271795 | Msa0800760:CDS |
TTCCAATAGATCTTCATTGT+TGG | 0.442789 | 5_3:-14276290 | None:intergenic |
TTCATTTAGCTTGTCTGAAG+TGG | 0.442895 | 5_3:-14274761 | None:intergenic |
ATGGACGGCCAAATGGATAT+AGG | 0.443464 | 5_3:+14270438 | Msa0800760:CDS |
TTTAAATCAGCCTCCCGAAA+TGG | 0.444086 | 5_3:+14276079 | Msa0800760:CDS |
ATGCAGGTACTGCCAGAGAT+TGG | 0.445165 | 5_3:+14278190 | Msa0800760:intron |
CTCCATTTCATAGAAGTAGA+AGG | 0.445805 | 5_3:+14276045 | Msa0800760:CDS |
TTCATTGTGCAGTGTGCTCA+TGG | 0.448403 | 5_3:+14279289 | Msa0800760:intron |
CACTCAGGTAATAGGCAGTC+TGG | 0.454013 | 5_3:-14275915 | None:intergenic |
TCATAGAAACTTTCGGCAGC+AGG | 0.454172 | 5_3:-14275030 | None:intergenic |
AAGAGAAAAGCAACCTGGAT+TGG | 0.454580 | 5_3:-14271375 | None:intergenic |
GTAGAGCAACTCTTTAGAAA+AGG | 0.454936 | 5_3:-14275195 | None:intergenic |
GGTTATGAGTGCCATGGGTT+CGG | 0.455266 | 5_3:+14275138 | Msa0800760:CDS |
TGGTATTCAGCAACACAAAC+AGG | 0.455374 | 5_3:+14275447 | Msa0800760:CDS |
TGCAAGATTCCGGAGATTAT+GGG | 0.455509 | 5_3:+14276964 | Msa0800760:CDS |
TGACTTAAAAGCTTATGAAC+AGG | 0.455665 | 5_3:-14272130 | None:intergenic |
TTGTTGGGGCTAAGAGCATC+AGG | 0.457417 | 5_3:-14276274 | None:intergenic |
GCAACACAAACAGGTAACTT+TGG | 0.459066 | 5_3:+14275456 | Msa0800760:CDS |
AAAGGTCATCAAACAGTTCT+GGG | 0.460494 | 5_3:+14274293 | Msa0800760:CDS |
TATGAATCACCTTCATATCC+AGG | 0.462141 | 5_3:-14271830 | None:intergenic |
AATGACGCTGCTGAGATTGA+AGG | 0.462435 | 5_3:+14276463 | Msa0800760:CDS |
TATTCAACAGATTGGTTGAC+TGG | 0.463602 | 5_3:+14275838 | Msa0800760:CDS |
ATCCACCTGATGAAGAACTT+TGG | 0.466886 | 5_3:-14277269 | None:intergenic |
CTCAAAGAGAAACAAAATAA+GGG | 0.467320 | 5_3:+14274856 | Msa0800760:CDS |
TGGATATAGGAAAGTATTGA+AGG | 0.472768 | 5_3:+14270451 | Msa0800760:CDS |
AGAACTTATGGACGGCCAAA+TGG | 0.473558 | 5_3:+14270431 | Msa0800760:CDS |
ATCTTCTTGAACCATATAAG+TGG | 0.476038 | 5_3:-14274444 | None:intergenic |
ACAGGGAACAGATTAAAGAT+TGG | 0.476385 | 5_3:+14278233 | Msa0800760:CDS |
TGGAATTACTCGAGATGGGC+TGG | 0.478152 | 5_3:+14269523 | Msa0800760:CDS |
TCAAAGTTGTTGATATTGAA+AGG | 0.484148 | 5_3:+14271581 | Msa0800760:CDS |
CATAATCAAATAGCCAAGCT+TGG | 0.487009 | 5_3:+14279352 | Msa0800760:CDS |
AAATGTGTATCATGGAAATC+AGG | 0.487329 | 5_3:-14275861 | None:intergenic |
CTTTAGCTCTTCAACTAGAA+GGG | 0.488271 | 5_3:-14279177 | None:intergenic |
AATACTAAACTTCATTGAAA+AGG | 0.489534 | 5_3:+14274275 | Msa0800760:CDS |
TTGCTTACTCCAAAAGCTAT+CGG | 0.489893 | 5_3:-14275280 | None:intergenic |
GGATGCCAAAGTTCTTCATC+AGG | 0.491605 | 5_3:+14277264 | Msa0800760:CDS |
CATATAAGTGGCTTTGTTGG+AGG | 0.492033 | 5_3:-14274432 | None:intergenic |
GATAACAATGATTTATTGCA+AGG | 0.492434 | 5_3:+14274982 | Msa0800760:CDS |
TTGTTACTTACTGCTAATAG+TGG | 0.492806 | 5_3:+14279495 | Msa0800760:three_prime_UTR |
CTTGTTCATCAGTCCAAGCT+TGG | 0.495904 | 5_3:-14279365 | None:intergenic |
CCTCGATGCTCGCGCTACAA+AGG | 0.496323 | 5_3:+14269091 | Msa0800760:CDS |
ACCTGCTTTGGCTGAAATGG+TGG | 0.497376 | 5_3:-14274486 | None:intergenic |
GAATTGGTGGGAGAAAGATA+TGG | 0.497867 | 5_3:+14269545 | Msa0800760:CDS |
TCGAGATGGGCTGGAATTGG+TGG | 0.499643 | 5_3:+14269532 | Msa0800760:CDS |
CCACTGTCACTTGTAACCAC+TGG | 0.501918 | 5_3:+14271714 | Msa0800760:CDS |
AGGGTCGGATGCTAGACCGC+TGG | 0.502251 | 5_3:-14276114 | None:intergenic |
CCATTTATTCCCATAATCTC+CGG | 0.503204 | 5_3:-14276973 | None:intergenic |
ATCATAGAACTAATGTGAAA+CGG | 0.504755 | 5_3:+14276410 | Msa0800760:intron |
AACTTGAGGTGCATGGATCC+TGG | 0.505219 | 5_3:-14275767 | None:intergenic |
ATCGGTTATCAAACTCTGAA+TGG | 0.506997 | 5_3:+14275487 | Msa0800760:CDS |
GTAACTTTGGTTCTGATGAT+CGG | 0.510715 | 5_3:+14275469 | Msa0800760:CDS |
CTCCTGTTCAGCATCTAGAT+AGG | 0.511106 | 5_3:-14278082 | None:intergenic |
GGAGGTGGAATTACTCGAGA+TGG | 0.511633 | 5_3:+14269518 | Msa0800760:intron |
AACAGATTAAAGATTGGGGC+TGG | 0.512814 | 5_3:+14278239 | Msa0800760:CDS |
CCAATAGATCTTCATTGTTG+GGG | 0.514398 | 5_3:-14276288 | None:intergenic |
TTGAAGGTTATGAGTGCCAT+GGG | 0.514841 | 5_3:+14275133 | Msa0800760:CDS |
CAACTCCCAGTTCGTTTGCA+AGG | 0.515346 | 5_3:+14272105 | Msa0800760:CDS |
CTGTGAGATATACCTTCTAA+AGG | 0.516124 | 5_3:-14278293 | None:intergenic |
GTTTGGAAGCCAAGATCGTA+AGG | 0.516892 | 5_3:+14274717 | Msa0800760:CDS |
GGGTGCAAGTGTATATATCT+TGG | 0.517916 | 5_3:+14270568 | Msa0800760:CDS |
GCTCAAAACATATAAAGAGC+GGG | 0.517968 | 5_3:-14272266 | None:intergenic |
TTGCAATACCCTGGATATGA+AGG | 0.518092 | 5_3:+14271821 | Msa0800760:CDS |
AAACCTAGAAGTTTGGAAGC+AGG | 0.519365 | 5_3:-14276134 | None:intergenic |
TGCAACTTCTACACAGGGAC+GGG | 0.520833 | 5_3:-14275346 | None:intergenic |
GGTTATGATGTAGAGATTGG+TGG | 0.521108 | 5_3:+14275159 | Msa0800760:CDS |
ACATTGAACTCACCCCTGAA+TGG | 0.521481 | 5_3:-14276517 | None:intergenic |
TATTCTACAACCAACCAGTT+CGG | 0.522442 | 5_3:+14271341 | Msa0800760:CDS |
ACTGGAAGACTTGCGTCAAA+AGG | 0.523475 | 5_3:+14277959 | Msa0800760:CDS |
AACTCCCAGTTCGTTTGCAA+GGG | 0.524126 | 5_3:+14272106 | Msa0800760:CDS |
AGTAGTTGATAACCAATCTC+TGG | 0.524732 | 5_3:-14278202 | None:intergenic |
TTCGGTTATGATGTAGAGAT+TGG | 0.525279 | 5_3:+14275156 | Msa0800760:CDS |
TGTAACCACTGGCTTTGGGG+TGG | 0.527919 | 5_3:+14271725 | Msa0800760:CDS |
GAAGAACTTCTCGCATAAGA+AGG | 0.530402 | 5_3:-14275060 | None:intergenic |
TGGCATTGATGATGATAGAA+AGG | 0.533656 | 5_3:+14270588 | Msa0800760:CDS |
GGGTCGGATGCTAGACCGCT+GGG | 0.537874 | 5_3:-14276113 | None:intergenic |
TCCACTATTTGCAAAACTTG+AGG | 0.543285 | 5_3:-14275781 | None:intergenic |
AAATTAAATGAAGAAGATGC+TGG | 0.543458 | 5_3:+14275093 | Msa0800760:CDS |
ATGGATACAGAGATACTGTA+AGG | 0.543591 | 5_3:-14271963 | None:intergenic |
GCCACCATTTCAGCCAAAGC+AGG | 0.544008 | 5_3:+14274485 | Msa0800760:CDS |
TCAACAAAATGATCCATTCA+GGG | 0.544139 | 5_3:+14276504 | Msa0800760:CDS |
TGTTTCAGAATTGATATCTA+GGG | 0.546621 | 5_3:+14276938 | Msa0800760:intron |
TTTGCAAAACTTGAGGTGCA+TGG | 0.547477 | 5_3:-14275774 | None:intergenic |
ACTTGTAACCACTGGCTTTG+GGG | 0.548380 | 5_3:+14271722 | Msa0800760:CDS |
AAATTGACACCTAAAATACA+TGG | 0.549038 | 5_3:-14278726 | None:intergenic |
TCTAGATGCTGAACAGGAGC+TGG | 0.549469 | 5_3:+14278086 | Msa0800760:CDS |
AAATTCATTCCAATCATGGC+TGG | 0.550857 | 5_3:+14277295 | Msa0800760:CDS |
GATGAAGATGAGGAATTCTA+GGG | 0.552245 | 5_3:-14268942 | None:intergenic |
CTACGATCGCGATGAAGATG+AGG | 0.553314 | 5_3:-14268952 | None:intergenic |
ATCATCAACAATGCCACCCT+CGG | 0.553332 | 5_3:+14278900 | Msa0800760:CDS |
ATCGTAGCAGCGAAGCGTGA+TGG | 0.554388 | 5_3:+14268968 | Msa0800760:exon |
GTGATCTGTGAATCATTTGA+AGG | 0.554622 | 5_3:+14275117 | Msa0800760:CDS |
GGTATTATCTGGAGAAGCAA+AGG | 0.556103 | 5_3:+14278053 | Msa0800760:intron |
GGAGGCCATCTTCGTCAGAC+CGG | 0.556644 | 5_3:+14274877 | Msa0800760:CDS |
AAACGGAGTTCAGAGGTTCT+GGG | 0.556723 | 5_3:+14276427 | Msa0800760:CDS |
AACCTAGAAGTTTGGAAGCA+GGG | 0.559255 | 5_3:-14276133 | None:intergenic |
ATCAGGTCCTTGCAATACCC+TGG | 0.559752 | 5_3:+14271812 | Msa0800760:CDS |
AGCTCAAGTAACAAGTGGCA+TGG | 0.560858 | 5_3:+14279388 | Msa0800760:CDS |
TGTTCCTTTAGTCAACTTGG+AGG | 0.562952 | 5_3:+14279324 | Msa0800760:CDS |
TTAAGGTGCGATTATGTTTG+GGG | 0.564590 | 5_3:+14279130 | Msa0800760:intron |
GTTATGATGTAGAGATTGGT+GGG | 0.564818 | 5_3:+14275160 | Msa0800760:CDS |
TTTGGAGTAAGCAAAACCTA+GGG | 0.566038 | 5_3:+14275289 | Msa0800760:CDS |
ATGACGCTGCTGAGATTGAA+GGG | 0.566125 | 5_3:+14276464 | Msa0800760:CDS |
AATAACCGGTCTGACGAAGA+TGG | 0.566285 | 5_3:-14274882 | None:intergenic |
GATGATGATAGAAAGGAAGT+AGG | 0.569154 | 5_3:+14270595 | Msa0800760:CDS |
TTTGAAGGTTATGAGTGCCA+TGG | 0.569684 | 5_3:+14275132 | Msa0800760:CDS |
AGTGCCTCCAAGTTGACTAA+AGG | 0.574131 | 5_3:-14279328 | None:intergenic |
TTGCAACTTCTACACAGGGA+CGG | 0.575314 | 5_3:-14275347 | None:intergenic |
GACAACATAACTGGAGTTTG+AGG | 0.579541 | 5_3:-14277008 | None:intergenic |
GGAGGAAACAAATCCAATCC+AGG | 0.580368 | 5_3:+14271362 | Msa0800760:CDS |
TTGATTGAAGTACCTTATTG+GGG | 0.583424 | 5_3:-14271510 | None:intergenic |
CTTCTACTTCTATGAAATGG+AGG | 0.585489 | 5_3:-14276044 | None:intergenic |
AGGTCCCTTGCAAACGAACT+GGG | 0.587913 | 5_3:-14272110 | None:intergenic |
AATGACAATCGCTCTTGTTG+CGG | 0.589049 | 5_3:+14278598 | Msa0800760:CDS |
GAGGTGGAATTACTCGAGAT+GGG | 0.591799 | 5_3:+14269519 | Msa0800760:CDS |
TAGAAGTTTGGAAGCAGGGT+CGG | 0.592890 | 5_3:-14276129 | None:intergenic |
ATTTCTTACTGATAGTATCA+GGG | 0.593444 | 5_3:-14277234 | None:intergenic |
TTTGTTTCCTCCGAACTGGT+TGG | 0.594493 | 5_3:-14271351 | None:intergenic |
TTGACTAAAGGAACAGTGGT+TGG | 0.596025 | 5_3:-14279316 | None:intergenic |
CGAGATGGGCTGGAATTGGT+GGG | 0.596864 | 5_3:+14269533 | Msa0800760:CDS |
GAGCATCTAGATGCAGTACA+AGG | 0.602335 | 5_3:+14275676 | Msa0800760:CDS |
AACGGAGTTCAGAGGTTCTG+GGG | 0.602590 | 5_3:+14276428 | Msa0800760:CDS |
ATAATCTCACCTGGAAACAG+AGG | 0.602946 | 5_3:-14279208 | None:intergenic |
CTTGCAAAAGTGACGTGTGT+CGG | 0.603205 | 5_3:-14268855 | None:intergenic |
ACTTCAGTTATGACATGTCA+AGG | 0.604592 | 5_3:+14275736 | Msa0800760:CDS |
ATGAATCACCTTCATATCCA+GGG | 0.605531 | 5_3:-14271829 | None:intergenic |
TTCAAGATATATGCAGGGCA+TGG | 0.607221 | 5_3:-14272232 | None:intergenic |
TGGAGACGAAAGAATCAGAC+TGG | 0.608130 | 5_3:+14277941 | Msa0800760:CDS |
GACCTGATCAATAACAGCAA+GGG | 0.609846 | 5_3:-14277323 | None:intergenic |
CTCAAAACATATAAAGAGCG+GGG | 0.609938 | 5_3:-14272265 | None:intergenic |
GGTTTGAGCATCGTAACTCG+TGG | 0.611142 | 5_3:+14272164 | Msa0800760:CDS |
TGCCAAAGTTCTTCATCAGG+TGG | 0.611303 | 5_3:+14277267 | Msa0800760:CDS |
ACTAGAAGGGAGCATTCTGA+TGG | 0.612665 | 5_3:-14279164 | None:intergenic |
CTGTTGATTACTTACATCGA+GGG | 0.615245 | 5_3:+14274824 | Msa0800760:CDS |
CTGAATACCATGAATCTAGA+GGG | 0.615850 | 5_3:-14275434 | None:intergenic |
AAGAGTTGCTCTACACAAAG+AGG | 0.616039 | 5_3:+14275204 | Msa0800760:CDS |
CGACTTCACAAGAATCGTTG+AGG | 0.618882 | 5_3:+14269052 | Msa0800760:CDS |
GGAGTAAGCAAAACCTAGGG+GGG | 0.619378 | 5_3:+14275292 | Msa0800760:CDS |
CTACATCATAACCGAACCCA+TGG | 0.620434 | 5_3:-14275149 | None:intergenic |
GCTGAATACCATGAATCTAG+AGG | 0.621627 | 5_3:-14275435 | None:intergenic |
TAATCTCACCTGGAAACAGA+GGG | 0.622362 | 5_3:-14279207 | None:intergenic |
TGTCTGAAGTGGAAAAGAAG+AGG | 0.623855 | 5_3:-14274750 | None:intergenic |
CAATCAAGAAATGTGTGATG+CGG | 0.624369 | 5_3:+14271530 | Msa0800760:CDS |
TTTAGGAGTCGTACAACCGA+GGG | 0.628386 | 5_3:-14278916 | None:intergenic |
AGCTCAAAACATATAAAGAG+CGG | 0.628689 | 5_3:-14272267 | None:intergenic |
TCAACTACTTCATAGTTACA+GGG | 0.628877 | 5_3:+14278216 | Msa0800760:CDS |
GGAAGCTTCACGAATAATGG+CGG | 0.631364 | 5_3:-14268894 | None:intergenic |
CTAAATTCAAAATCGTGCAG+AGG | 0.632682 | 5_3:+14278934 | Msa0800760:CDS |
TCATTGTGCAGTGTGCTCAT+GGG | 0.633237 | 5_3:+14279290 | Msa0800760:intron |
CATTTCATAGAAGTAGAAGG+AGG | 0.633795 | 5_3:+14276048 | Msa0800760:CDS |
TTCATATCCAGGGTATTGCA+AGG | 0.634101 | 5_3:-14271819 | None:intergenic |
TGGAGTAAGCAAAACCTAGG+GGG | 0.636676 | 5_3:+14275291 | Msa0800760:CDS |
CAATGCAGTAGCTCGAGATG+AGG | 0.637844 | 5_3:-14275529 | None:intergenic |
TAATGTGAAACGGAGTTCAG+AGG | 0.639049 | 5_3:+14276420 | Msa0800760:CDS |
ACAAGAGCTCAAGTAACAAG+TGG | 0.645352 | 5_3:+14279383 | Msa0800760:CDS |
TGACAATCATCAGTGCTACA+GGG | 0.650522 | 5_3:+14274786 | Msa0800760:CDS |
GAGATTATGGGAATAAATGG+AGG | 0.650561 | 5_3:+14276976 | Msa0800760:CDS |
AGGGAACAGATTAAAGATTG+GGG | 0.650828 | 5_3:+14278235 | Msa0800760:CDS |
ATTTAGGAGTCGTACAACCG+AGG | 0.651899 | 5_3:-14278917 | None:intergenic |
TGAGACTTCAGAAGAAACCA+TGG | 0.654954 | 5_3:+14279472 | Msa0800760:exon |
GACCTCCACCCCAAAGCCAG+TGG | 0.655193 | 5_3:-14271730 | None:intergenic |
TAATGACAAGAACTTATGGA+CGG | 0.657018 | 5_3:+14270423 | Msa0800760:CDS |
TTAAATTCAAGATATATGCA+GGG | 0.659067 | 5_3:-14272237 | None:intergenic |
AGACCTGATCAATAACAGCA+AGG | 0.659668 | 5_3:-14277324 | None:intergenic |
GAGTAAGCAAAACCTAGGGG+GGG | 0.660417 | 5_3:+14275293 | Msa0800760:CDS |
AGGAGTCGTACAACCGAGGG+TGG | 0.660860 | 5_3:-14278913 | None:intergenic |
CAACAAAATGATCCATTCAG+GGG | 0.663093 | 5_3:+14276505 | Msa0800760:CDS |
AAAGAGAAACAAAATAAGGG+AGG | 0.666982 | 5_3:+14274859 | Msa0800760:CDS |
CCAGTGGTTACAAGTGACAG+TGG | 0.669527 | 5_3:-14271714 | None:intergenic |
TCTACAACCAACCAGTTCGG+AGG | 0.673318 | 5_3:+14271344 | Msa0800760:CDS |
ACGGAGTTCAGAGGTTCTGG+GGG | 0.673977 | 5_3:+14276429 | Msa0800760:CDS |
AGTTGCTCTACACAAAGAGG+TGG | 0.676104 | 5_3:+14275207 | Msa0800760:CDS |
CTTCAGCTAGCTGATACTGA+CGG | 0.676315 | 5_3:+14278877 | Msa0800760:intron |
CAAGTTGACTAAAGGAACAG+TGG | 0.677062 | 5_3:-14279320 | None:intergenic |
TGGGAGAGAAGCATAGCTTG+TGG | 0.677167 | 5_3:+14274312 | Msa0800760:CDS |
AATGCTACGAGTGAAAACTT+CGG | 0.679690 | 5_3:+14270350 | Msa0800760:CDS |
TCTGTTGATTACTTACATCG+AGG | 0.679989 | 5_3:+14274823 | Msa0800760:CDS |
TCAAAACATATAAAGAGCGG+GGG | 0.683425 | 5_3:-14272264 | None:intergenic |
TTGGAGTAAGCAAAACCTAG+GGG | 0.687311 | 5_3:+14275290 | Msa0800760:CDS |
GAAGAACTTTGGCATCCTCG+AGG | 0.706267 | 5_3:-14277258 | None:intergenic |
TATGCGAGAAGTTCTTCACG+TGG | 0.708464 | 5_3:+14275066 | Msa0800760:CDS |
TCGATGTAAGTAATCAACAG+AGG | 0.724205 | 5_3:-14274821 | None:intergenic |
CAATCATCAGTGCTACAGGG+AGG | 0.729888 | 5_3:+14274789 | Msa0800760:CDS |
TTAGCAGTAAGTAACAACCA+TGG | 0.730413 | 5_3:-14279489 | None:intergenic |
CCTTTGTAGCGCGAGCATCG+AGG | 0.736933 | 5_3:-14269091 | None:intergenic |
ATGGTAGCTAAAAGACCCAG+CGG | 0.738543 | 5_3:+14276098 | Msa0800760:CDS |
TTGGGGCTAAGAGCATCAGG+AGG | 0.744656 | 5_3:-14276271 | None:intergenic |
TATCAGTAAGAAATGCCTCG+AGG | 0.751021 | 5_3:+14277243 | Msa0800760:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTACTAATAAGATAATAT+AGG | - | chr5_3:14272354-14272373 | None:intergenic | 10.0% |
!! | ATAAATTGAATATAAGAAAA+AGG | - | chr5_3:14278805-14278824 | None:intergenic | 10.0% |
!!! | AAAAGCATTTATAAAATTAA+AGG | - | chr5_3:14279107-14279126 | None:intergenic | 10.0% |
!!! | TATCTAATATTTAGAGTTTA+GGG | - | chr5_3:14270146-14270165 | None:intergenic | 15.0% |
!! | ATAGAATATAGTATAATGTA+AGG | + | chr5_3:14270834-14270853 | Msa0800760:intron | 15.0% |
!!! | GTATAATTATTATATGCTTT+TGG | + | chr5_3:14271036-14271055 | Msa0800760:intron | 15.0% |
!! | TATATTCATATATTGTCATA+TGG | - | chr5_3:14271985-14272004 | None:intergenic | 15.0% |
!! | ATTGTAATATTAGTACAAAA+TGG | + | chr5_3:14272012-14272031 | Msa0800760:intron | 15.0% |
!!! | AGTTTTGATTTTTTATAGAT+GGG | - | chr5_3:14273381-14273400 | None:intergenic | 15.0% |
!!! | AAGTTTTGATTTTTTATAGA+TGG | - | chr5_3:14273382-14273401 | None:intergenic | 15.0% |
!!! | TGTTTTTTTTTTTTTACCAA+CGG | + | chr5_3:14273507-14273526 | Msa0800760:intron | 15.0% |
!!! | TCATTTTATTATTATTGAGA+GGG | + | chr5_3:14273561-14273580 | Msa0800760:intron | 15.0% |
!! | ATATAAATACAAAGAATTAC+TGG | + | chr5_3:14274367-14274386 | Msa0800760:intron | 15.0% |
!! | AATATTATCATAGAAACTTT+CGG | - | chr5_3:14275040-14275059 | None:intergenic | 15.0% |
!! | AATTAGATTATATAGAGAAA+CGG | + | chr5_3:14278488-14278507 | Msa0800760:intron | 15.0% |
!! | ATTCATTCAATTTATTATTC+TGG | + | chr5_3:14278518-14278537 | Msa0800760:intron | 15.0% |
!!! | GATGTTAATTATTTACTTTT+AGG | + | chr5_3:14278701-14278720 | Msa0800760:intron | 15.0% |
!! | ATTTATCATCGTTTAATAAT+TGG | + | chr5_3:14278819-14278838 | Msa0800760:intron | 15.0% |
!!! | TTATAAATGCTTTTTTCTTA+AGG | + | chr5_3:14279113-14279132 | Msa0800760:intron | 15.0% |
!! | TATTACAGAAATTTATCAAA+TGG | - | chr5_3:14279639-14279658 | None:intergenic | 15.0% |
!!! | CAAAATTTGTAACTAAGTTT+TGG | + | chr5_3:14269456-14269475 | Msa0800760:intron | 20.0% |
!!! | CTATCTAATATTTAGAGTTT+AGG | - | chr5_3:14270147-14270166 | None:intergenic | 20.0% |
!! | CTCTAAATATTAGATAGTAA+AGG | + | chr5_3:14270150-14270169 | Msa0800760:intron | 20.0% |
!! | TACATCGAAATTTCTTAATT+TGG | + | chr5_3:14270319-14270338 | Msa0800760:CDS | 20.0% |
!!! | TATTTTATTTTATTGACTGC+AGG | + | chr5_3:14270546-14270565 | Msa0800760:intron | 20.0% |
!!! | ATTTTATTTTATTGACTGCA+GGG | + | chr5_3:14270547-14270566 | Msa0800760:intron | 20.0% |
!!! | TCTTTTGACTTATACTTTTT+TGG | + | chr5_3:14271059-14271078 | Msa0800760:intron | 20.0% |
!! | TTAAATTCAAGATATATGCA+GGG | - | chr5_3:14272240-14272259 | None:intergenic | 20.0% |
!!! | AATTCAACATAAGTTTTTGA+CGG | - | chr5_3:14272298-14272317 | None:intergenic | 20.0% |
!! | AAAAACTTATGTTGAATTCA+AGG | + | chr5_3:14272300-14272319 | Msa0800760:CDS | 20.0% |
!! | GAAAAGATTTAAACATAACT+AGG | + | chr5_3:14272464-14272483 | Msa0800760:intron | 20.0% |
!!! | ATTGTGGTATATATTTTTTG+TGG | + | chr5_3:14272544-14272563 | Msa0800760:intron | 20.0% |
!!! | TCTAATTCTATTTTGTTTTG+TGG | - | chr5_3:14273007-14273026 | None:intergenic | 20.0% |
!! | AATCAAAACTTGAAACATAT+TGG | + | chr5_3:14273391-14273410 | Msa0800760:intron | 20.0% |
!!! | GTCATTTTATTATTATTGAG+AGG | + | chr5_3:14273560-14273579 | Msa0800760:intron | 20.0% |
!! | TTACAAAATTAAACAAAAGC+TGG | - | chr5_3:14273606-14273625 | None:intergenic | 20.0% |
!! | AATGGAAATATCAAAAAGAA+AGG | + | chr5_3:14273758-14273777 | Msa0800760:intron | 20.0% |
!!! | AAACATTTTCCCATTAAATT+AGG | - | chr5_3:14274047-14274066 | None:intergenic | 20.0% |
!! | TAATTTAATGGGAAAATGTT+TGG | + | chr5_3:14274046-14274065 | Msa0800760:intron | 20.0% |
!! | AATTTAATGGGAAAATGTTT+GGG | + | chr5_3:14274047-14274066 | Msa0800760:intron | 20.0% |
!!! | TTTTCAATGAAGTTTAGTAT+TGG | - | chr5_3:14274276-14274295 | None:intergenic | 20.0% |
!! | AATACTAAACTTCATTGAAA+AGG | + | chr5_3:14274275-14274294 | Msa0800760:CDS | 20.0% |
!!! | TTTTTTTCGTCATCAAAAAT+TGG | - | chr5_3:14275627-14275646 | None:intergenic | 20.0% |
!!! | ATTTTTGATGACGAAAAAAA+TGG | + | chr5_3:14275627-14275646 | Msa0800760:CDS | 20.0% |
!!! | TTTTTGATGACGAAAAAAAT+GGG | + | chr5_3:14275628-14275647 | Msa0800760:CDS | 20.0% |
!!! | AGGATTACACATATTTTTAA+CGG | + | chr5_3:14275696-14275715 | Msa0800760:CDS | 20.0% |
!! | TAAAGAAATATTCAACAGAT+TGG | + | chr5_3:14275830-14275849 | Msa0800760:CDS | 20.0% |
!! | ATTAAAAAAAAAGGAGCAAA+AGG | - | chr5_3:14276185-14276204 | None:intergenic | 20.0% |
!!! | TTTTGCTCCTTTTTTTTTAA+TGG | + | chr5_3:14276184-14276203 | Msa0800760:intron | 20.0% |
!! | TGATGTTCCATTAAAAAAAA+AGG | - | chr5_3:14276194-14276213 | None:intergenic | 20.0% |
!! | TTCAAATTAGCTAATATTGT+TGG | - | chr5_3:14276574-14276593 | None:intergenic | 20.0% |
!!! | TTCTTTATGATTTGTAAAAC+TGG | + | chr5_3:14276728-14276747 | Msa0800760:intron | 20.0% |
!!! | TCTTTATGATTTGTAAAACT+GGG | + | chr5_3:14276729-14276748 | Msa0800760:intron | 20.0% |
!!! | AGACACATATTTTATTACAT+AGG | + | chr5_3:14277067-14277086 | Msa0800760:intron | 20.0% |
!! | TAAAAAATTCATTCCAATCA+TGG | + | chr5_3:14277291-14277310 | Msa0800760:CDS | 20.0% |
!! | TTAAAAATGCAAAGGATTTA+AGG | + | chr5_3:14277389-14277408 | Msa0800760:intron | 20.0% |
!! | CCTGATAAAAAATAAATTGT+GGG | - | chr5_3:14277603-14277622 | None:intergenic | 20.0% |
!! | TTGAATATTTAGGTATTATC+TGG | + | chr5_3:14278042-14278061 | Msa0800760:intron | 20.0% |
!! | TAAACAAATTACCAAAAGAT+GGG | - | chr5_3:14279067-14279086 | None:intergenic | 20.0% |
!! | ATAAACAAATTACCAAAAGA+TGG | - | chr5_3:14279068-14279087 | None:intergenic | 20.0% |
!!! | AATCAATATGCAATTTTGTT+TGG | + | chr5_3:14279694-14279713 | Msa0800760:three_prime_UTR | 20.0% |
! | TACCAACAAATTGAAAACAA+TGG | - | chr5_3:14269122-14269141 | None:intergenic | 25.0% |
!!! | TTGGTTTTTGACTATCTTTA+TGG | + | chr5_3:14269475-14269494 | Msa0800760:intron | 25.0% |
! | TTTATCTTCTACATTGTGTT+TGG | + | chr5_3:14269592-14269611 | Msa0800760:intron | 25.0% |
! | AGAAAACAAACAACAAGAAA+AGG | - | chr5_3:14269674-14269693 | None:intergenic | 25.0% |
! | TTTGCAATTAAAGAAATGTC+TGG | + | chr5_3:14269732-14269751 | Msa0800760:intron | 25.0% |
! | ACAACATAAGTATCTTTAGA+TGG | - | chr5_3:14269783-14269802 | None:intergenic | 25.0% |
!! | AAGATTTTCCTACTTAGTAA+TGG | + | chr5_3:14269808-14269827 | Msa0800760:intron | 25.0% |
!! | AGATTTTCCTACTTAGTAAT+GGG | + | chr5_3:14269809-14269828 | Msa0800760:intron | 25.0% |
! | TAGATAAAGTTCTCTTTATG+TGG | + | chr5_3:14269842-14269861 | Msa0800760:intron | 25.0% |
! | TTATATAACACTGATCATGA+AGG | - | chr5_3:14270101-14270120 | None:intergenic | 25.0% |
!! | ATCGAAATTTCTTAATTTGG+CGG | + | chr5_3:14270322-14270341 | Msa0800760:CDS | 25.0% |
! | GAAATAATGACAAGAACTTA+TGG | + | chr5_3:14270419-14270438 | Msa0800760:CDS | 25.0% |
! | AATACTTTCCTATATCCATT+TGG | - | chr5_3:14270449-14270468 | None:intergenic | 25.0% |
!!! | TTTTATTTTATTGACTGCAG+GGG | + | chr5_3:14270548-14270567 | Msa0800760:intron | 25.0% |
!!! | GATAATTTTGACTAATCTGA+CGG | + | chr5_3:14270628-14270647 | Msa0800760:intron | 25.0% |
! | GTAAGTTTAGGAAAAATGAA+TGG | - | chr5_3:14270711-14270730 | None:intergenic | 25.0% |
! | AATGAGATTTAGGTAGTATT+TGG | + | chr5_3:14270740-14270759 | Msa0800760:intron | 25.0% |
! | TTGGTAGATTGATTAGAATA+TGG | + | chr5_3:14270759-14270778 | Msa0800760:intron | 25.0% |
! | ATATGGCGTAGTATAATATA+TGG | + | chr5_3:14270776-14270795 | Msa0800760:intron | 25.0% |
! | TATGGAGTCTGTTATATATT+TGG | + | chr5_3:14270794-14270813 | Msa0800760:intron | 25.0% |
!!! | TATATTTGGTGCATCTTAAA+AGG | + | chr5_3:14270808-14270827 | Msa0800760:intron | 25.0% |
!!! | ATATTTGGTGCATCTTAAAA+GGG | + | chr5_3:14270809-14270828 | Msa0800760:intron | 25.0% |
! | ATAGTATAATGTAAGGAAAG+TGG | + | chr5_3:14270841-14270860 | Msa0800760:intron | 25.0% |
!!! | CATAACTCTAAAGTAATGTT+TGG | - | chr5_3:14270922-14270941 | None:intergenic | 25.0% |
!!! | CAAACATTACTTTAGAGTTA+TGG | + | chr5_3:14270920-14270939 | Msa0800760:intron | 25.0% |
!!! | TCGAAAATTGATGATTTTGT+AGG | - | chr5_3:14270950-14270969 | None:intergenic | 25.0% |
! | ACTTTCAATTTGAGCTAATT+AGG | + | chr5_3:14270969-14270988 | Msa0800760:intron | 25.0% |
! | TGAATATGGAACATGTATTT+CGG | - | chr5_3:14271225-14271244 | None:intergenic | 25.0% |
!!! | GAAGTCATAGTTATTTTGTA+TGG | + | chr5_3:14271425-14271444 | Msa0800760:intron | 25.0% |
! | ATGTCTCCTTTACAAAAATT+TGG | + | chr5_3:14271453-14271472 | Msa0800760:intron | 25.0% |
! | TGTCTCCTTTACAAAAATTT+GGG | + | chr5_3:14271454-14271473 | Msa0800760:intron | 25.0% |
!! | TCAATCCCAAATTTTTGTAA+AGG | - | chr5_3:14271462-14271481 | None:intergenic | 25.0% |
!! | ATTGATTGAAGTACCTTATT+GGG | - | chr5_3:14271514-14271533 | None:intergenic | 25.0% |
! | TTCAATATCAACAACTTTGA+AGG | - | chr5_3:14271581-14271600 | None:intergenic | 25.0% |
! | TCAAAGTTGTTGATATTGAA+AGG | + | chr5_3:14271581-14271600 | Msa0800760:CDS | 25.0% |
!!! | TCATAAGCTTTTAAGTCAAT+TGG | + | chr5_3:14272135-14272154 | Msa0800760:CDS | 25.0% |
!!! | TTTTAAGTCAATTGGCTATT+AGG | + | chr5_3:14272143-14272162 | Msa0800760:CDS | 25.0% |
! | CTTAAATTCAAGATATATGC+AGG | - | chr5_3:14272241-14272260 | None:intergenic | 25.0% |
! | CTGCATATATCTTGAATTTA+AGG | + | chr5_3:14272239-14272258 | Msa0800760:CDS | 25.0% |
! | TACCATACAAAAATCGTTTA+TGG | - | chr5_3:14272411-14272430 | None:intergenic | 25.0% |
! | GAAGCATAAAACAAAGTATA+TGG | + | chr5_3:14272670-14272689 | Msa0800760:intron | 25.0% |
! | ATATGGAATACAAATTTAGC+AGG | + | chr5_3:14272687-14272706 | Msa0800760:intron | 25.0% |
! | AGAGCATAAAATAATACTCT+GGG | + | chr5_3:14272743-14272762 | Msa0800760:intron | 25.0% |
! | AAATAAAAAAGGGAATGCTT+TGG | + | chr5_3:14272825-14272844 | Msa0800760:intron | 25.0% |
! | AATAAAAAAGGGAATGCTTT+GGG | + | chr5_3:14272826-14272845 | Msa0800760:intron | 25.0% |
! | AATTATCCTTTAAGTATGTG+TGG | - | chr5_3:14272863-14272882 | None:intergenic | 25.0% |
! | TCAAATATGAGAAGATTACA+TGG | + | chr5_3:14272971-14272990 | Msa0800760:intron | 25.0% |
! | AATATGATTAGAGAGAAGAT+TGG | + | chr5_3:14273027-14273046 | Msa0800760:intron | 25.0% |
! | ATATGATTAGAGAGAAGATT+GGG | + | chr5_3:14273028-14273047 | Msa0800760:intron | 25.0% |
!! | TCTATCATCTTTTCTACAAT+GGG | - | chr5_3:14273060-14273079 | None:intergenic | 25.0% |
!! | TTCTATCATCTTTTCTACAA+TGG | - | chr5_3:14273061-14273080 | None:intergenic | 25.0% |
! | TTAACAATAAAAGTAACCGT+TGG | - | chr5_3:14273526-14273545 | None:intergenic | 25.0% |
!!! | TTGGTTTTTGGAAATAACAA+GGG | + | chr5_3:14273730-14273749 | Msa0800760:intron | 25.0% |
! | AGAGATATATAGTCTATCTT+TGG | + | chr5_3:14273968-14273987 | Msa0800760:intron | 25.0% |
! | ATAAAATCGTGTCATGTATT+TGG | - | chr5_3:14273995-14274014 | None:intergenic | 25.0% |
!! | AAATACATGACACGATTTTA+TGG | + | chr5_3:14273994-14274013 | Msa0800760:intron | 25.0% |
!! | ATTAGAAATTTTACCTGCTT+TGG | - | chr5_3:14274501-14274520 | None:intergenic | 25.0% |
! | AGCAGGTAAAATTTCTAATT+TGG | + | chr5_3:14274502-14274521 | Msa0800760:intron | 25.0% |
! | TCAAGTAACATACTTATTGT+TGG | + | chr5_3:14274575-14274594 | Msa0800760:intron | 25.0% |
! | CTCAAAGAGAAACAAAATAA+GGG | + | chr5_3:14274856-14274875 | Msa0800760:CDS | 25.0% |
!!! | ATTGTTACTCTTTTTCATAG+CGG | - | chr5_3:14274950-14274969 | None:intergenic | 25.0% |
! | GATAACAATGATTTATTGCA+AGG | + | chr5_3:14274982-14275001 | Msa0800760:CDS | 25.0% |
! | AAATTAAATGAAGAAGATGC+TGG | + | chr5_3:14275093-14275112 | Msa0800760:CDS | 25.0% |
! | ACCAATGATATTAATGATCT+TGG | + | chr5_3:14275564-14275583 | Msa0800760:CDS | 25.0% |
! | TCCAAGATCATTAATATCAT+TGG | - | chr5_3:14275568-14275587 | None:intergenic | 25.0% |
!!! | AATAGTGGATTTAGTTTTGA+TGG | + | chr5_3:14275795-14275814 | Msa0800760:CDS | 25.0% |
!! | TTTTTGTGAAATGTGTATCA+TGG | - | chr5_3:14275872-14275891 | None:intergenic | 25.0% |
! | ATGATACACATTTCACAAAA+AGG | + | chr5_3:14275871-14275890 | Msa0800760:CDS | 25.0% |
!! | AATTCGCCTTTTATAATGTT+GGG | - | chr5_3:14275960-14275979 | None:intergenic | 25.0% |
! | AAATGAAAAACCTAGAAGTT+TGG | - | chr5_3:14276144-14276163 | None:intergenic | 25.0% |
! | ATCATAGAACTAATGTGAAA+CGG | + | chr5_3:14276410-14276429 | Msa0800760:intron | 25.0% |
!! | AAAATGCAAGGAACAATTTT+TGG | - | chr5_3:14276777-14276796 | None:intergenic | 25.0% |
! | AGAAGATAAAAGAAAATGCA+AGG | - | chr5_3:14276789-14276808 | None:intergenic | 25.0% |
!!! | AAGTTTTTGGTCAATCTAAT+TGG | + | chr5_3:14276815-14276834 | Msa0800760:intron | 25.0% |
! | TAGTTTGACAGCAAATTATT+AGG | - | chr5_3:14276913-14276932 | None:intergenic | 25.0% |
! | TTGTTTCAGAATTGATATCT+AGG | + | chr5_3:14276937-14276956 | Msa0800760:intron | 25.0% |
! | TGTTTCAGAATTGATATCTA+GGG | + | chr5_3:14276938-14276957 | Msa0800760:intron | 25.0% |
! | ATTTCTTACTGATAGTATCA+GGG | - | chr5_3:14277237-14277256 | None:intergenic | 25.0% |
!! | TTTTGAACATCATTGCATTT+TGG | + | chr5_3:14277349-14277368 | Msa0800760:intron | 25.0% |
!!! | AATCCTTTGCATTTTTAACT+AGG | - | chr5_3:14277387-14277406 | None:intergenic | 25.0% |
!!! | CCCACAATTTATTTTTTATC+AGG | + | chr5_3:14277600-14277619 | Msa0800760:intron | 25.0% |
! | GCCTGATAAAAAATAAATTG+TGG | - | chr5_3:14277604-14277623 | None:intergenic | 25.0% |
! | CAGAAACTAGTTGAATATTT+AGG | + | chr5_3:14278032-14278051 | Msa0800760:intron | 25.0% |
! | ATGCATTAATTGCATATGAT+GGG | - | chr5_3:14278119-14278138 | None:intergenic | 25.0% |
! | AATGCATTAATTGCATATGA+TGG | - | chr5_3:14278120-14278139 | None:intergenic | 25.0% |
! | ATATGCAATTAATGCATTAC+AGG | + | chr5_3:14278122-14278141 | Msa0800760:intron | 25.0% |
! | AAAATTCTGAATCCTTTAGA+AGG | + | chr5_3:14278281-14278300 | Msa0800760:CDS | 25.0% |
!! | TTATAAGATTTTGTGATGCA+TGG | - | chr5_3:14278436-14278455 | None:intergenic | 25.0% |
! | TGAGATATAGTTTCATAAGT+AGG | - | chr5_3:14278462-14278481 | None:intergenic | 25.0% |
! | TACTTATGAAACTATATCTC+AGG | + | chr5_3:14278461-14278480 | Msa0800760:intron | 25.0% |
!!! | TTTTAGGTACCATGTATTTT+AGG | + | chr5_3:14278717-14278736 | Msa0800760:intron | 25.0% |
! | AAATTGACACCTAAAATACA+TGG | - | chr5_3:14278729-14278748 | None:intergenic | 25.0% |
!! | TAAGAAAAAGGCTTTAATCA+AGG | - | chr5_3:14278793-14278812 | None:intergenic | 25.0% |
! | TTAAAGGAAAATGCAATATG+TGG | - | chr5_3:14279091-14279110 | None:intergenic | 25.0% |
! | AACATTTATATAATCTCACC+TGG | - | chr5_3:14279220-14279239 | None:intergenic | 25.0% |
!! | TTTTTCATGTTTGTGCATTT+TGG | + | chr5_3:14279238-14279257 | Msa0800760:intron | 25.0% |
! | CTAACAAACAATTGTTTACA+TGG | + | chr5_3:14279599-14279618 | Msa0800760:three_prime_UTR | 25.0% |
! | CTCCATTGTTTTCAATTTGT+TGG | + | chr5_3:14269117-14269136 | Msa0800760:intron | 30.0% |
GAAAATTGCCATTAACTGTT+TGG | + | chr5_3:14269169-14269188 | Msa0800760:intron | 30.0% | |
! | GTTTCAGTGTTTGTTGATAT+TGG | + | chr5_3:14269206-14269225 | Msa0800760:CDS | 30.0% |
!! | TACTTGAAAGTAGTTGATGA+TGG | + | chr5_3:14269236-14269255 | Msa0800760:intron | 30.0% |
ATCTTTATGGTTTCGATGAA+TGG | + | chr5_3:14269488-14269507 | Msa0800760:intron | 30.0% | |
TCTTTATGGTTTCGATGAAT+GGG | + | chr5_3:14269489-14269508 | Msa0800760:intron | 30.0% | |
TAGAAGATAAAGAACCAAGA+AGG | - | chr5_3:14269583-14269602 | None:intergenic | 30.0% | |
!! | ATTGTGTTTGGATTTGTTGA+TGG | + | chr5_3:14269604-14269623 | Msa0800760:intron | 30.0% |
TGAAGATATGTTCTGATTGA+AGG | + | chr5_3:14269756-14269775 | Msa0800760:intron | 30.0% | |
GAAGATATGTTCTGATTGAA+GGG | + | chr5_3:14269757-14269776 | Msa0800760:intron | 30.0% | |
AGAACTTTATCTAGTTACTC+TGG | - | chr5_3:14269835-14269854 | None:intergenic | 30.0% | |
TATTAGATAGTAAAGGCAAC+TGG | + | chr5_3:14270157-14270176 | Msa0800760:intron | 30.0% | |
ATTAGATAGTAAAGGCAACT+GGG | + | chr5_3:14270158-14270177 | Msa0800760:intron | 30.0% | |
TATGCATACACCATAATCAA+TGG | - | chr5_3:14270286-14270305 | None:intergenic | 30.0% | |
TAATGACAAGAACTTATGGA+CGG | + | chr5_3:14270423-14270442 | Msa0800760:CDS | 30.0% | |
!! | TGGATATAGGAAAGTATTGA+AGG | + | chr5_3:14270451-14270470 | Msa0800760:CDS | 30.0% |
!! | TATAGGAAAGTATTGAAGGT+AGG | + | chr5_3:14270455-14270474 | Msa0800760:intron | 30.0% |
!! | ATAGGAAAGTATTGAAGGTA+GGG | + | chr5_3:14270456-14270475 | Msa0800760:intron | 30.0% |
AATGGCATTTGTGCATTAAT+TGG | - | chr5_3:14270693-14270712 | None:intergenic | 30.0% | |
ATTCAACAGCATGTAAGTTT+AGG | - | chr5_3:14270723-14270742 | None:intergenic | 30.0% | |
!! | TATTTGGTGCATCTTAAAAG+GGG | + | chr5_3:14270810-14270829 | Msa0800760:intron | 30.0% |
! | GATAGTTATTCTGTGTTTTG+TGG | + | chr5_3:14270999-14271018 | Msa0800760:intron | 30.0% |
! | TTTTGTGGCTCTTTCATTTA+GGG | + | chr5_3:14271014-14271033 | Msa0800760:intron | 30.0% |
TAAGATTGATTATCAAGTGC+AGG | - | chr5_3:14271146-14271165 | None:intergenic | 30.0% | |
GTTCCATATTCATTGCATTT+AGG | + | chr5_3:14271233-14271252 | Msa0800760:intron | 30.0% | |
TCACCTAAATGCAATGAATA+TGG | - | chr5_3:14271239-14271258 | None:intergenic | 30.0% | |
!! | TGATGATGACTACTTTTATC+TGG | + | chr5_3:14271275-14271294 | Msa0800760:intron | 30.0% |
CAGAAAACATATCACTTGTA+CGG | - | chr5_3:14271406-14271425 | None:intergenic | 30.0% | |
! | TTGATTGAAGTACCTTATTG+GGG | - | chr5_3:14271513-14271532 | None:intergenic | 30.0% |
! | GATTGATTGAAGTACCTTAT+TGG | - | chr5_3:14271515-14271534 | None:intergenic | 30.0% |
! | CAACTTTGAAGGAGATATTT+GGG | - | chr5_3:14271570-14271589 | None:intergenic | 30.0% |
! | ACAACTTTGAAGGAGATATT+TGG | - | chr5_3:14271571-14271590 | None:intergenic | 30.0% |
GTTCATATTGTCTACATGTA+GGG | - | chr5_3:14271668-14271687 | None:intergenic | 30.0% | |
AGTTCATATTGTCTACATGT+AGG | - | chr5_3:14271669-14271688 | None:intergenic | 30.0% | |
! | CGTTTTCAACTTCTAATTCA+TGG | - | chr5_3:14271767-14271786 | None:intergenic | 30.0% |
AACGATATCATAAAGCTTAC+TGG | + | chr5_3:14271783-14271802 | Msa0800760:CDS | 30.0% | |
TAGAAACACACCAAAAGTTA+GGG | - | chr5_3:14271928-14271947 | None:intergenic | 30.0% | |
ATAGAAACACACCAAAAGTT+AGG | - | chr5_3:14271929-14271948 | None:intergenic | 30.0% | |
! | TGTTTCTATATTTGCTTTGC+AGG | + | chr5_3:14271940-14271959 | Msa0800760:intron | 30.0% |
TGACTTAAAAGCTTATGAAC+AGG | - | chr5_3:14272133-14272152 | None:intergenic | 30.0% | |
AGCTCAAAACATATAAAGAG+CGG | - | chr5_3:14272270-14272289 | None:intergenic | 30.0% | |
! | GTCCATAAACGATTTTTGTA+TGG | + | chr5_3:14272406-14272425 | Msa0800760:intron | 30.0% |
ACATAAATGGAATCTAGAGA+AGG | - | chr5_3:14272512-14272531 | None:intergenic | 30.0% | |
TACTACTTCAAGCACATAAA+TGG | - | chr5_3:14272525-14272544 | None:intergenic | 30.0% | |
ATTCTTGCAGAGGTAAAATA+TGG | + | chr5_3:14272720-14272739 | Msa0800760:intron | 30.0% | |
! | GAGAGCATAAAATAATACTC+TGG | + | chr5_3:14272742-14272761 | Msa0800760:intron | 30.0% |
ACCAAGCAAGCAAATAAAAA+AGG | + | chr5_3:14272814-14272833 | Msa0800760:intron | 30.0% | |
CCAAGCAAGCAAATAAAAAA+GGG | + | chr5_3:14272815-14272834 | Msa0800760:intron | 30.0% | |
TCTATACCACACATACTTAA+AGG | + | chr5_3:14272854-14272873 | Msa0800760:intron | 30.0% | |
TTAATTGCATAAGCCATTAC+AGG | - | chr5_3:14272904-14272923 | None:intergenic | 30.0% | |
! | TGAAGAAATGTTGGTAAAGA+AGG | + | chr5_3:14273108-14273127 | Msa0800760:intron | 30.0% |
AGTTCAATAGTTAGAAGTAG+AGG | + | chr5_3:14273148-14273167 | Msa0800760:intron | 30.0% | |
GTTCAATAGTTAGAAGTAGA+GGG | + | chr5_3:14273149-14273168 | Msa0800760:intron | 30.0% | |
ACTATAGGTCAAACCATTAA+AGG | + | chr5_3:14273184-14273203 | Msa0800760:intron | 30.0% | |
CTATAGGTCAAACCATTAAA+GGG | + | chr5_3:14273185-14273204 | Msa0800760:intron | 30.0% | |
GAAAATGTGAAGAGAGAAAT+AGG | + | chr5_3:14273226-14273245 | Msa0800760:intron | 30.0% | |
AGAGAAAGAAGTGAGAAATA+GGG | + | chr5_3:14273268-14273287 | Msa0800760:intron | 30.0% | |
GGAAGATTTGATGTATTGTT+TGG | + | chr5_3:14273289-14273308 | Msa0800760:intron | 30.0% | |
CCAAAAACCAACAACAATAA+AGG | - | chr5_3:14273721-14273740 | None:intergenic | 30.0% | |
!!! | CCTTTATTGTTGTTGGTTTT+TGG | + | chr5_3:14273718-14273737 | Msa0800760:intron | 30.0% |
!!! | GTTGGTTTTTGGAAATAACA+AGG | + | chr5_3:14273729-14273748 | Msa0800760:intron | 30.0% |
!! | TGGTTTTTGGAAATAACAAG+GGG | + | chr5_3:14273731-14273750 | Msa0800760:intron | 30.0% |
TCTCTAATTAGCGAAGAAAT+GGG | - | chr5_3:14273793-14273812 | None:intergenic | 30.0% | |
TTCTCTAATTAGCGAAGAAA+TGG | - | chr5_3:14273794-14273813 | None:intergenic | 30.0% | |
TTTGGTATGCAAAGAAATAG+GGG | - | chr5_3:14273859-14273878 | None:intergenic | 30.0% | |
GTTTGGTATGCAAAGAAATA+GGG | - | chr5_3:14273860-14273879 | None:intergenic | 30.0% | |
TGTTTGGTATGCAAAGAAAT+AGG | - | chr5_3:14273861-14273880 | None:intergenic | 30.0% | |
GATACTACATTTCTTCTGTT+TGG | - | chr5_3:14273877-14273896 | None:intergenic | 30.0% | |
ATATAGTACTTCGTGTAATC+TGG | + | chr5_3:14274099-14274118 | Msa0800760:intron | 30.0% | |
TATAGTACTTCGTGTAATCT+GGG | + | chr5_3:14274100-14274119 | Msa0800760:intron | 30.0% | |
ACATAAAATCCAACAAGGAA+CGG | + | chr5_3:14274129-14274148 | Msa0800760:intron | 30.0% | |
GCAAACAATCAAATTTGTGT+AGG | - | chr5_3:14274225-14274244 | None:intergenic | 30.0% | |
ATCTTCTTGAACCATATAAG+TGG | - | chr5_3:14274447-14274466 | None:intergenic | 30.0% | |
ATCAGACTTAATCACAGTAA+TGG | - | chr5_3:14274546-14274565 | None:intergenic | 30.0% | |
CAATTGTATAATTGCTACGT+AGG | + | chr5_3:14274616-14274635 | Msa0800760:intron | 30.0% | |
TACAGTAGATCATGTTAGTT+TGG | + | chr5_3:14274640-14274659 | Msa0800760:intron | 30.0% | |
CATGCAGATATATCAAAGTT+TGG | + | chr5_3:14274700-14274719 | Msa0800760:intron | 30.0% | |
!!! | CCTTATTTTGTTTCTCTTTG+AGG | - | chr5_3:14274858-14274877 | None:intergenic | 30.0% |
CCTCAAAGAGAAACAAAATA+AGG | + | chr5_3:14274855-14274874 | Msa0800760:CDS | 30.0% | |
AAAGAGAAACAAAATAAGGG+AGG | + | chr5_3:14274859-14274878 | Msa0800760:CDS | 30.0% | |
!!! | TTTTTTGCAACTTCTACACA+GGG | - | chr5_3:14275354-14275373 | None:intergenic | 30.0% |
!!! | TTTTTTTGCAACTTCTACAC+AGG | - | chr5_3:14275355-14275374 | None:intergenic | 30.0% |
! | ATTTTTAACGGCGAAGAAAA+TGG | + | chr5_3:14275708-14275727 | Msa0800760:CDS | 30.0% |
! | TTTTTAACGGCGAAGAAAAT+GGG | + | chr5_3:14275709-14275728 | Msa0800760:CDS | 30.0% |
AAATGTGTATCATGGAAATC+AGG | - | chr5_3:14275864-14275883 | None:intergenic | 30.0% | |
TACACATTTCACAAAAAGGT+CGG | + | chr5_3:14275875-14275894 | Msa0800760:CDS | 30.0% | |
!! | AAGGTCGGATATTTTAAATG+AGG | + | chr5_3:14275890-14275909 | Msa0800760:CDS | 30.0% |
! | TTACATTTTCTAACACACTC+AGG | - | chr5_3:14275933-14275952 | None:intergenic | 30.0% |
AACAGACCCAACATTATAAA+AGG | + | chr5_3:14275951-14275970 | Msa0800760:CDS | 30.0% | |
! | CAATTCGCCTTTTATAATGT+TGG | - | chr5_3:14275961-14275980 | None:intergenic | 30.0% |
CAACATTATAAAAGGCGAAT+TGG | + | chr5_3:14275959-14275978 | Msa0800760:CDS | 30.0% | |
TCCAATAGATCTTCATTGTT+GGG | - | chr5_3:14276292-14276311 | None:intergenic | 30.0% | |
TTCCAATAGATCTTCATTGT+TGG | - | chr5_3:14276293-14276312 | None:intergenic | 30.0% | |
TCAAGAGAAAAAACCACAAA+GGG | - | chr5_3:14276391-14276410 | None:intergenic | 30.0% | |
ATCAAGAGAAAAAACCACAA+AGG | - | chr5_3:14276392-14276411 | None:intergenic | 30.0% | |
TTCAACAAAATGATCCATTC+AGG | + | chr5_3:14276503-14276522 | Msa0800760:CDS | 30.0% | |
TCAACAAAATGATCCATTCA+GGG | + | chr5_3:14276504-14276523 | Msa0800760:CDS | 30.0% | |
AATATACTTGACATCTCTTC+TGG | + | chr5_3:14277181-14277200 | Msa0800760:CDS | 30.0% | |
CATTTCTTACTGATAGTATC+AGG | - | chr5_3:14277238-14277257 | None:intergenic | 30.0% | |
TGTCCTAGTTAAAAATGCAA+AGG | + | chr5_3:14277381-14277400 | Msa0800760:intron | 30.0% | |
TACTATGACACATCATTACA+AGG | + | chr5_3:14277417-14277436 | Msa0800760:intron | 30.0% | |
TAAACTGCTTGCGTTTAATA+TGG | + | chr5_3:14277982-14278001 | Msa0800760:intron | 30.0% | |
!! | TTTTGAAAGATGTTTCATGC+AGG | + | chr5_3:14278174-14278193 | Msa0800760:intron | 30.0% |
ATCAACTACTTCATAGTTAC+AGG | + | chr5_3:14278215-14278234 | Msa0800760:CDS | 30.0% | |
TCAACTACTTCATAGTTACA+GGG | + | chr5_3:14278216-14278235 | Msa0800760:CDS | 30.0% | |
!!! | ATTGTTTTGACTATCTTTGC+AGG | + | chr5_3:14278549-14278568 | Msa0800760:intron | 30.0% |
AGCATGACAGGTATATTTAA+AGG | - | chr5_3:14278663-14278682 | None:intergenic | 30.0% | |
! | TTGTTACTTACTGCTAATAG+TGG | + | chr5_3:14279495-14279514 | Msa0800760:three_prime_UTR | 30.0% |
TTTGGAAGCTTCACGAATAA+TGG | - | chr5_3:14268900-14268919 | None:intergenic | 35.0% | |
GATGAAGATGAGGAATTCTA+GGG | - | chr5_3:14268945-14268964 | None:intergenic | 35.0% | |
CGAAAACACCAAACAGTTAA+TGG | - | chr5_3:14269180-14269199 | None:intergenic | 35.0% | |
!!! | CTGTTTGGTGTTTTCGTTTT+AGG | + | chr5_3:14269184-14269203 | Msa0800760:intron | 35.0% |
ATAACACTGACACATTGACA+CGG | + | chr5_3:14269318-14269337 | Msa0800760:intron | 35.0% | |
!!! | GGTTTGTACTTTTTCCTTCT+TGG | + | chr5_3:14269566-14269585 | Msa0800760:intron | 35.0% |
ACAACAAGAAAAGGAACATG+CGG | - | chr5_3:14269665-14269684 | None:intergenic | 35.0% | |
TTTCTGAATGAAACAGTCTC+AGG | + | chr5_3:14269689-14269708 | Msa0800760:intron | 35.0% | |
! | ATCTAAAATGCAACAACGAG+TGG | + | chr5_3:14270215-14270234 | Msa0800760:intron | 35.0% |
! | TCTAAAATGCAACAACGAGT+GGG | + | chr5_3:14270216-14270235 | Msa0800760:intron | 35.0% |
AATGCTACGAGTGAAAACTT+CGG | + | chr5_3:14270350-14270369 | Msa0800760:CDS | 35.0% | |
CAACAAAGAGACTTCAGAAA+TGG | - | chr5_3:14270399-14270418 | None:intergenic | 35.0% | |
!! | CATTTCTGAAGTCTCTTTGT+TGG | + | chr5_3:14270397-14270416 | Msa0800760:CDS | 35.0% |
!! | TGGCATTGATGATGATAGAA+AGG | + | chr5_3:14270588-14270607 | Msa0800760:CDS | 35.0% |
GATGATGATAGAAAGGAAGT+AGG | + | chr5_3:14270595-14270614 | Msa0800760:CDS | 35.0% | |
CTCGTTTCATTGTTTCACTA+AGG | + | chr5_3:14270661-14270680 | Msa0800760:intron | 35.0% | |
CATGCTGTTGAATGAGATTT+AGG | + | chr5_3:14270730-14270749 | Msa0800760:intron | 35.0% | |
!!! | GCTTTTTAGTTCCACTGAAA+AGG | + | chr5_3:14270865-14270884 | Msa0800760:intron | 35.0% |
!!! | TTTTAGTTCCACTGAAAAGG+TGG | + | chr5_3:14270868-14270887 | Msa0800760:intron | 35.0% |
! | GTTTTGTGGCTCTTTCATTT+AGG | + | chr5_3:14271013-14271032 | Msa0800760:intron | 35.0% |
AAAGTAGTCATCATCAAGAC+AGG | - | chr5_3:14271271-14271290 | None:intergenic | 35.0% | |
TTTCACAGACAATGACTGAA+AGG | - | chr5_3:14271321-14271340 | None:intergenic | 35.0% | |
TATTCTACAACCAACCAGTT+CGG | + | chr5_3:14271341-14271360 | Msa0800760:CDS | 35.0% | |
AAAACATATCACTTGTACGG+TGG | - | chr5_3:14271403-14271422 | None:intergenic | 35.0% | |
CAATCAAGAAATGTGTGATG+CGG | + | chr5_3:14271530-14271549 | Msa0800760:CDS | 35.0% | |
TATCTTCTCTGCAAAACTTC+AGG | + | chr5_3:14271604-14271623 | Msa0800760:intron | 35.0% | |
AAGCTTACTGGATACATATC+AGG | + | chr5_3:14271795-14271814 | Msa0800760:CDS | 35.0% | |
ATGAATCACCTTCATATCCA+GGG | - | chr5_3:14271832-14271851 | None:intergenic | 35.0% | |
TATGAATCACCTTCATATCC+AGG | - | chr5_3:14271833-14271852 | None:intergenic | 35.0% | |
TCTCATCTCATTGTAACTTC+TGG | + | chr5_3:14271880-14271899 | Msa0800760:intron | 35.0% | |
CTCATCTCATTGTAACTTCT+GGG | + | chr5_3:14271881-14271900 | Msa0800760:intron | 35.0% | |
AGAAACACACCAAAAGTTAG+GGG | - | chr5_3:14271927-14271946 | None:intergenic | 35.0% | |
ATGGATACAGAGATACTGTA+AGG | - | chr5_3:14271966-14271985 | None:intergenic | 35.0% | |
TTTGTTCCTTGACTTTAACG+TGG | + | chr5_3:14272074-14272093 | Msa0800760:intron | 35.0% | |
ATCTAACCACGTTAAAGTCA+AGG | - | chr5_3:14272083-14272102 | None:intergenic | 35.0% | |
GAAAGCCAAAACAAAAAGAG+AGG | + | chr5_3:14272199-14272218 | Msa0800760:CDS | 35.0% | |
!! | ATCTGCCTCTCTTTTTGTTT+TGG | - | chr5_3:14272207-14272226 | None:intergenic | 35.0% |
TCAAAACATATAAAGAGCGG+GGG | - | chr5_3:14272267-14272286 | None:intergenic | 35.0% | |
CTCAAAACATATAAAGAGCG+GGG | - | chr5_3:14272268-14272287 | None:intergenic | 35.0% | |
GCTCAAAACATATAAAGAGC+GGG | - | chr5_3:14272269-14272288 | None:intergenic | 35.0% | |
TTGAATTCAAGGTAGTCTCT+TGG | + | chr5_3:14272311-14272330 | Msa0800760:intron | 35.0% | |
! | ATTTTTGTATGGTACACGAC+TGG | + | chr5_3:14272417-14272436 | Msa0800760:intron | 35.0% |
ATGAGAACATAGAAGAGAAG+TGG | + | chr5_3:14272442-14272461 | Msa0800760:intron | 35.0% | |
AAACATAACTAGGAGTTCCA+AGG | + | chr5_3:14272474-14272493 | Msa0800760:intron | 35.0% | |
AACATAACTAGGAGTTCCAA+GGG | + | chr5_3:14272475-14272494 | Msa0800760:intron | 35.0% | |
ATGTGCTTGAAGTAGTATTG+TGG | + | chr5_3:14272528-14272547 | Msa0800760:intron | 35.0% | |
GTGGATGATATTGCCTTAAT+TGG | + | chr5_3:14272563-14272582 | Msa0800760:intron | 35.0% | |
! | CCTTCTCGATTTTCCAATTA+AGG | - | chr5_3:14272579-14272598 | None:intergenic | 35.0% |
CCTTAATTGGAAAATCGAGA+AGG | + | chr5_3:14272576-14272595 | Msa0800760:intron | 35.0% | |
AAATCATGTGTGACATGACT+TGG | - | chr5_3:14272633-14272652 | None:intergenic | 35.0% | |
!!! | CCCTTTTTTATTTGCTTGCT+TGG | - | chr5_3:14272818-14272837 | None:intergenic | 35.0% |
! | TTACAGGTCTTATAACTGTG+TGG | - | chr5_3:14272888-14272907 | None:intergenic | 35.0% |
CACAGTTATAAGACCTGTAA+TGG | + | chr5_3:14272888-14272907 | Msa0800760:intron | 35.0% | |
AGATGATAGAATCTCGTCTT+AGG | + | chr5_3:14273070-14273089 | Msa0800760:intron | 35.0% | |
AAGCATGTGTGAAGAAATGT+TGG | + | chr5_3:14273099-14273118 | Msa0800760:intron | 35.0% | |
! | AAACCATTAAAGGGTGTGTT+TGG | + | chr5_3:14273194-14273213 | Msa0800760:intron | 35.0% |
AAACCAAACACACCCTTTAA+TGG | - | chr5_3:14273200-14273219 | None:intergenic | 35.0% | |
! | ATTAAAGGGTGTGTTTGGTT+TGG | + | chr5_3:14273199-14273218 | Msa0800760:intron | 35.0% |
GAGAGAAAGAAGTGAGAAAT+AGG | + | chr5_3:14273267-14273286 | Msa0800760:intron | 35.0% | |
TAAGTGGCCTTTATTGTTGT+TGG | + | chr5_3:14273711-14273730 | Msa0800760:intron | 35.0% | |
! | GAAATAACAAGGGGCATAAA+TGG | + | chr5_3:14273740-14273759 | Msa0800760:intron | 35.0% |
CTCTAATTAGCGAAGAAATG+GGG | - | chr5_3:14273792-14273811 | None:intergenic | 35.0% | |
TTAGAGAAGACCACAAAAAG+TGG | + | chr5_3:14273806-14273825 | Msa0800760:intron | 35.0% | |
GAAGTTGTGAAGAGAGAAAT+AGG | - | chr5_3:14273905-14273924 | None:intergenic | 35.0% | |
AGACAGACGACCTAATTTAA+TGG | + | chr5_3:14274034-14274053 | Msa0800760:intron | 35.0% | |
GACAGACGACCTAATTTAAT+GGG | + | chr5_3:14274035-14274054 | Msa0800760:intron | 35.0% | |
GGTGTACATAAAATCCAACA+AGG | + | chr5_3:14274124-14274143 | Msa0800760:intron | 35.0% | |
TCAAATTTGTGTAGGATGCA+GGG | - | chr5_3:14274217-14274236 | None:intergenic | 35.0% | |
ATCAAATTTGTGTAGGATGC+AGG | - | chr5_3:14274218-14274237 | None:intergenic | 35.0% | |
AAAAGGTCATCAAACAGTTC+TGG | + | chr5_3:14274292-14274311 | Msa0800760:CDS | 35.0% | |
AAAGGTCATCAAACAGTTCT+GGG | + | chr5_3:14274293-14274312 | Msa0800760:CDS | 35.0% | |
ATCAATAAGATGCAGTGAGA+GGG | - | chr5_3:14274342-14274361 | None:intergenic | 35.0% | |
TATCAATAAGATGCAGTGAG+AGG | - | chr5_3:14274343-14274362 | None:intergenic | 35.0% | |
!! | AACCATATAAGTGGCTTTGT+TGG | - | chr5_3:14274438-14274457 | None:intergenic | 35.0% |
CTAAACAATCCTTACGATCT+TGG | - | chr5_3:14274729-14274748 | None:intergenic | 35.0% | |
!! | TTCATTTAGCTTGTCTGAAG+TGG | - | chr5_3:14274764-14274783 | None:intergenic | 35.0% |
TCGATGTAAGTAATCAACAG+AGG | - | chr5_3:14274824-14274843 | None:intergenic | 35.0% | |
! | TCTGTTGATTACTTACATCG+AGG | + | chr5_3:14274823-14274842 | Msa0800760:CDS | 35.0% |
! | CTGTTGATTACTTACATCGA+GGG | + | chr5_3:14274824-14274843 | Msa0800760:CDS | 35.0% |
CAGTAAATTGCCAGAATAAC+CGG | - | chr5_3:14274899-14274918 | None:intergenic | 35.0% | |
!! | ATTGCAAGGAGTTCACTTTT+TGG | + | chr5_3:14274996-14275015 | Msa0800760:CDS | 35.0% |
GTGATCTGTGAATCATTTGA+AGG | + | chr5_3:14275117-14275136 | Msa0800760:CDS | 35.0% | |
TTCGGTTATGATGTAGAGAT+TGG | + | chr5_3:14275156-14275175 | Msa0800760:CDS | 35.0% | |
GTTATGATGTAGAGATTGGT+GGG | + | chr5_3:14275160-14275179 | Msa0800760:CDS | 35.0% | |
! | GTAGAGCAACTCTTTAGAAA+AGG | - | chr5_3:14275198-14275217 | None:intergenic | 35.0% |
TTGCTTACTCCAAAAGCTAT+CGG | - | chr5_3:14275283-14275302 | None:intergenic | 35.0% | |
!!! | TTTTGGAGTAAGCAAAACCT+AGG | + | chr5_3:14275288-14275307 | Msa0800760:CDS | 35.0% |
! | TTTGGAGTAAGCAAAACCTA+GGG | + | chr5_3:14275289-14275308 | Msa0800760:CDS | 35.0% |
! | CTGATTTTCTCGTAAAAGCA+TGG | + | chr5_3:14275394-14275413 | Msa0800760:CDS | 35.0% |
CTGAATACCATGAATCTAGA+GGG | - | chr5_3:14275437-14275456 | None:intergenic | 35.0% | |
!! | GTAACTTTGGTTCTGATGAT+CGG | + | chr5_3:14275469-14275488 | Msa0800760:CDS | 35.0% |
ATCGGTTATCAAACTCTGAA+TGG | + | chr5_3:14275487-14275506 | Msa0800760:CDS | 35.0% | |
TCATCAAAAATTGGTGTACG+AGG | - | chr5_3:14275618-14275637 | None:intergenic | 35.0% | |
! | AACATTTTCAGCTACGATCT+TGG | + | chr5_3:14275651-14275670 | Msa0800760:CDS | 35.0% |
ACTTCAGTTATGACATGTCA+AGG | + | chr5_3:14275736-14275755 | Msa0800760:CDS | 35.0% | |
! | ACCTCAAGTTTTGCAAATAG+TGG | + | chr5_3:14275780-14275799 | Msa0800760:CDS | 35.0% |
TCCACTATTTGCAAAACTTG+AGG | - | chr5_3:14275784-14275803 | None:intergenic | 35.0% | |
! | TATTCAACAGATTGGTTGAC+TGG | + | chr5_3:14275838-14275857 | Msa0800760:CDS | 35.0% |
TTCTAACACACTCAGGTAAT+AGG | - | chr5_3:14275926-14275945 | None:intergenic | 35.0% | |
! | AAGGCGAATTGGATCTTTTT+AGG | + | chr5_3:14275970-14275989 | Msa0800760:CDS | 35.0% |
CTTCTACTTCTATGAAATGG+AGG | - | chr5_3:14276047-14276066 | None:intergenic | 35.0% | |
CTCCATTTCATAGAAGTAGA+AGG | + | chr5_3:14276045-14276064 | Msa0800760:CDS | 35.0% | |
CTCCTTCTACTTCTATGAAA+TGG | - | chr5_3:14276050-14276069 | None:intergenic | 35.0% | |
CATTTCATAGAAGTAGAAGG+AGG | + | chr5_3:14276048-14276067 | Msa0800760:CDS | 35.0% | |
CCAATAGATCTTCATTGTTG+GGG | - | chr5_3:14276291-14276310 | None:intergenic | 35.0% | |
ACAGTTCATCAGCTTAAGTA+AGG | - | chr5_3:14276348-14276367 | None:intergenic | 35.0% | |
TACTTAAGCTGATGAACTGT+TGG | + | chr5_3:14276348-14276367 | Msa0800760:intron | 35.0% | |
ACTTAAGCTGATGAACTGTT+GGG | + | chr5_3:14276349-14276368 | Msa0800760:intron | 35.0% | |
AATTTCTAACTGACCCTTTG+TGG | + | chr5_3:14276375-14276394 | Msa0800760:intron | 35.0% | |
CAACAAAATGATCCATTCAG+GGG | + | chr5_3:14276505-14276524 | Msa0800760:CDS | 35.0% | |
AACCATGTCAAATATTGACC+TGG | + | chr5_3:14276609-14276628 | Msa0800760:intron | 35.0% | |
AACCAGGTCAATATTTGACA+TGG | - | chr5_3:14276614-14276633 | None:intergenic | 35.0% | |
TGTCAAATATTGACCTGGTT+TGG | + | chr5_3:14276614-14276633 | Msa0800760:intron | 35.0% | |
!! | ATATTGACCTGGTTTGGATT+CGG | + | chr5_3:14276620-14276639 | Msa0800760:intron | 35.0% |
! | ATCTTCTGTGCTGAAGTTTT+TGG | + | chr5_3:14276802-14276821 | Msa0800760:intron | 35.0% |
CCATTTATTCCCATAATCTC+CGG | - | chr5_3:14276976-14276995 | None:intergenic | 35.0% | |
GAGATTATGGGAATAAATGG+AGG | + | chr5_3:14276976-14276995 | Msa0800760:CDS | 35.0% | |
TCAAACTCCAGTTATGTTGT+CGG | + | chr5_3:14277010-14277029 | Msa0800760:intron | 35.0% | |
AAAAAGACCGACAACATAAC+TGG | - | chr5_3:14277020-14277039 | None:intergenic | 35.0% | |
!!! | ATGTTGTCGGTCTTTTTTTG+AGG | + | chr5_3:14277023-14277042 | Msa0800760:intron | 35.0% |
GGAGACATTCATTTGTATGT+TGG | + | chr5_3:14277088-14277107 | Msa0800760:intron | 35.0% | |
AAATTCATTCCAATCATGGC+TGG | + | chr5_3:14277295-14277314 | Msa0800760:CDS | 35.0% | |
AACAAAAAGACTAACCAGGA+GGG | - | chr5_3:14277498-14277517 | None:intergenic | 35.0% | |
ATGCAACAAAAAGACTAACC+AGG | - | chr5_3:14277502-14277521 | None:intergenic | 35.0% | |
AAACATCCAACTTTCCTGAA+GGG | - | chr5_3:14277888-14277907 | None:intergenic | 35.0% | |
TAAACATCCAACTTTCCTGA+AGG | - | chr5_3:14277889-14277908 | None:intergenic | 35.0% | |
!!! | TACTTTTTTTCACAGCATGC+TGG | + | chr5_3:14277921-14277940 | Msa0800760:intron | 35.0% |
! | AACTAGTTTCTGAGTCATAC+TGG | - | chr5_3:14278024-14278043 | None:intergenic | 35.0% |
!! | AGTAGTTGATAACCAATCTC+TGG | - | chr5_3:14278205-14278224 | None:intergenic | 35.0% |
ACAGGGAACAGATTAAAGAT+TGG | + | chr5_3:14278233-14278252 | Msa0800760:CDS | 35.0% | |
CAGGGAACAGATTAAAGATT+GGG | + | chr5_3:14278234-14278253 | Msa0800760:CDS | 35.0% | |
AGGGAACAGATTAAAGATTG+GGG | + | chr5_3:14278235-14278254 | Msa0800760:CDS | 35.0% | |
CTGTGAGATATACCTTCTAA+AGG | - | chr5_3:14278296-14278315 | None:intergenic | 35.0% | |
! | CTTTAGAAGGTATATCTCAC+AGG | + | chr5_3:14278294-14278313 | Msa0800760:intron | 35.0% |
! | AAGATTTTGTGATGCATGGA+TGG | - | chr5_3:14278432-14278451 | None:intergenic | 35.0% |
TGACTATCTTTGCAGGAATT+TGG | + | chr5_3:14278556-14278575 | Msa0800760:intron | 35.0% | |
! | ATGAAAAGCAAAAGCATGAC+AGG | - | chr5_3:14278675-14278694 | None:intergenic | 35.0% |
!!! | TCTTTTAGAGTTTCTTCAGC+AGG | + | chr5_3:14278761-14278780 | Msa0800760:CDS | 35.0% |
! | CTCTGCACGATTTTGAATTT+AGG | - | chr5_3:14278936-14278955 | None:intergenic | 35.0% |
CTAAATTCAAAATCGTGCAG+AGG | + | chr5_3:14278934-14278953 | Msa0800760:CDS | 35.0% | |
TGGTTGTAGCTAGTAAGATT+AGG | - | chr5_3:14278966-14278985 | None:intergenic | 35.0% | |
! | GCACAAAAATTCCCATCTTT+TGG | + | chr5_3:14279053-14279072 | Msa0800760:intron | 35.0% |
TCTTAAGGTGCGATTATGTT+TGG | + | chr5_3:14279128-14279147 | Msa0800760:intron | 35.0% | |
CTTAAGGTGCGATTATGTTT+GGG | + | chr5_3:14279129-14279148 | Msa0800760:intron | 35.0% | |
TTAAGGTGCGATTATGTTTG+GGG | + | chr5_3:14279130-14279149 | Msa0800760:intron | 35.0% | |
!! | CTTTAGCTCTTCAACTAGAA+GGG | - | chr5_3:14279180-14279199 | None:intergenic | 35.0% |
! | TCATGTTTGTGCATTTTGGA+AGG | + | chr5_3:14279242-14279261 | Msa0800760:intron | 35.0% |
CATAATCAAATAGCCAAGCT+TGG | + | chr5_3:14279352-14279371 | Msa0800760:CDS | 35.0% | |
TTAGCAGTAAGTAACAACCA+TGG | - | chr5_3:14279492-14279511 | None:intergenic | 35.0% | |
! | TGATTGAAACGTCGACGTTT+TGG | - | chr5_3:14268918-14268937 | None:intergenic | 40.0% |
CGATGAAGATGAGGAATTCT+AGG | - | chr5_3:14268946-14268965 | None:intergenic | 40.0% | |
CTACGAACAGATTCCGATAA+AGG | - | chr5_3:14269005-14269024 | None:intergenic | 40.0% | |
!! | TATTATTCAAGCACCGACAC+CGG | + | chr5_3:14269286-14269305 | Msa0800760:intron | 40.0% |
CAATGTGTCAGTGTTATGTC+CGG | - | chr5_3:14269315-14269334 | None:intergenic | 40.0% | |
TAACACTGACACATTGACAC+GGG | + | chr5_3:14269319-14269338 | Msa0800760:intron | 40.0% | |
! | GCACTGACACTTCATATTGA+AGG | - | chr5_3:14269410-14269429 | None:intergenic | 40.0% |
! | GTTTCGATGAATGGGTTTGT+AGG | + | chr5_3:14269497-14269516 | Msa0800760:intron | 40.0% |
GAATTGGTGGGAGAAAGATA+TGG | + | chr5_3:14269545-14269564 | Msa0800760:CDS | 40.0% | |
ACGTGCTCAACTTTCTTTAG+TGG | + | chr5_3:14270003-14270022 | Msa0800760:intron | 40.0% | |
GCTCAACTTTCTTTAGTGGT+TGG | + | chr5_3:14270007-14270026 | Msa0800760:intron | 40.0% | |
! | ACAACGAGTGGGTTTCTATA+AGG | + | chr5_3:14270227-14270246 | Msa0800760:intron | 40.0% |
! | TTCCTTGCTGCCATTGATTA+TGG | + | chr5_3:14270273-14270292 | Msa0800760:intron | 40.0% |
! | AGTGAAAACTTCGGTTTTCG+TGG | + | chr5_3:14270359-14270378 | Msa0800760:CDS | 40.0% |
GGGTGCAAGTGTATATATCT+TGG | + | chr5_3:14270568-14270587 | Msa0800760:CDS | 40.0% | |
! | CTTTCATTCCACCTTTTCAG+TGG | - | chr5_3:14270879-14270898 | None:intergenic | 40.0% |
GATTGATTATCAAGTGCAGG+AGG | - | chr5_3:14271143-14271162 | None:intergenic | 40.0% | |
TCATAATCTCTCTTCCACAC+CGG | + | chr5_3:14271194-14271213 | Msa0800760:intron | 40.0% | |
AACATGTATTTCGGATTGCC+CGG | - | chr5_3:14271216-14271235 | None:intergenic | 40.0% | |
AAGAGAAAAGCAACCTGGAT+TGG | - | chr5_3:14271378-14271397 | None:intergenic | 40.0% | |
GATGAATTCCGTCTCTGAAT+TGG | + | chr5_3:14271484-14271503 | Msa0800760:intron | 40.0% | |
!! | TTCATATCCAGGGTATTGCA+AGG | - | chr5_3:14271822-14271841 | None:intergenic | 40.0% |
TTGCAATACCCTGGATATGA+AGG | + | chr5_3:14271821-14271840 | Msa0800760:CDS | 40.0% | |
TCTCATTGTAACTTCTGGGT+TGG | + | chr5_3:14271885-14271904 | Msa0800760:intron | 40.0% | |
TTCAAGATATATGCAGGGCA+TGG | - | chr5_3:14272235-14272254 | None:intergenic | 40.0% | |
AAGTTAGAGACATGGACTCA+TGG | + | chr5_3:14272605-14272624 | Msa0800760:intron | 40.0% | |
AGAGACACAAATTCTTGCAG+AGG | + | chr5_3:14272710-14272729 | Msa0800760:intron | 40.0% | |
TCTGGGTTCATCATACAAAG+TGG | + | chr5_3:14272760-14272779 | Msa0800760:intron | 40.0% | |
GGTTCATCATACAAAGTGGT+GGG | + | chr5_3:14272764-14272783 | Msa0800760:intron | 40.0% | |
GTTCATCATACAAAGTGGTG+GGG | + | chr5_3:14272765-14272784 | Msa0800760:intron | 40.0% | |
ATAGAGGAAATGTCAGCCAT+AGG | + | chr5_3:14272790-14272809 | Msa0800760:intron | 40.0% | |
ATTTGCTTGCTTGGTTCCTA+TGG | - | chr5_3:14272809-14272828 | None:intergenic | 40.0% | |
TGATAGAATCTCGTCTTAGG+TGG | + | chr5_3:14273073-14273092 | Msa0800760:intron | 40.0% | |
GGGAGATCAAAGAAGACTAT+AGG | + | chr5_3:14273169-14273188 | Msa0800760:intron | 40.0% | |
CCAACTCACTTACTTAGCTT+CGG | + | chr5_3:14273629-14273648 | Msa0800760:intron | 40.0% | |
AGAAGACCACAAAAAGTGGT+AGG | + | chr5_3:14273810-14273829 | Msa0800760:intron | 40.0% | |
AATTAGGTCGTCTGTCTACA+TGG | - | chr5_3:14274031-14274050 | None:intergenic | 40.0% | |
ATGGGAAAATGTTTGGGTCT+TGG | + | chr5_3:14274053-14274072 | Msa0800760:intron | 40.0% | |
! | TAGTATTGGAGTCCAATCCT+TGG | - | chr5_3:14274262-14274281 | None:intergenic | 40.0% |
!! | TTAATCTCTGAGATGCTTGC+AGG | + | chr5_3:14274404-14274423 | Msa0800760:intron | 40.0% |
!! | CATATAAGTGGCTTTGTTGG+AGG | - | chr5_3:14274435-14274454 | None:intergenic | 40.0% |
CTCCAACAAAGCCACTTATA+TGG | + | chr5_3:14274433-14274452 | Msa0800760:CDS | 40.0% | |
TTTACCTGCTTTGGCTGAAA+TGG | - | chr5_3:14274492-14274511 | None:intergenic | 40.0% | |
! | TGTCTGAAGTGGAAAAGAAG+AGG | - | chr5_3:14274753-14274772 | None:intergenic | 40.0% |
ATGACAATCATCAGTGCTAC+AGG | + | chr5_3:14274785-14274804 | Msa0800760:CDS | 40.0% | |
TGACAATCATCAGTGCTACA+GGG | + | chr5_3:14274786-14274805 | Msa0800760:CDS | 40.0% | |
CGGTTATTCTGGCAATTTAC+TGG | + | chr5_3:14274897-14274916 | Msa0800760:CDS | 40.0% | |
!! | GTTACTCTTTTTCATAGCGG+TGG | - | chr5_3:14274947-14274966 | None:intergenic | 40.0% |
!!! | CAAGGAGTTCACTTTTTGGA+TGG | + | chr5_3:14275000-14275019 | Msa0800760:CDS | 40.0% |
GAAGAACTTCTCGCATAAGA+AGG | - | chr5_3:14275063-14275082 | None:intergenic | 40.0% | |
TTTGAAGGTTATGAGTGCCA+TGG | + | chr5_3:14275132-14275151 | Msa0800760:CDS | 40.0% | |
TTGAAGGTTATGAGTGCCAT+GGG | + | chr5_3:14275133-14275152 | Msa0800760:CDS | 40.0% | |
GGTTATGATGTAGAGATTGG+TGG | + | chr5_3:14275159-14275178 | Msa0800760:CDS | 40.0% | |
AAGAGTTGCTCTACACAAAG+AGG | + | chr5_3:14275204-14275223 | Msa0800760:CDS | 40.0% | |
! | AACTCCAAACCGATAGCTTT+TGG | + | chr5_3:14275271-14275290 | Msa0800760:CDS | 40.0% |
! | TACTCCAAAAGCTATCGGTT+TGG | - | chr5_3:14275278-14275297 | None:intergenic | 40.0% |
TTGGAGTAAGCAAAACCTAG+GGG | + | chr5_3:14275290-14275309 | Msa0800760:CDS | 40.0% | |
! | AGAGGGAGACAATTTTCTTC+AGG | - | chr5_3:14275420-14275439 | None:intergenic | 40.0% |
ATTGTCTCCCTCTAGATTCA+TGG | + | chr5_3:14275427-14275446 | Msa0800760:CDS | 40.0% | |
GCTGAATACCATGAATCTAG+AGG | - | chr5_3:14275438-14275457 | None:intergenic | 40.0% | |
TGGTATTCAGCAACACAAAC+AGG | + | chr5_3:14275447-14275466 | Msa0800760:CDS | 40.0% | |
GCAACACAAACAGGTAACTT+TGG | + | chr5_3:14275456-14275475 | Msa0800760:CDS | 40.0% | |
! | ATTTTCAGCTACGATCTTGG+AGG | + | chr5_3:14275654-14275673 | Msa0800760:CDS | 40.0% |
TTTGCAAAACTTGAGGTGCA+TGG | - | chr5_3:14275777-14275796 | None:intergenic | 40.0% | |
!! | TCTTTTTAGGCACCCAACTT+TGG | + | chr5_3:14275983-14276002 | Msa0800760:CDS | 40.0% |
! | CACGAGTCTTTTCCAAAGTT+GGG | - | chr5_3:14275998-14276017 | None:intergenic | 40.0% |
! | ACACGAGTCTTTTCCAAAGT+TGG | - | chr5_3:14275999-14276018 | None:intergenic | 40.0% |
TTTAAATCAGCCTCCCGAAA+TGG | + | chr5_3:14276079-14276098 | Msa0800760:CDS | 40.0% | |
!! | GGTCTTTTAGCTACCATTTC+GGG | - | chr5_3:14276095-14276114 | None:intergenic | 40.0% |
!! | GGGTCTTTTAGCTACCATTT+CGG | - | chr5_3:14276096-14276115 | None:intergenic | 40.0% |
AACCTAGAAGTTTGGAAGCA+GGG | - | chr5_3:14276136-14276155 | None:intergenic | 40.0% | |
AAACCTAGAAGTTTGGAAGC+AGG | - | chr5_3:14276137-14276156 | None:intergenic | 40.0% | |
CCCCAACAATGAAGATCTAT+TGG | + | chr5_3:14276288-14276307 | Msa0800760:CDS | 40.0% | |
TAATGTGAAACGGAGTTCAG+AGG | + | chr5_3:14276420-14276439 | Msa0800760:CDS | 40.0% | |
TGCAAGATTCCGGAGATTAT+GGG | + | chr5_3:14276964-14276983 | Msa0800760:CDS | 40.0% | |
CCGGAGATTATGGGAATAAA+TGG | + | chr5_3:14276973-14276992 | Msa0800760:CDS | 40.0% | |
GACAACATAACTGGAGTTTG+AGG | - | chr5_3:14277011-14277030 | None:intergenic | 40.0% | |
TATCAGTAAGAAATGCCTCG+AGG | + | chr5_3:14277243-14277262 | Msa0800760:CDS | 40.0% | |
ATCCACCTGATGAAGAACTT+TGG | - | chr5_3:14277272-14277291 | None:intergenic | 40.0% | |
!! | AACCCTTGCTGTTATTGATC+AGG | + | chr5_3:14277321-14277340 | Msa0800760:CDS | 40.0% |
GACCTGATCAATAACAGCAA+GGG | - | chr5_3:14277326-14277345 | None:intergenic | 40.0% | |
AGACCTGATCAATAACAGCA+AGG | - | chr5_3:14277327-14277346 | None:intergenic | 40.0% | |
! | TTGCTGTTATTGATCAGGTC+TGG | + | chr5_3:14277326-14277345 | Msa0800760:intron | 40.0% |
CAACAAAAAGACTAACCAGG+AGG | - | chr5_3:14277499-14277518 | None:intergenic | 40.0% | |
CTCTACCATACAGACACATT+GGG | + | chr5_3:14277698-14277717 | Msa0800760:intron | 40.0% | |
TACAACCCAATGTGTCTGTA+TGG | - | chr5_3:14277706-14277725 | None:intergenic | 40.0% | |
GTAATGATCTAAGCCATGCT+GGG | - | chr5_3:14277753-14277772 | None:intergenic | 40.0% | |
AGTAATGATCTAAGCCATGC+TGG | - | chr5_3:14277754-14277773 | None:intergenic | 40.0% | |
AACATCCAACTTTCCTGAAG+GGG | - | chr5_3:14277887-14277906 | None:intergenic | 40.0% | |
GGTATTATCTGGAGAAGCAA+AGG | + | chr5_3:14278053-14278072 | Msa0800760:intron | 40.0% | |
AACCTATCTAGATGCTGAAC+AGG | + | chr5_3:14278080-14278099 | Msa0800760:CDS | 40.0% | |
AACAGATTAAAGATTGGGGC+TGG | + | chr5_3:14278239-14278258 | Msa0800760:CDS | 40.0% | |
CACAGGCTGTATTACTCATA+CGG | + | chr5_3:14278311-14278330 | Msa0800760:intron | 40.0% | |
ATGCATGGATGGTGAAGTTA+TGG | - | chr5_3:14278421-14278440 | None:intergenic | 40.0% | |
AATGACAATCGCTCTTGTTG+CGG | + | chr5_3:14278598-14278617 | Msa0800760:CDS | 40.0% | |
!! | GCTTTAGCTCTTCAACTAGA+AGG | - | chr5_3:14279181-14279200 | None:intergenic | 40.0% |
TAATCTCACCTGGAAACAGA+GGG | - | chr5_3:14279210-14279229 | None:intergenic | 40.0% | |
ATAATCTCACCTGGAAACAG+AGG | - | chr5_3:14279211-14279230 | None:intergenic | 40.0% | |
! | AGTTTTCATGACGAACTGAG+CGG | + | chr5_3:14279266-14279285 | Msa0800760:intron | 40.0% |
TTGACTAAAGGAACAGTGGT+TGG | - | chr5_3:14279319-14279338 | None:intergenic | 40.0% | |
! | CAAGTTGACTAAAGGAACAG+TGG | - | chr5_3:14279323-14279342 | None:intergenic | 40.0% |
CACTGTTCCTTTAGTCAACT+TGG | + | chr5_3:14279321-14279340 | Msa0800760:CDS | 40.0% | |
TGTTCCTTTAGTCAACTTGG+AGG | + | chr5_3:14279324-14279343 | Msa0800760:CDS | 40.0% | |
ACAAGAGCTCAAGTAACAAG+TGG | + | chr5_3:14279383-14279402 | Msa0800760:CDS | 40.0% | |
TGAGACTTCAGAAGAAACCA+TGG | + | chr5_3:14279472-14279491 | Msa0800760:exon | 40.0% | |
GGAAGCTTCACGAATAATGG+CGG | - | chr5_3:14268897-14268916 | None:intergenic | 45.0% | |
GGCGACGATAAGACCTTTAT+CGG | + | chr5_3:14268989-14269008 | Msa0800760:CDS | 45.0% | |
CGACTTCACAAGAATCGTTG+AGG | + | chr5_3:14269052-14269071 | Msa0800760:CDS | 45.0% | |
TCAGTGTTATGTCCGGAATC+CGG | - | chr5_3:14269308-14269327 | None:intergenic | 45.0% | |
GTGTATCTAGTGTCTGACAC+TGG | - | chr5_3:14269388-14269407 | None:intergenic | 45.0% | |
! | TCGATGAATGGGTTTGTAGG+AGG | + | chr5_3:14269500-14269519 | Msa0800760:intron | 45.0% |
! | ATGAATGGGTTTGTAGGAGG+TGG | + | chr5_3:14269503-14269522 | Msa0800760:intron | 45.0% |
GAGGTGGAATTACTCGAGAT+GGG | + | chr5_3:14269519-14269538 | Msa0800760:CDS | 45.0% | |
ACTCTGGCCCATTACTAAGT+AGG | - | chr5_3:14269819-14269838 | None:intergenic | 45.0% | |
TCCACAGTGAAGACACACAT+TGG | + | chr5_3:14269904-14269923 | Msa0800760:intron | 45.0% | |
ACCAATGTGTGTCTTCACTG+TGG | - | chr5_3:14269908-14269927 | None:intergenic | 45.0% | |
! | CTACACTTACCAGAGAGTGT+TGG | + | chr5_3:14269935-14269954 | Msa0800760:intron | 45.0% |
!! | AGAGTGTTGGCTTTCCATGT+GGG | + | chr5_3:14269948-14269967 | Msa0800760:intron | 45.0% |
AGATAGTAAAGGCAACTGGG+TGG | + | chr5_3:14270161-14270180 | Msa0800760:intron | 45.0% | |
TAAAGGCAACTGGGTGGAAA+CGG | + | chr5_3:14270167-14270186 | Msa0800760:intron | 45.0% | |
CACCATAATCAATGGCAGCA+AGG | - | chr5_3:14270278-14270297 | None:intergenic | 45.0% | |
AGAACTTATGGACGGCCAAA+TGG | + | chr5_3:14270431-14270450 | Msa0800760:CDS | 45.0% | |
ATGGACGGCCAAATGGATAT+AGG | + | chr5_3:14270438-14270457 | Msa0800760:CDS | 45.0% | |
AGAAAGGAAGTAGGCACAAC+AGG | + | chr5_3:14270604-14270623 | Msa0800760:CDS | 45.0% | |
CATAATCTCTCTTCCACACC+GGG | + | chr5_3:14271195-14271214 | Msa0800760:intron | 45.0% | |
TTTGTTTCCTCCGAACTGGT+TGG | - | chr5_3:14271354-14271373 | None:intergenic | 45.0% | |
! | TGGATTTGTTTCCTCCGAAC+TGG | - | chr5_3:14271358-14271377 | None:intergenic | 45.0% |
GGAGGAAACAAATCCAATCC+AGG | + | chr5_3:14271362-14271381 | Msa0800760:CDS | 45.0% | |
TGGTCAAGAGAAAAGCAACC+TGG | - | chr5_3:14271383-14271402 | None:intergenic | 45.0% | |
CTGAATTGGAAGCCCCAATA+AGG | + | chr5_3:14271498-14271517 | Msa0800760:intron | 45.0% | |
!! | TCACTTGTAACCACTGGCTT+TGG | + | chr5_3:14271720-14271739 | Msa0800760:CDS | 45.0% |
!! | CACTTGTAACCACTGGCTTT+GGG | + | chr5_3:14271721-14271740 | Msa0800760:CDS | 45.0% |
!! | ACTTGTAACCACTGGCTTTG+GGG | + | chr5_3:14271722-14271741 | Msa0800760:CDS | 45.0% |
! | CTGTCTCATCCCCTAACTTT+TGG | + | chr5_3:14271915-14271934 | Msa0800760:intron | 45.0% |
AACTCCCAGTTCGTTTGCAA+GGG | + | chr5_3:14272106-14272125 | Msa0800760:CDS | 45.0% | |
GAAGGACTCAAAGTTACCCT+TGG | - | chr5_3:14272494-14272513 | None:intergenic | 45.0% | |
GGACTGAGAAGTTAGAGACA+TGG | + | chr5_3:14272597-14272616 | Msa0800760:intron | 45.0% | |
GGGTTCATCATACAAAGTGG+TGG | + | chr5_3:14272763-14272782 | Msa0800760:intron | 45.0% | |
CCGAAGCTAAGTAAGTGAGT+TGG | - | chr5_3:14273632-14273651 | None:intergenic | 45.0% | |
TTACCACACCACTGTGTACA+TGG | - | chr5_3:14273688-14273707 | None:intergenic | 45.0% | |
AGTGGTGTGGTAAGACTAAG+TGG | + | chr5_3:14273695-14273714 | Msa0800760:intron | 45.0% | |
AGTACTTCGTGTAATCTGGG+TGG | + | chr5_3:14274103-14274122 | Msa0800760:intron | 45.0% | |
CTCTTCTAACCGTTCCTTGT+TGG | - | chr5_3:14274141-14274160 | None:intergenic | 45.0% | |
!!! | TGCTTTTTCCCCAACTTCCA+AGG | + | chr5_3:14274242-14274261 | Msa0800760:intron | 45.0% |
TTTCCCCAACTTCCAAGGAT+TGG | + | chr5_3:14274247-14274266 | Msa0800760:intron | 45.0% | |
AGTCCAATCCTTGGAAGTTG+GGG | - | chr5_3:14274253-14274272 | None:intergenic | 45.0% | |
GAGTCCAATCCTTGGAAGTT+GGG | - | chr5_3:14274254-14274273 | None:intergenic | 45.0% | |
GTTTGGAAGCCAAGATCGTA+AGG | + | chr5_3:14274717-14274736 | Msa0800760:CDS | 45.0% | |
AATAACCGGTCTGACGAAGA+TGG | - | chr5_3:14274885-14274904 | None:intergenic | 45.0% | |
TCATAGAAACTTTCGGCAGC+AGG | - | chr5_3:14275033-14275052 | None:intergenic | 45.0% | |
TATGCGAGAAGTTCTTCACG+TGG | + | chr5_3:14275066-14275085 | Msa0800760:CDS | 45.0% | |
CTACATCATAACCGAACCCA+TGG | - | chr5_3:14275152-14275171 | None:intergenic | 45.0% | |
AGTTGCTCTACACAAAGAGG+TGG | + | chr5_3:14275207-14275226 | Msa0800760:CDS | 45.0% | |
CAAGCAAAGTCTTCTCGTTC+AGG | - | chr5_3:14275236-14275255 | None:intergenic | 45.0% | |
TGGAGTAAGCAAAACCTAGG+GGG | + | chr5_3:14275291-14275310 | Msa0800760:CDS | 45.0% | |
! | GGATTTTTGCAGTGGTAGCA+AGG | + | chr5_3:14275314-14275333 | Msa0800760:CDS | 45.0% |
TTGCAACTTCTACACAGGGA+CGG | - | chr5_3:14275350-14275369 | None:intergenic | 45.0% | |
GAGCATCTAGATGCAGTACA+AGG | + | chr5_3:14275676-14275695 | Msa0800760:CDS | 45.0% | |
CATGTCAAGGAATGCTAACC+AGG | + | chr5_3:14275749-14275768 | Msa0800760:CDS | 45.0% | |
!! | CTTTTAGCTACCATTTCGGG+AGG | - | chr5_3:14276092-14276111 | None:intergenic | 45.0% |
ATGGTAGCTAAAAGACCCAG+CGG | + | chr5_3:14276098-14276117 | Msa0800760:CDS | 45.0% | |
TAGAAGTTTGGAAGCAGGGT+CGG | - | chr5_3:14276132-14276151 | None:intergenic | 45.0% | |
AAACGGAGTTCAGAGGTTCT+GGG | + | chr5_3:14276427-14276446 | Msa0800760:CDS | 45.0% | |
AATGACGCTGCTGAGATTGA+AGG | + | chr5_3:14276463-14276482 | Msa0800760:CDS | 45.0% | |
ATGACGCTGCTGAGATTGAA+GGG | + | chr5_3:14276464-14276483 | Msa0800760:CDS | 45.0% | |
ACATTGAACTCACCCCTGAA+TGG | - | chr5_3:14276520-14276539 | None:intergenic | 45.0% | |
! | TGGATTCGGAGTGAGTTGAA+AGG | + | chr5_3:14276634-14276653 | Msa0800760:intron | 45.0% |
! | GGATTCGGAGTGAGTTGAAA+GGG | + | chr5_3:14276635-14276654 | Msa0800760:intron | 45.0% |
! | TCTAGGGAAGTGCAAGATTC+CGG | + | chr5_3:14276954-14276973 | Msa0800760:CDS | 45.0% |
GTGCAAGATTCCGGAGATTA+TGG | + | chr5_3:14276963-14276982 | Msa0800760:CDS | 45.0% | |
TCTGGATTCTTGCATCTTGC+TGG | + | chr5_3:14277199-14277218 | Msa0800760:CDS | 45.0% | |
GGATGCCAAAGTTCTTCATC+AGG | + | chr5_3:14277264-14277283 | Msa0800760:CDS | 45.0% | |
TGCCAAAGTTCTTCATCAGG+TGG | + | chr5_3:14277267-14277286 | Msa0800760:CDS | 45.0% | |
! | TTGTGCTTTGAGTCAAGGCT+TGG | - | chr5_3:14277580-14277599 | None:intergenic | 45.0% |
GTACACTATGCCTGCTTGAA+AGG | - | chr5_3:14277630-14277649 | None:intergenic | 45.0% | |
TGTCTGTATGGTAGAGGCAA+GGG | - | chr5_3:14277694-14277713 | None:intergenic | 45.0% | |
CCAATGTGTCTGTATGGTAG+AGG | - | chr5_3:14277700-14277719 | None:intergenic | 45.0% | |
CCTCTACCATACAGACACAT+TGG | + | chr5_3:14277697-14277716 | Msa0800760:intron | 45.0% | |
ATTCTCAGTTCTCGTTGGTC+AGG | - | chr5_3:14277863-14277882 | None:intergenic | 45.0% | |
ACATCCAACTTTCCTGAAGG+GGG | - | chr5_3:14277886-14277905 | None:intergenic | 45.0% | |
TGGAGACGAAAGAATCAGAC+TGG | + | chr5_3:14277941-14277960 | Msa0800760:CDS | 45.0% | |
ACTGGAAGACTTGCGTCAAA+AGG | + | chr5_3:14277959-14277978 | Msa0800760:CDS | 45.0% | |
CTCCTGTTCAGCATCTAGAT+AGG | - | chr5_3:14278085-14278104 | None:intergenic | 45.0% | |
CTTCAGCTAGCTGATACTGA+CGG | + | chr5_3:14278877-14278896 | Msa0800760:intron | 45.0% | |
ATCATCAACAATGCCACCCT+CGG | + | chr5_3:14278900-14278919 | Msa0800760:CDS | 45.0% | |
TTTAGGAGTCGTACAACCGA+GGG | - | chr5_3:14278919-14278938 | None:intergenic | 45.0% | |
ATTTAGGAGTCGTACAACCG+AGG | - | chr5_3:14278920-14278939 | None:intergenic | 45.0% | |
ACCACATACGCTCAGTAGTT+TGG | + | chr5_3:14278982-14279001 | Msa0800760:intron | 45.0% | |
TCCAAACTACTGAGCGTATG+TGG | - | chr5_3:14278986-14279005 | None:intergenic | 45.0% | |
TCGTTTGCATGATAAGAGCG+AGG | - | chr5_3:14279012-14279031 | None:intergenic | 45.0% | |
TCGCTCTTATCATGCAAACG+AGG | + | chr5_3:14279011-14279030 | Msa0800760:intron | 45.0% | |
!! | ACTAGAAGGGAGCATTCTGA+TGG | - | chr5_3:14279167-14279186 | None:intergenic | 45.0% |
TTCATTGTGCAGTGTGCTCA+TGG | + | chr5_3:14279289-14279308 | Msa0800760:intron | 45.0% | |
TCATTGTGCAGTGTGCTCAT+GGG | + | chr5_3:14279290-14279309 | Msa0800760:intron | 45.0% | |
! | AGTGCCTCCAAGTTGACTAA+AGG | - | chr5_3:14279331-14279350 | None:intergenic | 45.0% |
CTTGTTCATCAGTCCAAGCT+TGG | - | chr5_3:14279368-14279387 | None:intergenic | 45.0% | |
AGCTCAAGTAACAAGTGGCA+TGG | + | chr5_3:14279388-14279407 | Msa0800760:CDS | 45.0% | |
!!! | ATTTTAAATTATTTTTTAGT+CGG | + | chr5_3:14273474-14273493 | Msa0800760:intron | 5.0% |
CTACGATCGCGATGAAGATG+AGG | - | chr5_3:14268955-14268974 | None:intergenic | 50.0% | |
TTATGTCCGGAATCCGGTGT+CGG | - | chr5_3:14269302-14269321 | None:intergenic | 50.0% | |
GGAGGTGGAATTACTCGAGA+TGG | + | chr5_3:14269518-14269537 | Msa0800760:intron | 50.0% | |
TGGAATTACTCGAGATGGGC+TGG | + | chr5_3:14269523-14269542 | Msa0800760:CDS | 50.0% | |
!! | TACTCGAGATGGGCTGGAAT+TGG | + | chr5_3:14269529-14269548 | Msa0800760:CDS | 50.0% |
CATGGAAAGCCAACACTCTC+TGG | - | chr5_3:14269947-14269966 | None:intergenic | 50.0% | |
!! | GAGAGTGTTGGCTTTCCATG+TGG | + | chr5_3:14269947-14269966 | Msa0800760:intron | 50.0% |
!! | GAGTGTTGGCTTTCCATGTG+GGG | + | chr5_3:14269949-14269968 | Msa0800760:intron | 50.0% |
!! | AGTGTTGGCTTTCCATGTGG+GGG | + | chr5_3:14269950-14269969 | Msa0800760:intron | 50.0% |
TCTACAACCAACCAGTTCGG+AGG | + | chr5_3:14271344-14271363 | Msa0800760:CDS | 50.0% | |
TGGGGCTTCCAATTCAGAGA+CGG | - | chr5_3:14271495-14271514 | None:intergenic | 50.0% | |
CCAGTGGTTACAAGTGACAG+TGG | - | chr5_3:14271717-14271736 | None:intergenic | 50.0% | |
! | CCACTGTCACTTGTAACCAC+TGG | + | chr5_3:14271714-14271733 | Msa0800760:CDS | 50.0% |
ATCAGGTCCTTGCAATACCC+TGG | + | chr5_3:14271812-14271831 | Msa0800760:CDS | 50.0% | |
CAACTCCCAGTTCGTTTGCA+AGG | + | chr5_3:14272105-14272124 | Msa0800760:CDS | 50.0% | |
AGGTCCCTTGCAAACGAACT+GGG | - | chr5_3:14272113-14272132 | None:intergenic | 50.0% | |
! | GGTTTGAGCATCGTAACTCG+TGG | + | chr5_3:14272164-14272183 | Msa0800760:CDS | 50.0% |
! | ACAAAGTGGTGGGGAGATAG+AGG | + | chr5_3:14272774-14272793 | Msa0800760:intron | 50.0% |
CTTGCCTACCATGTACACAG+TGG | + | chr5_3:14273677-14273696 | Msa0800760:intron | 50.0% | |
CACACCACTGTGTACATGGT+AGG | - | chr5_3:14273684-14273703 | None:intergenic | 50.0% | |
CTACCATGTACACAGTGGTG+TGG | + | chr5_3:14273682-14273701 | Msa0800760:intron | 50.0% | |
!!! | GTGGGACCTACCACTTTTTG+TGG | - | chr5_3:14273819-14273838 | None:intergenic | 50.0% |
GGAGTCCAATCCTTGGAAGT+TGG | - | chr5_3:14274255-14274274 | None:intergenic | 50.0% | |
! | TGGGAGAGAAGCATAGCTTG+TGG | + | chr5_3:14274312-14274331 | Msa0800760:CDS | 50.0% |
ACCTGCTTTGGCTGAAATGG+TGG | - | chr5_3:14274489-14274508 | None:intergenic | 50.0% | |
CAATCATCAGTGCTACAGGG+AGG | + | chr5_3:14274789-14274808 | Msa0800760:CDS | 50.0% | |
CTTCGTCAGACCGGTTATTC+TGG | + | chr5_3:14274886-14274905 | Msa0800760:CDS | 50.0% | |
! | CATAGCGGTGGACATGCTTT+TGG | - | chr5_3:14274935-14274954 | None:intergenic | 50.0% |
GGTTATGAGTGCCATGGGTT+CGG | + | chr5_3:14275138-14275157 | Msa0800760:CDS | 50.0% | |
GGAGTAAGCAAAACCTAGGG+GGG | + | chr5_3:14275292-14275311 | Msa0800760:CDS | 50.0% | |
GAGTAAGCAAAACCTAGGGG+GGG | + | chr5_3:14275293-14275312 | Msa0800760:CDS | 50.0% | |
TGCAACTTCTACACAGGGAC+GGG | - | chr5_3:14275349-14275368 | None:intergenic | 50.0% | |
CAATGCAGTAGCTCGAGATG+AGG | - | chr5_3:14275532-14275551 | None:intergenic | 50.0% | |
AACTTGAGGTGCATGGATCC+TGG | - | chr5_3:14275770-14275789 | None:intergenic | 50.0% | |
CACTCAGGTAATAGGCAGTC+TGG | - | chr5_3:14275918-14275937 | None:intergenic | 50.0% | |
GACCCTGCTTCCAAACTTCT+AGG | + | chr5_3:14276131-14276150 | Msa0800760:CDS | 50.0% | |
!! | TTGTTGGGGCTAAGAGCATC+AGG | - | chr5_3:14276277-14276296 | None:intergenic | 50.0% |
GAAACGGAGTTCAGAGGTTC+TGG | + | chr5_3:14276426-14276445 | Msa0800760:CDS | 50.0% | |
AACGGAGTTCAGAGGTTCTG+GGG | + | chr5_3:14276428-14276447 | Msa0800760:CDS | 50.0% | |
CAGGGGTGAGTTCAATGTGT+TGG | + | chr5_3:14276522-14276541 | Msa0800760:intron | 50.0% | |
ACTCACTCCGAATCCAAACC+AGG | - | chr5_3:14276630-14276649 | None:intergenic | 50.0% | |
GAAGAACTTTGGCATCCTCG+AGG | - | chr5_3:14277261-14277280 | None:intergenic | 50.0% | |
AAAGACTAACCAGGAGGGCT+TGG | - | chr5_3:14277493-14277512 | None:intergenic | 50.0% | |
TTGAGTCAAGGCTTGGCTGT+TGG | - | chr5_3:14277573-14277592 | None:intergenic | 50.0% | |
! | GTGGGTTGTGCTTTGAGTCA+AGG | - | chr5_3:14277585-14277604 | None:intergenic | 50.0% |
ATCAGGCTCTCCTTTCAAGC+AGG | + | chr5_3:14277617-14277636 | Msa0800760:intron | 50.0% | |
AGATGTCGTGGGTTTGTGTC+AGG | - | chr5_3:14277659-14277678 | None:intergenic | 50.0% | |
TGTCTGAGGGAAGATGTCGT+GGG | - | chr5_3:14277670-14277689 | None:intergenic | 50.0% | |
GTCTGTATGGTAGAGGCAAG+GGG | - | chr5_3:14277693-14277712 | None:intergenic | 50.0% | |
GTGTCTGTATGGTAGAGGCA+AGG | - | chr5_3:14277695-14277714 | None:intergenic | 50.0% | |
GTATCTTCTTCATCGCCTCC+TGG | + | chr5_3:14277723-14277742 | Msa0800760:intron | 50.0% | |
CACTTAGCAGGCGTTTCTGA+AGG | - | chr5_3:14277784-14277803 | None:intergenic | 50.0% | |
TGTGTGTGTGAGCACTTAGC+AGG | - | chr5_3:14277796-14277815 | None:intergenic | 50.0% | |
AGAACTGAGAATCCCCCTTC+AGG | + | chr5_3:14277871-14277890 | Msa0800760:intron | 50.0% | |
GAATCCCCCTTCAGGAAAGT+TGG | + | chr5_3:14277879-14277898 | Msa0800760:intron | 50.0% | |
TCTAGATGCTGAACAGGAGC+TGG | + | chr5_3:14278086-14278105 | Msa0800760:CDS | 50.0% | |
! | ATGCAGGTACTGCCAGAGAT+TGG | + | chr5_3:14278190-14278209 | Msa0800760:intron | 50.0% |
CGTCAGTATCAGCTAGCTGA+AGG | - | chr5_3:14278879-14278898 | None:intergenic | 50.0% | |
GCATACATCCCTCTGTTTCC+AGG | + | chr5_3:14279199-14279218 | Msa0800760:CDS | 50.0% | |
ATCGTAGCAGCGAAGCGTGA+TGG | + | chr5_3:14268968-14268987 | Msa0800760:exon | 55.0% | |
GTGTCTGACACTGGCACAAG+TGG | - | chr5_3:14269379-14269398 | None:intergenic | 55.0% | |
!! | TCGAGATGGGCTGGAATTGG+TGG | + | chr5_3:14269532-14269551 | Msa0800760:CDS | 55.0% |
!! | CGAGATGGGCTGGAATTGGT+GGG | + | chr5_3:14269533-14269552 | Msa0800760:CDS | 55.0% |
! | TTGGCTTTCCATGTGGGGGA+AGG | + | chr5_3:14269954-14269973 | Msa0800760:intron | 55.0% |
GTATTTCGGATTGCCCGGTG+TGG | - | chr5_3:14271211-14271230 | None:intergenic | 55.0% | |
!! | TGTAACCACTGGCTTTGGGG+TGG | + | chr5_3:14271725-14271744 | Msa0800760:CDS | 55.0% |
CAGGTCCCTTGCAAACGAAC+TGG | - | chr5_3:14272114-14272133 | None:intergenic | 55.0% | |
GCCACCATTTCAGCCAAAGC+AGG | + | chr5_3:14274485-14274504 | Msa0800760:CDS | 55.0% | |
CACTGCAAAAATCCCCCCCT+AGG | - | chr5_3:14275308-14275327 | None:intergenic | 55.0% | |
! | CTAGGGGGGGATTTTTGCAG+TGG | + | chr5_3:14275306-14275325 | Msa0800760:CDS | 55.0% |
!! | TTGGGGCTAAGAGCATCAGG+AGG | - | chr5_3:14276274-14276293 | None:intergenic | 55.0% |
! | ACGGAGTTCAGAGGTTCTGG+GGG | + | chr5_3:14276429-14276448 | Msa0800760:CDS | 55.0% |
AGGGTTCTGCCAGCCATGAT+TGG | - | chr5_3:14277307-14277326 | None:intergenic | 55.0% | |
GTGTCTGAGGGAAGATGTCG+TGG | - | chr5_3:14277671-14277690 | None:intergenic | 55.0% | |
!! | TAGAGGCAAGGGGTGTCTGA+GGG | - | chr5_3:14277683-14277702 | None:intergenic | 55.0% |
TAAGCCATGCTGGGAAGTCC+AGG | - | chr5_3:14277744-14277763 | None:intergenic | 55.0% | |
GGGGGATTCTCAGTTCTCGT+TGG | - | chr5_3:14277868-14277887 | None:intergenic | 55.0% | |
! | CCTTTGTAGCGCGAGCATCG+AGG | - | chr5_3:14269094-14269113 | None:intergenic | 60.0% |
CCTCGATGCTCGCGCTACAA+AGG | + | chr5_3:14269091-14269110 | Msa0800760:CDS | 60.0% | |
!! | CAAGCACCGACACCGGATTC+CGG | + | chr5_3:14269293-14269312 | Msa0800760:intron | 60.0% |
GTAGCAAGCCTTCCCCCACA+TGG | - | chr5_3:14269965-14269984 | None:intergenic | 60.0% | |
!! | AACCACTGGCTTTGGGGTGG+AGG | + | chr5_3:14271728-14271747 | Msa0800760:CDS | 60.0% |
GGAGGCCATCTTCGTCAGAC+CGG | + | chr5_3:14274877-14274896 | Msa0800760:CDS | 60.0% | |
!! | AGAGGTTCTGGGGGCTACAC+AGG | + | chr5_3:14276438-14276457 | Msa0800760:CDS | 60.0% |
!! | GTAGAGGCAAGGGGTGTCTG+AGG | - | chr5_3:14277684-14277703 | None:intergenic | 60.0% |
AGGAGTCGTACAACCGAGGG+TGG | - | chr5_3:14278916-14278935 | None:intergenic | 60.0% | |
GACCTCCACCCCAAAGCCAG+TGG | - | chr5_3:14271733-14271752 | None:intergenic | 65.0% | |
GGGTCGGATGCTAGACCGCT+GGG | - | chr5_3:14276116-14276135 | None:intergenic | 65.0% | |
AGGGTCGGATGCTAGACCGC+TGG | - | chr5_3:14276117-14276136 | None:intergenic | 65.0% | |
CCAGGAGGGCTTGGCTGCAT+GGG | - | chr5_3:14277484-14277503 | None:intergenic | 65.0% | |
ACCAGGAGGGCTTGGCTGCA+TGG | - | chr5_3:14277485-14277504 | None:intergenic | 65.0% | |
GCCTCCTGGACTTCCCAGCA+TGG | + | chr5_3:14277737-14277756 | Msa0800760:intron | 65.0% | |
GCCATGCTGGGAAGTCCAGG+AGG | - | chr5_3:14277741-14277760 | None:intergenic | 65.0% | |
CCCATGCAGCCAAGCCCTCC+TGG | + | chr5_3:14277481-14277500 | Msa0800760:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 14268856 | 14279718 | 14268856 | ID=Msa0800760;Name=Msa0800760 |
chr5_3 | mRNA | 14268856 | 14279718 | 14268856 | ID=Msa0800760-mRNA-1;Parent=Msa0800760;Name=Msa0800760-mRNA-1;_AED=0.08;_eAED=0.08;_QI=131|0.95|0.96|1|0.95|0.96|25|244|1222 |
chr5_3 | exon | 14268856 | 14269112 | 14268856 | ID=Msa0800760-mRNA-1:exon:5927;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14269206 | 14269230 | 14269206 | ID=Msa0800760-mRNA-1:exon:5928;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14269519 | 14269566 | 14269519 | ID=Msa0800760-mRNA-1:exon:5929;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14270318 | 14270472 | 14270318 | ID=Msa0800760-mRNA-1:exon:5930;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14270568 | 14270625 | 14270568 | ID=Msa0800760-mRNA-1:exon:5931;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14271326 | 14271383 | 14271326 | ID=Msa0800760-mRNA-1:exon:5932;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14271510 | 14271602 | 14271510 | ID=Msa0800760-mRNA-1:exon:5933;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14271677 | 14271842 | 14271677 | ID=Msa0800760-mRNA-1:exon:5934;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14271962 | 14271977 | 14271962 | ID=Msa0800760-mRNA-1:exon:5935;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14272101 | 14272321 | 14272101 | ID=Msa0800760-mRNA-1:exon:5936;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14274264 | 14274333 | 14274264 | ID=Msa0800760-mRNA-1:exon:5937;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14274426 | 14274506 | 14274426 | ID=Msa0800760-mRNA-1:exon:5938;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14274707 | 14276152 | 14274707 | ID=Msa0800760-mRNA-1:exon:5939;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14276242 | 14276320 | 14276242 | ID=Msa0800760-mRNA-1:exon:5940;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14276417 | 14276526 | 14276417 | ID=Msa0800760-mRNA-1:exon:5941;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14276946 | 14277019 | 14276946 | ID=Msa0800760-mRNA-1:exon:5942;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14277148 | 14277342 | 14277148 | ID=Msa0800760-mRNA-1:exon:5943;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14277936 | 14277980 | 14277936 | ID=Msa0800760-mRNA-1:exon:5944;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14278054 | 14278107 | 14278054 | ID=Msa0800760-mRNA-1:exon:5945;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14278196 | 14278302 | 14278196 | ID=Msa0800760-mRNA-1:exon:5946;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14278571 | 14278619 | 14278571 | ID=Msa0800760-mRNA-1:exon:5947;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14278723 | 14278782 | 14278723 | ID=Msa0800760-mRNA-1:exon:5948;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14278883 | 14278955 | 14278883 | ID=Msa0800760-mRNA-1:exon:5949;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14279135 | 14279220 | 14279135 | ID=Msa0800760-mRNA-1:exon:5950;Parent=Msa0800760-mRNA-1 |
chr5_3 | exon | 14279301 | 14279718 | 14279301 | ID=Msa0800760-mRNA-1:exon:5951;Parent=Msa0800760-mRNA-1 |
chr5_3 | five_prime_UTR | 14268856 | 14268986 | 14268856 | ID=Msa0800760-mRNA-1:five_prime_utr;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14268987 | 14269112 | 14268987 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14269206 | 14269230 | 14269206 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14269519 | 14269566 | 14269519 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14270318 | 14270472 | 14270318 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14270568 | 14270625 | 14270568 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14271326 | 14271383 | 14271326 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14271510 | 14271602 | 14271510 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14271677 | 14271842 | 14271677 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14271962 | 14271977 | 14271962 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14272101 | 14272321 | 14272101 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14274264 | 14274333 | 14274264 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14274426 | 14274506 | 14274426 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14274707 | 14276152 | 14274707 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14276242 | 14276320 | 14276242 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14276417 | 14276526 | 14276417 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14276946 | 14277019 | 14276946 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14277148 | 14277342 | 14277148 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14277936 | 14277980 | 14277936 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14278054 | 14278107 | 14278054 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14278196 | 14278302 | 14278196 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14278571 | 14278619 | 14278571 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14278723 | 14278782 | 14278723 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14278883 | 14278955 | 14278883 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14279135 | 14279220 | 14279135 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | CDS | 14279301 | 14279474 | 14279301 | ID=Msa0800760-mRNA-1:cds;Parent=Msa0800760-mRNA-1 |
chr5_3 | three_prime_UTR | 14279475 | 14279718 | 14279475 | ID=Msa0800760-mRNA-1:three_prime_utr;Parent=Msa0800760-mRNA-1 |
Gene Sequence |
Protein sequence |