AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1188970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 91 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGCAGGGTTGACGATTC+AGG 0.139753 8_1:-29869723 Msa1188970:five_prime_UTR
TAAGATTACATGTATCATTT+TGG 0.226865 8_1:+29871227 None:intergenic
TGTTTCAATTTCTCTACTTT+GGG 0.267804 8_1:-29871049 Msa1188970:five_prime_UTR
CACCACTTCAATGCATGAAT+TGG 0.272830 8_1:+29871086 None:intergenic
GGTGCTTAAAATTTATTATC+TGG 0.297194 8_1:-29869028 Msa1188970:three_prime_UTR
ATTGGGATAAGAAAGAAAAT+TGG 0.309564 8_1:+29871104 None:intergenic
TTGTTTCAATTTCTCTACTT+TGG 0.314070 8_1:-29871050 Msa1188970:five_prime_UTR
TTGGGATAAGAAAGAAAATT+GGG 0.319969 8_1:+29871105 None:intergenic
ATTAATGGTGCTGCAAAGTT+TGG 0.320369 8_1:-29869632 Msa1188970:exon
GGAAGCATACGGTCCTTTCT+TGG 0.323111 8_1:-29869377 Msa1188970:CDS
GGAAGTCTTGTTGATTTAGT+TGG 0.335009 8_1:-29869409 Msa1188970:CDS
GAGAGGAGTAAGACTGTAAG+AGG 0.335721 8_1:+29871308 None:intergenic
TCAAAGGGTTATGGTGGCTT+TGG 0.352518 8_1:+29871266 None:intergenic
GGTTTCGTGCGGTTGTTTAG+AGG 0.356770 8_1:-29868998 Msa1188970:three_prime_UTR
CAGTTAGGACCGAGGCTTCT+TGG 0.357951 8_1:-29869741 Msa1188970:five_prime_UTR
AATTTCTGCGTAGGAATATT+CGG 0.369204 8_1:-29869987 Msa1188970:intron
AAAATACCTTGAAATCCTTT+GGG 0.373281 8_1:+29869061 None:intergenic
TGATGAAGTTCAAAGGGTTA+TGG 0.383423 8_1:+29871257 None:intergenic
GCAAGAACAAGAAGAATAGA+AGG 0.386139 8_1:-29870895 Msa1188970:five_prime_UTR
TTGAATTGTGCTTCTCGCCT+TGG 0.392592 8_1:+29869525 None:intergenic
ATTTGTGTTCCAGATTGTTT+AGG 0.397267 8_1:-29869768 Msa1188970:intron
AAGGTGTAGGACTGTAGGTT+TGG 0.401042 8_1:+29871133 None:intergenic
TGGATGAGGTTACCTTTGAA+TGG 0.410546 8_1:-29869357 Msa1188970:CDS
CTGTAGGTTTGGTTGGGACT+AGG 0.414646 8_1:+29871144 None:intergenic
TAGGACCGAGGCTTCTTGGC+AGG 0.415660 8_1:-29869737 Msa1188970:five_prime_UTR
TGGTATGGAACTTCTTTGTC+CGG 0.423754 8_1:+29869484 None:intergenic
AATTGCTGCGTAGGAATATT+CGG 0.425916 8_1:-29869865 Msa1188970:intron
GTAGGACTGTAGGTTTGGTT+GGG 0.426279 8_1:+29871138 None:intergenic
GATTGTTTAGGCAGGCAGTT+AGG 0.435522 8_1:-29869756 Msa1188970:five_prime_UTR
TTGGCAGGGTTGACGATTCA+GGG 0.436084 8_1:-29869722 Msa1188970:five_prime_UTR
CGTGTTCGTGCATTTGAAAC+GGG 0.440856 8_1:-29869909 Msa1188970:five_prime_UTR
TGGTTCATCCCCACTTGATA+TGG 0.445421 8_1:-29870835 Msa1188970:intron
AGTATACTTCACACAGTATC+CGG 0.453436 8_1:-29869581 Msa1188970:CDS
ACCACTTCAATGCATGAATT+GGG 0.454441 8_1:+29871087 None:intergenic
GGATGAGGTTACCTTTGAAT+GGG 0.455125 8_1:-29869356 Msa1188970:CDS
TTCTTATGTGAATTAATATG+TGG 0.456754 8_1:-29871195 Msa1188970:five_prime_UTR
ATTGCAAATGACAATCTTGA+AGG 0.456999 8_1:-29869430 Msa1188970:CDS
AGAGGTAGAGGCAGCGGAAG+AGG 0.457632 8_1:-29869132 Msa1188970:three_prime_UTR
AGAATAGAAGGAGAAATTGA+AGG 0.460014 8_1:-29870883 Msa1188970:five_prime_UTR
CAAAGATTGATGAAGTTCAA+AGG 0.462763 8_1:+29871250 None:intergenic
GAAAGAAAATTGGGGAAAGA+AGG 0.470391 8_1:+29871114 None:intergenic
TTTGGGTTAAGATGAAGCTT+AGG 0.472756 8_1:-29871032 Msa1188970:intron
AACAAACCCAAAGGATTTCA+AGG 0.473412 8_1:-29869067 Msa1188970:three_prime_UTR
ATTGTGTGATTGATTCATCT+TGG 0.474013 8_1:+29869464 None:intergenic
GCGTGTTCGTGCATTTGAAA+CGG 0.477104 8_1:-29869910 Msa1188970:five_prime_UTR
AAAGATTGATGAAGTTCAAA+GGG 0.477967 8_1:+29871251 None:intergenic
AATATCTTTATCCCATTCAA+AGG 0.483583 8_1:+29869345 None:intergenic
TGTAGGACTGTAGGTTTGGT+TGG 0.492404 8_1:+29871137 None:intergenic
ATACGGTCCTTTCTTGGATG+AGG 0.503815 8_1:-29869371 Msa1188970:CDS
GTGATTGATTCATCTTGGTA+TGG 0.505565 8_1:+29869469 None:intergenic
AATTTATTATCTGGTAGCAT+AGG 0.515942 8_1:-29869019 Msa1188970:three_prime_UTR
GAATAGAAGGAGAAATTGAA+GGG 0.517096 8_1:-29870882 Msa1188970:five_prime_UTR
TCAGAGCTCTTGTTCATCAA+TGG 0.520698 8_1:-29870858 Msa1188970:five_prime_UTR
GGGTTATGGTGGCTTTGGAA+TGG 0.520808 8_1:+29871271 None:intergenic
GTGCGGTTGTTTAGAGGCCG+TGG 0.521598 8_1:-29868992 Msa1188970:three_prime_UTR
AGAGGAGTAAGACTGTAAGA+GGG 0.523370 8_1:+29871309 None:intergenic
TGATTTAGTTGGAGAAGTTG+AGG 0.526516 8_1:-29869398 Msa1188970:CDS
CGAATGTTAGGTAGAGGTAG+AGG 0.532296 8_1:-29869144 Msa1188970:intron
TTAGGTAGAGGTAGAGGCAG+CGG 0.532621 8_1:-29869138 Msa1188970:intron
AGGACCGAGGCTTCTTGGCA+GGG 0.533687 8_1:-29869736 Msa1188970:five_prime_UTR
GTGTTCCAGATTGTTTAGGC+AGG 0.537026 8_1:-29869764 Msa1188970:intron
ATACTTGAATTATTGAGCGT+TGG 0.537283 8_1:-29870922 Msa1188970:five_prime_UTR
ACGTTCTGTAATTGCTGCGT+AGG 0.545882 8_1:-29869874 Msa1188970:five_prime_UTR
TATGGTGGCTTTGGAATGGA+TGG 0.550702 8_1:+29871275 None:intergenic
GGTTTGGTTGGGACTAGGAG+AGG 0.551539 8_1:+29871149 None:intergenic
CAATTCATGCATTGAAGTGG+TGG 0.554056 8_1:-29871085 Msa1188970:five_prime_UTR
AAGGTAACCTCATCCAAGAA+AGG 0.563434 8_1:+29869364 None:intergenic
GAAAGAAGGTGTAGGACTGT+AGG 0.563545 8_1:+29871128 None:intergenic
TCTTACTCCTCTCTATCTCT+CGG 0.575098 8_1:-29871298 Msa1188970:five_prime_UTR
TCAACCCTGCCAAGAAGCCT+CGG 0.575981 8_1:+29869732 None:intergenic
ATTAATTCACATAAGAAATG+AGG 0.577524 8_1:+29871201 None:intergenic
TCCCAATTCATGCATTGAAG+TGG 0.578368 8_1:-29871088 Msa1188970:five_prime_UTR
TGAAGTTCAAAGGGTTATGG+TGG 0.583833 8_1:+29871260 None:intergenic
AGTAGAGAAATTGAAACAAG+AGG 0.594700 8_1:+29871054 None:intergenic
AACTTTAGAAGATAGCAAGC+CGG 0.596054 8_1:-29869503 Msa1188970:CDS
GAGCTCTTGTTCATCAATGG+TGG 0.600072 8_1:-29870855 Msa1188970:five_prime_UTR
AGAGAACTCACCATATCAAG+TGG 0.605853 8_1:+29870825 None:intergenic
TGGATGGCCGAGAGATAGAG+AGG 0.610112 8_1:+29871291 None:intergenic
TGATGAAACATATTCTGACT+AGG 0.610583 8_1:-29869263 Msa1188970:intron
GTTGGCTGTGATTAAGACCA+AGG 0.613774 8_1:-29869542 Msa1188970:CDS
GGAGAAGTTGAGGAAGCATA+CGG 0.617796 8_1:-29869388 Msa1188970:CDS
GAGAACTCACCATATCAAGT+GGG 0.622028 8_1:+29870826 None:intergenic
TGGCAGGGTTGACGATTCAG+GGG 0.627660 8_1:-29869721 Msa1188970:five_prime_UTR
TGGGATAAGAAAGAAAATTG+GGG 0.635478 8_1:+29871106 None:intergenic
CTGGTAGCATAGGTTTCGTG+CGG 0.636336 8_1:-29869009 Msa1188970:three_prime_UTR
TACTTCACACAGTATCCGGA+AGG 0.636948 8_1:-29869577 Msa1188970:CDS
ATCTTCTCAAACAAACCCAA+AGG 0.644202 8_1:-29869076 Msa1188970:three_prime_UTR
TCATGCATTGAAGTGGTGGA+AGG 0.653671 8_1:-29871081 Msa1188970:five_prime_UTR
TAGGCAGGCAGTTAGGACCG+AGG 0.670686 8_1:-29869749 Msa1188970:five_prime_UTR
AGAACTCACCATATCAAGTG+GGG 0.690846 8_1:+29870827 None:intergenic
AAATTGGGGAAAGAAGGTGT+AGG 0.709182 8_1:+29871120 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGATTACATGTATCATTT+TGG + chr8_1:29868990-29869009 None:intergenic 20.0%
!! ATTAATTCACATAAGAAATG+AGG + chr8_1:29869016-29869035 None:intergenic 20.0%
!! TTCTTATGTGAATTAATATG+TGG - chr8_1:29869019-29869038 Msa1188970:three_prime_UTR 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr8_1:29869522-29869541 Msa1188970:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr8_1:29869716-29869735 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr8_1:29870029-29870048 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr8_1:29871165-29871184 Msa1188970:five_prime_UTR 20.0%
!!! TAAGATTACATGTATCATTT+TGG + chr8_1:29868990-29869009 None:intergenic 20.0%
!! ATTAATTCACATAAGAAATG+AGG + chr8_1:29869016-29869035 None:intergenic 20.0%
!! TTCTTATGTGAATTAATATG+TGG - chr8_1:29869019-29869038 Msa1188970:three_prime_UTR 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr8_1:29869522-29869541 Msa1188970:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr8_1:29869716-29869735 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr8_1:29870029-29870048 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr8_1:29871165-29871184 Msa1188970:five_prime_UTR 20.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr8_1:29868966-29868985 None:intergenic 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr8_1:29869112-29869131 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr8_1:29869113-29869132 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr8_1:29869164-29869183 Msa1188970:intron 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr8_1:29869165-29869184 Msa1188970:intron 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr8_1:29869249-29869268 Msa1188970:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr8_1:29869433-29869452 Msa1188970:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr8_1:29869510-29869529 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr8_1:29869511-29869530 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr8_1:29869579-29869598 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr8_1:29869587-29869606 Msa1188970:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr8_1:29869627-29869646 Msa1188970:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr8_1:29869726-29869745 Msa1188970:five_prime_UTR 25.0%
!! GACAGAAATTAACTTGAAAT+AGG - chr8_1:29869907-29869926 Msa1188970:five_prime_UTR 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr8_1:29869976-29869995 Msa1188970:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr8_1:29870218-29870237 Msa1188970:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr8_1:29870390-29870409 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr8_1:29870571-29870590 None:intergenic 25.0%
! AATATCTTTATCCCATTCAA+AGG + chr8_1:29870872-29870891 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr8_1:29871156-29871175 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr8_1:29871157-29871176 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr8_1:29871186-29871205 Msa1188970:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr8_1:29871195-29871214 Msa1188970:five_prime_UTR 25.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr8_1:29868966-29868985 None:intergenic 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr8_1:29869112-29869131 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr8_1:29869113-29869132 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr8_1:29869164-29869183 Msa1188970:intron 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr8_1:29869165-29869184 Msa1188970:intron 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr8_1:29869249-29869268 Msa1188970:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr8_1:29869433-29869452 Msa1188970:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr8_1:29869510-29869529 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr8_1:29869511-29869530 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr8_1:29869579-29869598 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr8_1:29869587-29869606 Msa1188970:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr8_1:29869627-29869646 Msa1188970:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr8_1:29869726-29869745 Msa1188970:five_prime_UTR 25.0%
!! GACAGAAATTAACTTGAAAT+AGG - chr8_1:29869907-29869926 Msa1188970:five_prime_UTR 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr8_1:29869976-29869995 Msa1188970:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr8_1:29870218-29870237 Msa1188970:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr8_1:29870390-29870409 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr8_1:29870571-29870590 None:intergenic 25.0%
! AATATCTTTATCCCATTCAA+AGG + chr8_1:29870872-29870891 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr8_1:29871156-29871175 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr8_1:29871157-29871176 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr8_1:29871186-29871205 Msa1188970:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr8_1:29871195-29871214 Msa1188970:five_prime_UTR 25.0%
CAAAGATTGATGAAGTTCAA+AGG + chr8_1:29868967-29868986 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr8_1:29869111-29869130 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr8_1:29869163-29869182 None:intergenic 30.0%
ATACTTGAATTATTGAGCGT+TGG - chr8_1:29869292-29869311 Msa1188970:CDS 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr8_1:29869331-29869350 Msa1188970:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr8_1:29869332-29869351 Msa1188970:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr8_1:29869442-29869461 Msa1188970:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr8_1:29869443-29869462 Msa1188970:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr8_1:29869530-29869549 Msa1188970:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr8_1:29869591-29869610 Msa1188970:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr8_1:29869683-29869702 Msa1188970:five_prime_UTR 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr8_1:29869732-29869751 Msa1188970:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr8_1:29869858-29869877 Msa1188970:intron 30.0%
AATTTCTGTCTTCTTTCTCA+TGG + chr8_1:29869897-29869916 None:intergenic 30.0%
ACTTGAAATAGGATTTGAGA+TGG - chr8_1:29869918-29869937 Msa1188970:five_prime_UTR 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr8_1:29870056-29870075 Msa1188970:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr8_1:29870227-29870246 Msa1188970:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr8_1:29870443-29870462 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr8_1:29870446-29870465 Msa1188970:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr8_1:29870551-29870570 Msa1188970:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr8_1:29870567-29870586 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr8_1:29870567-29870586 Msa1188970:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr8_1:29870572-29870591 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr8_1:29870627-29870646 None:intergenic 30.0%
!!! AACCAATCTTTTTTTCCTTC+CGG + chr8_1:29870655-29870674 None:intergenic 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr8_1:29870753-29870772 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr8_1:29870784-29870803 Msa1188970:intron 30.0%
ATCATCATCATCATCTTCTT+CGG + chr8_1:29870917-29870936 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr8_1:29870951-29870970 Msa1188970:intron 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr8_1:29870996-29871015 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr8_1:29870997-29871016 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr8_1:29871058-29871077 Msa1188970:five_prime_UTR 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr8_1:29871246-29871265 Msa1188970:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr8_1:29871250-29871269 Msa1188970:five_prime_UTR 30.0%
CAAAGATTGATGAAGTTCAA+AGG + chr8_1:29868967-29868986 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr8_1:29869111-29869130 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr8_1:29869163-29869182 None:intergenic 30.0%
ATACTTGAATTATTGAGCGT+TGG - chr8_1:29869292-29869311 Msa1188970:CDS 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr8_1:29869331-29869350 Msa1188970:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr8_1:29869332-29869351 Msa1188970:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr8_1:29869442-29869461 Msa1188970:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr8_1:29869443-29869462 Msa1188970:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr8_1:29869530-29869549 Msa1188970:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr8_1:29869591-29869610 Msa1188970:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr8_1:29869683-29869702 Msa1188970:five_prime_UTR 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr8_1:29869732-29869751 Msa1188970:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr8_1:29869858-29869877 Msa1188970:intron 30.0%
AATTTCTGTCTTCTTTCTCA+TGG + chr8_1:29869897-29869916 None:intergenic 30.0%
ACTTGAAATAGGATTTGAGA+TGG - chr8_1:29869918-29869937 Msa1188970:five_prime_UTR 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr8_1:29870056-29870075 Msa1188970:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr8_1:29870227-29870246 Msa1188970:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr8_1:29870443-29870462 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr8_1:29870446-29870465 Msa1188970:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr8_1:29870551-29870570 Msa1188970:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr8_1:29870567-29870586 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr8_1:29870567-29870586 Msa1188970:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr8_1:29870572-29870591 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr8_1:29870627-29870646 None:intergenic 30.0%
!!! AACCAATCTTTTTTTCCTTC+CGG + chr8_1:29870655-29870674 None:intergenic 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr8_1:29870753-29870772 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr8_1:29870784-29870803 Msa1188970:intron 30.0%
ATCATCATCATCATCTTCTT+CGG + chr8_1:29870917-29870936 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr8_1:29870951-29870970 Msa1188970:intron 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr8_1:29870996-29871015 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr8_1:29870997-29871016 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr8_1:29871058-29871077 Msa1188970:five_prime_UTR 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr8_1:29871246-29871265 Msa1188970:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr8_1:29871250-29871269 Msa1188970:five_prime_UTR 30.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr8_1:29868960-29868979 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr8_1:29869103-29869122 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr8_1:29869130-29869149 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr8_1:29869182-29869201 Msa1188970:intron 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr8_1:29869319-29869338 Msa1188970:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr8_1:29869436-29869455 Msa1188970:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr8_1:29869682-29869701 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr8_1:29869682-29869701 Msa1188970:five_prime_UTR 35.0%
! TGTTCTTGCATTTTCGATCT+TGG - chr8_1:29870277-29870296 Msa1188970:intron 35.0%
AATTGCTGCGTAGGAATATT+CGG - chr8_1:29870349-29870368 Msa1188970:intron 35.0%
! GAATATTCGGTAAAGTACTC+AGG - chr8_1:29870240-29870259 Msa1188970:intron 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr8_1:29870399-29870418 None:intergenic 35.0%
TGGAACACAAATAAAAGGAG+TGG + chr8_1:29870438-29870457 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr8_1:29870582-29870601 Msa1188970:intron 35.0%
AGTATACTTCACACAGTATC+CGG - chr8_1:29870633-29870652 Msa1188970:intron 35.0%
ATCCGGAAGGAAAAAAAGAT+TGG - chr8_1:29870650-29870669 Msa1188970:intron 35.0%
GGAAGGAAAAAAAGATTGGT+TGG - chr8_1:29870654-29870673 Msa1188970:intron 35.0%
! AACTTTAGAAGATAGCAAGC+CGG - chr8_1:29870711-29870730 Msa1188970:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr8_1:29870748-29870767 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr8_1:29870805-29870824 Msa1188970:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr8_1:29870816-29870835 Msa1188970:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr8_1:29871138-29871157 Msa1188970:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr8_1:29871147-29871166 Msa1188970:five_prime_UTR 35.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr8_1:29868960-29868979 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr8_1:29869103-29869122 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr8_1:29869130-29869149 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr8_1:29869182-29869201 Msa1188970:intron 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr8_1:29869319-29869338 Msa1188970:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr8_1:29869436-29869455 Msa1188970:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr8_1:29869682-29869701 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr8_1:29869682-29869701 Msa1188970:five_prime_UTR 35.0%
! TGTTCTTGCATTTTCGATCT+TGG - chr8_1:29870277-29870296 Msa1188970:intron 35.0%
AATTGCTGCGTAGGAATATT+CGG - chr8_1:29870349-29870368 Msa1188970:intron 35.0%
! GAATATTCGGTAAAGTACTC+AGG - chr8_1:29870240-29870259 Msa1188970:intron 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr8_1:29870399-29870418 None:intergenic 35.0%
TGGAACACAAATAAAAGGAG+TGG + chr8_1:29870438-29870457 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr8_1:29870582-29870601 Msa1188970:intron 35.0%
AGTATACTTCACACAGTATC+CGG - chr8_1:29870633-29870652 Msa1188970:intron 35.0%
ATCCGGAAGGAAAAAAAGAT+TGG - chr8_1:29870650-29870669 Msa1188970:intron 35.0%
GGAAGGAAAAAAAGATTGGT+TGG - chr8_1:29870654-29870673 Msa1188970:intron 35.0%
! AACTTTAGAAGATAGCAAGC+CGG - chr8_1:29870711-29870730 Msa1188970:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr8_1:29870748-29870767 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr8_1:29870805-29870824 Msa1188970:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr8_1:29870816-29870835 Msa1188970:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr8_1:29871138-29871157 Msa1188970:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr8_1:29871147-29871166 Msa1188970:five_prime_UTR 35.0%
AGAGGAGTAAGACTGTAAGA+GGG + chr8_1:29868908-29868927 None:intergenic 40.0%
TCTTACTCCTCTCTATCTCT+CGG - chr8_1:29868916-29868935 Msa1188970:three_prime_UTR 40.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr8_1:29868957-29868976 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr8_1:29869097-29869116 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr8_1:29869126-29869145 Msa1188970:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr8_1:29869131-29869150 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr8_1:29869129-29869148 Msa1188970:three_prime_UTR 40.0%
TCAGAGCTCTTGTTCATCAA+TGG - chr8_1:29869356-29869375 Msa1188970:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr8_1:29869390-29869409 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr8_1:29869391-29869410 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr8_1:29869392-29869411 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr8_1:29869448-29869467 Msa1188970:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr8_1:29869449-29869468 Msa1188970:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr8_1:29869469-29869488 Msa1188970:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr8_1:29869539-29869558 Msa1188970:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr8_1:29869561-29869580 Msa1188970:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr8_1:29869639-29869658 Msa1188970:exon 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr8_1:29869654-29869673 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr8_1:29869697-29869716 Msa1188970:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr8_1:29869995-29870014 Msa1188970:intron 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr8_1:29869996-29870015 Msa1188970:intron 40.0%
TGGTATGGAACTTCTTTGTC+CGG + chr8_1:29870733-29870752 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr8_1:29870853-29870872 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr8_1:29870857-29870876 Msa1188970:five_prime_UTR 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr8_1:29870858-29870877 Msa1188970:five_prime_UTR 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr8_1:29871064-29871083 Msa1188970:five_prime_UTR 40.0%
!! TGAAACAAAAAGTGCTGCCA+CGG + chr8_1:29871242-29871261 None:intergenic 40.0%
AGAGGAGTAAGACTGTAAGA+GGG + chr8_1:29868908-29868927 None:intergenic 40.0%
TCTTACTCCTCTCTATCTCT+CGG - chr8_1:29868916-29868935 Msa1188970:three_prime_UTR 40.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr8_1:29868957-29868976 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr8_1:29869097-29869116 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr8_1:29869126-29869145 Msa1188970:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr8_1:29869131-29869150 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr8_1:29869129-29869148 Msa1188970:three_prime_UTR 40.0%
TCAGAGCTCTTGTTCATCAA+TGG - chr8_1:29869356-29869375 Msa1188970:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr8_1:29869390-29869409 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr8_1:29869391-29869410 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr8_1:29869392-29869411 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr8_1:29869448-29869467 Msa1188970:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr8_1:29869449-29869468 Msa1188970:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr8_1:29869469-29869488 Msa1188970:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr8_1:29869539-29869558 Msa1188970:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr8_1:29869561-29869580 Msa1188970:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr8_1:29869639-29869658 Msa1188970:exon 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr8_1:29869654-29869673 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr8_1:29869697-29869716 Msa1188970:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr8_1:29869995-29870014 Msa1188970:intron 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr8_1:29869996-29870015 Msa1188970:intron 40.0%
TGGTATGGAACTTCTTTGTC+CGG + chr8_1:29870733-29870752 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr8_1:29870853-29870872 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr8_1:29870857-29870876 Msa1188970:five_prime_UTR 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr8_1:29870858-29870877 Msa1188970:five_prime_UTR 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr8_1:29871064-29871083 Msa1188970:five_prime_UTR 40.0%
!! TGAAACAAAAAGTGCTGCCA+CGG + chr8_1:29871242-29871261 None:intergenic 40.0%
GAGAGGAGTAAGACTGTAAG+AGG + chr8_1:29868909-29868928 None:intergenic 45.0%
!! TATGGTGGCTTTGGAATGGA+TGG + chr8_1:29868942-29868961 None:intergenic 45.0%
TCAAAGGGTTATGGTGGCTT+TGG + chr8_1:29868951-29868970 None:intergenic 45.0%
! GTAGGACTGTAGGTTTGGTT+GGG + chr8_1:29869079-29869098 None:intergenic 45.0%
! TGTAGGACTGTAGGTTTGGT+TGG + chr8_1:29869080-29869099 None:intergenic 45.0%
AAGGTGTAGGACTGTAGGTT+TGG + chr8_1:29869084-29869103 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr8_1:29869089-29869108 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr8_1:29869133-29869152 Msa1188970:three_prime_UTR 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr8_1:29869264-29869283 Msa1188970:CDS 45.0%
GAGCTCTTGTTCATCAATGG+TGG - chr8_1:29869359-29869378 Msa1188970:CDS 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr8_1:29869379-29869398 Msa1188970:CDS 45.0%
GCGTGTTCGTGCATTTGAAA+CGG - chr8_1:29870304-29870323 Msa1188970:intron 45.0%
! CGTGTTCGTGCATTTGAAAC+GGG - chr8_1:29870305-29870324 Msa1188970:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr8_1:29870340-29870359 Msa1188970:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr8_1:29870450-29870469 Msa1188970:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr8_1:29870458-29870477 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr8_1:29870458-29870477 Msa1188970:intron 45.0%
TACTTCACACAGTATCCGGA+AGG - chr8_1:29870637-29870656 Msa1188970:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr8_1:29870672-29870691 Msa1188970:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr8_1:29870692-29870711 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr8_1:29870826-29870845 Msa1188970:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr8_1:29870843-29870862 Msa1188970:five_prime_UTR 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr8_1:29871070-29871089 Msa1188970:five_prime_UTR 45.0%
GAGAGGAGTAAGACTGTAAG+AGG + chr8_1:29868909-29868928 None:intergenic 45.0%
!! TATGGTGGCTTTGGAATGGA+TGG + chr8_1:29868942-29868961 None:intergenic 45.0%
TCAAAGGGTTATGGTGGCTT+TGG + chr8_1:29868951-29868970 None:intergenic 45.0%
! GTAGGACTGTAGGTTTGGTT+GGG + chr8_1:29869079-29869098 None:intergenic 45.0%
! TGTAGGACTGTAGGTTTGGT+TGG + chr8_1:29869080-29869099 None:intergenic 45.0%
AAGGTGTAGGACTGTAGGTT+TGG + chr8_1:29869084-29869103 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr8_1:29869089-29869108 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr8_1:29869133-29869152 Msa1188970:three_prime_UTR 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr8_1:29869264-29869283 Msa1188970:CDS 45.0%
GAGCTCTTGTTCATCAATGG+TGG - chr8_1:29869359-29869378 Msa1188970:CDS 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr8_1:29869379-29869398 Msa1188970:CDS 45.0%
GCGTGTTCGTGCATTTGAAA+CGG - chr8_1:29870304-29870323 Msa1188970:intron 45.0%
! CGTGTTCGTGCATTTGAAAC+GGG - chr8_1:29870305-29870324 Msa1188970:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr8_1:29870340-29870359 Msa1188970:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr8_1:29870450-29870469 Msa1188970:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr8_1:29870458-29870477 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr8_1:29870458-29870477 Msa1188970:intron 45.0%
TACTTCACACAGTATCCGGA+AGG - chr8_1:29870637-29870656 Msa1188970:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr8_1:29870672-29870691 Msa1188970:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr8_1:29870692-29870711 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr8_1:29870826-29870845 Msa1188970:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr8_1:29870843-29870862 Msa1188970:five_prime_UTR 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr8_1:29871070-29871089 Msa1188970:five_prime_UTR 45.0%
!! ATTAATTAATTAATTAAGAA+TGG + chr8_1:29869240-29869259 None:intergenic 5.0%
!! ATTCTTAATTAATTAATTAA+TGG - chr8_1:29869239-29869258 Msa1188970:intron 5.0%
!! ATTAATTAATTAATTAAGAA+TGG + chr8_1:29869240-29869259 None:intergenic 5.0%
!! ATTCTTAATTAATTAATTAA+TGG - chr8_1:29869239-29869258 Msa1188970:intron 5.0%
!! GGGTTATGGTGGCTTTGGAA+TGG + chr8_1:29868946-29868965 None:intergenic 50.0%
! CTGTAGGTTTGGTTGGGACT+AGG + chr8_1:29869073-29869092 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr8_1:29870492-29870511 Msa1188970:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr8_1:29870837-29870856 Msa1188970:five_prime_UTR 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr8_1:29871076-29871095 Msa1188970:five_prime_UTR 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr8_1:29871205-29871224 Msa1188970:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr8_1:29871216-29871235 Msa1188970:five_prime_UTR 50.0%
!! GGGTTATGGTGGCTTTGGAA+TGG + chr8_1:29868946-29868965 None:intergenic 50.0%
! CTGTAGGTTTGGTTGGGACT+AGG + chr8_1:29869073-29869092 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr8_1:29870492-29870511 Msa1188970:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr8_1:29870837-29870856 Msa1188970:five_prime_UTR 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr8_1:29871076-29871095 Msa1188970:five_prime_UTR 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr8_1:29871205-29871224 Msa1188970:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr8_1:29871216-29871235 Msa1188970:five_prime_UTR 50.0%
TGGATGGCCGAGAGATAGAG+AGG + chr8_1:29868926-29868945 None:intergenic 55.0%
! GGTTTGGTTGGGACTAGGAG+AGG + chr8_1:29869068-29869087 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr8_1:29870473-29870492 Msa1188970:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr8_1:29870485-29870504 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr8_1:29870491-29870510 Msa1188970:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr8_1:29870493-29870512 Msa1188970:intron 55.0%
TGGATGGCCGAGAGATAGAG+AGG + chr8_1:29868926-29868945 None:intergenic 55.0%
! GGTTTGGTTGGGACTAGGAG+AGG + chr8_1:29869068-29869087 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr8_1:29870473-29870492 Msa1188970:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr8_1:29870485-29870504 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr8_1:29870491-29870510 Msa1188970:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr8_1:29870493-29870512 Msa1188970:intron 55.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr8_1:29870465-29870484 Msa1188970:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr8_1:29870477-29870496 Msa1188970:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr8_1:29870478-29870497 Msa1188970:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr8_1:29871082-29871101 Msa1188970:five_prime_UTR 60.0%
GTGCGGTTGTTTAGAGGCCG+TGG - chr8_1:29871222-29871241 Msa1188970:five_prime_UTR 60.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr8_1:29870465-29870484 Msa1188970:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr8_1:29870477-29870496 Msa1188970:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr8_1:29870478-29870497 Msa1188970:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr8_1:29871082-29871101 Msa1188970:five_prime_UTR 60.0%
GTGCGGTTGTTTAGAGGCCG+TGG - chr8_1:29871222-29871241 Msa1188970:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 29868892 29871344 29868892 ID=Msa1188970;Name=Msa1188970
chr8_1 mRNA 29868892 29871344 29868892 ID=Msa1188970-mRNA-1;Parent=Msa1188970;Name=Msa1188970-mRNA-1;_AED=0.01;_eAED=0.01;_QI=685|1|1|1|0|0|5|265|128
chr8_1 exon 29868892 29869156 29868892 ID=Msa1188970-mRNA-1:exon:10508;Parent=Msa1188970-mRNA-1
chr8_1 exon 29869264 29869777 29869264 ID=Msa1188970-mRNA-1:exon:10507;Parent=Msa1188970-mRNA-1
chr8_1 exon 29869866 29869996 29869866 ID=Msa1188970-mRNA-1:exon:10506;Parent=Msa1188970-mRNA-1
chr8_1 exon 29870836 29870950 29870836 ID=Msa1188970-mRNA-1:exon:10505;Parent=Msa1188970-mRNA-1
chr8_1 exon 29871033 29871344 29871033 ID=Msa1188970-mRNA-1:exon:10504;Parent=Msa1188970-mRNA-1
chr8_1 five_prime_UTR 29871033 29871344 29871033 ID=Msa1188970-mRNA-1:five_prime_utr;Parent=Msa1188970-mRNA-1
chr8_1 five_prime_UTR 29870836 29870950 29870836 ID=Msa1188970-mRNA-1:five_prime_utr;Parent=Msa1188970-mRNA-1
chr8_1 five_prime_UTR 29869866 29869996 29869866 ID=Msa1188970-mRNA-1:five_prime_utr;Parent=Msa1188970-mRNA-1
chr8_1 five_prime_UTR 29869651 29869777 29869651 ID=Msa1188970-mRNA-1:five_prime_utr;Parent=Msa1188970-mRNA-1
chr8_1 CDS 29869264 29869650 29869264 ID=Msa1188970-mRNA-1:cds;Parent=Msa1188970-mRNA-1
chr8_1 three_prime_UTR 29868892 29869156 29868892 ID=Msa1188970-mRNA-1:three_prime_utr;Parent=Msa1188970-mRNA-1
Gene Sequence

>Msa1188970

ATGGTGCTGCAAAGTTTGGTTAATGATTTTTGTAAGATCCAAAAACAAGTATACTTCACACAGTATCCGGAAGGAAAAAAAGATTGGTTGGCTGTGATTAAGACCAAGGCGAGAAGCACAATTCAAACTTTAGAAGATAGCAAGCCGGACAAAGAAGTTCCATACCAAGATGAATCAATCACACAATCACACATGACAATTGCAAATGACAATCTTGAAGGAAGTCTTGTTGATTTAGTTGGAGAAGTTGAGGAAGCATACGGTCCTTTCTTGGATGAGGTTACCTTTGAATGGGATAAAGATATTGAAGTAGAAGTAGAAGACAGTGCCGAAGAAGATGATGATGATGATGATGATGATGATGATGATGAAACATATTCTGACTAG
Protein sequence

>Msa1188970

MVLQSLVNDFCKIQKQVYFTQYPEGKKDWLAVIKTKARSTIQTLEDSKPDKEVPYQDESITQSHMTIANDNLEGSLVDLVGEVEEAYGPFLDEVTFEWDKDIEVEVEDSAEEDDDDDDDDDDDETYSD*