AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1188950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 91 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGCAGGGTTGACGATTC+AGG 0.139753 8_1:-29819702 Msa1188950:five_prime_UTR
TAAGATTACATGTATCATTT+TGG 0.226865 8_1:+29821206 None:intergenic
TGTTTCAATTTCTCTACTTT+GGG 0.267804 8_1:-29821028 Msa1188950:five_prime_UTR
CACCACTTCAATGCATGAAT+TGG 0.272830 8_1:+29821065 None:intergenic
GGTGCTTAAAATTTATTATC+TGG 0.297194 8_1:-29819007 Msa1188950:three_prime_UTR
ATTGGGATAAGAAAGAAAAT+TGG 0.309564 8_1:+29821083 None:intergenic
TTGTTTCAATTTCTCTACTT+TGG 0.314070 8_1:-29821029 Msa1188950:five_prime_UTR
TTGGGATAAGAAAGAAAATT+GGG 0.319969 8_1:+29821084 None:intergenic
ATTAATGGTGCTGCAAAGTT+TGG 0.320369 8_1:-29819611 Msa1188950:exon
GGAAGCATACGGTCCTTTCT+TGG 0.323111 8_1:-29819356 Msa1188950:CDS
GGAAGTCTTGTTGATTTAGT+TGG 0.335009 8_1:-29819388 Msa1188950:CDS
GAGAGGAGTAAGACTGTAAG+AGG 0.335721 8_1:+29821287 None:intergenic
TCAAAGGGTTATGGTGGCTT+TGG 0.352518 8_1:+29821245 None:intergenic
GGTTTCGTGCGGTTGTTTAG+AGG 0.356770 8_1:-29818977 Msa1188950:three_prime_UTR
CAGTTAGGACCGAGGCTTCT+TGG 0.357951 8_1:-29819720 Msa1188950:five_prime_UTR
AATTTCTGCGTAGGAATATT+CGG 0.369204 8_1:-29819966 Msa1188950:intron
AAAATACCTTGAAATCCTTT+GGG 0.373281 8_1:+29819040 None:intergenic
TGATGAAGTTCAAAGGGTTA+TGG 0.383423 8_1:+29821236 None:intergenic
GCAAGAACAAGAAGAATAGA+AGG 0.386139 8_1:-29820874 Msa1188950:five_prime_UTR
TTGAATTGTGCTTCTCGCCT+TGG 0.392592 8_1:+29819504 None:intergenic
ATTTGTGTTCCAGATTGTTT+AGG 0.397267 8_1:-29819747 Msa1188950:intron
AAGGTGTAGGACTGTAGGTT+TGG 0.401042 8_1:+29821112 None:intergenic
TGGATGAGGTTACCTTTGAA+TGG 0.410546 8_1:-29819336 Msa1188950:CDS
CTGTAGGTTTGGTTGGGACT+AGG 0.414646 8_1:+29821123 None:intergenic
TAGGACCGAGGCTTCTTGGC+AGG 0.415660 8_1:-29819716 Msa1188950:five_prime_UTR
TGGTATGGAACTTCTTTGTC+CGG 0.423754 8_1:+29819463 None:intergenic
AATTGCTGCGTAGGAATATT+CGG 0.425916 8_1:-29819844 Msa1188950:intron
GTAGGACTGTAGGTTTGGTT+GGG 0.426279 8_1:+29821117 None:intergenic
GATTGTTTAGGCAGGCAGTT+AGG 0.435522 8_1:-29819735 Msa1188950:five_prime_UTR
TTGGCAGGGTTGACGATTCA+GGG 0.436084 8_1:-29819701 Msa1188950:five_prime_UTR
CGTGTTCGTGCATTTGAAAC+GGG 0.440856 8_1:-29819888 Msa1188950:five_prime_UTR
TGGTTCATCCCCACTTGATA+TGG 0.445421 8_1:-29820814 Msa1188950:intron
AGTATACTTCACACAGTATC+CGG 0.453436 8_1:-29819560 Msa1188950:CDS
ACCACTTCAATGCATGAATT+GGG 0.454441 8_1:+29821066 None:intergenic
GGATGAGGTTACCTTTGAAT+GGG 0.455125 8_1:-29819335 Msa1188950:CDS
TTCTTATGTGAATTAATATG+TGG 0.456754 8_1:-29821174 Msa1188950:five_prime_UTR
ATTGCAAATGACAATCTTGA+AGG 0.456999 8_1:-29819409 Msa1188950:CDS
AGAGGTAGAGGCAGCGGAAG+AGG 0.457632 8_1:-29819111 Msa1188950:three_prime_UTR
AGAATAGAAGGAGAAATTGA+AGG 0.460014 8_1:-29820862 Msa1188950:five_prime_UTR
CAAAGATTGATGAAGTTCAA+AGG 0.462763 8_1:+29821229 None:intergenic
GAAAGAAAATTGGGGAAAGA+AGG 0.470391 8_1:+29821093 None:intergenic
TTTGGGTTAAGATGAAGCTT+AGG 0.472756 8_1:-29821011 Msa1188950:intron
AACAAACCCAAAGGATTTCA+AGG 0.473412 8_1:-29819046 Msa1188950:three_prime_UTR
ATTGTGTGATTGATTCATCT+TGG 0.474013 8_1:+29819443 None:intergenic
GCGTGTTCGTGCATTTGAAA+CGG 0.477104 8_1:-29819889 Msa1188950:five_prime_UTR
AAAGATTGATGAAGTTCAAA+GGG 0.477967 8_1:+29821230 None:intergenic
AATATCTTTATCCCATTCAA+AGG 0.483583 8_1:+29819324 None:intergenic
TGTAGGACTGTAGGTTTGGT+TGG 0.492404 8_1:+29821116 None:intergenic
ATACGGTCCTTTCTTGGATG+AGG 0.503815 8_1:-29819350 Msa1188950:CDS
GTGATTGATTCATCTTGGTA+TGG 0.505565 8_1:+29819448 None:intergenic
AATTTATTATCTGGTAGCAT+AGG 0.515942 8_1:-29818998 Msa1188950:three_prime_UTR
GAATAGAAGGAGAAATTGAA+GGG 0.517096 8_1:-29820861 Msa1188950:five_prime_UTR
TCAGAGCTCTTGTTCATCAA+TGG 0.520698 8_1:-29820837 Msa1188950:five_prime_UTR
GGGTTATGGTGGCTTTGGAA+TGG 0.520808 8_1:+29821250 None:intergenic
GTGCGGTTGTTTAGAGGCCG+TGG 0.521598 8_1:-29818971 Msa1188950:three_prime_UTR
AGAGGAGTAAGACTGTAAGA+GGG 0.523370 8_1:+29821288 None:intergenic
TGATTTAGTTGGAGAAGTTG+AGG 0.526516 8_1:-29819377 Msa1188950:CDS
CGAATGTTAGGTAGAGGTAG+AGG 0.532296 8_1:-29819123 Msa1188950:intron
TTAGGTAGAGGTAGAGGCAG+CGG 0.532621 8_1:-29819117 Msa1188950:intron
AGGACCGAGGCTTCTTGGCA+GGG 0.533687 8_1:-29819715 Msa1188950:five_prime_UTR
GTGTTCCAGATTGTTTAGGC+AGG 0.537026 8_1:-29819743 Msa1188950:intron
ATACTTGAATTATTGAGCGT+TGG 0.537283 8_1:-29820901 Msa1188950:five_prime_UTR
ACGTTCTGTAATTGCTGCGT+AGG 0.545882 8_1:-29819853 Msa1188950:five_prime_UTR
TATGGTGGCTTTGGAATGGA+TGG 0.550702 8_1:+29821254 None:intergenic
GGTTTGGTTGGGACTAGGAG+AGG 0.551539 8_1:+29821128 None:intergenic
CAATTCATGCATTGAAGTGG+TGG 0.554056 8_1:-29821064 Msa1188950:five_prime_UTR
AAGGTAACCTCATCCAAGAA+AGG 0.563434 8_1:+29819343 None:intergenic
GAAAGAAGGTGTAGGACTGT+AGG 0.563545 8_1:+29821107 None:intergenic
TCTTACTCCTCTCTATCTCT+CGG 0.575098 8_1:-29821277 Msa1188950:five_prime_UTR
TCAACCCTGCCAAGAAGCCT+CGG 0.575981 8_1:+29819711 None:intergenic
ATTAATTCACATAAGAAATG+AGG 0.577524 8_1:+29821180 None:intergenic
TCCCAATTCATGCATTGAAG+TGG 0.578368 8_1:-29821067 Msa1188950:five_prime_UTR
TGAAGTTCAAAGGGTTATGG+TGG 0.583833 8_1:+29821239 None:intergenic
AGTAGAGAAATTGAAACAAG+AGG 0.594700 8_1:+29821033 None:intergenic
AACTTTAGAAGATAGCAAGC+CGG 0.596054 8_1:-29819482 Msa1188950:CDS
GAGCTCTTGTTCATCAATGG+TGG 0.600072 8_1:-29820834 Msa1188950:five_prime_UTR
AGAGAACTCACCATATCAAG+TGG 0.605853 8_1:+29820804 None:intergenic
TGGATGGCCGAGAGATAGAG+AGG 0.610112 8_1:+29821270 None:intergenic
TGATGAAACATATTCTGACT+AGG 0.610583 8_1:-29819242 Msa1188950:intron
GTTGGCTGTGATTAAGACCA+AGG 0.613774 8_1:-29819521 Msa1188950:CDS
GGAGAAGTTGAGGAAGCATA+CGG 0.617796 8_1:-29819367 Msa1188950:CDS
GAGAACTCACCATATCAAGT+GGG 0.622028 8_1:+29820805 None:intergenic
TGGCAGGGTTGACGATTCAG+GGG 0.627660 8_1:-29819700 Msa1188950:five_prime_UTR
TGGGATAAGAAAGAAAATTG+GGG 0.635478 8_1:+29821085 None:intergenic
CTGGTAGCATAGGTTTCGTG+CGG 0.636336 8_1:-29818988 Msa1188950:three_prime_UTR
TACTTCACACAGTATCCGGA+AGG 0.636948 8_1:-29819556 Msa1188950:CDS
ATCTTCTCAAACAAACCCAA+AGG 0.644202 8_1:-29819055 Msa1188950:three_prime_UTR
TCATGCATTGAAGTGGTGGA+AGG 0.653671 8_1:-29821060 Msa1188950:five_prime_UTR
TAGGCAGGCAGTTAGGACCG+AGG 0.670686 8_1:-29819728 Msa1188950:five_prime_UTR
AGAACTCACCATATCAAGTG+GGG 0.690846 8_1:+29820806 None:intergenic
AAATTGGGGAAAGAAGGTGT+AGG 0.709182 8_1:+29821099 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGATTACATGTATCATTT+TGG + chr8_1:29818969-29818988 None:intergenic 20.0%
!! ATTAATTCACATAAGAAATG+AGG + chr8_1:29818995-29819014 None:intergenic 20.0%
!! TTCTTATGTGAATTAATATG+TGG - chr8_1:29818998-29819017 Msa1188950:three_prime_UTR 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr8_1:29819501-29819520 Msa1188950:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr8_1:29819695-29819714 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr8_1:29820008-29820027 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr8_1:29821144-29821163 Msa1188950:five_prime_UTR 20.0%
!!! TAAGATTACATGTATCATTT+TGG + chr8_1:29818969-29818988 None:intergenic 20.0%
!! ATTAATTCACATAAGAAATG+AGG + chr8_1:29818995-29819014 None:intergenic 20.0%
!! TTCTTATGTGAATTAATATG+TGG - chr8_1:29818998-29819017 Msa1188950:three_prime_UTR 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr8_1:29819501-29819520 Msa1188950:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr8_1:29819695-29819714 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr8_1:29820008-29820027 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr8_1:29821144-29821163 Msa1188950:five_prime_UTR 20.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr8_1:29818945-29818964 None:intergenic 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr8_1:29819091-29819110 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr8_1:29819092-29819111 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr8_1:29819143-29819162 Msa1188950:intron 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr8_1:29819144-29819163 Msa1188950:intron 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr8_1:29819228-29819247 Msa1188950:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr8_1:29819412-29819431 Msa1188950:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr8_1:29819489-29819508 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr8_1:29819490-29819509 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr8_1:29819558-29819577 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr8_1:29819566-29819585 Msa1188950:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr8_1:29819606-29819625 Msa1188950:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr8_1:29819705-29819724 Msa1188950:five_prime_UTR 25.0%
!! GACAGAAATTAACTTGAAAT+AGG - chr8_1:29819886-29819905 Msa1188950:five_prime_UTR 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr8_1:29819955-29819974 Msa1188950:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr8_1:29820197-29820216 Msa1188950:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr8_1:29820369-29820388 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr8_1:29820550-29820569 None:intergenic 25.0%
! AATATCTTTATCCCATTCAA+AGG + chr8_1:29820851-29820870 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr8_1:29821135-29821154 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr8_1:29821136-29821155 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr8_1:29821165-29821184 Msa1188950:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr8_1:29821174-29821193 Msa1188950:five_prime_UTR 25.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr8_1:29818945-29818964 None:intergenic 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr8_1:29819091-29819110 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr8_1:29819092-29819111 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr8_1:29819143-29819162 Msa1188950:intron 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr8_1:29819144-29819163 Msa1188950:intron 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr8_1:29819228-29819247 Msa1188950:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr8_1:29819412-29819431 Msa1188950:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr8_1:29819489-29819508 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr8_1:29819490-29819509 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr8_1:29819558-29819577 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr8_1:29819566-29819585 Msa1188950:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr8_1:29819606-29819625 Msa1188950:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr8_1:29819705-29819724 Msa1188950:five_prime_UTR 25.0%
!! GACAGAAATTAACTTGAAAT+AGG - chr8_1:29819886-29819905 Msa1188950:five_prime_UTR 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr8_1:29819955-29819974 Msa1188950:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr8_1:29820197-29820216 Msa1188950:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr8_1:29820369-29820388 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr8_1:29820550-29820569 None:intergenic 25.0%
! AATATCTTTATCCCATTCAA+AGG + chr8_1:29820851-29820870 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr8_1:29821135-29821154 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr8_1:29821136-29821155 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr8_1:29821165-29821184 Msa1188950:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr8_1:29821174-29821193 Msa1188950:five_prime_UTR 25.0%
CAAAGATTGATGAAGTTCAA+AGG + chr8_1:29818946-29818965 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr8_1:29819090-29819109 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr8_1:29819142-29819161 None:intergenic 30.0%
ATACTTGAATTATTGAGCGT+TGG - chr8_1:29819271-29819290 Msa1188950:CDS 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr8_1:29819310-29819329 Msa1188950:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr8_1:29819311-29819330 Msa1188950:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr8_1:29819421-29819440 Msa1188950:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr8_1:29819422-29819441 Msa1188950:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr8_1:29819509-29819528 Msa1188950:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr8_1:29819570-29819589 Msa1188950:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr8_1:29819662-29819681 Msa1188950:five_prime_UTR 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr8_1:29819711-29819730 Msa1188950:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr8_1:29819837-29819856 Msa1188950:intron 30.0%
AATTTCTGTCTTCTTTCTCA+TGG + chr8_1:29819876-29819895 None:intergenic 30.0%
ACTTGAAATAGGATTTGAGA+TGG - chr8_1:29819897-29819916 Msa1188950:five_prime_UTR 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr8_1:29820035-29820054 Msa1188950:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr8_1:29820206-29820225 Msa1188950:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr8_1:29820422-29820441 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr8_1:29820425-29820444 Msa1188950:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr8_1:29820530-29820549 Msa1188950:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr8_1:29820546-29820565 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr8_1:29820546-29820565 Msa1188950:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr8_1:29820551-29820570 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr8_1:29820606-29820625 None:intergenic 30.0%
!!! AACCAATCTTTTTTTCCTTC+CGG + chr8_1:29820634-29820653 None:intergenic 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr8_1:29820732-29820751 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr8_1:29820763-29820782 Msa1188950:intron 30.0%
ATCATCATCATCATCTTCTT+CGG + chr8_1:29820896-29820915 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr8_1:29820930-29820949 Msa1188950:intron 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr8_1:29820975-29820994 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr8_1:29820976-29820995 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr8_1:29821037-29821056 Msa1188950:five_prime_UTR 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr8_1:29821225-29821244 Msa1188950:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr8_1:29821229-29821248 Msa1188950:five_prime_UTR 30.0%
CAAAGATTGATGAAGTTCAA+AGG + chr8_1:29818946-29818965 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr8_1:29819090-29819109 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr8_1:29819142-29819161 None:intergenic 30.0%
ATACTTGAATTATTGAGCGT+TGG - chr8_1:29819271-29819290 Msa1188950:CDS 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr8_1:29819310-29819329 Msa1188950:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr8_1:29819311-29819330 Msa1188950:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr8_1:29819421-29819440 Msa1188950:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr8_1:29819422-29819441 Msa1188950:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr8_1:29819509-29819528 Msa1188950:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr8_1:29819570-29819589 Msa1188950:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr8_1:29819662-29819681 Msa1188950:five_prime_UTR 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr8_1:29819711-29819730 Msa1188950:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr8_1:29819837-29819856 Msa1188950:intron 30.0%
AATTTCTGTCTTCTTTCTCA+TGG + chr8_1:29819876-29819895 None:intergenic 30.0%
ACTTGAAATAGGATTTGAGA+TGG - chr8_1:29819897-29819916 Msa1188950:five_prime_UTR 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr8_1:29820035-29820054 Msa1188950:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr8_1:29820206-29820225 Msa1188950:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr8_1:29820422-29820441 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr8_1:29820425-29820444 Msa1188950:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr8_1:29820530-29820549 Msa1188950:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr8_1:29820546-29820565 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr8_1:29820546-29820565 Msa1188950:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr8_1:29820551-29820570 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr8_1:29820606-29820625 None:intergenic 30.0%
!!! AACCAATCTTTTTTTCCTTC+CGG + chr8_1:29820634-29820653 None:intergenic 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr8_1:29820732-29820751 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr8_1:29820763-29820782 Msa1188950:intron 30.0%
ATCATCATCATCATCTTCTT+CGG + chr8_1:29820896-29820915 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr8_1:29820930-29820949 Msa1188950:intron 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr8_1:29820975-29820994 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr8_1:29820976-29820995 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr8_1:29821037-29821056 Msa1188950:five_prime_UTR 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr8_1:29821225-29821244 Msa1188950:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr8_1:29821229-29821248 Msa1188950:five_prime_UTR 30.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr8_1:29818939-29818958 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr8_1:29819082-29819101 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr8_1:29819109-29819128 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr8_1:29819161-29819180 Msa1188950:intron 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr8_1:29819298-29819317 Msa1188950:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr8_1:29819415-29819434 Msa1188950:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr8_1:29819661-29819680 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr8_1:29819661-29819680 Msa1188950:five_prime_UTR 35.0%
! TGTTCTTGCATTTTCGATCT+TGG - chr8_1:29820256-29820275 Msa1188950:intron 35.0%
AATTGCTGCGTAGGAATATT+CGG - chr8_1:29820328-29820347 Msa1188950:intron 35.0%
! GAATATTCGGTAAAGTACTC+AGG - chr8_1:29820219-29820238 Msa1188950:intron 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr8_1:29820378-29820397 None:intergenic 35.0%
TGGAACACAAATAAAAGGAG+TGG + chr8_1:29820417-29820436 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr8_1:29820561-29820580 Msa1188950:intron 35.0%
AGTATACTTCACACAGTATC+CGG - chr8_1:29820612-29820631 Msa1188950:intron 35.0%
ATCCGGAAGGAAAAAAAGAT+TGG - chr8_1:29820629-29820648 Msa1188950:intron 35.0%
GGAAGGAAAAAAAGATTGGT+TGG - chr8_1:29820633-29820652 Msa1188950:intron 35.0%
! AACTTTAGAAGATAGCAAGC+CGG - chr8_1:29820690-29820709 Msa1188950:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr8_1:29820727-29820746 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr8_1:29820784-29820803 Msa1188950:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr8_1:29820795-29820814 Msa1188950:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr8_1:29821117-29821136 Msa1188950:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr8_1:29821126-29821145 Msa1188950:five_prime_UTR 35.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr8_1:29818939-29818958 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr8_1:29819082-29819101 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr8_1:29819109-29819128 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr8_1:29819161-29819180 Msa1188950:intron 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr8_1:29819298-29819317 Msa1188950:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr8_1:29819415-29819434 Msa1188950:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr8_1:29819661-29819680 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr8_1:29819661-29819680 Msa1188950:five_prime_UTR 35.0%
! TGTTCTTGCATTTTCGATCT+TGG - chr8_1:29820256-29820275 Msa1188950:intron 35.0%
AATTGCTGCGTAGGAATATT+CGG - chr8_1:29820328-29820347 Msa1188950:intron 35.0%
! GAATATTCGGTAAAGTACTC+AGG - chr8_1:29820219-29820238 Msa1188950:intron 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr8_1:29820378-29820397 None:intergenic 35.0%
TGGAACACAAATAAAAGGAG+TGG + chr8_1:29820417-29820436 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr8_1:29820561-29820580 Msa1188950:intron 35.0%
AGTATACTTCACACAGTATC+CGG - chr8_1:29820612-29820631 Msa1188950:intron 35.0%
ATCCGGAAGGAAAAAAAGAT+TGG - chr8_1:29820629-29820648 Msa1188950:intron 35.0%
GGAAGGAAAAAAAGATTGGT+TGG - chr8_1:29820633-29820652 Msa1188950:intron 35.0%
! AACTTTAGAAGATAGCAAGC+CGG - chr8_1:29820690-29820709 Msa1188950:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr8_1:29820727-29820746 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr8_1:29820784-29820803 Msa1188950:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr8_1:29820795-29820814 Msa1188950:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr8_1:29821117-29821136 Msa1188950:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr8_1:29821126-29821145 Msa1188950:five_prime_UTR 35.0%
AGAGGAGTAAGACTGTAAGA+GGG + chr8_1:29818887-29818906 None:intergenic 40.0%
TCTTACTCCTCTCTATCTCT+CGG - chr8_1:29818895-29818914 Msa1188950:three_prime_UTR 40.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr8_1:29818936-29818955 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr8_1:29819076-29819095 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr8_1:29819105-29819124 Msa1188950:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr8_1:29819110-29819129 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr8_1:29819108-29819127 Msa1188950:three_prime_UTR 40.0%
TCAGAGCTCTTGTTCATCAA+TGG - chr8_1:29819335-29819354 Msa1188950:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr8_1:29819369-29819388 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr8_1:29819370-29819389 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr8_1:29819371-29819390 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr8_1:29819427-29819446 Msa1188950:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr8_1:29819428-29819447 Msa1188950:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr8_1:29819448-29819467 Msa1188950:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr8_1:29819518-29819537 Msa1188950:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr8_1:29819540-29819559 Msa1188950:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr8_1:29819618-29819637 Msa1188950:exon 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr8_1:29819633-29819652 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr8_1:29819676-29819695 Msa1188950:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr8_1:29819974-29819993 Msa1188950:intron 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr8_1:29819975-29819994 Msa1188950:intron 40.0%
TGGTATGGAACTTCTTTGTC+CGG + chr8_1:29820712-29820731 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr8_1:29820832-29820851 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr8_1:29820836-29820855 Msa1188950:five_prime_UTR 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr8_1:29820837-29820856 Msa1188950:five_prime_UTR 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr8_1:29821043-29821062 Msa1188950:five_prime_UTR 40.0%
!! TGAAACAAAAAGTGCTGCCA+CGG + chr8_1:29821221-29821240 None:intergenic 40.0%
AGAGGAGTAAGACTGTAAGA+GGG + chr8_1:29818887-29818906 None:intergenic 40.0%
TCTTACTCCTCTCTATCTCT+CGG - chr8_1:29818895-29818914 Msa1188950:three_prime_UTR 40.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr8_1:29818936-29818955 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr8_1:29819076-29819095 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr8_1:29819105-29819124 Msa1188950:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr8_1:29819110-29819129 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr8_1:29819108-29819127 Msa1188950:three_prime_UTR 40.0%
TCAGAGCTCTTGTTCATCAA+TGG - chr8_1:29819335-29819354 Msa1188950:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr8_1:29819369-29819388 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr8_1:29819370-29819389 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr8_1:29819371-29819390 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr8_1:29819427-29819446 Msa1188950:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr8_1:29819428-29819447 Msa1188950:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr8_1:29819448-29819467 Msa1188950:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr8_1:29819518-29819537 Msa1188950:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr8_1:29819540-29819559 Msa1188950:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr8_1:29819618-29819637 Msa1188950:exon 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr8_1:29819633-29819652 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr8_1:29819676-29819695 Msa1188950:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr8_1:29819974-29819993 Msa1188950:intron 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr8_1:29819975-29819994 Msa1188950:intron 40.0%
TGGTATGGAACTTCTTTGTC+CGG + chr8_1:29820712-29820731 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr8_1:29820832-29820851 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr8_1:29820836-29820855 Msa1188950:five_prime_UTR 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr8_1:29820837-29820856 Msa1188950:five_prime_UTR 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr8_1:29821043-29821062 Msa1188950:five_prime_UTR 40.0%
!! TGAAACAAAAAGTGCTGCCA+CGG + chr8_1:29821221-29821240 None:intergenic 40.0%
GAGAGGAGTAAGACTGTAAG+AGG + chr8_1:29818888-29818907 None:intergenic 45.0%
!! TATGGTGGCTTTGGAATGGA+TGG + chr8_1:29818921-29818940 None:intergenic 45.0%
TCAAAGGGTTATGGTGGCTT+TGG + chr8_1:29818930-29818949 None:intergenic 45.0%
! GTAGGACTGTAGGTTTGGTT+GGG + chr8_1:29819058-29819077 None:intergenic 45.0%
! TGTAGGACTGTAGGTTTGGT+TGG + chr8_1:29819059-29819078 None:intergenic 45.0%
AAGGTGTAGGACTGTAGGTT+TGG + chr8_1:29819063-29819082 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr8_1:29819068-29819087 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr8_1:29819112-29819131 Msa1188950:three_prime_UTR 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr8_1:29819243-29819262 Msa1188950:CDS 45.0%
GAGCTCTTGTTCATCAATGG+TGG - chr8_1:29819338-29819357 Msa1188950:CDS 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr8_1:29819358-29819377 Msa1188950:CDS 45.0%
GCGTGTTCGTGCATTTGAAA+CGG - chr8_1:29820283-29820302 Msa1188950:intron 45.0%
! CGTGTTCGTGCATTTGAAAC+GGG - chr8_1:29820284-29820303 Msa1188950:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr8_1:29820319-29820338 Msa1188950:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr8_1:29820429-29820448 Msa1188950:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr8_1:29820437-29820456 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr8_1:29820437-29820456 Msa1188950:intron 45.0%
TACTTCACACAGTATCCGGA+AGG - chr8_1:29820616-29820635 Msa1188950:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr8_1:29820651-29820670 Msa1188950:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr8_1:29820671-29820690 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr8_1:29820805-29820824 Msa1188950:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr8_1:29820822-29820841 Msa1188950:five_prime_UTR 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr8_1:29821049-29821068 Msa1188950:five_prime_UTR 45.0%
GAGAGGAGTAAGACTGTAAG+AGG + chr8_1:29818888-29818907 None:intergenic 45.0%
!! TATGGTGGCTTTGGAATGGA+TGG + chr8_1:29818921-29818940 None:intergenic 45.0%
TCAAAGGGTTATGGTGGCTT+TGG + chr8_1:29818930-29818949 None:intergenic 45.0%
! GTAGGACTGTAGGTTTGGTT+GGG + chr8_1:29819058-29819077 None:intergenic 45.0%
! TGTAGGACTGTAGGTTTGGT+TGG + chr8_1:29819059-29819078 None:intergenic 45.0%
AAGGTGTAGGACTGTAGGTT+TGG + chr8_1:29819063-29819082 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr8_1:29819068-29819087 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr8_1:29819112-29819131 Msa1188950:three_prime_UTR 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr8_1:29819243-29819262 Msa1188950:CDS 45.0%
GAGCTCTTGTTCATCAATGG+TGG - chr8_1:29819338-29819357 Msa1188950:CDS 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr8_1:29819358-29819377 Msa1188950:CDS 45.0%
GCGTGTTCGTGCATTTGAAA+CGG - chr8_1:29820283-29820302 Msa1188950:intron 45.0%
! CGTGTTCGTGCATTTGAAAC+GGG - chr8_1:29820284-29820303 Msa1188950:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr8_1:29820319-29820338 Msa1188950:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr8_1:29820429-29820448 Msa1188950:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr8_1:29820437-29820456 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr8_1:29820437-29820456 Msa1188950:intron 45.0%
TACTTCACACAGTATCCGGA+AGG - chr8_1:29820616-29820635 Msa1188950:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr8_1:29820651-29820670 Msa1188950:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr8_1:29820671-29820690 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr8_1:29820805-29820824 Msa1188950:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr8_1:29820822-29820841 Msa1188950:five_prime_UTR 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr8_1:29821049-29821068 Msa1188950:five_prime_UTR 45.0%
!! ATTAATTAATTAATTAAGAA+TGG + chr8_1:29819219-29819238 None:intergenic 5.0%
!! ATTCTTAATTAATTAATTAA+TGG - chr8_1:29819218-29819237 Msa1188950:intron 5.0%
!! ATTAATTAATTAATTAAGAA+TGG + chr8_1:29819219-29819238 None:intergenic 5.0%
!! ATTCTTAATTAATTAATTAA+TGG - chr8_1:29819218-29819237 Msa1188950:intron 5.0%
!! GGGTTATGGTGGCTTTGGAA+TGG + chr8_1:29818925-29818944 None:intergenic 50.0%
! CTGTAGGTTTGGTTGGGACT+AGG + chr8_1:29819052-29819071 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr8_1:29820471-29820490 Msa1188950:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr8_1:29820816-29820835 Msa1188950:five_prime_UTR 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr8_1:29821055-29821074 Msa1188950:five_prime_UTR 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr8_1:29821184-29821203 Msa1188950:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr8_1:29821195-29821214 Msa1188950:five_prime_UTR 50.0%
!! GGGTTATGGTGGCTTTGGAA+TGG + chr8_1:29818925-29818944 None:intergenic 50.0%
! CTGTAGGTTTGGTTGGGACT+AGG + chr8_1:29819052-29819071 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr8_1:29820471-29820490 Msa1188950:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr8_1:29820816-29820835 Msa1188950:five_prime_UTR 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr8_1:29821055-29821074 Msa1188950:five_prime_UTR 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr8_1:29821184-29821203 Msa1188950:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr8_1:29821195-29821214 Msa1188950:five_prime_UTR 50.0%
TGGATGGCCGAGAGATAGAG+AGG + chr8_1:29818905-29818924 None:intergenic 55.0%
! GGTTTGGTTGGGACTAGGAG+AGG + chr8_1:29819047-29819066 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr8_1:29820452-29820471 Msa1188950:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr8_1:29820464-29820483 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr8_1:29820470-29820489 Msa1188950:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr8_1:29820472-29820491 Msa1188950:intron 55.0%
TGGATGGCCGAGAGATAGAG+AGG + chr8_1:29818905-29818924 None:intergenic 55.0%
! GGTTTGGTTGGGACTAGGAG+AGG + chr8_1:29819047-29819066 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr8_1:29820452-29820471 Msa1188950:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr8_1:29820464-29820483 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr8_1:29820470-29820489 Msa1188950:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr8_1:29820472-29820491 Msa1188950:intron 55.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr8_1:29820444-29820463 Msa1188950:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr8_1:29820456-29820475 Msa1188950:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr8_1:29820457-29820476 Msa1188950:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr8_1:29821061-29821080 Msa1188950:five_prime_UTR 60.0%
GTGCGGTTGTTTAGAGGCCG+TGG - chr8_1:29821201-29821220 Msa1188950:five_prime_UTR 60.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr8_1:29820444-29820463 Msa1188950:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr8_1:29820456-29820475 Msa1188950:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr8_1:29820457-29820476 Msa1188950:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr8_1:29821061-29821080 Msa1188950:five_prime_UTR 60.0%
GTGCGGTTGTTTAGAGGCCG+TGG - chr8_1:29821201-29821220 Msa1188950:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 29818871 29821323 29818871 ID=Msa1188950;Name=Msa1188950
chr8_1 mRNA 29818871 29821323 29818871 ID=Msa1188950-mRNA-1;Parent=Msa1188950;Name=Msa1188950-mRNA-1;_AED=0.01;_eAED=0.01;_QI=685|1|1|1|0|0|5|265|128
chr8_1 exon 29818871 29819135 29818871 ID=Msa1188950-mRNA-1:exon:10492;Parent=Msa1188950-mRNA-1
chr8_1 exon 29819243 29819756 29819243 ID=Msa1188950-mRNA-1:exon:10491;Parent=Msa1188950-mRNA-1
chr8_1 exon 29819845 29819975 29819845 ID=Msa1188950-mRNA-1:exon:10490;Parent=Msa1188950-mRNA-1
chr8_1 exon 29820815 29820929 29820815 ID=Msa1188950-mRNA-1:exon:10489;Parent=Msa1188950-mRNA-1
chr8_1 exon 29821012 29821323 29821012 ID=Msa1188950-mRNA-1:exon:10488;Parent=Msa1188950-mRNA-1
chr8_1 five_prime_UTR 29821012 29821323 29821012 ID=Msa1188950-mRNA-1:five_prime_utr;Parent=Msa1188950-mRNA-1
chr8_1 five_prime_UTR 29820815 29820929 29820815 ID=Msa1188950-mRNA-1:five_prime_utr;Parent=Msa1188950-mRNA-1
chr8_1 five_prime_UTR 29819845 29819975 29819845 ID=Msa1188950-mRNA-1:five_prime_utr;Parent=Msa1188950-mRNA-1
chr8_1 five_prime_UTR 29819630 29819756 29819630 ID=Msa1188950-mRNA-1:five_prime_utr;Parent=Msa1188950-mRNA-1
chr8_1 CDS 29819243 29819629 29819243 ID=Msa1188950-mRNA-1:cds;Parent=Msa1188950-mRNA-1
chr8_1 three_prime_UTR 29818871 29819135 29818871 ID=Msa1188950-mRNA-1:three_prime_utr;Parent=Msa1188950-mRNA-1
Gene Sequence

>Msa1188950

ATGGTGCTGCAAAGTTTGGTTAATGATTTTTGTAAGATCCAAAAACAAGTATACTTCACACAGTATCCGGAAGGAAAAAAAGATTGGTTGGCTGTGATTAAGACCAAGGCGAGAAGCACAATTCAAACTTTAGAAGATAGCAAGCCGGACAAAGAAGTTCCATACCAAGATGAATCAATCACACAATCACACATGACAATTGCAAATGACAATCTTGAAGGAAGTCTTGTTGATTTAGTTGGAGAAGTTGAGGAAGCATACGGTCCTTTCTTGGATGAGGTTACCTTTGAATGGGATAAAGATATTGAAGTAGAAGTAGAAGACAGTGCCGAAGAAGATGATGATGATGATGATGATGATGATGATGATGAAACATATTCTGACTAG
Protein sequence

>Msa1188950

MVLQSLVNDFCKIQKQVYFTQYPEGKKDWLAVIKTKARSTIQTLEDSKPDKEVPYQDESITQSHMTIANDNLEGSLVDLVGEVEEAYGPFLDEVTFEWDKDIEVEVEDSAEEDDDDDDDDDDDETYSD*