AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0801540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801540 MtrunA17_Chr1g0193801 95.930 172 5 2 388 557 30 201 2.43e-110 337
Msa0801540 MtrunA17_Chr7g0270891 64.593 209 59 4 388 592 30 227 2.05e-81 261
Msa0801540 MtrunA17_Chr1g0193371 75.362 138 29 3 388 522 30 165 1.02e-62 212
Msa0801540 MtrunA17_Chr7g0222441 66.471 170 44 3 105 261 250 419 2.92e-61 214
Msa0801540 MtrunA17_Chr8g0358431 80.992 121 19 1 105 221 27 147 6.90e-60 199
Msa0801540 MtrunA17_Chr8g0341321 73.611 144 27 2 89 221 214 357 1.20e-58 206
Msa0801540 MtrunA17_Chr8g0356771 71.852 135 20 2 105 221 27 161 5.14e-56 187
Msa0801540 MtrunA17_Chr4g0058631 79.612 103 20 1 388 489 30 132 8.59e-53 185
Msa0801540 MtrunA17_Chr1g0211161 65.041 123 38 2 388 509 31 149 3.39e-49 171
Msa0801540 MtrunA17_Chr7g0271241 79.091 110 22 1 388 496 30 139 1.24e-48 174
Msa0801540 MtrunA17_Chr3g0117091 65.041 123 38 2 388 509 30 148 1.74e-48 173
Msa0801540 MtrunA17_Chr4g0055421 88.764 89 9 1 290 377 68 156 2.49e-45 160
Msa0801540 MtrunA17_Chr2g0309911 70.297 101 29 1 388 487 29 129 7.15e-44 159
Msa0801540 MtrunA17_Chr8g0342521 71.717 99 27 1 383 480 25 123 3.23e-43 158
Msa0801540 MtrunA17_Chr7g0217741 63.248 117 39 2 390 502 32 148 9.70e-43 156
Msa0801540 MtrunA17_Chr4g0037141 48.322 149 68 2 390 537 32 172 1.02e-42 155
Msa0801540 MtrunA17_Chr4g0042671 71.134 97 27 1 390 485 32 128 4.48e-42 157
Msa0801540 MtrunA17_Chr8g0342541 50.920 163 60 5 388 536 30 186 4.96e-42 155
Msa0801540 MtrunA17_Chr8g0349261 69.388 98 29 1 391 487 35 132 5.13e-42 154
Msa0801540 MtrunA17_Chr4g0039971 69.072 97 29 1 390 485 33 129 5.14e-42 155
Msa0801540 MtrunA17_Chr5g0395281 66.000 100 33 1 390 488 32 131 5.60e-42 154
Msa0801540 MtrunA17_Chr8g0385321 68.041 97 30 1 391 486 33 129 1.04e-41 153
Msa0801540 MtrunA17_Chr3g0115821 65.347 101 34 1 390 489 32 132 1.44e-41 154
Msa0801540 MtrunA17_Chr6g0453471 62.727 110 40 1 390 498 32 141 2.00e-41 154
Msa0801540 MtrunA17_Chr2g0323411 68.687 99 30 1 388 485 30 128 2.44e-41 152
Msa0801540 MtrunA17_Chr2g0330041 66.346 104 34 1 388 490 30 133 4.87e-41 154
Msa0801540 MtrunA17_Chr5g0434571 56.800 125 47 2 389 506 67 191 7.49e-41 152
Msa0801540 MtrunA17_Chr5g0435101 51.773 141 57 3 389 519 30 169 1.17e-40 147
Msa0801540 MtrunA17_Chr4g0032401 72.222 90 24 1 391 479 38 127 1.35e-40 150
Msa0801540 MtrunA17_Chr3g0110351 68.000 100 31 1 389 487 31 130 2.52e-40 149
Msa0801540 MtrunA17_Chr3g0131121 63.000 100 36 1 390 488 32 131 3.21e-40 149
Msa0801540 MtrunA17_Chr2g0281071 67.010 97 31 1 390 485 33 129 3.27e-40 150
Msa0801540 MtrunA17_Chr4g0044421 58.261 115 44 2 390 500 32 146 3.34e-40 145
Msa0801540 MtrunA17_Chr4g0048511 67.010 97 31 1 390 485 33 129 3.76e-40 150
Msa0801540 MtrunA17_Chr4g0057031 64.356 101 35 1 389 488 31 131 7.39e-40 147
Msa0801540 MtrunA17_Chr5g0410961 64.000 100 35 1 390 488 32 131 1.00e-39 149
Msa0801540 MtrunA17_Chr7g0228891 60.550 109 42 1 391 498 33 141 1.05e-39 146
Msa0801540 MtrunA17_Chr3g0103281 68.317 101 31 1 390 489 32 132 3.64e-39 146
Msa0801540 MtrunA17_Chr5g0417821 62.264 106 39 1 383 487 20 125 1.05e-38 144
Msa0801540 MtrunA17_Chr7g0274581 65.957 94 31 1 383 475 25 118 1.37e-38 141
Msa0801540 MtrunA17_Chr7g0228611 59.504 121 45 1 105 221 180 300 1.44e-38 149
Msa0801540 MtrunA17_Chr1g0203411 70.787 89 25 1 388 475 30 118 1.75e-38 144
Msa0801540 MtrunA17_Chr3g0088461 73.563 87 22 1 389 474 41 127 2.59e-38 145
Msa0801540 MtrunA17_Chr7g0261281 48.366 153 57 3 388 539 30 161 5.62e-38 142
Msa0801540 MtrunA17_Chr6g0452271 60.185 108 42 1 383 489 25 132 9.21e-38 143
Msa0801540 MtrunA17_Chr2g0328771 72.093 86 23 1 391 475 41 126 1.01e-37 142
Msa0801540 MtrunA17_Chr6g0458971 59.504 121 45 1 105 221 183 303 1.07e-37 147
Msa0801540 MtrunA17_Chr8g0342481 76.136 88 19 2 388 473 30 117 1.52e-37 144
Msa0801540 MtrunA17_Chr8g0387421 67.416 89 28 1 388 475 30 118 2.06e-37 141
Msa0801540 MtrunA17_Chr7g0247131 66.292 89 29 1 402 489 10 98 4.06e-37 139
Msa0801540 MtrunA17_Chr1g0187761 68.966 87 26 1 390 475 32 118 4.33e-37 139
Msa0801540 MtrunA17_Chr1g0203441 67.708 96 29 2 390 484 33 127 1.38e-36 138
Msa0801540 MtrunA17_Chr7g0271531 55.385 130 53 2 105 230 270 398 6.86e-36 142
Msa0801540 MtrunA17_Chr3g0121241 62.887 97 35 1 391 486 63 159 1.29e-35 136
Msa0801540 MtrunA17_Chr6g0470971 66.316 95 30 2 390 482 34 128 2.08e-35 135
Msa0801540 MtrunA17_Chr5g0397231 71.605 81 22 1 388 467 30 110 2.43e-35 136
Msa0801540 MtrunA17_Chr1g0167691 67.059 85 27 1 390 473 32 116 1.03e-34 132
Msa0801540 MtrunA17_Chr4g0070641 62.791 86 31 1 390 474 32 117 1.94e-34 128
Msa0801540 MtrunA17_Chr1g0167661 68.235 85 26 1 390 473 32 116 2.38e-34 131
Msa0801540 MtrunA17_Chr4g0022931 50.000 124 61 1 383 505 26 149 5.44e-34 130
Msa0801540 MtrunA17_Chr2g0323351 61.957 92 34 1 383 473 25 116 5.56e-33 127
Msa0801540 MtrunA17_Chr2g0311221 63.636 88 31 1 381 467 25 112 6.51e-33 129
Msa0801540 MtrunA17_Chr4g0022901 63.736 91 32 1 383 472 26 116 1.27e-32 127
Msa0801540 MtrunA17_Chr8g0346561 63.218 87 31 1 390 475 32 118 2.03e-32 127
Msa0801540 MtrunA17_Chr7g0275911 60.227 88 34 1 390 476 32 119 2.44e-32 125
Msa0801540 MtrunA17_Chr4g0070611 62.791 86 31 1 390 474 32 117 3.36e-32 126
Msa0801540 MtrunA17_Chr1g0151941 46.715 137 65 5 389 523 31 161 3.22e-31 122
Msa0801540 MtrunA17_Chr4g0068061 67.059 85 27 1 390 473 32 116 3.84e-31 124
Msa0801540 MtrunA17_Chr4g0022911 59.341 91 36 1 383 472 26 116 4.03e-31 123
Msa0801540 MtrunA17_Chr3g0099131 62.921 89 32 1 388 475 59 147 1.06e-30 126
Msa0801540 MtrunA17_Chr1g0194951 66.667 84 27 1 391 473 33 116 2.25e-30 123
Msa0801540 MtrunA17_Chr7g0228231 56.250 96 38 2 381 475 28 120 5.51e-30 117
Msa0801540 MtrunA17_Chr1g0154031 60.215 93 36 1 383 474 89 181 5.71e-30 122
Msa0801540 MtrunA17_Chr4g0022891 42.953 149 74 3 390 527 32 180 7.33e-30 118
Msa0801540 MtrunA17_Chr8g0354661 64.706 85 29 1 391 474 58 142 9.45e-30 124
Msa0801540 MtrunA17_Chr8g0342531 83.333 60 10 0 388 447 30 89 1.89e-29 114
Msa0801540 MtrunA17_Chr6g0450101 56.250 96 38 2 381 475 28 120 1.95e-29 115
Msa0801540 MtrunA17_Chr4g0022881 57.778 90 37 1 383 471 25 114 2.02e-29 116
Msa0801540 MtrunA17_Chr8g0343831 57.955 88 36 1 390 476 28 115 4.27e-29 116
Msa0801540 MtrunA17_Chr8g0342511 82.759 58 10 0 388 445 30 87 5.20e-29 110
Msa0801540 MtrunA17_Chr4g0055981 61.905 84 31 1 390 472 75 158 5.21e-29 115
Msa0801540 MtrunA17_Chr7g0240821 62.353 85 31 1 390 473 21 105 1.20e-28 114
Msa0801540 MtrunA17_Chr1g0186061 63.095 84 30 1 390 472 40 123 1.66e-28 114
Msa0801540 MtrunA17_Chr3g0080861 58.140 86 35 1 390 474 57 142 1.81e-28 119
Msa0801540 MtrunA17_Chr1g0152011 63.415 82 29 1 393 473 36 117 2.56e-28 116
Msa0801540 MtrunA17_Chr4g0028311 63.415 82 29 1 393 473 36 117 2.71e-28 115
Msa0801540 MtrunA17_Chr1g0168661 60.465 86 33 1 390 474 41 126 9.54e-28 112
Msa0801540 MtrunA17_Chr7g0217221 56.322 87 37 1 390 475 32 118 1.02e-27 112
Msa0801540 MtrunA17_Chr5g0400821 60.000 85 33 1 393 476 36 120 1.15e-27 113
Msa0801540 MtrunA17_Chr1g0151621 54.255 94 42 1 290 382 107 200 1.57e-27 111
Msa0801540 MtrunA17_Chr1g0209661 54.945 91 40 1 390 479 47 137 1.75e-27 113
Msa0801540 MtrunA17_Chr3g0092401 57.471 87 36 1 390 475 33 119 1.81e-27 113
Msa0801540 MtrunA17_Chr3g0135311 59.756 82 32 1 393 473 36 117 1.85e-27 114
Msa0801540 MtrunA17_Chr4g0060721 51.376 109 49 3 390 494 33 141 2.86e-27 113
Msa0801540 MtrunA17_Chr7g0269831 57.009 107 44 2 391 495 33 139 5.45e-27 112
Msa0801540 MtrunA17_Chr7g0254411 54.255 94 40 2 390 480 32 125 5.91e-27 112
Msa0801540 MtrunA17_Chr3g0102821 58.427 89 36 1 290 377 83 171 7.41e-27 108
Msa0801540 MtrunA17_Chr5g0434831 57.647 85 35 1 390 473 27 111 9.44e-27 107
Msa0801540 MtrunA17_Chr4g0076551 56.180 89 38 1 290 377 84 172 9.66e-27 108
Msa0801540 MtrunA17_Chr3g0093811 42.384 151 82 2 402 547 14 164 1.15e-26 109
Msa0801540 MtrunA17_Chr2g0322521 62.791 86 31 1 390 474 49 134 1.19e-26 112
Msa0801540 MtrunA17_Chr4g0054391 65.333 75 25 1 393 466 36 110 1.22e-26 110
Msa0801540 MtrunA17_Chr2g0327351 64.474 76 26 1 393 467 36 111 1.31e-26 110
Msa0801540 MtrunA17_Chr1g0180391 52.174 115 47 3 388 500 37 145 1.34e-26 108
Msa0801540 MtrunA17_Chr8g0342461 78.689 61 12 1 388 447 30 90 1.73e-26 105
Msa0801540 MtrunA17_Chr5g0434931 55.294 85 37 1 390 473 55 139 2.75e-26 108
Msa0801540 MtrunA17_Chr5g0446931 57.303 89 37 1 290 377 83 171 4.29e-26 107
Msa0801540 MtrunA17_Chr1g0194301 50.000 106 49 2 375 479 41 143 4.95e-26 108
Msa0801540 MtrunA17_Chr5g0434911 56.471 85 36 1 390 473 41 125 5.27e-26 108
Msa0801540 MtrunA17_Chr8g0342471 77.049 61 13 1 388 447 30 90 5.57e-26 103
Msa0801540 MtrunA17_Chr8g0360111 57.831 83 34 1 388 469 43 125 6.03e-26 107
Msa0801540 MtrunA17_Chr6g0453211 59.494 79 31 1 390 467 32 110 7.99e-26 108
Msa0801540 MtrunA17_Chr1g0194291 52.688 93 43 1 388 479 39 131 9.61e-26 107
Msa0801540 MtrunA17_Chr1g0192411 56.977 86 36 1 390 474 32 117 1.29e-25 109
Msa0801540 MtrunA17_Chr6g0487491 57.303 89 29 2 393 472 36 124 1.80e-25 106
Msa0801540 MtrunA17_Chr4g0072751 60.526 76 29 1 393 467 36 111 3.27e-25 107
Msa0801540 MtrunA17_Chr7g0264641 57.317 82 34 1 393 473 36 117 4.29e-25 105
Msa0801540 MtrunA17_Chr4g0042611 62.500 64 24 0 383 446 25 88 4.72e-25 99.4
Msa0801540 MtrunA17_Chr7g0220341 54.444 90 38 2 390 476 45 134 1.03e-24 104
Msa0801540 MtrunA17_Chr5g0434841 54.118 85 38 1 390 473 40 124 1.39e-24 105
Msa0801540 MtrunA17_Chr8g0346911 48.454 97 49 1 291 386 92 188 3.62e-24 101
Msa0801540 MtrunA17_Chr7g0228991 54.118 85 38 1 390 473 49 133 4.45e-24 102
Msa0801540 MtrunA17_Chr4g0068921 49.533 107 50 2 374 479 31 134 4.79e-24 100
Msa0801540 MtrunA17_Chr3g0099141 63.077 65 24 0 388 452 58 122 5.21e-24 98.2
Msa0801540 MtrunA17_Chr4g0063121 41.497 147 86 0 295 441 31 177 5.58e-24 100
Msa0801540 MtrunA17_Chr5g0440781 42.609 115 63 3 390 502 32 145 9.06e-24 99.0
Msa0801540 MtrunA17_Chr2g0327821 51.136 88 42 1 390 476 26 113 1.41e-23 100
Msa0801540 MtrunA17_Chr5g0440761 42.609 115 63 3 390 502 32 145 1.67e-23 100
Msa0801540 MtrunA17_Chr2g0293911 49.533 107 50 2 374 479 31 134 2.11e-23 101
Msa0801540 MtrunA17_Chr5g0441141 42.609 115 63 3 390 502 32 145 2.44e-23 100
Msa0801540 MtrunA17_Chr8g0388331 44.211 95 53 0 292 386 71 165 2.84e-23 98.2
Msa0801540 MtrunA17_Chr4g0030881 49.474 95 40 2 390 476 27 121 3.29e-23 99.8
Msa0801540 MtrunA17_Chr2g0323321 58.824 68 28 0 383 450 24 91 1.10e-22 93.6
Msa0801540 MtrunA17_Chr8g0341941 49.438 89 44 1 290 377 113 201 1.25e-22 97.8
Msa0801540 MtrunA17_Chr2g0294811 71.429 56 16 0 391 446 33 88 5.18e-22 91.7
Msa0801540 MtrunA17_Chr8g0334881 52.874 87 39 2 390 474 30 116 2.50e-21 95.5
Msa0801540 MtrunA17_Chr4g0013361 46.281 121 58 5 390 506 30 147 3.03e-21 94.7
Msa0801540 MtrunA17_Chr5g0434901 57.353 68 28 1 404 470 7 74 4.49e-21 89.0
Msa0801540 MtrunA17_Chr5g0395221 64.912 57 20 0 390 446 32 88 5.33e-21 87.8
Msa0801540 MtrunA17_Chr2g0290761 45.783 83 45 0 295 377 92 174 1.25e-20 90.9
Msa0801540 MtrunA17_Chr5g0441131 46.237 93 47 3 390 480 29 120 1.55e-20 89.7
Msa0801540 MtrunA17_Chr2g0290771 48.193 83 43 0 295 377 54 136 1.59e-20 89.7
Msa0801540 MtrunA17_Chr1g0187121 69.014 71 11 1 566 625 163 233 2.43e-20 93.6
Msa0801540 MtrunA17_Chr7g0229101 57.143 70 29 1 402 470 4 73 7.04e-20 88.6
Msa0801540 MtrunA17_Chr2g0290751 44.578 83 46 0 295 377 92 174 7.57e-20 88.6
Msa0801540 MtrunA17_Chr7g0229131 53.425 73 33 1 402 473 4 76 3.95e-19 85.1
Msa0801540 MtrunA17_Chr4g0008551 41.007 139 72 5 388 522 54 186 4.23e-19 89.4
Msa0801540 MtrunA17_Chr2g0290781 44.578 83 46 0 295 377 94 176 4.18e-18 84.0
Msa0801540 MtrunA17_Chr6g0453751 60.000 60 23 1 395 453 53 112 1.97e-17 79.3
Msa0801540 MtrunA17_Chr5g0429661 44.048 84 45 2 390 472 140 222 2.27e-17 84.3
Msa0801540 MtrunA17_Chr4g0053431 50.000 84 40 2 390 472 23 105 3.83e-17 82.0
Msa0801540 MtrunA17_Chr1g0177901 40.000 110 55 4 391 491 13 120 9.34e-17 79.7
Msa0801540 MtrunA17_Chr3g0117511 34.058 138 80 4 406 538 216 347 1.15e-16 82.8
Msa0801540 MtrunA17_Chr3g0133601 55.882 68 29 1 406 472 70 137 1.54e-16 79.3
Msa0801540 MtrunA17_Chr6g0460661 36.893 103 59 3 383 484 30 127 1.64e-16 77.4
Msa0801540 MtrunA17_Chr5g0401731 43.878 98 53 2 390 486 33 129 1.90e-16 80.9
Msa0801540 MtrunA17_Chr7g0228401 40.860 93 53 2 377 468 284 375 2.01e-16 82.4
Msa0801540 MtrunA17_Chr7g0238631 48.235 85 42 2 390 473 131 214 2.57e-16 82.4
Msa0801540 MtrunA17_Chr6g0454921 44.086 93 50 2 390 481 33 124 1.26e-15 76.3
Msa0801540 MtrunA17_Chr3g0139671 44.706 85 45 2 390 473 103 186 1.46e-15 80.5
Msa0801540 MtrunA17_Chr5g0425591 49.231 65 32 1 390 453 29 93 1.59e-15 72.4
Msa0801540 MtrunA17_Chr6g0480581 40.449 89 51 2 389 476 21 108 1.68e-15 76.6
Msa0801540 MtrunA17_Chr4g0058991 40.449 89 49 3 390 476 227 313 4.02e-15 78.2
Msa0801540 MtrunA17_Chr4g0042501 40.909 88 50 2 390 476 123 209 8.60e-15 77.0
Msa0801540 MtrunA17_Chr5g0417621 39.773 88 51 2 390 476 152 238 1.00e-14 77.0
Msa0801540 MtrunA17_Chr5g0437321 53.846 65 29 1 406 469 52 116 1.02e-14 75.1
Msa0801540 MtrunA17_Chr1g0157731 43.529 85 46 2 390 473 109 192 1.17e-14 77.8
Msa0801540 MtrunA17_Chr7g0238651 35.644 101 56 2 390 481 25 125 2.86e-14 74.7
Msa0801540 MtrunA17_Chr6g0460671 45.205 73 39 1 390 462 117 188 5.79e-14 73.9
Msa0801540 MtrunA17_Chr7g0228531 39.773 88 50 3 390 476 238 323 1.41e-13 73.2
Msa0801540 MtrunA17_Chr7g0233061 40.278 72 41 2 406 476 211 281 7.34e-13 70.5
Msa0801540 MtrunA17_Chr3g0125801 42.697 89 47 3 390 476 34 120 1.06e-12 69.3
Msa0801540 MtrunA17_Chr7g0254261 42.045 88 49 2 390 476 107 193 1.28e-12 69.7
Msa0801540 MtrunA17_Chr3g0126811 64.583 48 16 1 290 336 69 116 2.47e-12 64.3
Msa0801540 MtrunA17_Chr5g0397841 43.590 78 42 2 390 466 128 204 3.90e-12 68.9
Msa0801540 MtrunA17_Chr5g0395231 57.692 52 21 1 435 485 4 55 1.30e-11 65.1
Msa0801540 MtrunA17_Chr7g0228481 38.776 98 52 5 384 477 234 327 1.41e-11 67.0
Msa0801540 MtrunA17_Chr2g0299161 85.714 35 5 0 256 290 442 476 1.90e-11 67.4
Msa0801540 MtrunA17_Chr5g0399921 60.417 48 18 1 290 336 67 114 5.01e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801540 AT4G01680.3 78.049 123 25 2 388 509 30 151 1.07e-60 202
Msa0801540 AT4G01680.1 78.049 123 25 2 388 509 30 151 1.93e-59 202
Msa0801540 AT5G13110.1 84.298 121 15 1 105 221 251 371 2.65e-59 209
Msa0801540 AT1G24280.1 84.298 121 15 1 105 221 254 374 3.01e-59 209
Msa0801540 AT1G57560.1 78.448 116 22 2 388 500 30 145 3.81e-57 196
Msa0801540 AT5G35790.1 81.818 121 18 1 105 221 232 352 1.95e-56 201
Msa0801540 AT1G57560.2 83.654 104 16 1 388 490 30 133 2.90e-56 192
Msa0801540 AT4G01680.2 71.111 135 25 3 388 509 30 163 4.44e-56 194
Msa0801540 AT1G09540.1 83.654 104 16 1 388 490 30 133 4.46e-55 192
Msa0801540 AT5G26660.1 83.000 100 16 1 388 486 30 129 2.00e-53 187
Msa0801540 AT5G26660.2 82.759 87 14 1 401 486 12 98 8.51e-45 162
Msa0801540 AT3G12720.1 70.103 97 28 1 388 483 40 136 3.52e-44 160
Msa0801540 AT5G16600.1 47.531 162 74 3 389 544 31 187 6.58e-44 160
Msa0801540 AT4G34990.1 57.627 118 48 2 389 505 31 147 5.24e-43 156
Msa0801540 AT1G66230.1 64.035 114 40 1 389 501 31 144 5.35e-43 156
Msa0801540 AT5G16770.4 66.000 100 33 1 390 488 32 131 6.46e-43 157
Msa0801540 AT5G16770.3 66.000 100 33 1 390 488 32 131 6.46e-43 157
Msa0801540 AT5G16770.1 66.000 100 33 1 390 488 32 131 1.72e-42 156
Msa0801540 AT5G16770.2 66.000 100 33 1 390 488 32 131 1.72e-42 156
Msa0801540 AT3G61250.1 65.714 105 35 1 383 486 25 129 2.08e-42 155
Msa0801540 AT4G38620.1 44.199 181 86 4 383 556 25 197 3.31e-42 154
Msa0801540 AT3G02940.2 65.000 100 34 1 390 488 32 131 4.87e-42 154
Msa0801540 AT5G15310.4 67.327 101 32 1 390 489 32 132 6.69e-42 152
Msa0801540 AT1G74430.1 65.657 99 33 1 390 487 32 130 8.38e-42 152
Msa0801540 AT3G02940.1 65.000 100 34 1 390 488 32 131 1.12e-41 154
Msa0801540 AT3G02940.3 65.000 100 34 1 390 488 32 131 1.12e-41 154
Msa0801540 AT5G15310.2 67.327 101 32 1 390 489 32 132 1.18e-41 154
Msa0801540 AT5G15310.1 67.327 101 32 1 390 489 32 132 1.30e-41 154
Msa0801540 AT4G09460.1 52.143 140 66 1 390 528 32 171 1.77e-41 150
Msa0801540 AT5G65230.1 67.000 100 32 1 390 488 32 131 2.12e-41 152
Msa0801540 AT4G22680.1 62.857 105 38 1 389 492 31 135 5.00e-41 150
Msa0801540 AT5G10280.1 64.356 101 35 1 390 489 32 132 5.27e-41 152
Msa0801540 AT3G13890.2 76.744 86 19 1 389 473 31 116 5.39e-41 153
Msa0801540 AT5G60890.1 59.821 112 43 2 390 499 32 143 5.59e-41 151
Msa0801540 AT2G16720.1 62.136 103 38 1 389 490 31 133 6.97e-41 150
Msa0801540 AT5G14340.1 43.889 180 92 4 391 568 45 217 7.23e-41 150
Msa0801540 AT4G05100.1 67.010 97 31 1 390 485 33 129 8.20e-41 151
Msa0801540 AT4G12350.1 65.686 102 34 1 389 489 31 132 1.03e-40 150
Msa0801540 AT3G01140.2 67.327 101 32 1 390 489 32 132 1.52e-40 151
Msa0801540 AT4G28110.1 67.010 97 31 1 390 485 32 128 1.66e-40 149
Msa0801540 AT4G21440.1 67.010 97 31 1 390 485 32 128 2.28e-40 151
Msa0801540 AT3G01140.1 67.327 101 32 1 390 489 75 175 3.73e-40 151
Msa0801540 AT5G07700.1 52.027 148 55 3 390 521 32 179 7.71e-40 149
Msa0801540 AT5G07700.2 52.027 148 55 3 390 521 32 179 7.71e-40 149
Msa0801540 AT1G22640.1 62.000 100 37 1 390 488 32 131 1.27e-39 146
Msa0801540 AT4G17785.2 62.500 112 35 2 375 485 24 129 1.51e-39 149
Msa0801540 AT4G17785.1 62.500 112 35 2 375 485 24 129 1.95e-39 149
Msa0801540 AT5G56110.1 68.317 101 31 1 390 489 32 132 2.30e-39 147
Msa0801540 AT1G34670.1 64.356 101 35 1 390 489 32 132 3.89e-39 148
Msa0801540 AT5G61420.2 63.107 103 37 1 390 491 32 134 5.78e-39 147
Msa0801540 AT5G12870.1 74.419 86 21 1 391 475 39 124 6.01e-39 145
Msa0801540 AT5G40760.2 60.331 121 44 1 105 221 180 300 6.93e-39 150
Msa0801540 AT5G40760.1 60.331 121 44 1 105 221 180 300 6.93e-39 150
Msa0801540 AT1G18710.1 63.265 98 33 2 392 486 32 129 7.23e-39 144
Msa0801540 AT3G27300.1 60.331 121 44 1 105 221 181 301 7.74e-39 150
Msa0801540 AT3G27300.3 60.331 121 44 1 105 221 181 301 7.74e-39 150
Msa0801540 AT3G27300.2 60.331 121 44 1 105 221 181 301 7.74e-39 150
Msa0801540 AT1G63910.1 64.646 99 34 1 388 485 30 128 1.58e-38 146
Msa0801540 AT1G18570.1 63.636 99 35 1 390 487 33 131 1.76e-38 145
Msa0801540 AT5G54230.1 65.306 98 33 1 389 485 31 128 1.94e-38 145
Msa0801540 AT3G27300.5 60.331 121 44 1 105 221 235 355 2.14e-38 150
Msa0801540 AT3G27300.4 60.331 121 44 1 105 221 252 372 2.48e-38 150
Msa0801540 AT5G07690.1 62.037 108 40 1 390 496 32 139 3.00e-38 145
Msa0801540 AT3G13890.1 69.474 95 19 2 389 473 31 125 4.21e-38 145
Msa0801540 AT1G74080.1 63.265 98 35 1 390 486 32 129 3.19e-37 142
Msa0801540 AT5G62320.1 61.165 103 39 1 394 495 44 146 3.82e-37 139
Msa0801540 AT3G08500.1 72.414 87 23 1 389 474 49 135 6.63e-37 141
Msa0801540 AT1G35515.1 62.000 100 37 1 390 488 32 131 6.99e-37 137
Msa0801540 AT3G13540.1 63.918 97 34 1 391 486 44 140 8.09e-37 138
Msa0801540 AT3G23250.1 48.000 150 65 4 390 538 32 169 1.02e-36 139
Msa0801540 AT5G47100.2 76.136 88 20 1 290 376 68 155 1.10e-36 135
Msa0801540 AT4G17615.2 74.157 89 22 1 290 377 26 114 3.92e-36 134
Msa0801540 AT4G17615.4 74.157 89 22 1 290 377 68 156 3.98e-36 135
Msa0801540 AT4G17615.1 74.157 89 22 1 290 377 68 156 3.98e-36 135
Msa0801540 AT4G17615.5 74.157 89 22 1 290 377 68 156 3.98e-36 135
Msa0801540 AT5G47100.1 55.725 131 36 2 290 419 68 177 4.22e-36 135
Msa0801540 AT4G17615.3 74.157 89 22 1 290 377 68 156 6.42e-36 135
Msa0801540 AT1G16490.1 59.130 115 42 3 391 500 35 149 2.17e-35 135
Msa0801540 AT2G31180.1 47.682 151 73 3 390 536 32 180 2.95e-35 134
Msa0801540 AT3G28470.1 61.111 108 41 1 383 489 25 132 2.96e-35 135
Msa0801540 AT1G79180.1 63.542 96 34 1 381 475 25 120 3.84e-35 135
Msa0801540 AT1G06180.1 66.667 87 28 1 390 475 32 118 4.64e-34 130
Msa0801540 AT5G35550.1 45.810 179 79 5 388 561 32 197 5.48e-34 130
Msa0801540 AT1G09420.2 54.074 135 53 4 105 233 295 426 1.85e-33 136
Msa0801540 AT1G56160.1 68.235 85 26 1 390 473 34 118 4.18e-33 129
Msa0801540 AT1G09420.1 53.435 131 53 3 105 230 295 422 7.35e-33 134
Msa0801540 AT3G48920.1 66.265 83 27 1 390 471 38 120 8.52e-33 127
Msa0801540 AT3G12820.1 67.857 84 26 1 391 473 35 118 1.52e-32 126
Msa0801540 AT4G25560.1 67.059 85 27 1 389 472 29 113 1.71e-31 124
Msa0801540 AT5G52260.1 71.084 83 23 1 391 472 33 115 6.26e-31 122
Msa0801540 AT3G62610.1 65.116 86 29 1 389 473 31 116 7.01e-31 124
Msa0801540 AT2G47460.1 64.773 88 30 1 389 475 31 118 1.17e-30 124
Msa0801540 AT5G49330.1 66.279 86 28 1 389 473 31 116 1.83e-30 123
Msa0801540 AT5G06100.1 63.953 86 30 1 390 474 52 137 4.64e-30 124
Msa0801540 AT3G27810.1 54.545 99 41 2 381 478 34 129 4.65e-30 118
Msa0801540 AT3G01530.1 52.083 96 45 1 390 484 45 140 5.65e-30 117
Msa0801540 AT5G55020.1 62.791 86 31 1 391 475 47 132 6.63e-30 124
Msa0801540 AT5G40350.1 55.102 98 40 2 381 477 31 125 7.03e-30 117
Msa0801540 AT5G14750.1 57.647 85 35 1 390 473 36 120 7.20e-30 117
Msa0801540 AT5G52600.1 44.697 132 57 3 389 504 31 162 7.24e-30 117
Msa0801540 AT2G26960.1 54.639 97 42 2 383 478 33 128 1.00e-29 122
Msa0801540 AT3G11440.2 61.628 86 32 1 390 474 61 146 1.09e-29 123
Msa0801540 AT5G40330.1 56.977 86 36 1 389 473 31 116 1.19e-29 117
Msa0801540 AT5G06100.5 63.953 86 30 1 390 474 52 137 1.23e-29 123
Msa0801540 AT5G06100.2 63.953 86 30 1 390 474 52 137 1.23e-29 123
Msa0801540 AT5G06100.3 63.953 86 30 1 390 474 52 137 1.23e-29 123
Msa0801540 AT5G06100.4 63.953 86 30 1 390 474 52 137 1.23e-29 123
Msa0801540 AT4G26930.1 50.427 117 53 4 390 505 39 151 1.61e-29 121
Msa0801540 AT3G11440.3 61.628 86 32 1 390 474 61 146 3.09e-29 122
Msa0801540 AT3G11440.4 61.628 86 32 1 390 474 61 146 3.09e-29 122
Msa0801540 AT3G11440.1 61.628 86 32 1 390 474 61 146 3.09e-29 122
Msa0801540 AT2G32460.1 59.302 86 34 1 390 474 38 123 3.66e-29 122
Msa0801540 AT2G32460.2 59.302 86 34 1 390 474 26 111 3.77e-29 121
Msa0801540 AT1G79180.2 46.512 129 35 2 381 475 25 153 4.11e-29 118
Msa0801540 AT5G62470.2 50.435 115 49 2 390 503 32 139 6.04e-29 119
Msa0801540 AT3G49690.1 62.353 85 31 1 393 476 36 120 8.05e-29 117
Msa0801540 AT3G47600.1 58.621 87 35 1 390 475 32 118 2.23e-28 116
Msa0801540 AT5G65790.1 61.176 85 32 1 393 476 36 120 2.24e-28 117
Msa0801540 AT3G27920.1 52.128 94 43 2 382 473 25 118 4.41e-28 113
Msa0801540 AT1G74650.1 61.176 85 32 1 390 473 32 116 4.52e-28 115
Msa0801540 AT4G13480.1 62.069 87 32 1 389 474 25 111 5.02e-28 114
Msa0801540 AT5G57620.1 58.889 90 34 2 393 479 36 125 8.80e-28 115
Msa0801540 AT3G24310.1 61.628 86 32 1 390 474 38 123 1.57e-27 112
Msa0801540 AT1G25340.1 44.275 131 58 4 391 508 39 167 2.09e-27 112
Msa0801540 AT1G08810.1 56.044 91 39 1 390 479 32 122 2.09e-27 112
Msa0801540 AT5G62470.1 50.435 115 48 3 390 503 32 138 2.44e-27 114
Msa0801540 AT5G23000.1 61.628 86 31 2 390 473 32 117 2.59e-27 113
Msa0801540 AT3G28910.1 57.143 91 38 1 390 479 32 122 3.36e-27 113
Msa0801540 AT3G30210.1 54.455 101 45 1 388 487 45 145 4.31e-27 111
Msa0801540 AT3G12820.2 66.667 72 23 1 406 476 2 73 5.28e-27 108
Msa0801540 AT2G36890.1 55.435 92 40 1 393 483 36 127 6.10e-27 111
Msa0801540 AT5G35550.2 44.512 164 73 5 403 561 50 200 6.21e-27 110
Msa0801540 AT4G37780.1 41.667 168 84 6 395 561 38 192 6.94e-27 111
Msa0801540 AT2G36890.2 55.435 92 40 1 393 483 77 168 1.16e-26 112
Msa0801540 AT5G24270.3 51.961 102 44 2 291 391 26 123 1.26e-26 107
Msa0801540 AT5G24270.5 51.961 102 44 2 291 391 48 145 1.51e-26 107
Msa0801540 AT4G26570.2 59.036 83 34 0 295 377 93 175 1.71e-26 108
Msa0801540 AT5G24270.4 51.961 102 44 2 291 391 73 170 1.84e-26 108
Msa0801540 AT5G24270.1 51.961 102 44 2 291 391 73 170 1.84e-26 108
Msa0801540 AT5G24270.2 51.961 102 44 2 291 391 73 170 1.84e-26 108
Msa0801540 AT1G68320.1 53.684 95 43 1 391 484 40 134 2.70e-26 109
Msa0801540 AT2G26950.1 53.933 89 37 2 390 477 36 121 3.19e-26 111
Msa0801540 AT4G26570.1 56.180 89 38 1 290 377 83 171 6.46e-26 106
Msa0801540 AT1G48000.1 53.261 92 42 1 381 471 43 134 7.27e-26 107
Msa0801540 AT4G16350.2 48.246 114 56 2 265 377 54 165 1.62e-25 105
Msa0801540 AT4G16350.1 48.246 114 56 2 265 377 54 165 1.62e-25 105
Msa0801540 AT1G66380.1 58.333 84 34 1 390 472 28 111 2.02e-25 102
Msa0801540 AT3G27810.2 58.442 77 31 1 403 478 4 80 2.03e-25 103
Msa0801540 AT5G59780.3 54.545 88 39 1 390 476 28 115 3.45e-25 105
Msa0801540 AT5G40350.2 49.038 104 49 2 403 502 5 108 5.19e-25 102
Msa0801540 AT3G46130.1 53.409 88 40 1 390 476 29 116 9.48e-25 104
Msa0801540 AT5G14750.3 62.319 69 25 1 406 473 18 86 1.07e-24 101
Msa0801540 AT1G66370.1 54.762 84 37 1 390 472 28 111 1.53e-24 103
Msa0801540 AT5G55990.1 56.180 89 38 1 290 377 83 171 1.55e-24 102
Msa0801540 AT5G55990.2 56.180 89 38 1 290 377 83 171 1.55e-24 102
Msa0801540 AT4G33000.4 51.136 88 42 1 290 376 104 191 1.98e-24 101
Msa0801540 AT4G33000.6 51.136 88 42 1 290 376 104 191 1.98e-24 101
Msa0801540 AT4G33000.5 51.136 88 42 1 290 376 104 191 2.67e-24 101
Msa0801540 AT3G53200.1 57.831 83 34 1 391 472 30 112 3.56e-24 102
Msa0801540 AT2G47190.1 49.438 89 44 1 388 475 38 126 4.48e-24 102
Msa0801540 AT4G33000.2 50.562 89 43 1 290 377 104 192 8.39e-24 101
Msa0801540 AT4G33000.1 50.562 89 43 1 290 377 114 202 9.36e-24 101
Msa0801540 AT3G47600.2 60.811 74 28 1 403 475 39 112 1.05e-23 102
Msa0801540 AT1G56650.1 48.571 105 45 2 390 485 28 132 1.11e-23 100
Msa0801540 AT3G46130.3 57.895 76 31 1 402 476 9 84 1.33e-23 100
Msa0801540 AT3G46130.4 58.667 75 30 1 403 476 20 94 2.62e-23 99.8
Msa0801540 AT5G59780.2 58.667 75 30 1 403 476 20 94 2.71e-23 99.0
Msa0801540 AT3G53200.2 63.380 71 25 1 403 472 9 79 2.76e-23 98.6
Msa0801540 AT3G06490.1 54.000 100 42 2 381 479 33 129 4.27e-23 101
Msa0801540 AT1G71030.2 54.545 77 34 1 409 484 5 81 4.74e-23 97.1
Msa0801540 AT1G22640.3 56.757 74 31 1 416 488 1 74 5.28e-23 97.8
Msa0801540 AT1G25340.2 41.985 131 56 5 391 508 39 162 5.64e-23 99.8
Msa0801540 AT1G71030.1 52.381 84 38 2 402 484 13 95 5.94e-23 97.4
Msa0801540 AT1G25340.3 41.985 131 56 5 391 508 39 162 7.12e-23 100
Msa0801540 AT1G18960.1 46.939 98 47 3 393 489 32 125 1.13e-22 99.4
Msa0801540 AT1G66390.1 57.143 84 35 1 390 472 28 111 3.85e-22 96.7
Msa0801540 AT5G49620.1 52.000 100 44 2 381 479 40 136 1.13e-21 96.7
Msa0801540 AT3G60460.1 52.874 87 39 2 390 474 31 117 1.65e-21 95.9
Msa0801540 AT3G23250.2 42.742 124 58 4 416 538 1 112 2.87e-21 93.6
Msa0801540 AT1G66380.3 59.155 71 28 1 403 472 8 78 1.67e-20 87.4
Msa0801540 AT4G26560.1 46.988 83 44 0 295 377 77 159 2.98e-20 90.1
Msa0801540 AT4G01420.2 48.193 83 43 0 295 377 73 155 2.27e-19 87.0
Msa0801540 AT4G01420.1 48.193 83 43 0 295 377 73 155 4.01e-19 86.7
Msa0801540 AT1G64480.4 41.837 98 56 1 290 386 72 169 1.65e-18 84.7
Msa0801540 AT5G49620.2 45.614 114 44 3 381 479 40 150 1.91e-18 87.4
Msa0801540 AT1G64480.2 41.837 98 56 1 290 386 72 169 3.17e-18 84.3
Msa0801540 AT1G64480.3 41.837 98 56 1 290 386 72 169 3.17e-18 84.3
Msa0801540 AT1G64480.1 41.837 98 56 1 290 386 72 169 3.17e-18 84.3
Msa0801540 AT2G39880.1 61.765 68 25 1 406 472 83 150 2.72e-17 84.3
Msa0801540 AT2G25230.1 42.857 91 46 4 395 481 49 137 4.15e-17 81.6
Msa0801540 AT4G18770.1 43.182 88 48 2 390 476 235 321 4.23e-17 84.7
Msa0801540 AT3G09230.1 53.623 69 31 1 406 473 88 156 9.84e-17 83.2
Msa0801540 AT5G14750.4 55.932 59 25 1 416 473 1 59 2.72e-16 76.6
Msa0801540 AT5G14750.2 55.932 59 25 1 416 473 1 59 2.72e-16 76.6
Msa0801540 AT3G55730.1 38.525 122 54 3 406 507 89 209 5.24e-16 80.9
Msa0801540 AT3G27785.1 42.268 97 50 4 390 482 207 301 5.73e-16 81.3
Msa0801540 AT3G50060.1 48.810 84 41 2 390 472 24 106 8.14e-16 79.0
Msa0801540 AT5G02320.3 45.882 85 44 2 390 473 85 168 8.23e-16 80.9
Msa0801540 AT5G02320.1 45.882 85 44 2 390 473 145 228 9.21e-16 81.3
Msa0801540 AT5G02320.2 45.882 85 44 2 390 473 145 228 9.21e-16 81.3
Msa0801540 AT5G40360.1 43.529 85 45 3 391 474 177 259 1.01e-15 79.7
Msa0801540 AT5G58850.1 43.182 88 44 2 406 492 138 220 1.14e-15 80.1
Msa0801540 AT4G37260.1 46.067 89 46 2 390 477 31 118 1.69e-15 78.6
Msa0801540 AT1G17950.1 42.045 88 49 2 390 476 23 109 1.73e-15 77.0
Msa0801540 AT3G09370.1 46.429 84 43 2 390 472 148 230 1.80e-15 80.1
Msa0801540 AT3G09370.2 46.429 84 43 2 390 472 153 235 1.87e-15 80.1
Msa0801540 AT3G09370.3 46.429 84 43 2 390 472 161 243 2.07e-15 79.7
Msa0801540 AT1G69560.1 41.111 90 49 3 390 477 125 212 2.66e-15 78.2
Msa0801540 AT1G69560.2 41.111 90 49 3 390 477 141 228 2.96e-15 78.2
Msa0801540 AT5G67300.1 47.619 84 42 2 390 472 24 106 3.70e-15 77.0
Msa0801540 AT1G26780.1 41.111 90 49 3 388 475 114 201 5.93e-15 76.3
Msa0801540 AT5G61420.1 64.815 54 18 1 439 491 2 55 6.34e-15 76.3
Msa0801540 AT1G26780.2 41.111 90 49 3 388 475 114 201 8.68e-15 76.6
Msa0801540 AT1G66380.2 50.000 78 37 1 390 467 28 103 8.89e-15 71.2
Msa0801540 AT3G29020.1 35.780 109 68 2 388 495 81 188 1.23e-14 74.3
Msa0801540 AT5G11050.1 47.059 68 35 1 406 472 138 205 1.30e-14 77.0
Msa0801540 AT2G23290.1 39.252 107 50 3 367 472 21 113 1.55e-14 75.5
Msa0801540 AT5G40430.1 43.529 85 43 4 395 477 76 157 2.40e-14 73.9
Msa0801540 AT4G32730.5 42.353 85 47 2 390 473 105 188 2.47e-14 77.0
Msa0801540 AT4G32730.4 42.353 85 47 2 390 473 105 188 2.47e-14 77.0
Msa0801540 AT4G32730.3 42.353 85 47 2 390 473 105 188 2.47e-14 77.0
Msa0801540 AT4G32730.2 42.353 85 47 2 390 473 105 188 2.47e-14 77.0
Msa0801540 AT1G73410.1 46.591 88 43 3 390 475 24 109 2.49e-14 73.6
Msa0801540 AT3G29020.2 38.889 90 53 2 388 476 83 171 2.62e-14 74.7
Msa0801540 AT4G32730.1 42.353 85 47 2 390 473 105 188 2.93e-14 76.6
Msa0801540 AT1G73410.2 46.591 88 43 3 390 475 24 109 3.01e-14 72.4
Msa0801540 AT4G33450.1 41.379 87 49 2 390 475 37 122 4.09e-14 73.2
Msa0801540 AT5G11510.3 41.860 86 46 3 390 473 99 182 2.62e-13 73.9
Msa0801540 AT5G11510.1 41.860 86 46 3 390 473 99 182 2.62e-13 73.9
Msa0801540 AT5G11510.4 41.860 86 46 3 390 473 99 182 2.62e-13 73.9
Msa0801540 AT5G11510.2 41.176 85 48 2 390 473 99 182 3.15e-13 73.6
Msa0801540 AT5G11510.5 41.176 85 48 2 390 473 99 182 3.42e-13 73.2
Msa0801540 AT5G17800.1 43.836 73 40 1 404 475 124 196 7.92e-13 70.5
Msa0801540 AT1G74430.2 56.604 53 22 1 436 487 9 61 9.60e-13 68.2
Msa0801540 AT4G00540.2 40.426 94 54 2 383 475 117 209 1.30e-12 70.5
Msa0801540 AT4G00540.1 40.426 94 54 2 383 475 115 207 1.59e-12 70.5
Msa0801540 AT5G14340.2 39.506 81 43 3 446 524 10 86 2.58e-12 66.2
Msa0801540 AT2G37630.1 35.714 84 48 1 404 481 38 121 1.32e-11 67.0
Msa0801540 AT3G23090.2 38.889 108 52 2 532 625 104 211 1.94e-11 66.2
Msa0801540 AT3G23090.5 38.889 108 52 2 532 625 105 212 1.96e-11 66.2
Msa0801540 AT3G23090.3 38.889 108 52 2 532 625 140 247 2.03e-11 66.6
Msa0801540 AT3G23090.1 38.889 108 52 2 532 625 104 211 2.05e-11 66.2
Msa0801540 AT3G23090.4 38.889 108 52 2 532 625 140 247 2.25e-11 66.6
Msa0801540 AT5G15310.3 66.667 45 14 1 446 489 9 53 2.74e-11 64.7

Find 167 sgRNAs with CRISPR-Local

Find 680 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTGATTACTTTGAATT+TGG 0.131166 5_3:+15544449 Msa0801540:CDS
GTTAAAATGCTTCAAGAAAA+TGG 0.189462 5_3:-15551292 Msa0801550:CDS
GATTACTTTGAATTTGGATA+TGG 0.198668 5_3:+15544455 Msa0801540:CDS
CTCTATGATTTGCACATTAC+TGG 0.200071 5_3:+15547896 Msa0801540:CDS
ATTTCTTCCAACATATTATT+AGG 0.203969 5_3:+15551184 Msa0801540:three_prime_UTR
TTGATATTCTCAGAAGATTT+TGG 0.217136 5_3:+15545805 Msa0801540:CDS
GATTCATGTTCAGTTGCTTC+TGG 0.221500 5_3:+15549721 Msa0801540:CDS
GCCTCACTTCGCTTCCCTTT+GGG 0.233487 5_3:+15540512 Msa0801540:CDS
CTGGACAACAAATGGACTTT+TGG 0.236072 5_3:+15547184 Msa0801540:CDS
TGTAGGTACTTTGACAATTA+TGG 0.237604 5_3:+15545928 Msa0801540:intron
ATTTCCATTGCATATGCTTT+TGG 0.239502 5_3:-15549066 None:intergenic
TTAAAATGTTTCTTGTTATC+AGG 0.245894 5_3:-15549691 None:intergenic
TTGCTTCTGCTCCAAGCTTT+TGG 0.254437 5_3:+15549904 Msa0801540:CDS
ATTACCAACAAAGACAAATT+TGG 0.260024 5_3:+15540438 Msa0801540:CDS
ATTGCATGTCTTCACAAATA+AGG 0.262358 5_3:+15551603 Msa0801540:three_prime_UTR
ATCCTAAAGTTGCTGATTCT+TGG 0.280363 5_3:-15551153 Msa0801550:CDS
TTTCAAAAGGTTCAATTCAT+TGG 0.290203 5_3:-15548983 None:intergenic
TTGTCTTCTAGCGCTGCGTT+CGG 0.310991 5_3:-15547755 None:intergenic
TCTTCTACATCCAAACTAAC+AGG 0.324282 5_3:-15546015 None:intergenic
TGTCTTCTAGCGCTGCGTTC+GGG 0.324892 5_3:-15547754 None:intergenic
ACTTCTCCTCAACTGTTTGA+TGG 0.326642 5_3:-15550235 None:intergenic
GGCCTCACTTCGCTTCCCTT+TGG 0.327265 5_3:+15540511 Msa0801540:CDS
CATATAGTCCGAGACAGATA+TGG 0.332987 5_3:+15550342 Msa0801540:three_prime_UTR
TGGGTTATGACAGCTTTGTT+AGG 0.333171 5_3:-15551235 Msa0801550:CDS
TCACATGAAGACAATGAATT+TGG 0.339091 5_3:-15544480 None:intergenic
TCAAATTGCGGCGCAATTGC+CGG 0.345914 5_3:+15548798 Msa0801540:CDS
ATTTCATTGTCTGTCCTTCC+CGG 0.348044 5_3:-15548817 None:intergenic
ATGGACTGCTGTGCTGGAAT+TGG 0.352828 5_3:+15544392 Msa0801540:CDS
CCTTTCCTCAAGGAATATAA+TGG 0.356155 5_3:-15550708 Msa0801550:CDS
TGAAGTCTCCTTCAGTTTCA+AGG 0.359899 5_3:+15549656 Msa0801540:CDS
TCCTAAAGTTGCTGATTCTT+GGG 0.362623 5_3:-15551152 Msa0801550:CDS
AGTATGGCTTCATGTGGTTA+TGG 0.367564 5_3:-15551370 Msa0801550:CDS
AAGAACAGAATCCAAAGAAA+TGG 0.369003 5_3:+15551490 Msa0801540:three_prime_UTR
CTTCGCTTCCCTTTGGGCGA+TGG 0.372153 5_3:+15540518 Msa0801540:CDS
CGCTATTGTGTGGCGGGTTG+TGG 0.373486 5_3:+15540490 Msa0801540:CDS
ATTCTGAAGCGTGTAGAAAA+AGG 0.373678 5_3:+15544907 Msa0801540:CDS
GTCGCCAAATTTGTCTTTGT+TGG 0.376355 5_3:-15540442 None:intergenic
CAGACAATGAAATGAATCTA+TGG 0.377303 5_3:+15548827 Msa0801540:CDS
AAGAAGAGACTGAGGCAAAA+AGG 0.381753 5_3:+15548862 Msa0801540:CDS
TGGTAGTTCTTCACCCAAAC+GGG 0.381791 5_3:+15546771 Msa0801540:CDS
TGAAGTGCAATAGCCCCGTT+TGG 0.382272 5_3:-15546785 None:intergenic
TTGTCTGAGGTTGAGAATAA+TGG 0.383111 5_3:+15548910 Msa0801540:CDS
TTCATGCAGTACTAGGAAAT+AGG 0.390350 5_3:+15548613 Msa0801540:CDS
TCTCCGGTGAAGGTGATTCC+TGG 0.392441 5_3:+15547165 Msa0801540:CDS
TATAGGATCGATCACTATCT+TGG 0.396364 5_3:+15545691 Msa0801540:intron
ACCCAAGAATCAGCAACTTT+AGG 0.400367 5_3:+15551151 Msa0801540:three_prime_UTR
AATGGAAACCCCTGTTAGTT+TGG 0.405110 5_3:+15546005 Msa0801540:CDS
AAAAGCATATGCAATGGAAA+TGG 0.406668 5_3:+15549068 Msa0801540:CDS
GTTGAACTTCATGCAGTACT+AGG 0.413389 5_3:+15548606 Msa0801540:CDS
ATTACTTTGAATTTGGATAT+GGG 0.418300 5_3:+15544456 Msa0801540:CDS
ATTCATGTTCAGTTGCTTCT+GGG 0.418308 5_3:+15549722 Msa0801540:CDS
TTGAACTCTCTGATTTCAAA+AGG 0.423755 5_3:-15548996 None:intergenic
AACTGTTTGATGCTGATGAA+TGG 0.424478 5_3:-15551255 Msa0801550:CDS
AGCAACAATATTTATTCTGC+AGG 0.424774 5_3:-15548327 None:intergenic
CGATGGTGCAAGCGTGGATC+GGG 0.426473 5_3:+15540535 Msa0801540:CDS
GTGGTAAGAGCTGCAGGCTT+AGG 0.429634 5_3:+15548517 Msa0801540:CDS
CTGTTACTTGACAGGGATGT+TGG 0.431891 5_3:+15544865 Msa0801540:intron
TTCTTGTTATCAGGTTTCAA+TGG 0.432356 5_3:-15549682 None:intergenic
TGGAGCAGCTCAGTCAGACT+TGG 0.433717 5_3:+15547204 Msa0801540:CDS
GGTGATTCCTGGACAACAAA+TGG 0.436798 5_3:+15547176 Msa0801540:CDS
CTTTCTTCCCATATCTGTCT+CGG 0.437499 5_3:-15550350 None:intergenic
AGAAATGAAAAGGTCTCATA+TGG 0.448571 5_3:+15546042 Msa0801540:CDS
ATTAATTTACCTGCTTGCTT+AGG 0.450338 5_3:-15548389 None:intergenic
CAAAAGTCCATTTGTTGTCC+AGG 0.451785 5_3:-15547183 None:intergenic
CAAATTGCGGCGCAATTGCC+GGG 0.453452 5_3:+15548799 Msa0801540:CDS
CGCTTGCACCATCGCCCAAA+GGG 0.458368 5_3:-15540526 None:intergenic
TCTATTTGATGTCAAGAGAA+AGG 0.462460 5_3:+15547685 Msa0801540:CDS
GGGTTATGACAGCTTTGTTA+GGG 0.463256 5_3:-15551234 Msa0801550:CDS
GAGGCTCGCTATTGTGTGGC+GGG 0.463438 5_3:+15540484 Msa0801540:CDS
GCATCTCAACCTGCCTTCTC+CGG 0.470321 5_3:+15547149 Msa0801540:CDS
CGAGTTTGAAATGAAGTTGG+CGG 0.472685 5_3:+15548179 Msa0801540:CDS
AGAACAGAATCCAAAGAAAT+GGG 0.473481 5_3:+15551491 Msa0801540:three_prime_UTR
TGGGAAGAAAGAATGATTGT+AGG 0.476056 5_3:+15550362 Msa0801540:three_prime_UTR
TCATTGGATAATAATATCTC+TGG 0.476615 5_3:-15548967 None:intergenic
GCGATGGTGCAAGCGTGGAT+CGG 0.476740 5_3:+15540534 Msa0801540:CDS
TTTCGAGTTTGAAATGAAGT+TGG 0.477365 5_3:+15548176 Msa0801540:CDS
GCTTCATGTGGTTATGGAGT+TGG 0.481868 5_3:-15551364 Msa0801550:CDS
AGGGGTTTCCATTGCAAAGA+GGG 0.484242 5_3:-15545995 None:intergenic
AAAAGGGAACGTGTGATTCA+AGG 0.489998 5_3:+15551525 Msa0801540:three_prime_UTR
TAATATACATCAGCATTGAA+TGG 0.490605 5_3:+15550594 Msa0801540:three_prime_UTR
CGACGTTGTTTGGAGGAAGT+TGG 0.492551 5_3:+15551314 Msa0801540:three_prime_UTR
AACTTGATGTTTAATCCACC+AGG 0.497562 5_3:+15551100 Msa0801540:intron
ATGGTAGTTCTTCACCCAAA+CGG 0.503508 5_3:+15546770 Msa0801540:CDS
AGAAGACATTAGAAATGAAA+AGG 0.504615 5_3:+15546032 Msa0801540:CDS
AGGAAGTTGGTGAGTGGCCA+TGG 0.507094 5_3:+15551327 Msa0801540:three_prime_UTR
CGTTCAGCTGACCAAAAGCT+TGG 0.507220 5_3:-15549915 None:intergenic
CAACGTATGGTCATGGATGT+TGG 0.507786 5_3:+15548357 Msa0801540:CDS
GGAATCACCTTCACCGGAGA+AGG 0.508144 5_3:-15547162 None:intergenic
TTATGCTCTAGATTTGAGTC+TGG 0.508618 5_3:+15550567 Msa0801540:three_prime_UTR
GAAGTGCAATAGCCCCGTTT+GGG 0.509640 5_3:-15546784 None:intergenic
GACAATGGTTTATGAGTCAC+AGG 0.514909 5_3:-15548892 None:intergenic
TTATTCTCAACCTCAGACAA+TGG 0.517875 5_3:-15548907 None:intergenic
AAAGATGTGGTAAGAGCTGC+AGG 0.517924 5_3:+15548511 Msa0801540:CDS
ATATAGTCCGAGACAGATAT+GGG 0.518624 5_3:+15550343 Msa0801540:three_prime_UTR
CAACCTGCCTTCTCCGGTGA+AGG 0.519909 5_3:+15547155 Msa0801540:CDS
AATACTAGCCCTCTTTGCAA+TGG 0.520791 5_3:+15545987 Msa0801540:CDS
AATGGTTTCCTTGAAACTGA+AGG 0.520980 5_3:-15549664 None:intergenic
ACTGTTTGATGCTGATGAAT+GGG 0.521377 5_3:-15551254 Msa0801550:CDS
GTAAGAGCTGCAGGCTTAGG+TGG 0.521603 5_3:+15548520 Msa0801540:CDS
TTGCGGCGCAATTGCCGGGA+AGG 0.523236 5_3:+15548803 Msa0801540:CDS
GGCCCCTCATGGTAAAAGCT+TGG 0.526227 5_3:-15550282 None:intergenic
TCTCTCAACAATGCAGGACT+TGG 0.528802 5_3:-15550639 Msa0801550:CDS
CTATCTTGGAAAAGAGCTTG+TGG 0.529498 5_3:+15545705 Msa0801540:CDS
CTATTTGATGTCAAGAGAAA+GGG 0.531783 5_3:+15547686 Msa0801540:CDS
ATGCAGTAATTGATATTACA+AGG 0.532867 5_3:+15546747 Msa0801540:intron
TTTGTTAGGGACTGATATTG+AGG 0.534874 5_3:-15551221 Msa0801550:CDS
TGTCCAGGAATCACCTTCAC+CGG 0.535346 5_3:-15547168 None:intergenic
AGCAATTCCTAATAATATGT+TGG 0.536423 5_3:-15551191 Msa0801550:CDS
GTTTGTATATTCTTAAGAGC+TGG 0.539478 5_3:+15550663 Msa0801540:three_prime_UTR
TTCTTAAGTATGGCTTCATG+TGG 0.542109 5_3:-15551376 Msa0801550:CDS
CCATTATATTCCTTGAGGAA+AGG 0.542881 5_3:+15550708 Msa0801540:three_prime_UTR
TTGGTACTGAAGGACGTGGC+AGG 0.552068 5_3:+15545824 Msa0801540:CDS
CTTCTAGCGCTGCGTTCGGG+TGG 0.558200 5_3:-15547751 None:intergenic
TCCACCAGGGTACAAGTAGC+TGG 0.558594 5_3:+15551114 Msa0801540:three_prime_UTR
GGAGCAGCTCAGTCAGACTT+GGG 0.558663 5_3:+15547205 Msa0801540:CDS
CTGTGTGAAAATATGAACTT+AGG 0.558838 5_3:-15550309 None:intergenic
TTTGGGCGATGGTGCAAGCG+TGG 0.561538 5_3:+15540529 Msa0801540:CDS
TTATGGAGTTGGAGTCAAGT+GGG 0.563532 5_3:-15551353 Msa0801550:CDS
GTCACCAGCTACTTGTACCC+TGG 0.565315 5_3:-15551118 Msa0801550:CDS
TATTGCAGATACATTGCACT+TGG 0.566057 5_3:-15550738 Msa0801550:intron
AACAATATTTATTCTGCAGG+TGG 0.566902 5_3:-15548324 None:intergenic
TGAACGTGCACAAAGAAGAA+AGG 0.570373 5_3:+15549932 Msa0801540:CDS
TTCTATTCAAAATCAAGCAA+TGG 0.570585 5_3:+15550042 Msa0801540:CDS
TCCAGAGGCTCGCTATTGTG+TGG 0.571877 5_3:+15540480 Msa0801540:CDS
TCACCTTCACCGGAGAAGGC+AGG 0.572868 5_3:-15547158 None:intergenic
TTCACCAAAAGCATATGCAA+TGG 0.574736 5_3:+15549062 Msa0801540:CDS
AGAGGCTCGCTATTGTGTGG+CGG 0.574778 5_3:+15540483 Msa0801540:CDS
CTTCTACATCCAAACTAACA+GGG 0.575562 5_3:-15546014 None:intergenic
CAAACATCTCTCAACAATGC+AGG 0.576418 5_3:-15550645 Msa0801550:CDS
TGGCAATGAACCTTTCCTCA+AGG 0.576590 5_3:-15550718 Msa0801550:CDS
TATCAGATGGTCTCAAATTG+CGG 0.579070 5_3:+15548786 Msa0801540:intron
TTATCAGGTTTGCAAAGATG+TGG 0.585835 5_3:+15548498 Msa0801540:intron
GAAAATATGAACTTAGGTGG+AGG 0.586726 5_3:-15550303 None:intergenic
GCCCAAAGGGAAGCGAAGTG+AGG 0.587619 5_3:-15540513 None:intergenic
GTTATGGAGTTGGAGTCAAG+TGG 0.589186 5_3:-15551354 Msa0801550:CDS
TGGAGTCAAGTGGGGAACCA+TGG 0.589713 5_3:-15551344 Msa0801550:CDS
AGTAATTGATATTACAAGGA+TGG 0.590314 5_3:+15546751 Msa0801540:intron
ATGTTCCATTATATTCCTTG+AGG 0.590467 5_3:+15550703 Msa0801540:three_prime_UTR
ACGCTTGCACCATCGCCCAA+AGG 0.595911 5_3:-15540527 None:intergenic
ACCAGCTACTTGTACCCTGG+TGG 0.596849 5_3:-15551115 Msa0801550:CDS
ACTTAGGTGGAGGCCCCTCA+TGG 0.602914 5_3:-15550293 None:intergenic
GCATATGCAATGGAAATGGA+AGG 0.607612 5_3:+15549072 Msa0801540:CDS
AAGAAGCCATCAAACAGTTG+AGG 0.607756 5_3:+15550229 Msa0801540:three_prime_UTR
AAGAGGAACATTCTCACAAG+AGG 0.608650 5_3:+15548569 Msa0801540:CDS
CAGGGGTTTCCATTGCAAAG+AGG 0.613005 5_3:-15545996 None:intergenic
GATAGAACAACGTATGGTCA+TGG 0.614248 5_3:+15548350 Msa0801540:CDS
GTTGCTGATAGAACAACGTA+TGG 0.625794 5_3:+15548344 Msa0801540:CDS
AGTTCAGTACCTAAGCAAGC+AGG 0.631698 5_3:+15548380 Msa0801540:CDS
TGTGAAAATATGAACTTAGG+TGG 0.631869 5_3:-15550306 None:intergenic
GTTTGGAGGAAGTTGGTGAG+TGG 0.635572 5_3:+15551321 Msa0801540:three_prime_UTR
TATGTTGGAAGAAATAAGCA+AGG 0.636385 5_3:-15551176 Msa0801550:CDS
TTCTACATCCAAACTAACAG+GGG 0.638226 5_3:-15546013 None:intergenic
TGAAGGAGACTTCAACTGCA+AGG 0.644382 5_3:-15549647 None:intergenic
TGAGGTTGAGAATAATGGAG+AGG 0.653412 5_3:+15548915 Msa0801540:CDS
ATGTATTTCCTCGACCACAA+AGG 0.661861 5_3:-15545769 None:intergenic
ACTTGATGTTTAATCCACCA+GGG 0.662823 5_3:+15551101 Msa0801540:intron
TCACGACATCATTTCTCCAG+AGG 0.663883 5_3:+15540465 Msa0801540:CDS
ATCAGCATTGAATGGAACTG+TGG 0.669599 5_3:+15550602 Msa0801540:three_prime_UTR
GACTCATAAACCATTGTCTG+AGG 0.676132 5_3:+15548897 Msa0801540:CDS
TATGGAGTTGGAGTCAAGTG+GGG 0.676243 5_3:-15551352 Msa0801550:CDS
CATGTTTGAAGAAGAGACTG+AGG 0.677238 5_3:+15548854 Msa0801540:CDS
GATAGAAACAATTCTAGACA+AGG 0.686128 5_3:+15548209 Msa0801540:CDS
TGGCTTTATAGAGCGTCCAG+AGG 0.686251 5_3:+15547916 Msa0801540:CDS
GGTAGTTCTTCACCCAAACG+GGG 0.694425 5_3:+15546772 Msa0801540:CDS
ACGTGCACAAAGAAGAAAGG+AGG 0.694653 5_3:+15549935 Msa0801540:CDS
AAGGTACATAAAATAAAACA+AGG 0.694965 5_3:+15551622 Msa0801540:three_prime_UTR
ATTCAAGCAGTATCTGACTG+AGG 0.704574 5_3:+15545308 Msa0801540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTATTAAATTTTTT+AGG + chr5_3:15542576-15542595 Msa0801540:intron 0.0%
!!! AAATATTATTAAATTTTTTA+GGG + chr5_3:15542577-15542596 Msa0801540:intron 0.0%
!! TTGTTAAAAAAAAATATTGA+TGG + chr5_3:15540962-15540981 Msa0801540:intron 10.0%
!! TGTTAAAAAAAAATATTGAT+GGG + chr5_3:15540963-15540982 Msa0801540:intron 10.0%
!! ATAAAAATAGGAATTATAAT+AGG - chr5_3:15541245-15541264 None:intergenic 10.0%
!!! TATTATAATTCCTATTTTTA+TGG + chr5_3:15541244-15541263 Msa0801540:intron 10.0%
!!! GATATGATTTTATTAATATT+AGG + chr5_3:15541542-15541561 Msa0801540:intron 10.0%
!! ATTTGATATCAAATTTAATT+TGG + chr5_3:15541800-15541819 Msa0801540:intron 10.0%
!!! TATTTTATAATGTTTATTCA+CGG + chr5_3:15542726-15542745 Msa0801540:intron 10.0%
!! TAAAATGGAAAATATTATAT+AGG + chr5_3:15545674-15545693 Msa0801540:intron 10.0%
!! AAAGTTATTAACAAATATAA+TGG - chr5_3:15546435-15546454 None:intergenic 10.0%
!!! CTTAGATAATTTAATTTAAA+AGG + chr5_3:15547409-15547428 Msa0801540:intron 10.0%
!! ATTATATTATTATATGCTAA+TGG - chr5_3:15548430-15548449 None:intergenic 10.0%
!!! AATTTTTGTTTAATATTATC+AGG + chr5_3:15548483-15548502 Msa0801540:intron 10.0%
!!! ATGAACATAATTTTTTAAAA+CGG - chr5_3:15548758-15548777 None:intergenic 10.0%
!!! AAATTTAATATTTTTCTAAC+TGG + chr5_3:15549210-15549229 Msa0801540:intron 10.0%
!! ATGTGTAATAAATAAATTGA+TGG - chr5_3:15540599-15540618 None:intergenic 15.0%
!! GTCAAATATATATTAATAAG+TGG + chr5_3:15541010-15541029 Msa0801540:intron 15.0%
!! GTATCATAATATTACATTTA+GGG - chr5_3:15541396-15541415 None:intergenic 15.0%
!!! TTTTTTCTTCTAATTAACAA+AGG - chr5_3:15541486-15541505 None:intergenic 15.0%
!! TGTTAATTAGAAGAAAAAAT+CGG + chr5_3:15541487-15541506 Msa0801540:intron 15.0%
!!! ATTATTTTTGTCACAAAATT+AGG + chr5_3:15541575-15541594 Msa0801540:intron 15.0%
!!! TAACTTATAGTATTTTTTAC+AGG - chr5_3:15541843-15541862 None:intergenic 15.0%
!! AAAAACATATAATCTAACAT+GGG - chr5_3:15542530-15542549 None:intergenic 15.0%
!! AAAAAACATATAATCTAACA+TGG - chr5_3:15542531-15542550 None:intergenic 15.0%
!! AAGAAAAAAAAACAGAAAAA+AGG + chr5_3:15543051-15543070 Msa0801540:intron 15.0%
!! AGAAAAAAAAACAGAAAAAA+GGG + chr5_3:15543052-15543071 Msa0801540:intron 15.0%
!! AAGTAACTAAAGAAAAATTA+GGG + chr5_3:15543813-15543832 Msa0801540:intron 15.0%
!! TAATCTAAATCAACTAATTT+AGG + chr5_3:15543959-15543978 Msa0801540:intron 15.0%
!! AATCTAAATCAACTAATTTA+GGG + chr5_3:15543960-15543979 Msa0801540:intron 15.0%
!! ATTCTTATTGTATATGAAAA+AGG + chr5_3:15544177-15544196 Msa0801540:intron 15.0%
!!! ATTGATTTTGAATTTTTAGA+CGG + chr5_3:15544275-15544294 Msa0801540:intron 15.0%
!! AATAAAAAAAAAAAGCAACA+GGG - chr5_3:15544830-15544849 None:intergenic 15.0%
!! AAATAAAAAAAAAAAGCAAC+AGG - chr5_3:15544831-15544850 None:intergenic 15.0%
!!! TGGTTATATACTTTTTTTAT+AGG + chr5_3:15546062-15546081 Msa0801540:intron 15.0%
!!! ATTTAAAACAGATGAATTAA+AGG - chr5_3:15546307-15546326 None:intergenic 15.0%
!! AATAAAATCATAAAATTCAG+TGG - chr5_3:15547997-15548016 None:intergenic 15.0%
!! ATTTCATATCTAATATTCTA+TGG - chr5_3:15548298-15548317 None:intergenic 15.0%
!!! TTAATTAGTTTTGTTTCAAT+AGG + chr5_3:15549971-15549990 Msa0801540:intron 15.0%
!!! TAATTAGTTTTGTTTCAATA+GGG + chr5_3:15549972-15549991 Msa0801540:intron 15.0%
!! TAGAATTAATTATAAAGTAG+AGG - chr5_3:15550433-15550452 None:intergenic 15.0%
!! CTAAATCAAATAATAAGTTT+AGG - chr5_3:15550545-15550564 Msa0801550:CDS 15.0%
!!! CTAAACTTATTATTTGATTT+AGG + chr5_3:15550543-15550562 Msa0801540:intron 15.0%
!! CAATTTATTTATTACACATG+TGG + chr5_3:15540600-15540619 Msa0801540:intron 20.0%
!!! AAACAACCTATTATTTCTTT+CGG - chr5_3:15540688-15540707 None:intergenic 20.0%
!! TAATAGGTTGTTTAAAAATC+AGG + chr5_3:15540695-15540714 Msa0801540:intron 20.0%
!! AAGTTAACTATTATTCTTTG+TGG + chr5_3:15540745-15540764 Msa0801540:intron 20.0%
!!! TGTATTTTTAGTAGTGTTTT+TGG + chr5_3:15540882-15540901 Msa0801540:intron 20.0%
!!! AGTTTACTAAATTTTATTCC+CGG + chr5_3:15541126-15541145 Msa0801540:intron 20.0%
!!! AAAAATTTTCCCAAAGAAAA+GGG + chr5_3:15541172-15541191 Msa0801540:intron 20.0%
!! CTTAACATTATAATATTCCT+GGG - chr5_3:15541272-15541291 None:intergenic 20.0%
!!! CATCTTTTTTTCTAAATACT+TGG + chr5_3:15541296-15541315 Msa0801540:intron 20.0%
!! ATTATTCCTAGGAATAAATT+TGG + chr5_3:15541351-15541370 Msa0801540:intron 20.0%
!! CGTATCATAATATTACATTT+AGG - chr5_3:15541397-15541416 None:intergenic 20.0%
!!! GATACGATTTTATTGATATT+AGG + chr5_3:15541411-15541430 Msa0801540:intron 20.0%
!!! TATTTTCCTAAAAAAATGCT+TGG - chr5_3:15541449-15541468 None:intergenic 20.0%
!!! GTATTTTTTACAGGATAATT+TGG - chr5_3:15541834-15541853 None:intergenic 20.0%
!! TAAAGAATTATGGAGTATAT+TGG + chr5_3:15542094-15542113 Msa0801540:intron 20.0%
!! ACTTCTCAATTATTAAGAAT+GGG - chr5_3:15542290-15542309 None:intergenic 20.0%
!! AACTTCTCAATTATTAAGAA+TGG - chr5_3:15542291-15542310 None:intergenic 20.0%
!! ATAAGTAAAACGTGATATAT+TGG - chr5_3:15542488-15542507 None:intergenic 20.0%
!! AGTGAATTAATGTAATTGTT+AGG + chr5_3:15542602-15542621 Msa0801540:intron 20.0%
!! TCTCTTTACACATATATATA+GGG - chr5_3:15543031-15543050 None:intergenic 20.0%
!! TTCTCTTTACACATATATAT+AGG - chr5_3:15543032-15543051 None:intergenic 20.0%
!! AATGAAAAACAAAAGAAGAA+GGG - chr5_3:15543217-15543236 None:intergenic 20.0%
!! AAATGAAAAACAAAAGAAGA+AGG - chr5_3:15543218-15543237 None:intergenic 20.0%
!!! GTTTTTGTTTTTGTTGTTTT+TGG + chr5_3:15543426-15543445 Msa0801540:intron 20.0%
!!! TTTAGAGTTAGATTTTCATT+TGG + chr5_3:15543484-15543503 Msa0801540:intron 20.0%
!!! TTAGAGTTAGATTTTCATTT+GGG + chr5_3:15543485-15543504 Msa0801540:intron 20.0%
!!! TAATCATGAATTCATGTTTT+GGG - chr5_3:15543571-15543590 None:intergenic 20.0%
!!! ATAATCATGAATTCATGTTT+TGG - chr5_3:15543572-15543591 None:intergenic 20.0%
!! GAAGTAACTAAAGAAAAATT+AGG + chr5_3:15543812-15543831 Msa0801540:intron 20.0%
!! AGTAACTAAAGAAAAATTAG+GGG + chr5_3:15543814-15543833 Msa0801540:intron 20.0%
!! ATCTAAATCAACTAATTTAG+GGG + chr5_3:15543961-15543980 Msa0801540:intron 20.0%
!!! TTGATTTTGAATTTTTAGAC+GGG + chr5_3:15544276-15544295 Msa0801540:intron 20.0%
!! GAAATTGATTACTTTGAATT+TGG + chr5_3:15544449-15544468 Msa0801540:CDS 20.0%
!! ATTACTTTGAATTTGGATAT+GGG + chr5_3:15544456-15544475 Msa0801540:CDS 20.0%
!!! ATCTAAGATTTGATATGTTA+TGG + chr5_3:15544746-15544765 Msa0801540:intron 20.0%
!!! AATGATTTTCTTGATTACTA+AGG + chr5_3:15544970-15544989 Msa0801540:intron 20.0%
!! TTATTTGGTATGATGATTAA+AGG + chr5_3:15545149-15545168 Msa0801540:intron 20.0%
!!! TCTATTTTCATAAGCTATAT+TGG + chr5_3:15545482-15545501 Msa0801540:intron 20.0%
!!! GTAAAGTGCTTTATTTAAAA+TGG + chr5_3:15545659-15545678 Msa0801540:intron 20.0%
!! CAAAAATTAGATTTGAGAAT+CGG - chr5_3:15545747-15545766 None:intergenic 20.0%
!!! CACTTTTTATGATCTTAAAA+TGG + chr5_3:15545873-15545892 Msa0801540:intron 20.0%
!!! TTTCTACTTATATTTAAGGT+CGG - chr5_3:15546118-15546137 None:intergenic 20.0%
!! AACCTTTCTACTTATATTTA+AGG - chr5_3:15546122-15546141 None:intergenic 20.0%
!! ATAAAACAAATTTGATCCAA+TGG - chr5_3:15546650-15546669 None:intergenic 20.0%
!! CTGAAAAGGATAAAAAAATT+AGG - chr5_3:15547331-15547350 None:intergenic 20.0%
!!! AAAAAGTTATTTCACAAGAA+TGG - chr5_3:15547608-15547627 None:intergenic 20.0%
!!! AAATAACTTTTTCAATTGAC+TGG + chr5_3:15547616-15547635 Msa0801540:intron 20.0%
!! ATAATCTTTCACTTATATCT+TGG - chr5_3:15549295-15549314 None:intergenic 20.0%
!!! TTTTATGAAATGGACTATAT+AGG - chr5_3:15549331-15549350 None:intergenic 20.0%
!! CAAAATCAATTATCTTACAT+AGG - chr5_3:15549414-15549433 None:intergenic 20.0%
!!! CTATGTAAGATAATTGATTT+TGG + chr5_3:15549412-15549431 Msa0801540:intron 20.0%
!!! TTAAAATGTTTCTTGTTATC+AGG - chr5_3:15549694-15549713 None:intergenic 20.0%
!! TTATAAACCTTATAGTCAAA+GGG + chr5_3:15549753-15549772 Msa0801540:intron 20.0%
!! AAAATATCATTGCTAGAATA+AGG - chr5_3:15549803-15549822 None:intergenic 20.0%
!! ATTTCTTCCAACATATTATT+AGG + chr5_3:15551184-15551203 Msa0801540:three_prime_UTR 20.0%
!!! CATTATTTTCTTCTTAAGTA+TGG - chr5_3:15551389-15551408 Msa0801550:CDS 20.0%
!! AAACTCAGAAGAAAAAAAAT+TGG - chr5_3:15551458-15551477 None:intergenic 20.0%
!! AAGGTACATAAAATAAAACA+AGG + chr5_3:15551622-15551641 Msa0801540:three_prime_UTR 20.0%
! ATTACCAACAAAGACAAATT+TGG + chr5_3:15540438-15540457 Msa0801540:CDS 25.0%
! TTAACTATTATTCTTTGTGG+TGG + chr5_3:15540748-15540767 Msa0801540:intron 25.0%
! TTGATGGGAGATAATTTATT+TGG + chr5_3:15540978-15540997 Msa0801540:intron 25.0%
! AGTAAACTTGTAACAAACAT+AGG - chr5_3:15541114-15541133 None:intergenic 25.0%
!! GTTTACTAAATTTTATTCCC+GGG + chr5_3:15541127-15541146 Msa0801540:intron 25.0%
!! GAAAAATTTTCCCAAAGAAA+AGG + chr5_3:15541171-15541190 Msa0801540:intron 25.0%
! GCTTAACATTATAATATTCC+TGG - chr5_3:15541273-15541292 None:intergenic 25.0%
! AGTTTACCAAATTTATTCCT+AGG - chr5_3:15541360-15541379 None:intergenic 25.0%
!!! AATGAACCAAGCATTTTTTT+AGG + chr5_3:15541440-15541459 Msa0801540:intron 25.0%
! AATTAGAAGAAAAAATCGGA+AGG + chr5_3:15541491-15541510 Msa0801540:intron 25.0%
!!! AATAAACCACACATTTTTTG+TGG + chr5_3:15541604-15541623 Msa0801540:intron 25.0%
! AGATAAATGTGTAACTGAAA+CGG + chr5_3:15541627-15541646 Msa0801540:intron 25.0%
!! TTTTTGCCTTTTTTTCTGTT+GGG - chr5_3:15541676-15541695 None:intergenic 25.0%
!! ATTTTTGCCTTTTTTTCTGT+TGG - chr5_3:15541677-15541696 None:intergenic 25.0%
! AACAGAAAAAAAGGCAAAAA+TGG + chr5_3:15541676-15541695 Msa0801540:intron 25.0%
!!! CAAAAATGGATTGTAGTATT+AGG + chr5_3:15541690-15541709 Msa0801540:intron 25.0%
! GATATCAAATTAATTACACG+CGG - chr5_3:15541790-15541809 None:intergenic 25.0%
!! TTTTCCAAATCATACATGTT+TGG + chr5_3:15542148-15542167 Msa0801540:intron 25.0%
! TTAACCAAACATGTATGATT+TGG - chr5_3:15542155-15542174 None:intergenic 25.0%
! TTATTGATGGAATACATGTT+TGG + chr5_3:15542214-15542233 Msa0801540:intron 25.0%
! AATACATGTTTGGTTAATGA+AGG + chr5_3:15542224-15542243 Msa0801540:intron 25.0%
! TTCTCAATTATTAAGAATGG+GGG - chr5_3:15542288-15542307 None:intergenic 25.0%
! CTTCTCAATTATTAAGAATG+GGG - chr5_3:15542289-15542308 None:intergenic 25.0%
!!! TTTTCCTCTTTTAATTACAC+CGG + chr5_3:15542445-15542464 Msa0801540:intron 25.0%
! GGAAACTTATAATGTATTTC+CGG - chr5_3:15542467-15542486 None:intergenic 25.0%
! GAAAATCATGTATACTCTAT+TGG + chr5_3:15542661-15542680 Msa0801540:intron 25.0%
!! TACAAATTTTCAGATGTCAT+GGG + chr5_3:15542789-15542808 Msa0801540:intron 25.0%
! TATTGTCTACTAAACTAGTT+AGG + chr5_3:15542929-15542948 Msa0801540:intron 25.0%
! AATAAGGGTAAAATGGTAAT+TGG - chr5_3:15542971-15542990 None:intergenic 25.0%
!! AATTACCATTTTACCCTTAT+TGG + chr5_3:15542970-15542989 Msa0801540:intron 25.0%
!! ATTACCATTTTACCCTTATT+GGG + chr5_3:15542971-15542990 Msa0801540:intron 25.0%
! TCTTCATCAAAGTTAATTTC+TGG + chr5_3:15543247-15543266 Msa0801540:intron 25.0%
! CTTCATCAAAGTTAATTTCT+GGG + chr5_3:15543248-15543267 Msa0801540:intron 25.0%
! TTCATCAAAGTTAATTTCTG+GGG + chr5_3:15543249-15543268 Msa0801540:intron 25.0%
!!! TTGTTTTAGCTTTTGTGTTT+TGG + chr5_3:15543356-15543375 Msa0801540:intron 25.0%
!!! TTTGTTGTTGATTCTGTTTT+TGG + chr5_3:15543394-15543413 Msa0801540:intron 25.0%
!! TAGAGTTAGATTTTCATTTG+GGG + chr5_3:15543486-15543505 Msa0801540:intron 25.0%
!!! TGCTTCTTTTTTCATTGTAT+AGG + chr5_3:15543591-15543610 Msa0801540:intron 25.0%
! TTCATCAATGTAATATTCTC+TGG + chr5_3:15543628-15543647 Msa0801540:intron 25.0%
! GTTTGATTGAAAATTTGTGA+AGG + chr5_3:15543687-15543706 Msa0801540:intron 25.0%
! TTGATTTAGATTATGCATGA+GGG - chr5_3:15543952-15543971 None:intergenic 25.0%
! ATTCAATCAAATTATTCCAG+TGG - chr5_3:15544139-15544158 None:intergenic 25.0%
! ACTGGAATAATTTGATTGAA+TGG + chr5_3:15544138-15544157 Msa0801540:intron 25.0%
! CTGGAATAATTTGATTGAAT+GGG + chr5_3:15544139-15544158 Msa0801540:intron 25.0%
!!! ATTTGATTGAATGGGTTTTA+TGG + chr5_3:15544147-15544166 Msa0801540:intron 25.0%
! CATATGAATGATTCAATCAT+AGG + chr5_3:15544365-15544384 Msa0801540:intron 25.0%
!! TGATTCAATCATAGGTTTTA+TGG + chr5_3:15544373-15544392 Msa0801540:intron 25.0%
! GATTACTTTGAATTTGGATA+TGG + chr5_3:15544455-15544474 Msa0801540:CDS 25.0%
! CTTCAATTTATATGTCTTTG+TGG + chr5_3:15544542-15544561 Msa0801540:intron 25.0%
! ATTGAGTGAATTATATGTTC+AGG + chr5_3:15544627-15544646 Msa0801540:intron 25.0%
!! AACCTTTTTATTCACTATGT+TGG - chr5_3:15544715-15544734 None:intergenic 25.0%
!! TCAAGAAAATCATTCTTTTG+AGG - chr5_3:15544964-15544983 None:intergenic 25.0%
!!! TTTGTTTTGTTGTTTGATTG+TGG + chr5_3:15545034-15545053 Msa0801540:intron 25.0%
! ATGATTAAAGGAAACTGATA+AGG + chr5_3:15545161-15545180 Msa0801540:intron 25.0%
!! ATCTAATTTTTGAACCTTTG+TGG + chr5_3:15545755-15545774 Msa0801540:CDS 25.0%
!! TTGATATTCTCAGAAGATTT+TGG + chr5_3:15545805-15545824 Msa0801540:CDS 25.0%
! AGAAGACATTAGAAATGAAA+AGG + chr5_3:15546032-15546051 Msa0801540:CDS 25.0%
! GACCTTAAATATAAGTAGAA+AGG + chr5_3:15546117-15546136 Msa0801540:intron 25.0%
!! ACAAATACATGTACCTTTTT+CGG + chr5_3:15546154-15546173 Msa0801540:intron 25.0%
!!! ACCTTTTTCGGTTAAATATA+AGG + chr5_3:15546166-15546185 Msa0801540:intron 25.0%
! ACCTTATATTTAACCGAAAA+AGG - chr5_3:15546170-15546189 None:intergenic 25.0%
!! TTTTCGGTTAAATATAAGGT+CGG + chr5_3:15546170-15546189 Msa0801540:intron 25.0%
! ACTTTCTTCTCAAAATCATT+TGG + chr5_3:15546230-15546249 Msa0801540:intron 25.0%
! CTTTCTTCTCAAAATCATTT+GGG + chr5_3:15546231-15546250 Msa0801540:intron 25.0%
!! TGTTTGGATTGATTTATTTG+AGG + chr5_3:15546515-15546534 Msa0801540:intron 25.0%
! TAAACATTTGTGAGACTATT+TGG + chr5_3:15546551-15546570 Msa0801540:intron 25.0%
! AAACATTTGTGAGACTATTT+GGG + chr5_3:15546552-15546571 Msa0801540:intron 25.0%
! ATGCAGTAATTGATATTACA+AGG + chr5_3:15546747-15546766 Msa0801540:intron 25.0%
! AGTAATTGATATTACAAGGA+TGG + chr5_3:15546751-15546770 Msa0801540:intron 25.0%
!! AAGCATTTTGAATCTGAAAA+AGG + chr5_3:15546809-15546828 Msa0801540:CDS 25.0%
! ACAATTAGGAATGATAGTAT+TGG + chr5_3:15547072-15547091 Msa0801540:intron 25.0%
! GGCTTCTTCAAAAAAAAAAA+AGG + chr5_3:15547093-15547112 Msa0801540:intron 25.0%
! TTCTTTATAAGACCTTCATT+AGG - chr5_3:15547367-15547386 None:intergenic 25.0%
!! AATGAAGGTCTTATAAAGAA+TGG + chr5_3:15547367-15547386 Msa0801540:intron 25.0%
! ATATCACTGATATGAATGAA+AGG - chr5_3:15547518-15547537 None:intergenic 25.0%
! TTAAGGTAAACAACAATAAG+TGG - chr5_3:15547810-15547829 None:intergenic 25.0%
! TGTCCTGATATATTATGTTT+GGG + chr5_3:15547850-15547869 Msa0801540:intron 25.0%
! AATCCCAAACATAATATATC+AGG - chr5_3:15547856-15547875 None:intergenic 25.0%
!! CAGAAAAAAAGTTTTCACTT+GGG - chr5_3:15548020-15548039 None:intergenic 25.0%
! AAAATGATATCAATGAGAAG+AGG - chr5_3:15548085-15548104 None:intergenic 25.0%
! TATGCTAATGGAGATAAAAT+TGG - chr5_3:15548418-15548437 None:intergenic 25.0%
! TTAAGACCTGATTTAAAAAG+AGG + chr5_3:15548552-15548571 Msa0801540:CDS 25.0%
!! AATGTTCCTCTTTTTAAATC+AGG - chr5_3:15548561-15548580 None:intergenic 25.0%
! CATAGGAGAAGATAAAAATA+GGG - chr5_3:15548662-15548681 None:intergenic 25.0%
!! TTCATTTTCTTCTTATCAGA+TGG + chr5_3:15548773-15548792 Msa0801540:intron 25.0%
! TCATTGGATAATAATATCTC+TGG - chr5_3:15548970-15548989 None:intergenic 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG - chr5_3:15548986-15549005 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG + chr5_3:15549103-15549122 Msa0801540:CDS 25.0%
!! TATTTTTCTAACTGGAACAT+AGG + chr5_3:15549218-15549237 Msa0801540:intron 25.0%
!! ATTTTTCTAACTGGAACATA+GGG + chr5_3:15549219-15549238 Msa0801540:intron 25.0%
! TCCATTTCATAAAATCACTT+GGG + chr5_3:15549337-15549356 Msa0801540:intron 25.0%
! AATTAAAGAATGCTTCCAAA+GGG - chr5_3:15549368-15549387 None:intergenic 25.0%
! AAATTAAAGAATGCTTCCAA+AGG - chr5_3:15549369-15549388 None:intergenic 25.0%
! TCAGAACAAAAGAAATTGAA+TGG - chr5_3:15549510-15549529 None:intergenic 25.0%
!! TTCTTTGTTATATAGTGCAA+TGG + chr5_3:15549533-15549552 Msa0801540:intron 25.0%
!! TCTTTGTTATATAGTGCAAT+GGG + chr5_3:15549534-15549553 Msa0801540:intron 25.0%
! TTCAGATAGTGAAATGTTTA+TGG + chr5_3:15549566-15549585 Msa0801540:intron 25.0%
!!! TAACAAGAAACATTTTAACG+AGG + chr5_3:15549696-15549715 Msa0801540:CDS 25.0%
! CTTATAAACCTTATAGTCAA+AGG + chr5_3:15549752-15549771 Msa0801540:intron 25.0%
! AACTATGACACAAATAAAAG+GGG - chr5_3:15550024-15550043 None:intergenic 25.0%
! GAACTATGACACAAATAAAA+GGG - chr5_3:15550025-15550044 None:intergenic 25.0%
! AGAACTATGACACAAATAAA+AGG - chr5_3:15550026-15550045 None:intergenic 25.0%
! TTCTATTCAAAATCAAGCAA+TGG + chr5_3:15550042-15550061 Msa0801540:CDS 25.0%
! AGAAGAATAAAAAAGAAGCA+AGG + chr5_3:15550071-15550090 Msa0801540:exon 25.0%
! AAAAAAGAAGCAAGGTAAAA+AGG + chr5_3:15550079-15550098 Msa0801540:intron 25.0%
! AAAAAGAAGCAAGGTAAAAA+GGG + chr5_3:15550080-15550099 Msa0801540:intron 25.0%
!!! TCTAATTTGTTCAACGATTA+AGG + chr5_3:15550197-15550216 Msa0801540:intron 25.0%
!! TAATATACATCAGCATTGAA+TGG + chr5_3:15550594-15550613 Msa0801540:three_prime_UTR 25.0%
! TGAAGATTATAGACAGAATA+TGG + chr5_3:15550828-15550847 Msa0801540:intron 25.0%
! TGATGAATGAATGTTGAATA+TGG + chr5_3:15551054-15551073 Msa0801540:intron 25.0%
! TGAATGTTGAATATGGTTAT+AGG + chr5_3:15551061-15551080 Msa0801540:intron 25.0%
! AGCAATTCCTAATAATATGT+TGG - chr5_3:15551194-15551213 Msa0801550:CDS 25.0%
! GTTAAAATGCTTCAAGAAAA+TGG - chr5_3:15551295-15551314 Msa0801550:CDS 25.0%
! GTAATTTTCGTCATCTCATA+TGG + chr5_3:15540637-15540656 Msa0801540:intron 30.0%
CCAATACTCAAACATATTAG+GGG - chr5_3:15540828-15540847 None:intergenic 30.0%
GCCAATACTCAAACATATTA+GGG - chr5_3:15540829-15540848 None:intergenic 30.0%
AGCCAATACTCAAACATATT+AGG - chr5_3:15540830-15540849 None:intergenic 30.0%
AAGTTATCTTTGTAGATTCC+TGG + chr5_3:15541063-15541082 Msa0801540:intron 30.0%
AGTTATCTTTGTAGATTCCT+GGG + chr5_3:15541064-15541083 Msa0801540:intron 30.0%
! TTATTCCAACCCTTTTCTTT+GGG - chr5_3:15541184-15541203 None:intergenic 30.0%
! TTTATTCCAACCCTTTTCTT+TGG - chr5_3:15541185-15541204 None:intergenic 30.0%
AAATTTATTCCCATCTCCAT+GGG - chr5_3:15541211-15541230 None:intergenic 30.0%
TAAATTTATTCCCATCTCCA+TGG - chr5_3:15541212-15541231 None:intergenic 30.0%
ATTCCTTGGAACATAAAGAT+GGG - chr5_3:15541331-15541350 None:intergenic 30.0%
TATTCCTTGGAACATAAAGA+TGG - chr5_3:15541332-15541351 None:intergenic 30.0%
TTCCAAGGAATATTATTCCT+AGG + chr5_3:15541340-15541359 Msa0801540:intron 30.0%
TTCCTAGGAATAATATTCCT+TGG - chr5_3:15541345-15541364 None:intergenic 30.0%
TTATCTCCACAAAAAATGTG+TGG - chr5_3:15541613-15541632 None:intergenic 30.0%
AACTGAAACGGAAACAAAAA+CGG + chr5_3:15541639-15541658 Msa0801540:intron 30.0%
!!! GCCATTTTTGGTTTTTTGTT+GGG - chr5_3:15541734-15541753 None:intergenic 30.0%
!!! AGCCATTTTTGGTTTTTTGT+TGG - chr5_3:15541735-15541754 None:intergenic 30.0%
GTGAAAAAAATGTGAAGTCA+AGG - chr5_3:15541868-15541887 None:intergenic 30.0%
AACTCTCTTTCTCTCTTATT+AGG + chr5_3:15541899-15541918 Msa0801540:intron 30.0%
!! GATGGTTCTAATGGATAATA+AGG + chr5_3:15541984-15542003 Msa0801540:intron 30.0%
CCATAATTCTTTATGCGAAT+GGG - chr5_3:15542087-15542106 None:intergenic 30.0%
TCCATAATTCTTTATGCGAA+TGG - chr5_3:15542088-15542107 None:intergenic 30.0%
ATACATGTTTGGTTAATCCA+CGG + chr5_3:15542159-15542178 Msa0801540:intron 30.0%
ATTTCCGGTGTAATTAAAAG+AGG - chr5_3:15542452-15542471 None:intergenic 30.0%
TCTCATATACAAGTATGAGA+AGG + chr5_3:15542630-15542649 Msa0801540:intron 30.0%
TTTCAATGTTGTTGCTAATG+TGG + chr5_3:15542687-15542706 Msa0801540:intron 30.0%
TTCAATGTTGTTGCTAATGT+GGG + chr5_3:15542688-15542707 Msa0801540:intron 30.0%
! GTACAAATTTTCAGATGTCA+TGG + chr5_3:15542788-15542807 Msa0801540:intron 30.0%
GAAAAGTCATATTCTTGCAA+TGG + chr5_3:15542818-15542837 Msa0801540:intron 30.0%
! TTACCATTTTACCCTTATTG+GGG + chr5_3:15542972-15542991 Msa0801540:intron 30.0%
! AAGGAAGAACATGAGTTTTA+GGG - chr5_3:15543145-15543164 None:intergenic 30.0%
TGATGAAGCAGAAATGAAAA+CGG - chr5_3:15543181-15543200 None:intergenic 30.0%
TTTCATTTCTGCTTCATCAA+AGG + chr5_3:15543182-15543201 Msa0801540:intron 30.0%
!!! TTTTGTGTTTTGGTGATTCT+GGG + chr5_3:15543366-15543385 Msa0801540:intron 30.0%
TCAAATTTCTACATGCATGA+GGG - chr5_3:15543460-15543479 None:intergenic 30.0%
ATCAAATTTCTACATGCATG+AGG - chr5_3:15543461-15543480 None:intergenic 30.0%
! AGAGTTAGATTTTCATTTGG+GGG + chr5_3:15543487-15543506 Msa0801540:intron 30.0%
TCTAATTCTAATCTTGCATG+TGG + chr5_3:15543664-15543683 Msa0801540:intron 30.0%
CTAATTCTAATCTTGCATGT+GGG + chr5_3:15543665-15543684 Msa0801540:intron 30.0%
TGTGAGAAGAATGTTAAGTT+TGG + chr5_3:15543713-15543732 Msa0801540:intron 30.0%
GTGAGAAGAATGTTAAGTTT+GGG + chr5_3:15543714-15543733 Msa0801540:intron 30.0%
AATGTTAAGTTTGGGTAAGA+GGG + chr5_3:15543722-15543741 Msa0801540:intron 30.0%
AGAGTAGAAGAAATGGAATT+AGG + chr5_3:15543775-15543794 Msa0801540:intron 30.0%
GAGTAGAAGAAATGGAATTA+GGG + chr5_3:15543776-15543795 Msa0801540:intron 30.0%
CCTTTAATTCTTTATGGTGA+TGG - chr5_3:15543909-15543928 None:intergenic 30.0%
CCATCACCATAAAGAATTAA+AGG + chr5_3:15543906-15543925 Msa0801540:intron 30.0%
TCACCATAAAGAATTAAAGG+TGG + chr5_3:15543909-15543928 Msa0801540:intron 30.0%
CACCATAAAGAATTAAAGGT+GGG + chr5_3:15543910-15543929 Msa0801540:intron 30.0%
AACCCACCTTTAATTCTTTA+TGG - chr5_3:15543915-15543934 None:intergenic 30.0%
! GTTGATTTAGATTATGCATG+AGG - chr5_3:15543953-15543972 None:intergenic 30.0%
TGAATGATAGCATGATTGAA+AGG + chr5_3:15544100-15544119 Msa0801540:intron 30.0%
GGAGATTATAAAAATGAGCT+AGG + chr5_3:15544198-15544217 Msa0801540:intron 30.0%
TCACATGAAGACAATGAATT+TGG - chr5_3:15544483-15544502 None:intergenic 30.0%
ATAAAAGAAACTTGCAGTTC+TGG - chr5_3:15544658-15544677 None:intergenic 30.0%
!! TTTATTGCAGCAGTTGATAA+AGG + chr5_3:15544673-15544692 Msa0801540:intron 30.0%
TGCCAACATAGTGAATAAAA+AGG + chr5_3:15544710-15544729 Msa0801540:intron 30.0%
!! AATGTTTTCTGTTACTTGAC+AGG + chr5_3:15544857-15544876 Msa0801540:intron 30.0%
!! ATGTTTTCTGTTACTTGACA+GGG + chr5_3:15544858-15544877 Msa0801540:intron 30.0%
!!! TTGTTGTTTGATTGTGGTTT+TGG + chr5_3:15545040-15545059 Msa0801540:intron 30.0%
TTAAAGGAAACTGATAAGGT+TGG + chr5_3:15545165-15545184 Msa0801540:intron 30.0%
AGCAATATGGTGAAAGAAAA+TGG + chr5_3:15545191-15545210 Msa0801540:intron 30.0%
GCAATATGGTGAAAGAAAAT+GGG + chr5_3:15545192-15545211 Msa0801540:intron 30.0%
TAATTAGACCATGTTTGGAT+TGG - chr5_3:15545620-15545639 None:intergenic 30.0%
ACAGATAATTAGACCATGTT+TGG - chr5_3:15545625-15545644 None:intergenic 30.0%
! AAAAAGTGTAAATGCTGCAA+AGG - chr5_3:15545861-15545880 None:intergenic 30.0%
TGTAGGTACTTTGACAATTA+TGG + chr5_3:15545928-15545947 Msa0801540:intron 30.0%
AGAAATGAAAAGGTCTCATA+TGG + chr5_3:15546042-15546061 Msa0801540:CDS 30.0%
! TACTTATATTTAAGGTCGGA+GGG - chr5_3:15546114-15546133 None:intergenic 30.0%
CATGACTTTCAATTGCTTAA+TGG + chr5_3:15546340-15546359 Msa0801540:intron 30.0%
GTCATAACTTAGTTGTGTTA+TGG + chr5_3:15546457-15546476 Msa0801540:intron 30.0%
GACAATAAATGCTACAACAA+TGG - chr5_3:15546487-15546506 None:intergenic 30.0%
TTGTAGCATTTATTGTCTAG+AGG + chr5_3:15546490-15546509 Msa0801540:intron 30.0%
TTGGGAGAATTTATATTTCC+TGG + chr5_3:15546570-15546589 Msa0801540:intron 30.0%
TGTTATCTCTGTAAAACCAT+TGG + chr5_3:15546631-15546650 Msa0801540:intron 30.0%
! AAGTTTACTGATTAAGAAGC+AGG - chr5_3:15546679-15546698 None:intergenic 30.0%
TCTTAATCAGTAAACTTCTC+TGG + chr5_3:15546682-15546701 Msa0801540:intron 30.0%
ATTGTGTTCCAACAAAATGA+TGG - chr5_3:15546846-15546865 None:intergenic 30.0%
!!! TACCTTCGTGTTGATTTTTA+TGG - chr5_3:15546994-15547013 None:intergenic 30.0%
ATACTAGACGAGATACAATT+AGG + chr5_3:15547058-15547077 Msa0801540:intron 30.0%
TCTTAAACGCAATGAGTAAA+TGG + chr5_3:15547276-15547295 Msa0801540:intron 30.0%
AGGTAAACAACAATAAGTAG+AGG - chr5_3:15547467-15547486 None:intergenic 30.0%
!! TCTACTTATTGTTGTTTACC+TGG + chr5_3:15547466-15547485 Msa0801540:intron 30.0%
AAATGAAAGAAGAGTCATGA+GGG - chr5_3:15547568-15547587 None:intergenic 30.0%
TAAATGAAAGAAGAGTCATG+AGG - chr5_3:15547569-15547588 None:intergenic 30.0%
AATTTCTGACATCGTATCAA+TGG - chr5_3:15547646-15547665 None:intergenic 30.0%
TCTATTTGATGTCAAGAGAA+AGG + chr5_3:15547685-15547704 Msa0801540:CDS 30.0%
CTATTTGATGTCAAGAGAAA+GGG + chr5_3:15547686-15547705 Msa0801540:CDS 30.0%
AGATCAAAGTGAGGAATTTA+AGG - chr5_3:15547827-15547846 None:intergenic 30.0%
CTGTCCTGATATATTATGTT+TGG + chr5_3:15547849-15547868 Msa0801540:intron 30.0%
AATAATAATCATCTCACCTC+TGG - chr5_3:15547935-15547954 None:intergenic 30.0%
!!! AAACGTGTCATTTTCATTGA+GGG - chr5_3:15547968-15547987 None:intergenic 30.0%
! CCAGAAAAAAAGTTTTCACT+TGG - chr5_3:15548021-15548040 None:intergenic 30.0%
!!! CCAAGTGAAAACTTTTTTTC+TGG + chr5_3:15548018-15548037 Msa0801540:intron 30.0%
!!! GAAAACTTTTTTTCTGGTCT+TGG + chr5_3:15548024-15548043 Msa0801540:intron 30.0%
!! TTGCTTTTCTTTCCCTTATT+TGG + chr5_3:15548114-15548133 Msa0801540:intron 30.0%
!! TTTCGAGTTTGAAATGAAGT+TGG + chr5_3:15548176-15548195 Msa0801540:CDS 30.0%
GATAGAAACAATTCTAGACA+AGG + chr5_3:15548209-15548228 Msa0801540:CDS 30.0%
AACAATATTTATTCTGCAGG+TGG - chr5_3:15548327-15548346 None:intergenic 30.0%
AGCAACAATATTTATTCTGC+AGG - chr5_3:15548330-15548349 None:intergenic 30.0%
ATTAATTTACCTGCTTGCTT+AGG - chr5_3:15548392-15548411 None:intergenic 30.0%
CCATAGGAGAAGATAAAAAT+AGG - chr5_3:15548663-15548682 None:intergenic 30.0%
!!! CCTATTTTTATCTTCTCCTA+TGG + chr5_3:15548660-15548679 Msa0801540:intron 30.0%
CAGACAATGAAATGAATCTA+TGG + chr5_3:15548827-15548846 Msa0801540:CDS 30.0%
TTGAACTCTCTGATTTCAAA+AGG - chr5_3:15548999-15549018 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG - chr5_3:15549069-15549088 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG + chr5_3:15549068-15549087 Msa0801540:CDS 30.0%
AAATTTCCCATCAAATCTGA+GGG - chr5_3:15549138-15549157 None:intergenic 30.0%
AAAATTTCCCATCAAATCTG+AGG - chr5_3:15549139-15549158 None:intergenic 30.0%
TTTGTATAACTCATCTGAAG+TGG - chr5_3:15549162-15549181 None:intergenic 30.0%
! TTTTTCTAACTGGAACATAG+GGG + chr5_3:15549220-15549239 Msa0801540:intron 30.0%
GTCCATTTCATAAAATCACT+TGG + chr5_3:15549336-15549355 Msa0801540:intron 30.0%
! ACCCAAGTGATTTTATGAAA+TGG - chr5_3:15549341-15549360 None:intergenic 30.0%
CTTACATAGGTATAGATTCA+AGG - chr5_3:15549401-15549420 None:intergenic 30.0%
! TTCTTGTTATCAGGTTTCAA+TGG - chr5_3:15549685-15549704 None:intergenic 30.0%
AGAAATTGCAGTTCTTTACA+TGG - chr5_3:15549856-15549875 None:intergenic 30.0%
! GGTTTTCATCTCAAATTGAT+CGG + chr5_3:15549993-15550012 Msa0801540:intron 30.0%
CAGAATGACAATGTAATTCA+TGG - chr5_3:15550130-15550149 None:intergenic 30.0%
TGTGAAAATATGAACTTAGG+TGG - chr5_3:15550309-15550328 None:intergenic 30.0%
CTGTGTGAAAATATGAACTT+AGG - chr5_3:15550312-15550331 None:intergenic 30.0%
GTTTGTATATTCTTAAGAGC+TGG + chr5_3:15550663-15550682 Msa0801540:three_prime_UTR 30.0%
ATGTTCCATTATATTCCTTG+AGG + chr5_3:15550703-15550722 Msa0801540:three_prime_UTR 30.0%
!! TTTTCTGCTCATATTTCTGA+AGG - chr5_3:15550886-15550905 Msa0801550:intron 30.0%
TTCAGAAATATGAGCAGAAA+AGG + chr5_3:15550885-15550904 Msa0801540:intron 30.0%
AAAAAACCATTGCTACAAAC+TGG + chr5_3:15550911-15550930 Msa0801540:intron 30.0%
ACCAAGAAAAATGAAAGACA+TGG + chr5_3:15550970-15550989 Msa0801540:intron 30.0%
!! ACCATGTCTTTCATTTTTCT+TGG - chr5_3:15550974-15550993 Msa0801550:intron 30.0%
TATGTTGGAAGAAATAAGCA+AGG - chr5_3:15551179-15551198 Msa0801550:CDS 30.0%
AAGAACAGAATCCAAAGAAA+TGG + chr5_3:15551490-15551509 Msa0801540:three_prime_UTR 30.0%
AGAACAGAATCCAAAGAAAT+GGG + chr5_3:15551491-15551510 Msa0801540:three_prime_UTR 30.0%
!!! TTTTTTCACTCCCATTTCTT+TGG - chr5_3:15551504-15551523 None:intergenic 30.0%
AATGGGAGTGAAAAAAGAAA+AGG + chr5_3:15551508-15551527 Msa0801540:three_prime_UTR 30.0%
ATGGGAGTGAAAAAAGAAAA+GGG + chr5_3:15551509-15551528 Msa0801540:three_prime_UTR 30.0%
ATTGCATGTCTTCACAAATA+AGG + chr5_3:15551603-15551622 Msa0801540:three_prime_UTR 30.0%
! TTTTGTGCTCCTGAATTTTG+TGG + chr5_3:15540661-15540680 Msa0801540:intron 35.0%
TGTGGACCGAAAGAAATAAT+AGG + chr5_3:15540679-15540698 Msa0801540:intron 35.0%
TTATTCTTTGTGGTGGCTTA+AGG + chr5_3:15540755-15540774 Msa0801540:intron 35.0%
!!! AAGCAGGTTGCTTTTGTTTT+CGG + chr5_3:15540780-15540799 Msa0801540:intron 35.0%
! TTGTTTTCGGTACCAAAATG+TGG + chr5_3:15540793-15540812 Msa0801540:intron 35.0%
CCCCTAATATGTTTGAGTAT+TGG + chr5_3:15540825-15540844 Msa0801540:intron 35.0%
ACTGTTCTCTTGTTACTCTT+TGG + chr5_3:15540853-15540872 Msa0801540:intron 35.0%
ACATTAATCTCTTCAGCACA+AGG - chr5_3:15540912-15540931 None:intergenic 35.0%
TTGTGCTGAAGAGATTAATG+TGG + chr5_3:15540911-15540930 Msa0801540:intron 35.0%
!! AAGTGGCTTTAAACCAACTA+AGG + chr5_3:15541027-15541046 Msa0801540:intron 35.0%
!! AGTGGCTTTAAACCAACTAA+GGG + chr5_3:15541028-15541047 Msa0801540:intron 35.0%
ATTCCTGGGAATAAAACGAT+AGG + chr5_3:15541078-15541097 Msa0801540:intron 35.0%
!! ATTCCTATCGTTTTATTCCC+AGG - chr5_3:15541084-15541103 None:intergenic 35.0%
! GGGAAAATTTTTCTATTCCC+AGG - chr5_3:15541164-15541183 None:intergenic 35.0%
! ATTTTCCCAAAGAAAAGGGT+TGG + chr5_3:15541176-15541195 Msa0801540:intron 35.0%
AATAAAGTTCCCATGGAGAT+GGG + chr5_3:15541199-15541218 Msa0801540:intron 35.0%
!!! TTCCTATTTTTATGGTTCCC+AGG + chr5_3:15541252-15541271 Msa0801540:intron 35.0%
TTCCTGGGAACCATAAAAAT+AGG - chr5_3:15541257-15541276 None:intergenic 35.0%
ATTCCCATCTTTATGTTCCA+AGG + chr5_3:15541325-15541344 Msa0801540:intron 35.0%
AAAATCGGAAGGAATACCTA+CGG + chr5_3:15541502-15541521 Msa0801540:intron 35.0%
GCCCAACAAAAAACCAAAAA+TGG + chr5_3:15541730-15541749 Msa0801540:intron 35.0%
CTTCTTTGCTCGTAACAATT+TGG + chr5_3:15541960-15541979 Msa0801540:intron 35.0%
!! CAATTTGGAGATGGTTCTAA+TGG + chr5_3:15541975-15541994 Msa0801540:intron 35.0%
TTTATGCGAATGGGAGATAT+CGG - chr5_3:15542078-15542097 None:intergenic 35.0%
CCCATTCGCATAAAGAATTA+TGG + chr5_3:15542084-15542103 Msa0801540:intron 35.0%
AGTATATTGGTCGAATCATG+TGG + chr5_3:15542107-15542126 Msa0801540:intron 35.0%
! GTTAATCCACGGATCATTTT+TGG + chr5_3:15542170-15542189 Msa0801540:intron 35.0%
CATCAATAACTACAGCGATT+CGG - chr5_3:15542203-15542222 None:intergenic 35.0%
TCAATGTTGTTGCTAATGTG+GGG + chr5_3:15542689-15542708 Msa0801540:intron 35.0%
CCATCATAATGTAGTTCAAC+GGG - chr5_3:15542863-15542882 None:intergenic 35.0%
CCCATCATAATGTAGTTCAA+CGG - chr5_3:15542864-15542883 None:intergenic 35.0%
CCGTTGAACTACATTATGAT+GGG + chr5_3:15542861-15542880 Msa0801540:intron 35.0%
! TACCATTTTACCCTTATTGG+GGG + chr5_3:15542973-15542992 Msa0801540:intron 35.0%
TACCAAAATACCCCCAATAA+GGG - chr5_3:15542986-15543005 None:intergenic 35.0%
TTACCAAAATACCCCCAATA+AGG - chr5_3:15542987-15543006 None:intergenic 35.0%
AAAAAAGGGAAAAGAGAGAG+AGG + chr5_3:15543066-15543085 Msa0801540:intron 35.0%
AAAAAGGGAAAAGAGAGAGA+GGG + chr5_3:15543067-15543086 Msa0801540:intron 35.0%
! GAAGGAAGAACATGAGTTTT+AGG - chr5_3:15543146-15543165 None:intergenic 35.0%
!!! CTTTTGTGTTTTGGTGATTC+TGG + chr5_3:15543365-15543384 Msa0801540:intron 35.0%
! AGATTTTCATTTGGGGGAAA+AGG + chr5_3:15543493-15543512 Msa0801540:intron 35.0%
! GATTTTCATTTGGGGGAAAA+GGG + chr5_3:15543494-15543513 Msa0801540:intron 35.0%
GAATGTTAAGTTTGGGTAAG+AGG + chr5_3:15543721-15543740 Msa0801540:intron 35.0%
ATGTTAAGTTTGGGTAAGAG+GGG + chr5_3:15543723-15543742 Msa0801540:intron 35.0%
GTTCTTCAAGACTGAGTAAT+TGG + chr5_3:15543836-15543855 Msa0801540:intron 35.0%
!! AGGTTTATTGATTTAGCCAC+TGG + chr5_3:15544120-15544139 Msa0801540:intron 35.0%
ATAACTGCAACTTATGCAAC+TGG - chr5_3:15544303-15544322 None:intergenic 35.0%
CATAAGTTGCAGTTATAAGC+TGG + chr5_3:15544307-15544326 Msa0801540:intron 35.0%
CATTGTCTTCATGTGAGTAT+TGG + chr5_3:15544487-15544506 Msa0801540:intron 35.0%
!! ATTCTGAAGCGTGTAGAAAA+AGG + chr5_3:15544907-15544926 Msa0801540:CDS 35.0%
ACTAAGGTAGCAGTTTATGT+TGG + chr5_3:15544986-15545005 Msa0801540:intron 35.0%
!! TAGCAGTTTATGTTGGTTTG+AGG + chr5_3:15544993-15545012 Msa0801540:intron 35.0%
!! GTTTATGTTGGTTTGAGGTT+AGG + chr5_3:15544998-15545017 Msa0801540:intron 35.0%
!! ATAAGGTTGGTGAAGCAATA+TGG + chr5_3:15545178-15545197 Msa0801540:intron 35.0%
CAAATAGCTGAGAAGTTAGA+AGG + chr5_3:15545217-15545236 Msa0801540:intron 35.0%
! TGACTGAGGATCAAATTTTC+AGG + chr5_3:15545322-15545341 Msa0801540:CDS 35.0%
AACTACACTTTGACTGTGTT+TGG + chr5_3:15545351-15545370 Msa0801540:intron 35.0%
!! GACAATCCTAGAAGTGTTTA+TGG + chr5_3:15545573-15545592 Msa0801540:intron 35.0%
CAAACAATCCAATCCAAACA+TGG + chr5_3:15545609-15545628 Msa0801540:intron 35.0%
TATAGGATCGATCACTATCT+TGG + chr5_3:15545691-15545710 Msa0801540:intron 35.0%
!! TCAGAAGATTTTGGTACTGA+AGG + chr5_3:15545814-15545833 Msa0801540:CDS 35.0%
TTCATATCTGTTCCATGTGT+AGG + chr5_3:15545911-15545930 Msa0801540:intron 35.0%
! ATTGTCAAAGTACCTACACA+TGG - chr5_3:15545926-15545945 None:intergenic 35.0%
TTCTACATCCAAACTAACAG+GGG - chr5_3:15546016-15546035 None:intergenic 35.0%
CTTCTACATCCAAACTAACA+GGG - chr5_3:15546017-15546036 None:intergenic 35.0%
TCTTCTACATCCAAACTAAC+AGG - chr5_3:15546018-15546037 None:intergenic 35.0%
! CTACTTATATTTAAGGTCGG+AGG - chr5_3:15546115-15546134 None:intergenic 35.0%
!!! AAAGTCCAGGTTTTAAACTC+TGG - chr5_3:15546215-15546234 None:intergenic 35.0%
!! TGATTTTGAGAAGAAAGTCC+AGG - chr5_3:15546228-15546247 None:intergenic 35.0%
TCTTCTCAAAATCATTTGGG+TGG + chr5_3:15546234-15546253 Msa0801540:intron 35.0%
! TCAATTGCTTAATGGATGTC+AGG + chr5_3:15546348-15546367 Msa0801540:intron 35.0%
! TTATTGTCTAGAGGCATGTT+TGG + chr5_3:15546499-15546518 Msa0801540:intron 35.0%
!! AGTAAACTTCTCTGGTCTTA+AGG + chr5_3:15546690-15546709 Msa0801540:intron 35.0%
!! TTCTCTGGTCTTAAGGAAAA+TGG + chr5_3:15546697-15546716 Msa0801540:intron 35.0%
! CAGCATTTCCATCATTTTGT+TGG + chr5_3:15546835-15546854 Msa0801540:intron 35.0%
AGTGTCTCATATTGCAAAGA+CGG - chr5_3:15546893-15546912 None:intergenic 35.0%
TGCGCATTGTTTGATATCAT+TGG + chr5_3:15546942-15546961 Msa0801540:intron 35.0%
AGCCATAAAAATCAACACGA+AGG + chr5_3:15546989-15547008 Msa0801540:intron 35.0%
ACGAAGGTAAATCAATGTAG+CGG + chr5_3:15547005-15547024 Msa0801540:intron 35.0%
! TAAATCAATGTAGCGGAGAT+CGG + chr5_3:15547012-15547031 Msa0801540:intron 35.0%
GATTGATGTTGACACTGAAA+AGG - chr5_3:15547345-15547364 None:intergenic 35.0%
GTCAACATCAATCCTAATGA+AGG + chr5_3:15547352-15547371 Msa0801540:intron 35.0%
AATGAAAGAAGAGTCATGAG+GGG - chr5_3:15547567-15547586 None:intergenic 35.0%
AGGTAAACAACAATAAGTGG+AGG - chr5_3:15547807-15547826 None:intergenic 35.0%
! ATTTTCCTGCAGTCTCATTT+AGG + chr5_3:15547873-15547892 Msa0801540:intron 35.0%
! CTCTATGATTTGCACATTAC+TGG + chr5_3:15547896-15547915 Msa0801540:CDS 35.0%
!!! CAAACGTGTCATTTTCATTG+AGG - chr5_3:15547969-15547988 None:intergenic 35.0%
TGTCAGACATCACCAAATAA+GGG - chr5_3:15548129-15548148 None:intergenic 35.0%
TTATCAGGTTTGCAAAGATG+TGG + chr5_3:15548498-15548517 Msa0801540:intron 35.0%
TTCATGCAGTACTAGGAAAT+AGG + chr5_3:15548613-15548632 Msa0801540:CDS 35.0%
TATCACTCTTGCTTAACCAT+AGG - chr5_3:15548679-15548698 None:intergenic 35.0%
ATGGTTAAGCAAGAGTGATA+AGG + chr5_3:15548679-15548698 Msa0801540:intron 35.0%
TATCAGATGGTCTCAAATTG+CGG + chr5_3:15548786-15548805 Msa0801540:intron 35.0%
TTATTCTCAACCTCAGACAA+TGG - chr5_3:15548910-15548929 None:intergenic 35.0%
! TTGTCTGAGGTTGAGAATAA+TGG + chr5_3:15548910-15548929 Msa0801540:CDS 35.0%
! TTCACCAAAAGCATATGCAA+TGG + chr5_3:15549062-15549081 Msa0801540:CDS 35.0%
ATTCAACCCTCAGATTTGAT+GGG + chr5_3:15549129-15549148 Msa0801540:intron 35.0%
TTATATAGTGCAATGGGCAT+AGG + chr5_3:15549540-15549559 Msa0801540:intron 35.0%
AATGGTTTCCTTGAAACTGA+AGG - chr5_3:15549667-15549686 None:intergenic 35.0%
ATTCATGTTCAGTTGCTTCT+GGG + chr5_3:15549722-15549741 Msa0801540:CDS 35.0%
TTTGACACCCTTTGACTATA+AGG - chr5_3:15549763-15549782 None:intergenic 35.0%
AAAGAACTGCAATTTCTGTG+AGG + chr5_3:15549859-15549878 Msa0801540:intron 35.0%
GAAAATATGAACTTAGGTGG+AGG - chr5_3:15550306-15550325 None:intergenic 35.0%
ATATAGTCCGAGACAGATAT+GGG + chr5_3:15550343-15550362 Msa0801540:three_prime_UTR 35.0%
TGGGAAGAAAGAATGATTGT+AGG + chr5_3:15550362-15550381 Msa0801540:three_prime_UTR 35.0%
! TTATGCTCTAGATTTGAGTC+TGG + chr5_3:15550567-15550586 Msa0801540:three_prime_UTR 35.0%
CCTTTCCTCAAGGAATATAA+TGG - chr5_3:15550711-15550730 Msa0801550:CDS 35.0%
CCATTATATTCCTTGAGGAA+AGG + chr5_3:15550708-15550727 Msa0801540:three_prime_UTR 35.0%
TATTGCAGATACATTGCACT+TGG - chr5_3:15550741-15550760 Msa0801550:intron 35.0%
AGATTACCAGTTTGTAGCAA+TGG - chr5_3:15550920-15550939 Msa0801550:intron 35.0%
AACTTGATGTTTAATCCACC+AGG + chr5_3:15551100-15551119 Msa0801540:intron 35.0%
ACTTGATGTTTAATCCACCA+GGG + chr5_3:15551101-15551120 Msa0801540:intron 35.0%
!! TCCTAAAGTTGCTGATTCTT+GGG - chr5_3:15551155-15551174 Msa0801550:CDS 35.0%
!! ATCCTAAAGTTGCTGATTCT+TGG - chr5_3:15551156-15551175 Msa0801550:CDS 35.0%
TTTGTTAGGGACTGATATTG+AGG - chr5_3:15551224-15551243 Msa0801550:CDS 35.0%
ACTGTTTGATGCTGATGAAT+GGG - chr5_3:15551257-15551276 Msa0801550:CDS 35.0%
AACTGTTTGATGCTGATGAA+TGG - chr5_3:15551258-15551277 Msa0801550:CDS 35.0%
!! AGCATTTTAACGACGTTGTT+TGG + chr5_3:15551304-15551323 Msa0801540:three_prime_UTR 35.0%
!! ATTTTAACGACGTTGTTTGG+AGG + chr5_3:15551307-15551326 Msa0801540:three_prime_UTR 35.0%
TTCTTAAGTATGGCTTCATG+TGG - chr5_3:15551379-15551398 Msa0801550:CDS 35.0%
!!! TGATGGTGTCTGTTTTTGCT+TGG + chr5_3:15540398-15540417 Msa0801540:CDS 40.0%
GTCGCCAAATTTGTCTTTGT+TGG - chr5_3:15540445-15540464 None:intergenic 40.0%
TCTTTCGGTCCACAAAATTC+AGG - chr5_3:15540673-15540692 None:intergenic 40.0%
! TTTTCGGTACCAAAATGTGG+TGG + chr5_3:15540796-15540815 Msa0801540:intron 40.0%
GAATAAAGTTCCCATGGAGA+TGG + chr5_3:15541198-15541217 Msa0801540:intron 40.0%
CACGTACCCAACAGAAAAAA+AGG + chr5_3:15541667-15541686 Msa0801540:intron 40.0%
!! TTGCAGTTGCAAGCCATTTT+TGG - chr5_3:15541746-15541765 None:intergenic 40.0%
TGCTCGTAACAATTTGGAGA+TGG + chr5_3:15541966-15541985 Msa0801540:intron 40.0%
GAGATATCGGAAACGAATTC+GGG - chr5_3:15542065-15542084 None:intergenic 40.0%
GGAGATATCGGAAACGAATT+CGG - chr5_3:15542066-15542085 None:intergenic 40.0%
AGTCAACCAAAAATGATCCG+TGG - chr5_3:15542179-15542198 None:intergenic 40.0%
CGAATCGCTGTAGTTATTGA+TGG + chr5_3:15542201-15542220 Msa0801540:intron 40.0%
TTAATCCCTCATTCCTCACA+TGG + chr5_3:15542332-15542351 Msa0801540:intron 40.0%
TAATCCCTCATTCCTCACAT+GGG + chr5_3:15542333-15542352 Msa0801540:intron 40.0%
CAATGGAACTCAATCCAAGA+TGG + chr5_3:15542835-15542854 Msa0801540:intron 40.0%
CCCGTTGAACTACATTATGA+TGG + chr5_3:15542860-15542879 Msa0801540:intron 40.0%
TACCCCCAATAAGGGTAAAA+TGG - chr5_3:15542978-15542997 None:intergenic 40.0%
!!! TACCCTTATTGGGGGTATTT+TGG + chr5_3:15542981-15543000 Msa0801540:intron 40.0%
AAACGGAAGAAGGAAGAAGA+AGG - chr5_3:15543164-15543183 None:intergenic 40.0%
GCAGAAATGAAAACGGAAGA+AGG - chr5_3:15543174-15543193 None:intergenic 40.0%
! CATTCTATCTGAGACATGCA+TGG - chr5_3:15543310-15543329 None:intergenic 40.0%
TTTCTACATGCATGAGGGAA+AGG - chr5_3:15543455-15543474 None:intergenic 40.0%
! GGGGGAAAAGGGAATTTTTA+TGG + chr5_3:15543505-15543524 Msa0801540:intron 40.0%
AGGGAGAAGAGTAGAAGAAA+TGG + chr5_3:15543768-15543787 Msa0801540:intron 40.0%
CAAGACTGAGTAATTGGAGA+TGG + chr5_3:15543842-15543861 Msa0801540:intron 40.0%
AGTAATTGGAGATGGAAGCT+AGG + chr5_3:15543850-15543869 Msa0801540:intron 40.0%
AGATGGAAGCTAGGAACTTA+AGG + chr5_3:15543859-15543878 Msa0801540:intron 40.0%
AGATTATGCATGAGGGATGA+GGG - chr5_3:15543945-15543964 None:intergenic 40.0%
TAGATTATGCATGAGGGATG+AGG - chr5_3:15543946-15543965 None:intergenic 40.0%
! AAAGAAACTTGCAGTTCTGG+AGG - chr5_3:15544655-15544674 None:intergenic 40.0%
GCAACAGGGATCATATCATT+AGG - chr5_3:15544816-15544835 None:intergenic 40.0%
TGAAGCGTGTAGAAAAAGGT+TGG + chr5_3:15544911-15544930 Msa0801540:CDS 40.0%
GAAGCGTGTAGAAAAAGGTT+GGG + chr5_3:15544912-15544931 Msa0801540:CDS 40.0%
AAGCGTGTAGAAAAAGGTTG+GGG + chr5_3:15544913-15544932 Msa0801540:CDS 40.0%
TGAGGTTAGGAGATGGTTAT+TGG + chr5_3:15545011-15545030 Msa0801540:intron 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG + chr5_3:15545221-15545240 Msa0801540:intron 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG + chr5_3:15545222-15545241 Msa0801540:intron 40.0%
TGATCTTGTTAAAGCAGCTG+AGG - chr5_3:15545289-15545308 None:intergenic 40.0%
ATTCAAGCAGTATCTGACTG+AGG + chr5_3:15545308-15545327 Msa0801540:CDS 40.0%
!! ACACTTCTAGGATTGTCTGA+AGG - chr5_3:15545570-15545589 None:intergenic 40.0%
CTATCTTGGAAAAGAGCTTG+TGG + chr5_3:15545705-15545724 Msa0801540:CDS 40.0%
! TTTTTGAACCTTTGTGGTCG+AGG + chr5_3:15545761-15545780 Msa0801540:CDS 40.0%
ATGTATTTCCTCGACCACAA+AGG - chr5_3:15545772-15545791 None:intergenic 40.0%
AATACTAGCCCTCTTTGCAA+TGG + chr5_3:15545987-15546006 Msa0801540:CDS 40.0%
AATGGAAACCCCTGTTAGTT+TGG + chr5_3:15546005-15546024 Msa0801540:CDS 40.0%
TCGGTTAAATATAAGGTCGG+AGG + chr5_3:15546173-15546192 Msa0801540:intron 40.0%
! AGAAGCCAGAGTTTAAAACC+TGG + chr5_3:15546207-15546226 Msa0801540:intron 40.0%
CGATCTTTGCTGCAAAAACA+TGG + chr5_3:15546400-15546419 Msa0801540:intron 40.0%
TTCAGAAACTTCAACTGACC+AGG - chr5_3:15546591-15546610 None:intergenic 40.0%
ATGGTAGTTCTTCACCCAAA+CGG + chr5_3:15546770-15546789 Msa0801540:CDS 40.0%
!! CAAAAGTCCATTTGTTGTCC+AGG - chr5_3:15547186-15547205 None:intergenic 40.0%
!! CTGGACAACAAATGGACTTT+TGG + chr5_3:15547184-15547203 Msa0801540:CDS 40.0%
AGAATGGCTGAGTTTCATCT+TGG - chr5_3:15547592-15547611 None:intergenic 40.0%
CTGTCAGACATCACCAAATA+AGG - chr5_3:15548130-15548149 None:intergenic 40.0%
!! CTTATTTGGTGATGTCTGAC+AGG + chr5_3:15548128-15548147 Msa0801540:intron 40.0%
! CGAGTTTGAAATGAAGTTGG+CGG + chr5_3:15548179-15548198 Msa0801540:CDS 40.0%
GTTGCTGATAGAACAACGTA+TGG + chr5_3:15548344-15548363 Msa0801540:CDS 40.0%
GATAGAACAACGTATGGTCA+TGG + chr5_3:15548350-15548369 Msa0801540:CDS 40.0%
AAGAGGAACATTCTCACAAG+AGG + chr5_3:15548569-15548588 Msa0801540:CDS 40.0%
GTTGAACTTCATGCAGTACT+AGG + chr5_3:15548606-15548625 Msa0801540:CDS 40.0%
GTTAAGCAAGAGTGATAAGG+AGG + chr5_3:15548682-15548701 Msa0801540:intron 40.0%
ATTTCATTGTCTGTCCTTCC+CGG - chr5_3:15548820-15548839 None:intergenic 40.0%
CATGTTTGAAGAAGAGACTG+AGG + chr5_3:15548854-15548873 Msa0801540:CDS 40.0%
AAGAAGAGACTGAGGCAAAA+AGG + chr5_3:15548862-15548881 Msa0801540:CDS 40.0%
GACAATGGTTTATGAGTCAC+AGG - chr5_3:15548895-15548914 None:intergenic 40.0%
GACTCATAAACCATTGTCTG+AGG + chr5_3:15548897-15548916 Msa0801540:CDS 40.0%
! TGAGGTTGAGAATAATGGAG+AGG + chr5_3:15548915-15548934 Msa0801540:CDS 40.0%
GCATATGCAATGGAAATGGA+AGG + chr5_3:15549072-15549091 Msa0801540:CDS 40.0%
CATTCAACCCTCAGATTTGA+TGG + chr5_3:15549128-15549147 Msa0801540:intron 40.0%
ATCACTTGGGTAAAACCCTT+TGG + chr5_3:15549350-15549369 Msa0801540:intron 40.0%
TGAAGTCTCCTTCAGTTTCA+AGG + chr5_3:15549656-15549675 Msa0801540:CDS 40.0%
GATTCATGTTCAGTTGCTTC+TGG + chr5_3:15549721-15549740 Msa0801540:CDS 40.0%
TGCAGTTCTTTACATGGTCA+CGG - chr5_3:15549850-15549869 None:intergenic 40.0%
TGAACGTGCACAAAGAAGAA+AGG + chr5_3:15549932-15549951 Msa0801540:CDS 40.0%
AAGAAGCCATCAAACAGTTG+AGG + chr5_3:15550229-15550248 Msa0801540:three_prime_UTR 40.0%
ACTTCTCCTCAACTGTTTGA+TGG - chr5_3:15550238-15550257 None:intergenic 40.0%
! TATGCCAAGCTTTTACCATG+AGG + chr5_3:15550278-15550297 Msa0801540:three_prime_UTR 40.0%
! ATGCCAAGCTTTTACCATGA+GGG + chr5_3:15550279-15550298 Msa0801540:three_prime_UTR 40.0%
CATATAGTCCGAGACAGATA+TGG + chr5_3:15550342-15550361 Msa0801540:three_prime_UTR 40.0%
CTTTCTTCCCATATCTGTCT+CGG - chr5_3:15550353-15550372 None:intergenic 40.0%
! ATCAGCATTGAATGGAACTG+TGG + chr5_3:15550602-15550621 Msa0801540:three_prime_UTR 40.0%
CAAACATCTCTCAACAATGC+AGG - chr5_3:15550648-15550667 Msa0801550:CDS 40.0%
! GGTAAAAGCACAGTGAGTAA+AGG + chr5_3:15550991-15551010 Msa0801540:intron 40.0%
ACCCAAGAATCAGCAACTTT+AGG + chr5_3:15551151-15551170 Msa0801540:three_prime_UTR 40.0%
!! GGGTTATGACAGCTTTGTTA+GGG - chr5_3:15551237-15551256 Msa0801550:CDS 40.0%
!! TGGGTTATGACAGCTTTGTT+AGG - chr5_3:15551238-15551257 Msa0801550:CDS 40.0%
TTATGGAGTTGGAGTCAAGT+GGG - chr5_3:15551356-15551375 Msa0801550:CDS 40.0%
AGTATGGCTTCATGTGGTTA+TGG - chr5_3:15551373-15551392 Msa0801550:CDS 40.0%
AAAAGGGAACGTGTGATTCA+AGG + chr5_3:15551525-15551544 Msa0801540:three_prime_UTR 40.0%
TCACGACATCATTTCTCCAG+AGG + chr5_3:15540465-15540484 Msa0801540:CDS 45.0%
GAAACAAACGCACCCTTAGT+TGG - chr5_3:15541043-15541062 None:intergenic 45.0%
! TCCCAGGAACGTTTTATACC+CGG - chr5_3:15541148-15541167 None:intergenic 45.0%
GGGTTGGAATAAAGTTCCCA+TGG + chr5_3:15541192-15541211 Msa0801540:intron 45.0%
GATACCCATGTGAGGAATGA+GGG - chr5_3:15542340-15542359 None:intergenic 45.0%
!! ATTCCTCACATGGGTATCGA+TGG + chr5_3:15542342-15542361 Msa0801540:intron 45.0%
AATCCATCGATACCCATGTG+AGG - chr5_3:15542348-15542367 None:intergenic 45.0%
TAGTTCAACGGGAACCATCT+TGG - chr5_3:15542852-15542871 None:intergenic 45.0%
TCGGGAAGCAGAGAAAGAAA+GGG + chr5_3:15543090-15543109 Msa0801540:intron 45.0%
GCAGAAAATAGCTTCAGTGC+AGG + chr5_3:15544238-15544257 Msa0801540:intron 45.0%
! CTGTTACTTGACAGGGATGT+TGG + chr5_3:15544865-15544884 Msa0801540:intron 45.0%
GTAGAAAAAGGTTGGGGTCA+AGG + chr5_3:15544919-15544938 Msa0801540:CDS 45.0%
!! GTTGGTTTGAGGTTAGGAGA+TGG + chr5_3:15545004-15545023 Msa0801540:intron 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG + chr5_3:15545226-15545245 Msa0801540:intron 45.0%
CCACTGCCATAAACACTTCT+AGG - chr5_3:15545582-15545601 None:intergenic 45.0%
!! CCTAGAAGTGTTTATGGCAG+TGG + chr5_3:15545579-15545598 Msa0801540:intron 45.0%
!! GATTTTGGTACTGAAGGACG+TGG + chr5_3:15545820-15545839 Msa0801540:CDS 45.0%
AGGGGTTTCCATTGCAAAGA+GGG - chr5_3:15545998-15546017 None:intergenic 45.0%
TCCATAACCATGAGTCTCTG+AGG - chr5_3:15546284-15546303 None:intergenic 45.0%
! GCTTAATGGATGTCAGGTCA+AGG + chr5_3:15546354-15546373 Msa0801540:intron 45.0%
TGGTAGTTCTTCACCCAAAC+GGG + chr5_3:15546771-15546790 Msa0801540:CDS 45.0%
AGATCGGAATGTTGTGCTAG+AGG + chr5_3:15547028-15547047 Msa0801540:intron 45.0%
GGTGATTCCTGGACAACAAA+TGG + chr5_3:15547176-15547195 Msa0801540:CDS 45.0%
AGGACAGACAGATCAAAGTG+AGG - chr5_3:15547836-15547855 None:intergenic 45.0%
TAGAGCCTAAATGAGACTGC+AGG - chr5_3:15547881-15547900 None:intergenic 45.0%
CAACGTATGGTCATGGATGT+TGG + chr5_3:15548357-15548376 Msa0801540:CDS 45.0%
AGTTCAGTACCTAAGCAAGC+AGG + chr5_3:15548380-15548399 Msa0801540:CDS 45.0%
AAAGATGTGGTAAGAGCTGC+AGG + chr5_3:15548511-15548530 Msa0801540:CDS 45.0%
AAGAGTGATAAGGAGGTCGA+GGG + chr5_3:15548689-15548708 Msa0801540:intron 45.0%
TGAAGGAGACTTCAACTGCA+AGG - chr5_3:15549650-15549669 None:intergenic 45.0%
TGTGAGGTCGTTCAAATCCA+GGG + chr5_3:15549875-15549894 Msa0801540:intron 45.0%
! TTGCTTCTGCTCCAAGCTTT+TGG + chr5_3:15549904-15549923 Msa0801540:CDS 45.0%
ACGTGCACAAAGAAGAAAGG+AGG + chr5_3:15549935-15549954 Msa0801540:CDS 45.0%
! TGCCAAGCTTTTACCATGAG+GGG + chr5_3:15550280-15550299 Msa0801540:three_prime_UTR 45.0%
TCTCTCAACAATGCAGGACT+TGG - chr5_3:15550642-15550661 Msa0801550:CDS 45.0%
TGGCAATGAACCTTTCCTCA+AGG - chr5_3:15550721-15550740 Msa0801550:CDS 45.0%
! CTCATATTTCTGAAGGCTGC+AGG - chr5_3:15550879-15550898 Msa0801550:intron 45.0%
TATGGAGTTGGAGTCAAGTG+GGG - chr5_3:15551355-15551374 Msa0801550:CDS 45.0%
GTTATGGAGTTGGAGTCAAG+TGG - chr5_3:15551357-15551376 Msa0801550:CDS 45.0%
GCTTCATGTGGTTATGGAGT+TGG - chr5_3:15551367-15551386 Msa0801550:CDS 45.0%
!! AATAAAAAAATAAACAAATA+GGG - chr5_3:15542018-15542037 None:intergenic 5.0%
!! AAATAAAAAAATAAACAAAT+AGG - chr5_3:15542019-15542038 None:intergenic 5.0%
!!! TTTTATTAATATGTTTTATT+TGG + chr5_3:15545134-15545153 Msa0801540:intron 5.0%
!!! TTAGATAATTTAATTTAAAA+GGG + chr5_3:15547410-15547429 Msa0801540:intron 5.0%
!! GTTTGATGGTGTCGACACTC+AGG + chr5_3:15540557-15540576 Msa0801540:intron 50.0%
! GGGATTCGACCACCACATTT+TGG - chr5_3:15540808-15540827 None:intergenic 50.0%
TCCCGGGTATAAAACGTTCC+TGG + chr5_3:15541143-15541162 Msa0801540:intron 50.0%
! CCCAGGAACGTTTTATACCC+GGG - chr5_3:15541147-15541166 None:intergenic 50.0%
CCCGGGTATAAAACGTTCCT+GGG + chr5_3:15541144-15541163 Msa0801540:intron 50.0%
ATCGGAAGGAATACCTACGG+TGG + chr5_3:15541505-15541524 Msa0801540:intron 50.0%
GAATACCTACGGTGGAGTGT+TGG + chr5_3:15541513-15541532 Msa0801540:intron 50.0%
TATGACCAACACTCCACCGT+AGG - chr5_3:15541521-15541540 None:intergenic 50.0%
CGATACCCATGTGAGGAATG+AGG - chr5_3:15542341-15542360 None:intergenic 50.0%
AGGGAAAAGAGAGAGAGGGT+CGG + chr5_3:15543071-15543090 Msa0801540:intron 50.0%
GTCGGGAAGCAGAGAAAGAA+AGG + chr5_3:15543089-15543108 Msa0801540:intron 50.0%
CGGGAAGCAGAGAAAGAAAG+GGG + chr5_3:15543091-15543110 Msa0801540:intron 50.0%
ATGCATGAGGGATGAGGGAA+AGG - chr5_3:15543940-15543959 None:intergenic 50.0%
!! GGTTTTATGGACTGCTGTGC+TGG + chr5_3:15544386-15544405 Msa0801540:intron 50.0%
! ATGGACTGCTGTGCTGGAAT+TGG + chr5_3:15544392-15544411 Msa0801540:CDS 50.0%
GGATTGTCTGAAGGAGCTCA+TGG - chr5_3:15545561-15545580 None:intergenic 50.0%
CAGGGGTTTCCATTGCAAAG+AGG - chr5_3:15545999-15546018 None:intergenic 50.0%
GCCTCAGAGACTCATGGTTA+TGG + chr5_3:15546280-15546299 Msa0801540:intron 50.0%
GATCGACGAATCGACTGAGT+AGG - chr5_3:15546385-15546404 None:intergenic 50.0%
GGTAGTTCTTCACCCAAACG+GGG + chr5_3:15546772-15546791 Msa0801540:CDS 50.0%
GAAGTGCAATAGCCCCGTTT+GGG - chr5_3:15546787-15546806 None:intergenic 50.0%
TGAAGTGCAATAGCCCCGTT+TGG - chr5_3:15546788-15546807 None:intergenic 50.0%
TGTCCAGGAATCACCTTCAC+CGG - chr5_3:15547171-15547190 None:intergenic 50.0%
GATGCAAGCACAAATTCGCC+AGG - chr5_3:15547487-15547506 None:intergenic 50.0%
TTGTCTTCTAGCGCTGCGTT+CGG - chr5_3:15547758-15547777 None:intergenic 50.0%
!! TGGCTTTATAGAGCGTCCAG+AGG + chr5_3:15547916-15547935 Msa0801540:CDS 50.0%
CAAGAGTGATAAGGAGGTCG+AGG + chr5_3:15548688-15548707 Msa0801540:intron 50.0%
TCAAATTGCGGCGCAATTGC+CGG + chr5_3:15548798-15548817 Msa0801540:CDS 50.0%
CTGTGAGGTCGTTCAAATCC+AGG + chr5_3:15549874-15549893 Msa0801540:intron 50.0%
CGTTCAGCTGACCAAAAGCT+TGG - chr5_3:15549918-15549937 None:intergenic 50.0%
CGACGTTGTTTGGAGGAAGT+TGG + chr5_3:15551314-15551333 Msa0801540:three_prime_UTR 50.0%
!! GTTTGGAGGAAGTTGGTGAG+TGG + chr5_3:15551321-15551340 Msa0801540:three_prime_UTR 50.0%
TCCAGAGGCTCGCTATTGTG+TGG + chr5_3:15540480-15540499 Msa0801540:CDS 55.0%
AGAGGCTCGCTATTGTGTGG+CGG + chr5_3:15540483-15540502 Msa0801540:CDS 55.0%
GCCTCACTTCGCTTCCCTTT+GGG + chr5_3:15540512-15540531 Msa0801540:CDS 55.0%
CAAGCGTGGATCGGGTTTGA+TGG + chr5_3:15540543-15540562 Msa0801540:intron 55.0%
GTGGTGGCTTAAGGCAAAGC+AGG + chr5_3:15540764-15540783 Msa0801540:intron 55.0%
GGGAAAAGAGAGAGAGGGTC+GGG + chr5_3:15543072-15543091 Msa0801540:intron 55.0%
GTTTGGGTAAGAGGGGTCTG+AGG + chr5_3:15543730-15543749 Msa0801540:intron 55.0%
!! ATGGTGATGGCAGCAAGCTC+TGG - chr5_3:15543896-15543915 None:intergenic 55.0%
GCAAGCAGTGTAGAGAGCGA+TGG + chr5_3:15545248-15545267 Msa0801540:intron 55.0%
! TTGGTACTGAAGGACGTGGC+AGG + chr5_3:15545824-15545843 Msa0801540:CDS 55.0%
!! TCTCTGAGGCGTAGCTCAAG+TGG - chr5_3:15546270-15546289 None:intergenic 55.0%
AGCTACGCCTCAGAGACTCA+TGG + chr5_3:15546274-15546293 Msa0801540:intron 55.0%
GCATCTCAACCTGCCTTCTC+CGG + chr5_3:15547149-15547168 Msa0801540:CDS 55.0%
GGAATCACCTTCACCGGAGA+AGG - chr5_3:15547165-15547184 None:intergenic 55.0%
TCTCCGGTGAAGGTGATTCC+TGG + chr5_3:15547165-15547184 Msa0801540:CDS 55.0%
TGGAGCAGCTCAGTCAGACT+TGG + chr5_3:15547204-15547223 Msa0801540:CDS 55.0%
GGAGCAGCTCAGTCAGACTT+GGG + chr5_3:15547205-15547224 Msa0801540:CDS 55.0%
TGTCTTCTAGCGCTGCGTTC+GGG - chr5_3:15547757-15547776 None:intergenic 55.0%
GTGGTAAGAGCTGCAGGCTT+AGG + chr5_3:15548517-15548536 Msa0801540:CDS 55.0%
GTAAGAGCTGCAGGCTTAGG+TGG + chr5_3:15548520-15548539 Msa0801540:CDS 55.0%
CAAATTGCGGCGCAATTGCC+GGG + chr5_3:15548799-15548818 Msa0801540:CDS 55.0%
GGCCCCTCATGGTAAAAGCT+TGG - chr5_3:15550285-15550304 None:intergenic 55.0%
TCCACCAGGGTACAAGTAGC+TGG + chr5_3:15551114-15551133 Msa0801540:three_prime_UTR 55.0%
ACCAGCTACTTGTACCCTGG+TGG - chr5_3:15551118-15551137 Msa0801550:CDS 55.0%
GTCACCAGCTACTTGTACCC+TGG - chr5_3:15551121-15551140 Msa0801550:CDS 55.0%
!! AGGAAGTTGGTGAGTGGCCA+TGG + chr5_3:15551327-15551346 Msa0801540:three_prime_UTR 55.0%
TGGAGTCAAGTGGGGAACCA+TGG - chr5_3:15551347-15551366 Msa0801550:CDS 55.0%
GCCACACAATAGCGAGCCTC+TGG - chr5_3:15540484-15540503 None:intergenic 60.0%
GAGGCTCGCTATTGTGTGGC+GGG + chr5_3:15540484-15540503 Msa0801540:CDS 60.0%
!! CGCTATTGTGTGGCGGGTTG+TGG + chr5_3:15540490-15540509 Msa0801540:CDS 60.0%
GGCCTCACTTCGCTTCCCTT+TGG + chr5_3:15540511-15540530 Msa0801540:CDS 60.0%
GCCCAAAGGGAAGCGAAGTG+AGG - chr5_3:15540516-15540535 None:intergenic 60.0%
CTTCGCTTCCCTTTGGGCGA+TGG + chr5_3:15540518-15540537 Msa0801540:CDS 60.0%
CGCTTGCACCATCGCCCAAA+GGG - chr5_3:15540529-15540548 None:intergenic 60.0%
ACGCTTGCACCATCGCCCAA+AGG - chr5_3:15540530-15540549 None:intergenic 60.0%
TTTGGGCGATGGTGCAAGCG+TGG + chr5_3:15540529-15540548 Msa0801540:CDS 60.0%
GCGATGGTGCAAGCGTGGAT+CGG + chr5_3:15540534-15540553 Msa0801540:CDS 60.0%
CGATGGTGCAAGCGTGGATC+GGG + chr5_3:15540535-15540554 Msa0801540:CDS 60.0%
TGAGGTCGAGAGTGAGGCAG+AGG + chr5_3:15543748-15543767 Msa0801540:intron 60.0%
GAGGTCGAGAGTGAGGCAGA+GGG + chr5_3:15543749-15543768 Msa0801540:intron 60.0%
CAACCTGCCTTCTCCGGTGA+AGG + chr5_3:15547155-15547174 Msa0801540:CDS 60.0%
TCACCTTCACCGGAGAAGGC+AGG - chr5_3:15547161-15547180 None:intergenic 60.0%
CGAGGGCTCGATCTCACTCT+CGG + chr5_3:15548706-15548725 Msa0801540:intron 60.0%
AGCAGAAGCAACAGTCGCCC+TGG - chr5_3:15549895-15549914 None:intergenic 60.0%
ACTTAGGTGGAGGCCCCTCA+TGG - chr5_3:15550296-15550315 None:intergenic 60.0%
! GGGGTCTGAGGTCGAGAGTG+AGG + chr5_3:15543742-15543761 Msa0801540:intron 65.0%
CTTCTAGCGCTGCGTTCGGG+TGG - chr5_3:15547754-15547773 None:intergenic 65.0%
TTGCGGCGCAATTGCCGGGA+AGG + chr5_3:15548803-15548822 Msa0801540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 15540397 15551701 15540397 ID=Msa0801540;Name=Msa0801540
chr5_3 mRNA 15540397 15551701 15540397 ID=Msa0801540-mRNA-1;Parent=Msa0801540;Name=Msa0801540-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.52|0.5|0.9|0.84|0.8|20|987|630
chr5_3 exon 15540397 15540556 15540397 ID=Msa0801540-mRNA-1:exon:6431;Parent=Msa0801540-mRNA-1
chr5_3 exon 15544387 15544498 15544387 ID=Msa0801540-mRNA-1:exon:6432;Parent=Msa0801540-mRNA-1
chr5_3 exon 15544879 15544943 15544879 ID=Msa0801540-mRNA-1:exon:6433;Parent=Msa0801540-mRNA-1
chr5_3 exon 15545292 15545343 15545292 ID=Msa0801540-mRNA-1:exon:6434;Parent=Msa0801540-mRNA-1
chr5_3 exon 15545696 15545845 15545696 ID=Msa0801540-mRNA-1:exon:6435;Parent=Msa0801540-mRNA-1
chr5_3 exon 15545933 15546063 15545933 ID=Msa0801540-mRNA-1:exon:6436;Parent=Msa0801540-mRNA-1
chr5_3 exon 15546753 15546830 15546753 ID=Msa0801540-mRNA-1:exon:6437;Parent=Msa0801540-mRNA-1
chr5_3 exon 15547138 15547258 15547138 ID=Msa0801540-mRNA-1:exon:6438;Parent=Msa0801540-mRNA-1
chr5_3 exon 15547661 15547785 15547661 ID=Msa0801540-mRNA-1:exon:6439;Parent=Msa0801540-mRNA-1
chr5_3 exon 15547885 15547937 15547885 ID=Msa0801540-mRNA-1:exon:6440;Parent=Msa0801540-mRNA-1
chr5_3 exon 15548150 15548230 15548150 ID=Msa0801540-mRNA-1:exon:6441;Parent=Msa0801540-mRNA-1
chr5_3 exon 15548323 15548401 15548323 ID=Msa0801540-mRNA-1:exon:6442;Parent=Msa0801540-mRNA-1
chr5_3 exon 15548505 15548634 15548505 ID=Msa0801540-mRNA-1:exon:6443;Parent=Msa0801540-mRNA-1
chr5_3 exon 15548792 15549124 15548792 ID=Msa0801540-mRNA-1:exon:6444;Parent=Msa0801540-mRNA-1
chr5_3 exon 15549612 15549743 15549612 ID=Msa0801540-mRNA-1:exon:6445;Parent=Msa0801540-mRNA-1
chr5_3 exon 15549896 15549956 15549896 ID=Msa0801540-mRNA-1:exon:6446;Parent=Msa0801540-mRNA-1
chr5_3 exon 15550042 15550092 15550042 ID=Msa0801540-mRNA-1:exon:6447;Parent=Msa0801540-mRNA-1
chr5_3 exon 15550219 15550397 15550219 ID=Msa0801540-mRNA-1:exon:6448;Parent=Msa0801540-mRNA-1
chr5_3 exon 15550565 15550755 15550565 ID=Msa0801540-mRNA-1:exon:6449;Parent=Msa0801540-mRNA-1
chr5_3 exon 15551106 15551701 15551106 ID=Msa0801540-mRNA-1:exon:6450;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15540397 15540556 15540397 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15544387 15544498 15544387 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15544879 15544943 15544879 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15545292 15545343 15545292 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15545696 15545845 15545696 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15545933 15546063 15545933 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15546753 15546830 15546753 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15547138 15547258 15547138 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15547661 15547785 15547661 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15547885 15547937 15547885 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15548150 15548230 15548150 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15548323 15548401 15548323 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15548505 15548634 15548505 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15548792 15549124 15548792 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15549612 15549743 15549612 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15549896 15549956 15549896 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 CDS 15550042 15550071 15550042 ID=Msa0801540-mRNA-1:cds;Parent=Msa0801540-mRNA-1
chr5_3 three_prime_UTR 15550072 15550092 15550072 ID=Msa0801540-mRNA-1:three_prime_utr;Parent=Msa0801540-mRNA-1
chr5_3 three_prime_UTR 15550219 15550397 15550219 ID=Msa0801540-mRNA-1:three_prime_utr;Parent=Msa0801540-mRNA-1
chr5_3 three_prime_UTR 15550565 15550755 15550565 ID=Msa0801540-mRNA-1:three_prime_utr;Parent=Msa0801540-mRNA-1
chr5_3 three_prime_UTR 15551106 15551701 15551106 ID=Msa0801540-mRNA-1:three_prime_utr;Parent=Msa0801540-mRNA-1
Gene Sequence

>Msa0801540

ATGATGGTGTCTGTTTTTGCTTGGCGAATACTTCATGATAGATTACCAACAAAGACAAATTTGGCGACTCACGACATCATTTCTCCAGAGGCTCGCTATTGTGTGGCGGGTTGTGGCCTCACTTCGCTTCCCTTTGGGCGATGGTGCAAGCGTGGATCGGGTTTTATGGACTGCTGTGCTGGAATTGGTTTCTACAGATCAGTTTTAGTGTTAGATTTTTCTGAAATTGATTACTTTGAATTTGGATATGGGACCAAATTCATTGTCTTCATGGATGTTGGCAGTAATATCGCATTGAAAATTCTGAAGCGTGTAGAAAAAGGTTGGGGTCAAGGAACTGCTTTAACAAGATCATTCAAGCAGTATCTGACTGAGGATCAAATTTTCAGGATCGATCACTATCTTGGAAAAGAGCTTGTGGAAAATCTTTTTGTTCTCCGATTCTCAAATCTAATTTTTGAACCTTTGTGGTCGAGGAAATACATAAAAAATGTACAGTTGATATTCTCAGAAGATTTTGGTACTGAAGGACGTGGCAGGTACTTTGACAATTATGGTATAATTAGACATATTATGCAGAATCATCTACTTCAAATACTAGCCCTCTTTGCAATGGAAACCCCTGTTAGTTTGGATGTAGAAGACATTAGAAATGAAAAGGTCTCATATGTAATTGATATTACAAGGATGGTAGTTCTTCACCCAAACGGGGCTATTGCACTTCAGAAGCATTTTGAATCTGAAAAAGAAAAGATAGTTGCATCTCAACCTGCCTTCTCCGGTGAAGGTGATTCCTGGACAACAAATGGACTTTTGGAGCAGCTCAGTCAGACTTGGGATAAGTCAGATTATTTGTGTTACATGACAGAAAATTTATACGTGCAGATCTTTGATCTATTTGATGTCAAGAGAAAGGGTGTTGTTGATTTTGATGACTTCGTTAGATCTCTCAATGTCTTCCACCCGAACGCAGCGCTAGAAGACAATATAGAATTCTCATTTAGGCTCTATGATTTGCACATTACTGGCTTTATAGAGCGTCCAGAGGTCAAGCAAATGTTAATTGCACTTCTTTTCGAGTTTGAAATGAAGTTGGCGGATGATGTGATAGAAACAATTCTAGACAAGTCCACCTGCAGAATAAATATTGTTGCTGATAGAACAACGTATGGTCATGGATGTTGGAGTTCAGTACCTAAGCAAGCAGGTTTGCAAAGATGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGACCTGATTTAAAAAGAGGAACATTCTCACAAGAGGAAGAAAATCACATTGTTGAACTTCATGCAGTACTAGGAAATAGATGGTCTCAAATTGCGGCGCAATTGCCGGGAAGGACAGACAATGAAATGAATCTATGGAACTCATGTTTGAAGAAGAGACTGAGGCAAAAAGGTATAGATCCTGTGACTCATAAACCATTGTCTGAGGTTGAGAATAATGGAGAGGAAAATGCTAATAAGAGTCAAGAGAAAGCACCAGAGATATTATTATCCAATGAATTGAACCTTTTGAAATCAGAGAGTTCAAAATCAGATGCAGCTTCTAGCTATGAGCAAAGAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGAGTTAGTTTCGAAACTTTTGTTTTGACTGTTTGTGCCTTGCAGTTGAAGTCTCCTTCAGTTTCAAGGAAACCATTGAAACCTGATAACAAGAAACATTTTAACGAGGACGATTCATGTTCAGTTGCTTCTGGGGCGACTGTTGCTTCTGCTCCAAGCTTTTGGTCAGCTGAACGTGCACAAAGAAGAAAGGAGTTCTATTCAAAATCAAGCAATGGAAGCTGA
Protein sequence

>Msa0801540

MMVSVFAWRILHDRLPTKTNLATHDIISPEARYCVAGCGLTSLPFGRWCKRGSGFMDCCAGIGFYRSVLVLDFSEIDYFEFGYGTKFIVFMDVGSNIALKILKRVEKGWGQGTALTRSFKQYLTEDQIFRIDHYLGKELVENLFVLRFSNLIFEPLWSRKYIKNVQLIFSEDFGTEGRGRYFDNYGIIRHIMQNHLLQILALFAMETPVSLDVEDIRNEKVSYVIDITRMVVLHPNGAIALQKHFESEKEKIVASQPAFSGEGDSWTTNGLLEQLSQTWDKSDYLCYMTENLYVQIFDLFDVKRKGVVDFDDFVRSLNVFHPNAALEDNIEFSFRLYDLHITGFIERPEVKQMLIALLFEFEMKLADDVIETILDKSTCRINIVADRTTYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENHIVELHAVLGNRWSQIAAQLPGRTDNEMNLWNSCLKKRLRQKGIDPVTHKPLSEVENNGEENANKSQEKAPEILLSNELNLLKSESSKSDAASSYEQRTSSISPKAYAMEMEGSCNKEFFIDRVSFETFVLTVCALQLKSPSVSRKPLKPDNKKHFNEDDSCSVASGATVASAPSFWSAERAQRRKEFYSKSSNGS*