AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1050020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050020 MtrunA17_Chr3g0118981 48.763 283 116 8 1 271 841 1106 1.30e-65 228
Msa1050020 MtrunA17_Chr4g0018431 52.574 272 90 10 1 253 841 1092 2.94e-65 226
Msa1050020 MtrunA17_Chr2g0298531 46.415 265 103 9 1 245 829 1074 2.62e-46 172
Msa1050020 MtrunA17_Chr2g0298291 46.512 258 105 10 1 245 824 1061 3.10e-44 166
Msa1050020 MtrunA17_Chr3g0119001 40.217 276 109 10 2 260 835 1071 3.20e-36 142
Msa1050020 MtrunA17_Chr3g0102271 35.759 316 133 11 1 310 833 1084 1.49e-33 134
Msa1050020 MtrunA17_Chr3g0102281 38.722 266 127 10 1 253 832 1074 1.00e-31 128
Msa1050020 MtrunA17_Chr3g0102171 35.350 314 140 11 1 310 832 1086 2.02e-30 124
Msa1050020 MtrunA17_Chr3g0102121 38.776 245 109 9 1 233 833 1048 1.93e-27 115
Msa1050020 MtrunA17_Chr3g0102261 36.992 246 121 7 1 233 834 1058 1.02e-26 113
Msa1050020 MtrunA17_Chr3g0102131 36.820 239 120 8 1 233 834 1047 2.73e-24 106
Msa1050020 MtrunA17_Chr1g0187121 69.014 71 11 1 380 439 163 233 2.58e-20 92.4
Msa1050020 MtrunA17_Chr3g0102161 37.668 223 91 10 1 212 272 457 3.82e-17 83.6
Msa1050020 MtrunA17_Chr3g0102151 29.098 244 133 9 18 247 137 354 3.20e-16 80.1
Msa1050020 MtrunA17_Chr1g0193801 97.500 40 0 1 333 371 162 201 5.62e-15 76.3
Msa1050020 MtrunA17_Chr3g0102231 48.718 78 39 1 1 78 100 176 7.99e-12 66.2
Msa1050020 MtrunA17_Chr2g0330121 27.820 266 117 11 2 209 664 912 1.67e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050020 AT3G23090.5 34.559 136 73 3 320 439 77 212 3.39e-13 70.9
Msa1050020 AT3G23090.2 34.559 136 73 3 320 439 76 211 3.46e-13 70.9
Msa1050020 AT3G23090.1 34.559 136 73 3 320 439 76 211 3.55e-13 70.9
Msa1050020 AT3G23090.3 34.559 136 73 3 320 439 112 247 4.83e-13 70.9
Msa1050020 AT3G23090.4 34.559 136 73 3 320 439 112 247 4.91e-13 70.9

Find 136 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCTTTGGTAGGGATTTA+AGG 0.168680 7_2:-13875650 None:intergenic
GTTAAAATGCTTCAAGAAAA+TGG 0.189462 7_2:-13884044 Msa1050030:CDS
ATTTCTTCCAACATATTATT+AGG 0.203969 7_2:+13883936 Msa1050020:three_prime_UTR
GATTCATGTTCAGTTGCTTC+TGG 0.221500 7_2:+13882472 Msa1050020:CDS
ATTTCCATTGCATATGCTTT+TGG 0.239502 7_2:-13881817 None:intergenic
TTAAAATGTTTCTTGTTATC+AGG 0.245894 7_2:-13882442 None:intergenic
TTCAAGGATAAATCATCTTT+TGG 0.246460 7_2:+13876578 Msa1050020:CDS
TTGCTTCTGCTCCAAGCTTT+TGG 0.254437 7_2:+13882655 Msa1050020:CDS
GTCCAGATAATTGCAGTTAA+TGG 0.258870 7_2:-13875697 None:intergenic
TCATACGCAAAAGGTATTAA+TGG 0.261563 7_2:+13876047 Msa1050020:CDS
ATTGCATGTCTTCACAAATA+AGG 0.262358 7_2:+13884355 Msa1050020:three_prime_UTR
TCTACCATCCAAGTTGTATA+CGG 0.271451 7_2:-13876231 None:intergenic
ATCCTAAAGTTGCTGATTCT+TGG 0.280363 7_2:-13883905 Msa1050030:CDS
GAGTCACAACACCCCGAAAA+TGG 0.301955 7_2:+13876341 Msa1050020:CDS
CGGTTAACTGACGGTATAAA+AGG 0.314700 7_2:+13876194 Msa1050020:CDS
ACTTCTCCTCAACTGTTTGA+TGG 0.326642 7_2:-13882984 None:intergenic
CAATTAATATTCCTCCTATT+CGG 0.331124 7_2:+13875868 Msa1050020:CDS
CATATAGTCCGAGACAGATA+TGG 0.332987 7_2:+13883091 Msa1050020:three_prime_UTR
TGGGTTATGACAGCTTTGTT+AGG 0.333171 7_2:-13883987 Msa1050030:CDS
ATTCCTCCTATTCGGAAATC+AGG 0.335041 7_2:+13875876 Msa1050020:CDS
AAGCAAACTGGCACGGAACT+TGG 0.339423 7_2:-13875827 None:intergenic
AATTCAGATCATGTAATGTT+AGG 0.347096 7_2:+13876077 Msa1050020:CDS
AGCCATTAACTGCAATTATC+TGG 0.347118 7_2:+13875695 Msa1050020:CDS
GGGAAGGAGGGGAATGAAAG+TGG 0.349624 7_2:+13876122 Msa1050020:CDS
CCTTTCCTCAAGGAATATAA+TGG 0.356155 7_2:-13883457 Msa1050030:CDS
TGGCACGGAACTTGGGATTC+AGG 0.358116 7_2:-13875819 None:intergenic
TGAAGTCTCCTTCAGTTTCA+AGG 0.359899 7_2:+13882407 Msa1050020:CDS
TCCTAAAGTTGCTGATTCTT+GGG 0.362623 7_2:-13883904 Msa1050030:CDS
GATTAGGCCAATACTCCTTA+TGG 0.363186 7_2:+13875988 Msa1050020:CDS
AGTATGGCTTCATGTGGTTA+TGG 0.367564 7_2:-13884122 Msa1050030:CDS
CTAAGTTCCAAGTCACATTC+AGG 0.367747 7_2:-13876395 None:intergenic
AAGAACAGAATCCAAAGAAA+TGG 0.369003 7_2:+13884242 Msa1050020:three_prime_UTR
CGCAAGGATGCAGGAAGCTT+TGG 0.369178 7_2:-13875663 None:intergenic
TATGAACATGGAAAAGGATT+AGG 0.388892 7_2:+13875972 Msa1050020:CDS
CTTGGAACTTAGGTTGGGGC+TGG 0.395598 7_2:+13876406 Msa1050020:CDS
ACCCAAGAATCAGCAACTTT+AGG 0.400367 7_2:+13883903 Msa1050020:three_prime_UTR
TGGTATAAAACAAGGGCATC+CGG 0.402144 7_2:+13876008 Msa1050020:CDS
AAAAGCATATGCAATGGAAA+TGG 0.406668 7_2:+13881819 Msa1050020:CDS
CTGTTGTTTGAAAAGCAAAC+TGG 0.413482 7_2:-13875839 None:intergenic
ATTCATGTTCAGTTGCTTCT+GGG 0.418308 7_2:+13882473 Msa1050020:CDS
GAGCTACAACACCGAGCAAT+TGG 0.418383 7_2:+13876476 Msa1050020:CDS
CTGAATGTGACTTGGAACTT+AGG 0.422336 7_2:+13876396 Msa1050020:CDS
AACTGTTTGATGCTGATGAA+TGG 0.424478 7_2:-13884007 Msa1050030:CDS
CATAAGCCTGATTTCCGAAT+AGG 0.426298 7_2:-13875882 None:intergenic
TTCTTGTTATCAGGTTTCAA+TGG 0.432356 7_2:-13882433 None:intergenic
CTTTCTTCCCATATCTGTCT+CGG 0.437499 7_2:-13883099 None:intergenic
TGTGACTTGGAACTTAGGTT+GGG 0.444694 7_2:+13876401 Msa1050020:CDS
CGTCAGTTAACCGCTGGCCT+TGG 0.445957 7_2:-13876184 None:intergenic
GGGTTATGACAGCTTTGTTA+GGG 0.463256 7_2:-13883986 Msa1050030:CDS
AGAACAGAATCCAAAGAAAT+GGG 0.473481 7_2:+13884243 Msa1050020:three_prime_UTR
TGGGAAGAAAGAATGATTGT+AGG 0.476056 7_2:+13883111 Msa1050020:three_prime_UTR
GCTTCATGTGGTTATGGAGT+TGG 0.481868 7_2:-13884116 Msa1050030:CDS
ACTATCTATGAACATGGAAA+AGG 0.482878 7_2:+13875966 Msa1050020:CDS
GAAGTAAGAGACTCTACAAA+TGG 0.483520 7_2:+13876503 Msa1050020:CDS
TTGGAACTTAGGTTGGGGCT+GGG 0.484459 7_2:+13876407 Msa1050020:CDS
CCCGAAAATGGAGCTGAAGT+TGG 0.485360 7_2:+13876353 Msa1050020:CDS
AAAAGGGAACGTGTGATTCA+AGG 0.489998 7_2:+13884277 Msa1050020:three_prime_UTR
TAATATACATCAGCATTGAA+TGG 0.490605 7_2:+13883343 Msa1050020:three_prime_UTR
CGACGTTGTTTGGAGGAAGT+TGG 0.492551 7_2:+13884066 Msa1050020:three_prime_UTR
GGTCTTTCCTGAATGTGACT+TGG 0.493452 7_2:+13876388 Msa1050020:CDS
AACTTGATGTTTAATCCACC+AGG 0.497562 7_2:+13883852 Msa1050020:intron
CTACCATCCAAGTTGTATAC+GGG 0.497659 7_2:-13876230 None:intergenic
AAGCATCAAATTTAAATGAA+AGG 0.499411 7_2:-13876160 None:intergenic
CTGAAGTTGGAAAGGATTGT+GGG 0.499538 7_2:+13876366 Msa1050020:CDS
AGCAAACTGGCACGGAACTT+GGG 0.504253 7_2:-13875826 None:intergenic
GCTGAAGTTGGAAAGGATTG+TGG 0.506275 7_2:+13876365 Msa1050020:CDS
AGGAAGTTGGTGAGTGGCCA+TGG 0.507094 7_2:+13884079 Msa1050020:three_prime_UTR
CGTTCAGCTGACCAAAAGCT+TGG 0.507220 7_2:-13882666 None:intergenic
TTATGCTCTAGATTTGAGTC+TGG 0.508618 7_2:+13883316 Msa1050020:three_prime_UTR
ATATAGTCCGAGACAGATAT+GGG 0.518624 7_2:+13883092 Msa1050020:three_prime_UTR
AATGGTTTCCTTGAAACTGA+AGG 0.520980 7_2:-13882415 None:intergenic
ACTGTTTGATGCTGATGAAT+GGG 0.521377 7_2:-13884006 Msa1050030:CDS
ATGTGACTTGGAACTTAGGT+TGG 0.521970 7_2:+13876400 Msa1050020:CDS
GGTATAAAACAAGGGCATCC+GGG 0.524376 7_2:+13876009 Msa1050020:CDS
GGCCCCTCATGGTAAAAGCT+TGG 0.526227 7_2:-13883031 None:intergenic
TCTCTCAACAATGCAGGACT+TGG 0.528802 7_2:-13883388 Msa1050030:CDS
TTTGTTAGGGACTGATATTG+AGG 0.534874 7_2:-13883973 Msa1050030:CDS
AGCAATTCCTAATAATATGT+TGG 0.536423 7_2:-13883943 Msa1050030:CDS
GTTTGTATATTCTTAAGAGC+TGG 0.539478 7_2:+13883412 Msa1050020:three_prime_UTR
AAGGAGGGGAATGAAAGTGG+AGG 0.540253 7_2:+13876125 Msa1050020:CDS
TTTAAATTTGATGCTTACCA+AGG 0.540495 7_2:+13876167 Msa1050020:CDS
AATGCTCCCTCATACGCAAA+AGG 0.541014 7_2:+13876038 Msa1050020:CDS
TTCTTAAGTATGGCTTCATG+TGG 0.542109 7_2:-13884128 Msa1050030:CDS
CCATTATATTCCTTGAGGAA+AGG 0.542881 7_2:+13883457 Msa1050020:three_prime_UTR
TTACTTCAACTCCAATTGCT+CGG 0.551321 7_2:-13876487 None:intergenic
GCTTGAGAACTACGACGTGC+AGG 0.551993 7_2:+13875743 Msa1050020:CDS
TTATACCGTCAGTTAACCGC+TGG 0.555264 7_2:-13876190 None:intergenic
TCCACCAGGGTACAAGTAGC+TGG 0.558594 7_2:+13883866 Msa1050020:three_prime_UTR
CTGTGTGAAAATATGAACTT+AGG 0.558838 7_2:-13883058 None:intergenic
TTATGGAGTTGGAGTCAAGT+GGG 0.563532 7_2:-13884105 Msa1050030:CDS
ACTGACGGTATAAAAGGCTG+TGG 0.564838 7_2:+13876200 Msa1050020:CDS
GTCACCAGCTACTTGTACCC+TGG 0.565315 7_2:-13883870 Msa1050030:CDS
TATTGCAGATACATTGCACT+TGG 0.566057 7_2:-13883487 Msa1050030:intron
AAGCCTGATTTCCGAATAGG+AGG 0.566813 7_2:-13875879 None:intergenic
GGTCATCCCCGTATACAACT+TGG 0.567916 7_2:+13876223 Msa1050020:CDS
TGAACGTGCACAAAGAAGAA+AGG 0.570373 7_2:+13882683 Msa1050020:CDS
TTCTATTCAAAATCAAGCAA+TGG 0.570585 7_2:+13882793 Msa1050020:CDS
TTCACCAAAAGCATATGCAA+TGG 0.574736 7_2:+13881813 Msa1050020:CDS
ACTCCTTATGGTATAAAACA+AGG 0.574969 7_2:+13876000 Msa1050020:CDS
CAAACATCTCTCAACAATGC+AGG 0.576418 7_2:-13883394 Msa1050030:CDS
TGGCAATGAACCTTTCCTCA+AGG 0.576590 7_2:-13883467 Msa1050030:CDS
AGGATGCAGGAAGCTTTGGT+AGG 0.585969 7_2:-13875659 None:intergenic
GAAAATATGAACTTAGGTGG+AGG 0.586726 7_2:-13883052 None:intergenic
CTGACGGTATAAAAGGCTGT+GGG 0.588672 7_2:+13876201 Msa1050020:CDS
GTTATGGAGTTGGAGTCAAG+TGG 0.589186 7_2:-13884106 Msa1050030:CDS
TGGAGTCAAGTGGGGAACCA+TGG 0.589713 7_2:-13884096 Msa1050030:CDS
AAATGGAGCTGAAGTTGGAA+AGG 0.589775 7_2:+13876358 Msa1050020:CDS
ATGTTCCATTATATTCCTTG+AGG 0.590467 7_2:+13883452 Msa1050020:three_prime_UTR
GGATGCAGGAAGCTTTGGTA+GGG 0.596836 7_2:-13875658 None:intergenic
ACCAGCTACTTGTACCCTGG+TGG 0.596849 7_2:-13883867 Msa1050030:CDS
CAGGAAGTAAAGAGATATCA+CGG 0.597777 7_2:-13875800 None:intergenic
GTGACTTGGAACTTAGGTTG+GGG 0.600935 7_2:+13876402 Msa1050020:CDS
ACTTAGGTGGAGGCCCCTCA+TGG 0.602914 7_2:-13883042 None:intergenic
GCATATGCAATGGAAATGGA+AGG 0.607612 7_2:+13881823 Msa1050020:CDS
AAGAAGCCATCAAACAGTTG+AGG 0.607756 7_2:+13882978 Msa1050020:three_prime_UTR
GTTTGAAAAGCAAACTGGCA+CGG 0.608330 7_2:-13875834 None:intergenic
TGAGGGAGCATTAGTGCACC+CGG 0.610799 7_2:-13876027 None:intergenic
ATCTGTACTATCTATGAACA+TGG 0.612155 7_2:+13875960 Msa1050020:CDS
CTCCTTATGGTATAAAACAA+GGG 0.618950 7_2:+13876001 Msa1050020:CDS
GAACTTAGGTTGGGGCTGGG+CGG 0.627340 7_2:+13876410 Msa1050020:CDS
TGTGAAAATATGAACTTAGG+TGG 0.631869 7_2:-13883055 None:intergenic
GTTTGGAGGAAGTTGGTGAG+TGG 0.635572 7_2:+13884073 Msa1050020:three_prime_UTR
TATGTTGGAAGAAATAAGCA+AGG 0.636385 7_2:-13883928 Msa1050030:CDS
TGAAGGAGACTTCAACTGCA+AGG 0.644382 7_2:-13882398 None:intergenic
CAAGGCCAGCGGTTAACTGA+CGG 0.646686 7_2:+13876185 Msa1050020:CDS
ACTTGATGTTTAATCCACCA+GGG 0.662823 7_2:+13883853 Msa1050020:intron
ATCAGCATTGAATGGAACTG+TGG 0.669599 7_2:+13883351 Msa1050020:three_prime_UTR
ATCCCCGTATACAACTTGGA+TGG 0.674319 7_2:+13876227 Msa1050020:CDS
TGAAGTTGGAAAGGATTGTG+GGG 0.675011 7_2:+13876367 Msa1050020:CDS
TATGGAGTTGGAGTCAAGTG+GGG 0.676243 7_2:-13884104 Msa1050030:CDS
CAGTCTTTAAGATCGAGCAA+CGG 0.683533 7_2:-13875930 None:intergenic
TACCATCCAAGTTGTATACG+GGG 0.692961 7_2:-13876229 None:intergenic
ACGTGCACAAAGAAGAAAGG+AGG 0.694653 7_2:+13882686 Msa1050020:CDS
AAGGTACATAAAATAAAACA+AGG 0.694965 7_2:+13884374 Msa1050020:three_prime_UTR
TTGATGCTTACCAAGGCCAG+CGG 0.695602 7_2:+13876174 Msa1050020:CDS
TGACGGTATAAAAGGCTGTG+GGG 0.732372 7_2:+13876202 Msa1050020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAAAAAAATTA+AGG - chr7_2:13878497-13878516 None:intergenic 0.0%
!!! AATTTTTTTTATTTTTTTTA+TGG + chr7_2:13879230-13879249 Msa1050020:intron 0.0%
!! TTAAAAAAAAAAAATAATTA+TGG + chr7_2:13879461-13879480 Msa1050020:intron 0.0%
!!! AATTATTTTTATTTTTTTTA+TGG - chr7_2:13880408-13880427 None:intergenic 0.0%
!! GTTAATTAAAATGAAATAAA+TGG - chr7_2:13877049-13877068 None:intergenic 10.0%
!!! TTTTCAAAAGATTAAATAAT+TGG - chr7_2:13878192-13878211 None:intergenic 10.0%
!!! TAATGATTTTTTTAACAAAA+TGG + chr7_2:13878561-13878580 Msa1050020:intron 10.0%
!! AAAATTTAGTAAAAAAAATC+TGG + chr7_2:13879402-13879421 Msa1050020:intron 10.0%
!! AGAATTTAATAAAAAAAATC+TGG + chr7_2:13879510-13879529 Msa1050020:intron 10.0%
!! GAAAATTTAATAAAAAAATC+TGG + chr7_2:13879542-13879561 Msa1050020:intron 10.0%
!! TAATAAGAATAGAATTAAAA+AGG - chr7_2:13879949-13879968 None:intergenic 10.0%
!! TATAAAAAAATCAAAAATTC+AGG - chr7_2:13880001-13880020 None:intergenic 10.0%
!! AATTTAGTAAAAAAAAAATC+TGG - chr7_2:13880205-13880224 None:intergenic 10.0%
!! TTAAAAAACGAAAAAATATT+AGG - chr7_2:13880329-13880348 None:intergenic 10.0%
!!! AAATTTAATATTTTTCTAAC+TGG + chr7_2:13881961-13881980 Msa1050020:intron 10.0%
!! TTTAATTCCACTTAAAAATT+TGG + chr7_2:13876666-13876685 Msa1050020:intron 15.0%
!! ATTGTGTTAAAATATTTCAT+TGG + chr7_2:13876691-13876710 Msa1050020:intron 15.0%
!!! AATAAATGAAAAAGTTTTGT+AGG + chr7_2:13877127-13877146 Msa1050020:intron 15.0%
!!! TGAAAAAACTTCTTTTTAAA+AGG - chr7_2:13877344-13877363 None:intergenic 15.0%
!!! TTTAAAAAGAAGTTTTTTCA+AGG + chr7_2:13877344-13877363 Msa1050020:intron 15.0%
!!! TTAAAAAGAAGTTTTTTCAA+GGG + chr7_2:13877345-13877364 Msa1050020:intron 15.0%
!! TTAATTGCATATAATAACAA+GGG + chr7_2:13879018-13879037 Msa1050020:intron 15.0%
!! AATCCAAAAAAAAAAATTAC+CGG - chr7_2:13879093-13879112 None:intergenic 15.0%
!!! GTAATTTTTTTTTTTGGATT+CGG + chr7_2:13879093-13879112 Msa1050020:intron 15.0%
!!! CTTGTAAAAAAAATTTGTTT+TGG + chr7_2:13879118-13879137 Msa1050020:intron 15.0%
!! TATACAGAATATCAAAATAT+TGG - chr7_2:13879875-13879894 None:intergenic 15.0%
!!! CTTGTAAAAAAAATTTGTTT+TGG - chr7_2:13879118-13879137 None:intergenic 15.0%
!!! CAAAACAAATTTTTTTTACA+AGG + chr7_2:13880517-13880536 Msa1050020:intron 15.0%
!! TGTAAAAAAAAAATTGGATT+CGG - chr7_2:13880544-13880563 None:intergenic 15.0%
!!! AATCCAATTTTTTTTTTACA+GGG + chr7_2:13880544-13880563 Msa1050020:intron 15.0%
!! TGAAAAGATAAATTTATCAA+GGG - chr7_2:13881570-13881589 None:intergenic 15.0%
!! TTGAAAAGATAAATTTATCA+AGG - chr7_2:13881571-13881590 None:intergenic 15.0%
!! AGAATAAAATTAATTAGGAT+GGG - chr7_2:13881630-13881649 None:intergenic 15.0%
!! ACAACAGAATAAAATTAATT+AGG - chr7_2:13881635-13881654 None:intergenic 15.0%
!!! TTAATTAGTTTTGTTTCAAT+AGG + chr7_2:13882722-13882741 Msa1050020:intron 15.0%
!!! TAATTAGTTTTGTTTCAATA+GGG + chr7_2:13882723-13882742 Msa1050020:intron 15.0%
!! TAGAATTAATTATAAAGTAG+AGG - chr7_2:13883182-13883201 None:intergenic 15.0%
!! CTAAATCAAATAATAAGTTT+AGG - chr7_2:13883294-13883313 Msa1050030:CDS 15.0%
!!! CTAAACTTATTATTTGATTT+AGG + chr7_2:13883292-13883311 Msa1050020:intron 15.0%
!!! TTCTTTTATAGTGACATTTT+GGG + chr7_2:13876101-13876120 Msa1050020:CDS 20.0%
!! AAGCATCAAATTTAAATGAA+AGG - chr7_2:13876163-13876182 None:intergenic 20.0%
!! AGAATTTATAATTACGAAGT+AGG - chr7_2:13876628-13876647 None:intergenic 20.0%
!! AAAACTCAATAAAATTAGGA+AGG - chr7_2:13876933-13876952 None:intergenic 20.0%
!! CACAAAAACTCAATAAAATT+AGG - chr7_2:13876937-13876956 None:intergenic 20.0%
!!! AATGATTGTGTTTTTATTCA+TGG + chr7_2:13876983-13877002 Msa1050020:intron 20.0%
!! AAAAAACTATTTGTTCATAC+TGG + chr7_2:13877277-13877296 Msa1050020:intron 20.0%
!! TTTGTCTACAATATTCATAT+AGG - chr7_2:13877693-13877712 None:intergenic 20.0%
!! ATAGTATGGATATGTATAAA+AGG - chr7_2:13877766-13877785 None:intergenic 20.0%
!!! TTTTATACATATCCATACTA+TGG + chr7_2:13877765-13877784 Msa1050020:intron 20.0%
!! CTCACAAAATTATACTATTA+AGG - chr7_2:13878247-13878266 None:intergenic 20.0%
!!! TGATTTTTATGATACTATCA+AGG - chr7_2:13878436-13878455 None:intergenic 20.0%
!!! AGTGATTGATTTAAAATTAC+AGG - chr7_2:13878788-13878807 None:intergenic 20.0%
!! CTTAATTGCATATAATAACA+AGG + chr7_2:13879017-13879036 Msa1050020:intron 20.0%
!! TAATTGCATATAATAACAAG+GGG + chr7_2:13879019-13879038 Msa1050020:intron 20.0%
!! ATCCAAAAAAAAAAATTACC+GGG - chr7_2:13879092-13879111 None:intergenic 20.0%
!!! TTCCATTTTATTTTCAATAG+CGG - chr7_2:13880090-13880109 None:intergenic 20.0%
!!! GAATCCAATTTTTTTTTTAC+AGG + chr7_2:13880543-13880562 Msa1050020:intron 20.0%
!!! ATCCAATTTTTTTTTTACAG+GGG + chr7_2:13880545-13880564 Msa1050020:intron 20.0%
!! ATTCATACTCAATTCAATTT+GGG - chr7_2:13880774-13880793 None:intergenic 20.0%
!! TATTCATACTCAATTCAATT+TGG - chr7_2:13880775-13880794 None:intergenic 20.0%
!! AATTGAATTGAGTATGAATA+TGG + chr7_2:13880775-13880794 Msa1050020:intron 20.0%
!! ATGAAAATAAAATGCAAATC+AGG + chr7_2:13881207-13881226 Msa1050020:intron 20.0%
!! GTCATATTAGAATTCTTTAA+GGG - chr7_2:13881341-13881360 None:intergenic 20.0%
!! TGTCATATTAGAATTCTTTA+AGG - chr7_2:13881342-13881361 None:intergenic 20.0%
!! CAGAATAAAATTAATTAGGA+TGG - chr7_2:13881631-13881650 None:intergenic 20.0%
!!! TTAATTTTATTCTGTTGTAG+TGG + chr7_2:13881637-13881656 Msa1050020:intron 20.0%
!! ATAATCTTTCACTTATATCT+TGG - chr7_2:13882046-13882065 None:intergenic 20.0%
!!! TTTTATGAAATGGACTATAT+AGG - chr7_2:13882082-13882101 None:intergenic 20.0%
!! CAAAATCAATTATCTTACAT+AGG - chr7_2:13882165-13882184 None:intergenic 20.0%
!!! CTATGTAAGATAATTGATTT+TGG + chr7_2:13882163-13882182 Msa1050020:intron 20.0%
!!! TTAAAATGTTTCTTGTTATC+AGG - chr7_2:13882445-13882464 None:intergenic 20.0%
!! TTATAAACCTTATAGTCAAA+GGG + chr7_2:13882504-13882523 Msa1050020:intron 20.0%
!! AAAATATCATTGCTAGAATA+AGG - chr7_2:13882554-13882573 None:intergenic 20.0%
!! ATTTCTTCCAACATATTATT+AGG + chr7_2:13883936-13883955 Msa1050020:three_prime_UTR 20.0%
!!! CATTATTTTCTTCTTAAGTA+TGG - chr7_2:13884141-13884160 Msa1050030:CDS 20.0%
!! AAACTCAGAAGAAAAAAAAT+TGG - chr7_2:13884210-13884229 None:intergenic 20.0%
!! AAGGTACATAAAATAAAACA+AGG + chr7_2:13884374-13884393 Msa1050020:three_prime_UTR 20.0%
! CAATTAATATTCCTCCTATT+CGG + chr7_2:13875868-13875887 Msa1050020:CDS 25.0%
!!! TTTTATACCATAAGGAGTAT+TGG - chr7_2:13875998-13876017 None:intergenic 25.0%
! AATTCAGATCATGTAATGTT+AGG + chr7_2:13876077-13876096 Msa1050020:CDS 25.0%
!! CTTCTTTTATAGTGACATTT+TGG + chr7_2:13876100-13876119 Msa1050020:CDS 25.0%
!! TCTTTTATAGTGACATTTTG+GGG + chr7_2:13876102-13876121 Msa1050020:CDS 25.0%
! TTTAAATTTGATGCTTACCA+AGG + chr7_2:13876167-13876186 Msa1050020:CDS 25.0%
!! TTCAAGGATAAATCATCTTT+TGG + chr7_2:13876578-13876597 Msa1050020:CDS 25.0%
!!! ACAATTGCCAAATTTTTAAG+TGG - chr7_2:13876676-13876695 None:intergenic 25.0%
! GTTAAAATATTTCATTGGAC+AGG + chr7_2:13876696-13876715 Msa1050020:intron 25.0%
!! AATTAGGAAGGTTTTTACAA+AGG - chr7_2:13876921-13876940 None:intergenic 25.0%
!!! TTTTTGTGTTTTGCTTTTGT+TGG + chr7_2:13876949-13876968 Msa1050020:intron 25.0%
! TGCAATGTAAAACACTAATT+TGG - chr7_2:13877078-13877097 None:intergenic 25.0%
!!! TTTATTTTCTTGTGCGAATT+TGG + chr7_2:13877156-13877175 Msa1050020:intron 25.0%
!! TTATTTTCTTGTGCGAATTT+GGG + chr7_2:13877157-13877176 Msa1050020:intron 25.0%
!! ATCTTTCTAGTGCAATTATT+AGG - chr7_2:13877481-13877500 None:intergenic 25.0%
!! TATGATTCTCTTTTTCCATT+TGG - chr7_2:13877623-13877642 None:intergenic 25.0%
! ACAAAAAACCTATAGAAGTA+TGG + chr7_2:13877708-13877727 Msa1050020:intron 25.0%
! ACGTGTGATGATTTATAATA+AGG - chr7_2:13877809-13877828 None:intergenic 25.0%
!!! AGTATTTTGGACATTTACTT+TGG + chr7_2:13877950-13877969 Msa1050020:intron 25.0%
! TGATGAAAAATTAAGAGATG+AGG - chr7_2:13878095-13878114 None:intergenic 25.0%
! AGCATCAAATCAAATGTATA+AGG - chr7_2:13878341-13878360 None:intergenic 25.0%
!! AAGATTTTGAACAAGTTACT+AGG + chr7_2:13878517-13878536 Msa1050020:intron 25.0%
!! AGGAATAACTTTTCATTTTG+AGG + chr7_2:13878537-13878556 Msa1050020:intron 25.0%
! TTGAGTATCACATAATTAAG+GGG - chr7_2:13878683-13878702 None:intergenic 25.0%
! GTTGAGTATCACATAATTAA+GGG - chr7_2:13878684-13878703 None:intergenic 25.0%
! AGTTGAGTATCACATAATTA+AGG - chr7_2:13878685-13878704 None:intergenic 25.0%
!!! GTTAGGATTTCAAACTTTTT+TGG - chr7_2:13878744-13878763 None:intergenic 25.0%
! AGTGAATGAAATCTTTAGTT+AGG - chr7_2:13878761-13878780 None:intergenic 25.0%
! TGACTAACATAACATACATT+GGG - chr7_2:13878900-13878919 None:intergenic 25.0%
! TTGACTAACATAACATACAT+TGG - chr7_2:13878901-13878920 None:intergenic 25.0%
!! TTAATACCAAGTTAACGTTT+TGG - chr7_2:13878930-13878949 None:intergenic 25.0%
! TATAATAACAAGGGGTTAAT+AGG + chr7_2:13879027-13879046 Msa1050020:intron 25.0%
! AAAAGTAACCTATATTACAG+GGG - chr7_2:13879060-13879079 None:intergenic 25.0%
! CAAAAGTAACCTATATTACA+GGG - chr7_2:13879061-13879080 None:intergenic 25.0%
! TCCAAAAAAAAAAATTACCG+GGG - chr7_2:13879091-13879110 None:intergenic 25.0%
!!! TTTTTTTTATGGAGTACACT+TGG + chr7_2:13879241-13879260 Msa1050020:intron 25.0%
! AGATGAATAACATGATACAA+TGG + chr7_2:13879742-13879761 Msa1050020:intron 25.0%
! GTATAACATGACTTATATAC+CGG - chr7_2:13879781-13879800 None:intergenic 25.0%
! ATCATGAAGAGTAGAATTAA+GGG - chr7_2:13879818-13879837 None:intergenic 25.0%
! GCGGAAAAATTAAAAAATTC+TGG - chr7_2:13880071-13880090 None:intergenic 25.0%
! TTCCGCTATTGAAAATAAAA+TGG + chr7_2:13880085-13880104 Msa1050020:intron 25.0%
!!! TCCAATTTTTTTTTTACAGG+GGG + chr7_2:13880546-13880565 Msa1050020:intron 25.0%
! CAAAAGTGACATATATTACA+GGG + chr7_2:13880575-13880594 Msa1050020:intron 25.0%
! AAAAGTGACATATATTACAG+GGG + chr7_2:13880576-13880595 Msa1050020:intron 25.0%
!!! TGTTTGTTATTAGGGTTAAT+AGG - chr7_2:13880609-13880628 None:intergenic 25.0%
!!! CATTGCAATGTTTGTTATTA+GGG - chr7_2:13880617-13880636 None:intergenic 25.0%
!! TGCATGTGTTAATTTAAGTT+AGG - chr7_2:13880984-13881003 None:intergenic 25.0%
!!! ATAAGGGTGTGTTAAATTTT+GGG - chr7_2:13881032-13881051 None:intergenic 25.0%
!!! AATAAGGGTGTGTTAAATTT+TGG - chr7_2:13881033-13881052 None:intergenic 25.0%
! GATGTAAGCAAGATAAATAA+GGG - chr7_2:13881048-13881067 None:intergenic 25.0%
! AGATGTAAGCAAGATAAATA+AGG - chr7_2:13881049-13881068 None:intergenic 25.0%
! TAAAATGCAAATCAGGATTA+AGG + chr7_2:13881214-13881233 Msa1050020:intron 25.0%
! TAATGTTCTGATTATTAGGA+AGG - chr7_2:13881399-13881418 None:intergenic 25.0%
! AGCATAATGTTCTGATTATT+AGG - chr7_2:13881403-13881422 None:intergenic 25.0%
! AATTAATTAGGATGGGAAAA+AGG - chr7_2:13881623-13881642 None:intergenic 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG - chr7_2:13881737-13881756 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG + chr7_2:13881854-13881873 Msa1050020:CDS 25.0%
!! TATTTTTCTAACTGGAACAT+AGG + chr7_2:13881969-13881988 Msa1050020:intron 25.0%
!! ATTTTTCTAACTGGAACATA+GGG + chr7_2:13881970-13881989 Msa1050020:intron 25.0%
! TCCATTTCATAAAATCACTT+GGG + chr7_2:13882088-13882107 Msa1050020:intron 25.0%
! AATTAAAGAATGCTTCCAAA+GGG - chr7_2:13882119-13882138 None:intergenic 25.0%
! AAATTAAAGAATGCTTCCAA+AGG - chr7_2:13882120-13882139 None:intergenic 25.0%
! TCAGAACAAAAGAAATTGAA+TGG - chr7_2:13882261-13882280 None:intergenic 25.0%
!! TTCTTTGTTATATAGTGCAA+TGG + chr7_2:13882284-13882303 Msa1050020:intron 25.0%
!! TCTTTGTTATATAGTGCAAT+GGG + chr7_2:13882285-13882304 Msa1050020:intron 25.0%
! TTCAGATAGTGAAATGTTTA+TGG + chr7_2:13882317-13882336 Msa1050020:intron 25.0%
!!! TAACAAGAAACATTTTAACG+AGG + chr7_2:13882447-13882466 Msa1050020:CDS 25.0%
! CTTATAAACCTTATAGTCAA+AGG + chr7_2:13882503-13882522 Msa1050020:intron 25.0%
! AACTATGACACAAATAAAAG+GGG - chr7_2:13882775-13882794 None:intergenic 25.0%
! GAACTATGACACAAATAAAA+GGG - chr7_2:13882776-13882795 None:intergenic 25.0%
! AGAACTATGACACAAATAAA+AGG - chr7_2:13882777-13882796 None:intergenic 25.0%
! TTCTATTCAAAATCAAGCAA+TGG + chr7_2:13882793-13882812 Msa1050020:CDS 25.0%
! AGAAGAATAAAAAAGAAGCA+AGG + chr7_2:13882822-13882841 Msa1050020:exon 25.0%
! AAAAAAGAAGCAAGGTAAAA+AGG + chr7_2:13882830-13882849 Msa1050020:intron 25.0%
! AAAAAGAAGCAAGGTAAAAA+GGG + chr7_2:13882831-13882850 Msa1050020:intron 25.0%
!!! TCTAATTTGTTCAACGATTA+AGG + chr7_2:13882946-13882965 Msa1050020:intron 25.0%
!! TAATATACATCAGCATTGAA+TGG + chr7_2:13883343-13883362 Msa1050020:three_prime_UTR 25.0%
! TGAAGATTATAGACAGAATA+TGG + chr7_2:13883577-13883596 Msa1050020:intron 25.0%
! TGATGAATGAATGTTGAATA+TGG + chr7_2:13883806-13883825 Msa1050020:intron 25.0%
! TGAATGTTGAATATGGTTAT+AGG + chr7_2:13883813-13883832 Msa1050020:intron 25.0%
! AGCAATTCCTAATAATATGT+TGG - chr7_2:13883946-13883965 Msa1050030:CDS 25.0%
! GTTAAAATGCTTCAAGAAAA+TGG - chr7_2:13884047-13884066 Msa1050030:CDS 25.0%
ATCTGTACTATCTATGAACA+TGG + chr7_2:13875960-13875979 Msa1050020:CDS 30.0%
ACTATCTATGAACATGGAAA+AGG + chr7_2:13875966-13875985 Msa1050020:CDS 30.0%
TATGAACATGGAAAAGGATT+AGG + chr7_2:13875972-13875991 Msa1050020:CDS 30.0%
ACTCCTTATGGTATAAAACA+AGG + chr7_2:13876000-13876019 Msa1050020:CDS 30.0%
CTCCTTATGGTATAAAACAA+GGG + chr7_2:13876001-13876020 Msa1050020:CDS 30.0%
! TTAATACCTTTTGCGTATGA+GGG - chr7_2:13876047-13876066 None:intergenic 30.0%
! ATTAATACCTTTTGCGTATG+AGG - chr7_2:13876048-13876067 None:intergenic 30.0%
!! TCATACGCAAAAGGTATTAA+TGG + chr7_2:13876047-13876066 Msa1050020:CDS 30.0%
! TCATCTTTTGGATGTTCAAT+CGG + chr7_2:13876590-13876609 Msa1050020:CDS 30.0%
GATATGCATGAATTACTTCA+AGG + chr7_2:13877203-13877222 Msa1050020:intron 30.0%
GCAGAAATGTGTAGAATAAA+AGG - chr7_2:13877306-13877325 None:intergenic 30.0%
TTGTACTACTGAAATTGTCA+AGG + chr7_2:13877419-13877438 Msa1050020:intron 30.0%
AATAGAAACACGTTGTAAAC+TGG - chr7_2:13877447-13877466 None:intergenic 30.0%
!!! GAATACAACACTTTTTCACT+AGG - chr7_2:13877545-13877564 None:intergenic 30.0%
! TCTCTTTTTCCATTTGGATT+CGG - chr7_2:13877617-13877636 None:intergenic 30.0%
GTATGGATATGTATAAAAGG+TGG - chr7_2:13877763-13877782 None:intergenic 30.0%
CGTAAATGATGCTTAAAAAG+TGG + chr7_2:13877826-13877845 Msa1050020:intron 30.0%
GATGCTTAAAAAGTGGAATA+TGG + chr7_2:13877833-13877852 Msa1050020:intron 30.0%
!!! TAACATGCGTAAGAGTATTT+TGG + chr7_2:13877937-13877956 Msa1050020:intron 30.0%
AAAAACGTTCAGTTCGATAA+AGG + chr7_2:13878045-13878064 Msa1050020:intron 30.0%
TCGATAAAGGTTTATCATGT+TGG + chr7_2:13878058-13878077 Msa1050020:intron 30.0%
TAAAGGTTTATCATGTTGGA+AGG + chr7_2:13878062-13878081 Msa1050020:intron 30.0%
TAATCAGTGCGATTTCTATA+TGG + chr7_2:13878709-13878728 Msa1050020:intron 30.0%
ACTAACATAACATACATTGG+GGG - chr7_2:13878898-13878917 None:intergenic 30.0%
GACTAACATAACATACATTG+GGG - chr7_2:13878899-13878918 None:intergenic 30.0%
! AACGTTAACTTGGTATTAAC+AGG + chr7_2:13878931-13878950 Msa1050020:intron 30.0%
CCAAAAGTAACCTATATTAC+AGG - chr7_2:13879062-13879081 None:intergenic 30.0%
!! CCTGTAATATAGGTTACTTT+TGG + chr7_2:13879059-13879078 Msa1050020:intron 30.0%
!!! TCCCCGGTAATTTTTTTTTT+TGG + chr7_2:13879087-13879106 Msa1050020:intron 30.0%
GATCATGAAGAGTAGAATTA+AGG - chr7_2:13879819-13879838 None:intergenic 30.0%
!!! TTTTTTTTATGGAGTACACG+TGG - chr7_2:13880397-13880416 None:intergenic 30.0%
!!! CCTGTAATATATGTCACTTT+TGG - chr7_2:13880577-13880596 None:intergenic 30.0%
CCAAAAGTGACATATATTAC+AGG + chr7_2:13880574-13880593 Msa1050020:intron 30.0%
AAAGTGACATATATTACAGG+GGG + chr7_2:13880577-13880596 Msa1050020:intron 30.0%
!! CCATTGCAATGTTTGTTATT+AGG - chr7_2:13880618-13880637 None:intergenic 30.0%
CCTAATAACAAACATTGCAA+TGG + chr7_2:13880615-13880634 Msa1050020:intron 30.0%
AAGAAGAGAAGTGAGAATAA+AGG - chr7_2:13880655-13880674 None:intergenic 30.0%
GCAAATTGTTTGTTTGATGA+AGG - chr7_2:13880682-13880701 None:intergenic 30.0%
TGGGTATTAACTTCGAAAAT+GGG - chr7_2:13880755-13880774 None:intergenic 30.0%
TTGGGTATTAACTTCGAAAA+TGG - chr7_2:13880756-13880775 None:intergenic 30.0%
TGAATTGAGTATGAATATGG+TGG + chr7_2:13880778-13880797 Msa1050020:intron 30.0%
GAATTGAGTATGAATATGGT+GGG + chr7_2:13880779-13880798 Msa1050020:intron 30.0%
AATTGAGTATGAATATGGTG+GGG + chr7_2:13880780-13880799 Msa1050020:intron 30.0%
TGGATAAAAGTAAATCAGGT+TGG - chr7_2:13881104-13881123 None:intergenic 30.0%
AGGTTGGATAAAAGTAAATC+AGG - chr7_2:13881108-13881127 None:intergenic 30.0%
AATATATCATGAAAGCAGGT+TGG - chr7_2:13881144-13881163 None:intergenic 30.0%
CTAGAATATATCATGAAAGC+AGG - chr7_2:13881148-13881167 None:intergenic 30.0%
! TTTCTCTCTTTTGTGTAAAC+AGG - chr7_2:13881246-13881265 None:intergenic 30.0%
TGTTTACACAAAAGAGAGAA+AGG + chr7_2:13881245-13881264 Msa1050020:intron 30.0%
! CATCTAAACTTTTATTCAGC+AGG + chr7_2:13881542-13881561 Msa1050020:intron 30.0%
! AAAAGGCTCTAACAACTTTA+TGG - chr7_2:13881606-13881625 None:intergenic 30.0%
TTGAACTCTCTGATTTCAAA+AGG - chr7_2:13881750-13881769 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG - chr7_2:13881820-13881839 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG + chr7_2:13881819-13881838 Msa1050020:CDS 30.0%
AAATTTCCCATCAAATCTGA+GGG - chr7_2:13881889-13881908 None:intergenic 30.0%
AAAATTTCCCATCAAATCTG+AGG - chr7_2:13881890-13881909 None:intergenic 30.0%
TTTGTATAACTCATCTGAAG+TGG - chr7_2:13881913-13881932 None:intergenic 30.0%
! TTTTTCTAACTGGAACATAG+GGG + chr7_2:13881971-13881990 Msa1050020:intron 30.0%
GTCCATTTCATAAAATCACT+TGG + chr7_2:13882087-13882106 Msa1050020:intron 30.0%
! ACCCAAGTGATTTTATGAAA+TGG - chr7_2:13882092-13882111 None:intergenic 30.0%
CTTACATAGGTATAGATTCA+AGG - chr7_2:13882152-13882171 None:intergenic 30.0%
! TTCTTGTTATCAGGTTTCAA+TGG - chr7_2:13882436-13882455 None:intergenic 30.0%
AGAAATTGCAGTTCTTTACA+TGG - chr7_2:13882607-13882626 None:intergenic 30.0%
! GGTTTTCATCTCAAATTGAT+CGG + chr7_2:13882744-13882763 Msa1050020:intron 30.0%
CAGAATGACAATGTAATTCA+TGG - chr7_2:13882879-13882898 None:intergenic 30.0%
TGTGAAAATATGAACTTAGG+TGG - chr7_2:13883058-13883077 None:intergenic 30.0%
CTGTGTGAAAATATGAACTT+AGG - chr7_2:13883061-13883080 None:intergenic 30.0%
GTTTGTATATTCTTAAGAGC+TGG + chr7_2:13883412-13883431 Msa1050020:three_prime_UTR 30.0%
ATGTTCCATTATATTCCTTG+AGG + chr7_2:13883452-13883471 Msa1050020:three_prime_UTR 30.0%
!! TTTTCTGCTCATATTTCTGA+AGG - chr7_2:13883635-13883654 Msa1050030:intron 30.0%
TTCAGAAATATGAGCAGAAA+AGG + chr7_2:13883634-13883653 Msa1050020:intron 30.0%
AAAAAACCATTGCTACAAAC+TGG + chr7_2:13883660-13883679 Msa1050020:intron 30.0%
ACCAAGAAAAATGAAAGACA+TGG + chr7_2:13883722-13883741 Msa1050020:intron 30.0%
!! ACCATGTCTTTCATTTTTCT+TGG - chr7_2:13883726-13883745 Msa1050030:intron 30.0%
TATGTTGGAAGAAATAAGCA+AGG - chr7_2:13883931-13883950 Msa1050030:CDS 30.0%
AAGAACAGAATCCAAAGAAA+TGG + chr7_2:13884242-13884261 Msa1050020:three_prime_UTR 30.0%
AGAACAGAATCCAAAGAAAT+GGG + chr7_2:13884243-13884262 Msa1050020:three_prime_UTR 30.0%
!!! TTTTTTCACTCCCATTTCTT+TGG - chr7_2:13884256-13884275 None:intergenic 30.0%
AATGGGAGTGAAAAAAGAAA+AGG + chr7_2:13884260-13884279 Msa1050020:three_prime_UTR 30.0%
ATGGGAGTGAAAAAAGAAAA+GGG + chr7_2:13884261-13884280 Msa1050020:three_prime_UTR 30.0%
ATTGCATGTCTTCACAAATA+AGG + chr7_2:13884355-13884374 Msa1050020:three_prime_UTR 30.0%
AGCCATTAACTGCAATTATC+TGG + chr7_2:13875695-13875714 Msa1050020:CDS 35.0%
GTCCAGATAATTGCAGTTAA+TGG - chr7_2:13875700-13875719 None:intergenic 35.0%
CAGGAAGTAAAGAGATATCA+CGG - chr7_2:13875803-13875822 None:intergenic 35.0%
! CTGTTGTTTGAAAAGCAAAC+TGG - chr7_2:13875842-13875861 None:intergenic 35.0%
!! GTTTGCTTTTCAAACAACAG+AGG + chr7_2:13875842-13875861 Msa1050020:CDS 35.0%
!!! TGCCCTTGTTTTATACCATA+AGG - chr7_2:13876006-13876025 None:intergenic 35.0%
!! TTATAGTGACATTTTGGGGA+AGG + chr7_2:13876106-13876125 Msa1050020:CDS 35.0%
TCTACCATCCAAGTTGTATA+CGG - chr7_2:13876234-13876253 None:intergenic 35.0%
TTACTTCAACTCCAATTGCT+CGG - chr7_2:13876490-13876509 None:intergenic 35.0%
GAAGTAAGAGACTCTACAAA+TGG + chr7_2:13876503-13876522 Msa1050020:CDS 35.0%
! AAGTCGTCCTCTTTTTCTTT+GGG - chr7_2:13876560-13876579 None:intergenic 35.0%
TTACCAATTCCCTGAATCAA+GGG - chr7_2:13876823-13876842 None:intergenic 35.0%
! AACAATGAAGTGTTCTACTC+TGG + chr7_2:13877097-13877116 Msa1050020:intron 35.0%
TGAATTACTTCAAGGTGATG+TGG + chr7_2:13877211-13877230 Msa1050020:intron 35.0%
ATGAGCTAATAACTCACCAA+TGG + chr7_2:13877505-13877524 Msa1050020:intron 35.0%
ATTCTTCAACATGTTACACG+AGG + chr7_2:13877561-13877580 Msa1050020:intron 35.0%
TTACACGAGGTTTCAATACT+TGG + chr7_2:13877574-13877593 Msa1050020:intron 35.0%
! CTCTTTTTCCATTTGGATTC+GGG - chr7_2:13877616-13877635 None:intergenic 35.0%
! GCACAAAGCATTTATTTGTG+TGG + chr7_2:13877734-13877753 Msa1050020:intron 35.0%
! GCTCTTATGAGTCTTTTGAT+TGG - chr7_2:13878010-13878029 None:intergenic 35.0%
TTTACCAAATCAGTTAGTGC+TGG - chr7_2:13878155-13878174 None:intergenic 35.0%
ATGCATCCAAAACGTTAACT+TGG + chr7_2:13878921-13878940 Msa1050020:intron 35.0%
ACCTATATTACAGGGGATAA+AGG - chr7_2:13879053-13879072 None:intergenic 35.0%
! ACTGTACATTTTTGCTGATG+TGG + chr7_2:13879162-13879181 Msa1050020:intron 35.0%
! CAATGGATATTGATTGACAC+CGG + chr7_2:13879759-13879778 Msa1050020:intron 35.0%
! ACTGTACATTTTTGCTGATG+TGG - chr7_2:13879162-13879181 None:intergenic 35.0%
!!! TTTGTTTTGGAAAACACCCT+AGG - chr7_2:13880506-13880525 None:intergenic 35.0%
GCCCCCTGTAAAAAAAAAAT+TGG - chr7_2:13880550-13880569 None:intergenic 35.0%
ACATATATTACAGGGGGTAA+AGG + chr7_2:13880583-13880602 Msa1050020:intron 35.0%
AGAGAAGTGAGAATAAAGGA+GGG - chr7_2:13880651-13880670 None:intergenic 35.0%
AAGAGAAGTGAGAATAAAGG+AGG - chr7_2:13880652-13880671 None:intergenic 35.0%
AAAATGGGAGAGGAGAAATT+GGG - chr7_2:13880740-13880759 None:intergenic 35.0%
ATTAACTTCGAAAATGGGAG+AGG - chr7_2:13880750-13880769 None:intergenic 35.0%
ATTGAGTATGAATATGGTGG+GGG + chr7_2:13880781-13880800 Msa1050020:intron 35.0%
ATCATACTCCAAGAATCAGA+AGG - chr7_2:13880847-13880866 None:intergenic 35.0%
! TAATTTAAGTTAGGCTTGCC+AGG - chr7_2:13880975-13880994 None:intergenic 35.0%
! TCTTTTGTGTAAACAGGTTC+AGG - chr7_2:13881240-13881259 None:intergenic 35.0%
AAAGAGAGAAAGGAAACCAA+AGG + chr7_2:13881255-13881274 Msa1050020:intron 35.0%
!!! CTCTTTGTTTTTGCTGCTAT+AGG - chr7_2:13881285-13881304 None:intergenic 35.0%
ATTGTGTTGAAACGACACAT+TGG + chr7_2:13881440-13881459 Msa1050020:intron 35.0%
!! GATAGACTTTTTGACTCTTC+CGG - chr7_2:13881490-13881509 None:intergenic 35.0%
! TTCACCAAAAGCATATGCAA+TGG + chr7_2:13881813-13881832 Msa1050020:CDS 35.0%
ATTCAACCCTCAGATTTGAT+GGG + chr7_2:13881880-13881899 Msa1050020:intron 35.0%
TTATATAGTGCAATGGGCAT+AGG + chr7_2:13882291-13882310 Msa1050020:intron 35.0%
AATGGTTTCCTTGAAACTGA+AGG - chr7_2:13882418-13882437 None:intergenic 35.0%
ATTCATGTTCAGTTGCTTCT+GGG + chr7_2:13882473-13882492 Msa1050020:CDS 35.0%
TTTGACACCCTTTGACTATA+AGG - chr7_2:13882514-13882533 None:intergenic 35.0%
GAAAATATGAACTTAGGTGG+AGG - chr7_2:13883055-13883074 None:intergenic 35.0%
ATATAGTCCGAGACAGATAT+GGG + chr7_2:13883092-13883111 Msa1050020:three_prime_UTR 35.0%
TGGGAAGAAAGAATGATTGT+AGG + chr7_2:13883111-13883130 Msa1050020:three_prime_UTR 35.0%
! TTATGCTCTAGATTTGAGTC+TGG + chr7_2:13883316-13883335 Msa1050020:three_prime_UTR 35.0%
CCTTTCCTCAAGGAATATAA+TGG - chr7_2:13883460-13883479 Msa1050030:CDS 35.0%
CCATTATATTCCTTGAGGAA+AGG + chr7_2:13883457-13883476 Msa1050020:three_prime_UTR 35.0%
TATTGCAGATACATTGCACT+TGG - chr7_2:13883490-13883509 Msa1050030:intron 35.0%
AGATTACCAGTTTGTAGCAA+TGG - chr7_2:13883669-13883688 Msa1050030:intron 35.0%
AACTTGATGTTTAATCCACC+AGG + chr7_2:13883852-13883871 Msa1050020:intron 35.0%
ACTTGATGTTTAATCCACCA+GGG + chr7_2:13883853-13883872 Msa1050020:intron 35.0%
!! TCCTAAAGTTGCTGATTCTT+GGG - chr7_2:13883907-13883926 Msa1050030:CDS 35.0%
!! ATCCTAAAGTTGCTGATTCT+TGG - chr7_2:13883908-13883927 Msa1050030:CDS 35.0%
TTTGTTAGGGACTGATATTG+AGG - chr7_2:13883976-13883995 Msa1050030:CDS 35.0%
ACTGTTTGATGCTGATGAAT+GGG - chr7_2:13884009-13884028 Msa1050030:CDS 35.0%
AACTGTTTGATGCTGATGAA+TGG - chr7_2:13884010-13884029 Msa1050030:CDS 35.0%
!! AGCATTTTAACGACGTTGTT+TGG + chr7_2:13884056-13884075 Msa1050020:three_prime_UTR 35.0%
!! ATTTTAACGACGTTGTTTGG+AGG + chr7_2:13884059-13884078 Msa1050020:three_prime_UTR 35.0%
TTCTTAAGTATGGCTTCATG+TGG - chr7_2:13884131-13884150 Msa1050030:CDS 35.0%
! GAAGCTTTGGTAGGGATTTA+AGG - chr7_2:13875653-13875672 None:intergenic 40.0%
! AATGGCTCTCAATTTTCGCA+AGG - chr7_2:13875682-13875701 None:intergenic 40.0%
GTTTGAAAAGCAAACTGGCA+CGG - chr7_2:13875837-13875856 None:intergenic 40.0%
ATTCCTCCTATTCGGAAATC+AGG + chr7_2:13875876-13875895 Msa1050020:CDS 40.0%
CATAAGCCTGATTTCCGAAT+AGG - chr7_2:13875885-13875904 None:intergenic 40.0%
!! CAGTCTTTAAGATCGAGCAA+CGG - chr7_2:13875933-13875952 None:intergenic 40.0%
GATTAGGCCAATACTCCTTA+TGG + chr7_2:13875988-13876007 Msa1050020:CDS 40.0%
!! TGGTATAAAACAAGGGCATC+CGG + chr7_2:13876008-13876027 Msa1050020:CDS 40.0%
CGGTTAACTGACGGTATAAA+AGG + chr7_2:13876194-13876213 Msa1050020:CDS 40.0%
TACCATCCAAGTTGTATACG+GGG - chr7_2:13876232-13876251 None:intergenic 40.0%
CTACCATCCAAGTTGTATAC+GGG - chr7_2:13876233-13876252 None:intergenic 40.0%
! TCCAACTTCAGCTCCATTTT+CGG - chr7_2:13876357-13876376 None:intergenic 40.0%
AAATGGAGCTGAAGTTGGAA+AGG + chr7_2:13876358-13876377 Msa1050020:CDS 40.0%
CTGAAGTTGGAAAGGATTGT+GGG + chr7_2:13876366-13876385 Msa1050020:CDS 40.0%
TGAAGTTGGAAAGGATTGTG+GGG + chr7_2:13876367-13876386 Msa1050020:CDS 40.0%
CTAAGTTCCAAGTCACATTC+AGG - chr7_2:13876398-13876417 None:intergenic 40.0%
! CTGAATGTGACTTGGAACTT+AGG + chr7_2:13876396-13876415 Msa1050020:CDS 40.0%
! ATGTGACTTGGAACTTAGGT+TGG + chr7_2:13876400-13876419 Msa1050020:CDS 40.0%
! TGTGACTTGGAACTTAGGTT+GGG + chr7_2:13876401-13876420 Msa1050020:CDS 40.0%
TATTCCCCCCAAAGAAAAAG+AGG + chr7_2:13876550-13876569 Msa1050020:CDS 40.0%
! AGTCGTCCTCTTTTTCTTTG+GGG - chr7_2:13876559-13876578 None:intergenic 40.0%
! GAAGTCGTCCTCTTTTTCTT+TGG - chr7_2:13876561-13876580 None:intergenic 40.0%
AGAAAAAGAGGACGACTTCA+AGG + chr7_2:13876562-13876581 Msa1050020:CDS 40.0%
TATCCCTTGATTCAGGGAAT+TGG + chr7_2:13876817-13876836 Msa1050020:intron 40.0%
GTTACCAATTCCCTGAATCA+AGG - chr7_2:13876824-13876843 None:intergenic 40.0%
ATGTTGCAAGTTGTGACATC+TGG + chr7_2:13877023-13877042 Msa1050020:intron 40.0%
CGAGGTTTCAATACTTGGTA+AGG + chr7_2:13877579-13877598 Msa1050020:intron 40.0%
TGTGCTGTCCATACTTCTAT+AGG - chr7_2:13877719-13877738 None:intergenic 40.0%
GATCTGTGTTGTCCATAGTA+TGG - chr7_2:13877780-13877799 None:intergenic 40.0%
TGGAAATGAGCAAAACCGTT+TGG + chr7_2:13877970-13877989 Msa1050020:intron 40.0%
GGAAATGAGCAAAACCGTTT+GGG + chr7_2:13877971-13877990 Msa1050020:intron 40.0%
GATTCTGCTCTTTACCCAAA+CGG - chr7_2:13877988-13878007 None:intergenic 40.0%
TACACCAGCACTAACTGATT+TGG + chr7_2:13878148-13878167 Msa1050020:intron 40.0%
!! CACTTTTAGGGACTCAAATG+AGG - chr7_2:13878826-13878845 None:intergenic 40.0%
! GATAGCGAGTGACACTTTTA+GGG - chr7_2:13878838-13878857 None:intergenic 40.0%
!! TGATAGCGAGTGACACTTTT+AGG - chr7_2:13878839-13878858 None:intergenic 40.0%
GCCTTTATCCCCTGTAATAT+AGG + chr7_2:13879049-13879068 Msa1050020:intron 40.0%
!!! GTTACTTTTGGTTTTGTCCC+CGG + chr7_2:13879071-13879090 Msa1050020:intron 40.0%
AGCAAAAATGTACAGTCAGC+TGG - chr7_2:13880480-13880499 None:intergenic 40.0%
AGCAAAAATGTACAGTCAGC+TGG + chr7_2:13880480-13880499 Msa1050020:intron 40.0%
GAGAAATTGGGGGCAAAAAT+GGG - chr7_2:13880728-13880747 None:intergenic 40.0%
AAATGGGAGAGGAGAAATTG+GGG - chr7_2:13880739-13880758 None:intergenic 40.0%
GAAAATGGGAGAGGAGAAAT+TGG - chr7_2:13880741-13880760 None:intergenic 40.0%
GGTGATGCACATAAACACTA+TGG + chr7_2:13880807-13880826 Msa1050020:intron 40.0%
GCAAATCTCCTTCTGATTCT+TGG + chr7_2:13880836-13880855 Msa1050020:intron 40.0%
!!! TTGTAGTGGCTTGCTTTTGT+TGG + chr7_2:13881651-13881670 Msa1050020:intron 40.0%
GCATATGCAATGGAAATGGA+AGG + chr7_2:13881823-13881842 Msa1050020:CDS 40.0%
CATTCAACCCTCAGATTTGA+TGG + chr7_2:13881879-13881898 Msa1050020:intron 40.0%
ATCACTTGGGTAAAACCCTT+TGG + chr7_2:13882101-13882120 Msa1050020:intron 40.0%
TGAAGTCTCCTTCAGTTTCA+AGG + chr7_2:13882407-13882426 Msa1050020:CDS 40.0%
GATTCATGTTCAGTTGCTTC+TGG + chr7_2:13882472-13882491 Msa1050020:CDS 40.0%
TGCAGTTCTTTACATGGTCA+CGG - chr7_2:13882601-13882620 None:intergenic 40.0%
TGTGATGTCGTTCAAATCCA+GGG + chr7_2:13882626-13882645 Msa1050020:intron 40.0%
TGAACGTGCACAAAGAAGAA+AGG + chr7_2:13882683-13882702 Msa1050020:CDS 40.0%
AAGAAGCCATCAAACAGTTG+AGG + chr7_2:13882978-13882997 Msa1050020:three_prime_UTR 40.0%
ACTTCTCCTCAACTGTTTGA+TGG - chr7_2:13882987-13883006 None:intergenic 40.0%
! TATGCCAAGCTTTTACCATG+AGG + chr7_2:13883027-13883046 Msa1050020:three_prime_UTR 40.0%
! ATGCCAAGCTTTTACCATGA+GGG + chr7_2:13883028-13883047 Msa1050020:three_prime_UTR 40.0%
CATATAGTCCGAGACAGATA+TGG + chr7_2:13883091-13883110 Msa1050020:three_prime_UTR 40.0%
CTTTCTTCCCATATCTGTCT+CGG - chr7_2:13883102-13883121 None:intergenic 40.0%
! ATCAGCATTGAATGGAACTG+TGG + chr7_2:13883351-13883370 Msa1050020:three_prime_UTR 40.0%
CAAACATCTCTCAACAATGC+AGG - chr7_2:13883397-13883416 Msa1050030:CDS 40.0%
! CTCATATTTCTGAAGGCTTC+AGG - chr7_2:13883628-13883647 Msa1050030:intron 40.0%
! GGTAAAAGCACAGTGAGTAA+AGG + chr7_2:13883743-13883762 Msa1050020:intron 40.0%
ACCCAAGAATCAGCAACTTT+AGG + chr7_2:13883903-13883922 Msa1050020:three_prime_UTR 40.0%
!! GGGTTATGACAGCTTTGTTA+GGG - chr7_2:13883989-13884008 Msa1050030:CDS 40.0%
!! TGGGTTATGACAGCTTTGTT+AGG - chr7_2:13883990-13884009 Msa1050030:CDS 40.0%
TTATGGAGTTGGAGTCAAGT+GGG - chr7_2:13884108-13884127 Msa1050030:CDS 40.0%
AGTATGGCTTCATGTGGTTA+TGG - chr7_2:13884125-13884144 Msa1050030:CDS 40.0%
AAAAGGGAACGTGTGATTCA+AGG + chr7_2:13884277-13884296 Msa1050020:three_prime_UTR 40.0%
! CTCAATTTTCGCAAGGATGC+AGG - chr7_2:13875675-13875694 None:intergenic 45.0%
AAGCCTGATTTCCGAATAGG+AGG - chr7_2:13875882-13875901 None:intergenic 45.0%
!! GGTATAAAACAAGGGCATCC+GGG + chr7_2:13876009-13876028 Msa1050020:CDS 45.0%
AATGCTCCCTCATACGCAAA+AGG + chr7_2:13876038-13876057 Msa1050020:CDS 45.0%
!! TAGTGACATTTTGGGGAAGG+AGG + chr7_2:13876109-13876128 Msa1050020:CDS 45.0%
!! AGTGACATTTTGGGGAAGGA+GGG + chr7_2:13876110-13876129 Msa1050020:CDS 45.0%
TTATACCGTCAGTTAACCGC+TGG - chr7_2:13876193-13876212 None:intergenic 45.0%
ACTGACGGTATAAAAGGCTG+TGG + chr7_2:13876200-13876219 Msa1050020:CDS 45.0%
CTGACGGTATAAAAGGCTGT+GGG + chr7_2:13876201-13876220 Msa1050020:CDS 45.0%
TGACGGTATAAAAGGCTGTG+GGG + chr7_2:13876202-13876221 Msa1050020:CDS 45.0%
ATCCCCGTATACAACTTGGA+TGG + chr7_2:13876227-13876246 Msa1050020:CDS 45.0%
! CAACTTCAGCTCCATTTTCG+GGG - chr7_2:13876355-13876374 None:intergenic 45.0%
! CCAACTTCAGCTCCATTTTC+GGG - chr7_2:13876356-13876375 None:intergenic 45.0%
GCTGAAGTTGGAAAGGATTG+TGG + chr7_2:13876365-13876384 Msa1050020:CDS 45.0%
GGTCTTTCCTGAATGTGACT+TGG + chr7_2:13876388-13876407 Msa1050020:CDS 45.0%
! GTGACTTGGAACTTAGGTTG+GGG + chr7_2:13876402-13876421 Msa1050020:CDS 45.0%
TGGGGGGAATAAGAAGTTGT+TGG - chr7_2:13876541-13876560 None:intergenic 45.0%
! TCGTCCTCTTTTTCTTTGGG+GGG - chr7_2:13876557-13876576 None:intergenic 45.0%
! GTCGTCCTCTTTTTCTTTGG+GGG - chr7_2:13876558-13876577 None:intergenic 45.0%
!!! GACGTTTTGACTCTTCGATC+AGG - chr7_2:13876737-13876756 None:intergenic 45.0%
CTCTCTGTGTGTCAAGCAAA+AGG + chr7_2:13876762-13876781 Msa1050020:intron 45.0%
TGAGCAGTATCCCTTGATTC+AGG + chr7_2:13876810-13876829 Msa1050020:intron 45.0%
GAGCAGTATCCCTTGATTCA+GGG + chr7_2:13876811-13876830 Msa1050020:intron 45.0%
GTAGTCAACCCGAATCCAAA+TGG + chr7_2:13877605-13877624 Msa1050020:intron 45.0%
TTAACTCACGTAACTCACGC+TGG - chr7_2:13877869-13877888 None:intergenic 45.0%
AGCTGAAGTGGTGAGTCTAA+CGG - chr7_2:13878968-13878987 None:intergenic 45.0%
CAATTAAGTCCCTGCCATCA+TGG - chr7_2:13879005-13879024 None:intergenic 45.0%
!!! TTGTTTTGGAAAACCCCCCT+AGG + chr7_2:13879132-13879151 Msa1050020:intron 45.0%
!!! GTCACCTTTTTCAGATGACG+TGG + chr7_2:13879193-13879212 Msa1050020:intron 45.0%
TGGGGGCAAAAATGGGATTT+GGG - chr7_2:13880721-13880740 None:intergenic 45.0%
TTGGGGGCAAAAATGGGATT+TGG - chr7_2:13880722-13880741 None:intergenic 45.0%
GGAGAAATTGGGGGCAAAAA+TGG - chr7_2:13880729-13880748 None:intergenic 45.0%
AATGGGAGAGGAGAAATTGG+GGG - chr7_2:13880738-13880757 None:intergenic 45.0%
! AGTATGAATATGGTGGGGGT+GGG + chr7_2:13880785-13880804 Msa1050020:intron 45.0%
CTTGGAGTATGATGCCAATC+AGG + chr7_2:13880854-13880873 Msa1050020:intron 45.0%
! TGCCAATCAGGAGCATGATT+TGG + chr7_2:13880866-13880885 Msa1050020:intron 45.0%
! GCCAATCAGGAGCATGATTT+GGG + chr7_2:13880867-13880886 Msa1050020:intron 45.0%
! CCAATCAGGAGCATGATTTG+GGG + chr7_2:13880868-13880887 Msa1050020:intron 45.0%
! CAGGCTAATTTGTGACAGGT+TGG - chr7_2:13880956-13880975 None:intergenic 45.0%
CAACCTGTCACAAATTAGCC+TGG + chr7_2:13880954-13880973 Msa1050020:intron 45.0%
! TTGCCAGGCTAATTTGTGAC+AGG - chr7_2:13880960-13880979 None:intergenic 45.0%
TGCTGCTATAGGATAGCCTT+TGG - chr7_2:13881274-13881293 None:intergenic 45.0%
TAGCCTGCCATGATAAGCAA+AGG + chr7_2:13881305-13881324 Msa1050020:intron 45.0%
AGCCTGCCATGATAAGCAAA+GGG + chr7_2:13881306-13881325 Msa1050020:intron 45.0%
!! TCTTTTGTTGAAGCACCTGC+CGG + chr7_2:13881468-13881487 Msa1050020:intron 45.0%
TGAAGGAGACTTCAACTGCA+AGG - chr7_2:13882401-13882420 None:intergenic 45.0%
CTGTGATGTCGTTCAAATCC+AGG + chr7_2:13882625-13882644 Msa1050020:intron 45.0%
! TTGCTTCTGCTCCAAGCTTT+TGG + chr7_2:13882655-13882674 Msa1050020:CDS 45.0%
ACGTGCACAAAGAAGAAAGG+AGG + chr7_2:13882686-13882705 Msa1050020:CDS 45.0%
! TGCCAAGCTTTTACCATGAG+GGG + chr7_2:13883029-13883048 Msa1050020:three_prime_UTR 45.0%
TCTCTCAACAATGCAGGACT+TGG - chr7_2:13883391-13883410 Msa1050030:CDS 45.0%
TGGCAATGAACCTTTCCTCA+AGG - chr7_2:13883470-13883489 Msa1050030:CDS 45.0%
TATGGAGTTGGAGTCAAGTG+GGG - chr7_2:13884107-13884126 Msa1050030:CDS 45.0%
GTTATGGAGTTGGAGTCAAG+TGG - chr7_2:13884109-13884128 Msa1050030:CDS 45.0%
GCTTCATGTGGTTATGGAGT+TGG - chr7_2:13884119-13884138 Msa1050030:CDS 45.0%
!! TAAAAAAATGAAAATAATTA+TGG + chr7_2:13879351-13879370 Msa1050020:intron 5.0%
!! TTAAAAAAATGAAAAAATTA+TGG + chr7_2:13879570-13879589 Msa1050020:intron 5.0%
!! AAATTTAATAAAATAAAATC+TGG - chr7_2:13880162-13880181 None:intergenic 5.0%
!! TAAAAAAATGAAAATAATTA+TGG - chr7_2:13879351-13879370 None:intergenic 5.0%
! GGATGCAGGAAGCTTTGGTA+GGG - chr7_2:13875661-13875680 None:intergenic 50.0%
! AGGATGCAGGAAGCTTTGGT+AGG - chr7_2:13875662-13875681 None:intergenic 50.0%
AGCAAACTGGCACGGAACTT+GGG - chr7_2:13875829-13875848 None:intergenic 50.0%
AAGCAAACTGGCACGGAACT+TGG - chr7_2:13875830-13875849 None:intergenic 50.0%
!! GTGACATTTTGGGGAAGGAG+GGG + chr7_2:13876111-13876130 Msa1050020:CDS 50.0%
AAGGAGGGGAATGAAAGTGG+AGG + chr7_2:13876125-13876144 Msa1050020:CDS 50.0%
TTGATGCTTACCAAGGCCAG+CGG + chr7_2:13876174-13876193 Msa1050020:CDS 50.0%
GGTCATCCCCGTATACAACT+TGG + chr7_2:13876223-13876242 Msa1050020:CDS 50.0%
GAGTCACAACACCCCGAAAA+TGG + chr7_2:13876341-13876360 Msa1050020:CDS 50.0%
CCCGAAAATGGAGCTGAAGT+TGG + chr7_2:13876353-13876372 Msa1050020:CDS 50.0%
!! TTGGAACTTAGGTTGGGGCT+GGG + chr7_2:13876407-13876426 Msa1050020:CDS 50.0%
GAGCTACAACACCGAGCAAT+TGG + chr7_2:13876476-13876495 Msa1050020:CDS 50.0%
!! GGAGCGTTGAAACTGTCCAT+TGG - chr7_2:13877524-13877543 None:intergenic 50.0%
CTCGCTATCAGATCAGTCAC+TGG + chr7_2:13878849-13878868 Msa1050020:intron 50.0%
CACCACTTCAGCTGCATTGT+TGG + chr7_2:13878975-13878994 Msa1050020:intron 50.0%
!! GCATTGTTGGCCTTCCATGA+TGG + chr7_2:13878988-13879007 Msa1050020:intron 50.0%
TAAGTCCCTGCCATCATGGA+AGG - chr7_2:13879001-13879020 None:intergenic 50.0%
! ATGTACAGTCAGCTGGCCTA+GGG - chr7_2:13880487-13880506 None:intergenic 50.0%
! AATGTACAGTCAGCTGGCCT+AGG - chr7_2:13880486-13880505 None:intergenic 50.0%
TGCGTCACGTCATCCGAAAA+AGG + chr7_2:13880438-13880457 Msa1050020:intron 50.0%
! GCATGCTGCGTCACCTTTTT+CGG - chr7_2:13879184-13879203 None:intergenic 50.0%
! AATGTACAGTCAGCTGGCCT+AGG + chr7_2:13880486-13880505 Msa1050020:intron 50.0%
! ATGTACAGTCAGCTGGCCTA+GGG + chr7_2:13880487-13880506 Msa1050020:intron 50.0%
! GAGTATGAATATGGTGGGGG+TGG + chr7_2:13880784-13880803 Msa1050020:intron 50.0%
! GTATGAATATGGTGGGGGTG+GGG + chr7_2:13880786-13880805 Msa1050020:intron 50.0%
CCCCAAATCATGCTCCTGAT+TGG - chr7_2:13880871-13880890 None:intergenic 50.0%
GTCGGTCATGACTCAAAGGT+GGG - chr7_2:13880920-13880939 None:intergenic 50.0%
AGCCCTTTGCTTATCATGGC+AGG - chr7_2:13881311-13881330 None:intergenic 50.0%
GTGCAGCCCTTTGCTTATCA+TGG - chr7_2:13881315-13881334 None:intergenic 50.0%
!! GACTTTTTGACTCTTCCGGC+AGG - chr7_2:13881486-13881505 None:intergenic 50.0%
CGTTCAGCTGACCAAAAGCT+TGG - chr7_2:13882669-13882688 None:intergenic 50.0%
CGACGTTGTTTGGAGGAAGT+TGG + chr7_2:13884066-13884085 Msa1050020:three_prime_UTR 50.0%
!! GTTTGGAGGAAGTTGGTGAG+TGG + chr7_2:13884073-13884092 Msa1050020:three_prime_UTR 50.0%
CGCAAGGATGCAGGAAGCTT+TGG - chr7_2:13875666-13875685 None:intergenic 55.0%
GCTTGAGAACTACGACGTGC+AGG + chr7_2:13875743-13875762 Msa1050020:CDS 55.0%
TGGCACGGAACTTGGGATTC+AGG - chr7_2:13875822-13875841 None:intergenic 55.0%
!! TGAGGGAGCATTAGTGCACC+CGG - chr7_2:13876030-13876049 None:intergenic 55.0%
GGGAAGGAGGGGAATGAAAG+TGG + chr7_2:13876122-13876141 Msa1050020:CDS 55.0%
CAAGGCCAGCGGTTAACTGA+CGG + chr7_2:13876185-13876204 Msa1050020:CDS 55.0%
!! CTTGGAACTTAGGTTGGGGC+TGG + chr7_2:13876406-13876425 Msa1050020:CDS 55.0%
GGCCAACAATGCAGCTGAAG+TGG - chr7_2:13878980-13878999 None:intergenic 55.0%
!! TGTTGGCCTTCCATGATGGC+AGG + chr7_2:13878992-13879011 Msa1050020:intron 55.0%
!! GTTGGCCTTCCATGATGGCA+GGG + chr7_2:13878993-13879012 Msa1050020:intron 55.0%
! TGTACAGTCAGCTGGCCTAG+GGG - chr7_2:13880488-13880507 None:intergenic 55.0%
CGCGCCACGTCATCTGAAAA+AGG - chr7_2:13879200-13879219 None:intergenic 55.0%
CGTCGGTCATGACTCAAAGG+TGG - chr7_2:13880921-13880940 None:intergenic 55.0%
! GTGCGTCGGTCATGACTCAA+AGG - chr7_2:13880924-13880943 None:intergenic 55.0%
TTGAGTCATGACCGACGCAC+AGG + chr7_2:13880924-13880943 Msa1050020:intron 55.0%
GGCCCCTCATGGTAAAAGCT+TGG - chr7_2:13883034-13883053 None:intergenic 55.0%
TCCACCAGGGTACAAGTAGC+TGG + chr7_2:13883866-13883885 Msa1050020:three_prime_UTR 55.0%
ACCAGCTACTTGTACCCTGG+TGG - chr7_2:13883870-13883889 Msa1050030:CDS 55.0%
GTCACCAGCTACTTGTACCC+TGG - chr7_2:13883873-13883892 Msa1050030:CDS 55.0%
!! AGGAAGTTGGTGAGTGGCCA+TGG + chr7_2:13884079-13884098 Msa1050020:three_prime_UTR 55.0%
TGGAGTCAAGTGGGGAACCA+TGG - chr7_2:13884099-13884118 Msa1050030:CDS 55.0%
! CGTCAGTTAACCGCTGGCCT+TGG - chr7_2:13876187-13876206 None:intergenic 60.0%
!! GAACTTAGGTTGGGGCTGGG+CGG + chr7_2:13876410-13876429 Msa1050020:CDS 60.0%
! TACAGTCAGCTGGCCTAGGG+GGG - chr7_2:13880490-13880509 None:intergenic 60.0%
! GTACAGTCAGCTGGCCTAGG+GGG - chr7_2:13880489-13880508 None:intergenic 60.0%
! GTTGGCGTTAGCCTGTGCGT+CGG - chr7_2:13880938-13880957 None:intergenic 60.0%
AGCAGAAGCAACAGTCGCCC+TGG - chr7_2:13882646-13882665 None:intergenic 60.0%
ACTTAGGTGGAGGCCCCTCA+TGG - chr7_2:13883045-13883064 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 13875615 13884453 13875615 ID=Msa1050020;Name=Msa1050020
chr7_2 mRNA 13875615 13884453 13875615 ID=Msa1050020-mRNA-1;Parent=Msa1050020;Name=Msa1050020-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.57|0.5|0.87|0.57|0.5|8|987|444
chr7_2 exon 13875615 13876611 13875615 ID=Msa1050020-mRNA-1:exon:3413;Parent=Msa1050020-mRNA-1
chr7_2 exon 13881761 13881875 13881761 ID=Msa1050020-mRNA-1:exon:3414;Parent=Msa1050020-mRNA-1
chr7_2 exon 13882363 13882494 13882363 ID=Msa1050020-mRNA-1:exon:3415;Parent=Msa1050020-mRNA-1
chr7_2 exon 13882647 13882707 13882647 ID=Msa1050020-mRNA-1:exon:3416;Parent=Msa1050020-mRNA-1
chr7_2 exon 13882793 13882843 13882793 ID=Msa1050020-mRNA-1:exon:3417;Parent=Msa1050020-mRNA-1
chr7_2 exon 13882968 13883146 13882968 ID=Msa1050020-mRNA-1:exon:3418;Parent=Msa1050020-mRNA-1
chr7_2 exon 13883314 13883504 13883314 ID=Msa1050020-mRNA-1:exon:3419;Parent=Msa1050020-mRNA-1
chr7_2 exon 13883858 13884453 13883858 ID=Msa1050020-mRNA-1:exon:3420;Parent=Msa1050020-mRNA-1
chr7_2 CDS 13875615 13876611 13875615 ID=Msa1050020-mRNA-1:cds;Parent=Msa1050020-mRNA-1
chr7_2 CDS 13881761 13881875 13881761 ID=Msa1050020-mRNA-1:cds;Parent=Msa1050020-mRNA-1
chr7_2 CDS 13882363 13882494 13882363 ID=Msa1050020-mRNA-1:cds;Parent=Msa1050020-mRNA-1
chr7_2 CDS 13882647 13882707 13882647 ID=Msa1050020-mRNA-1:cds;Parent=Msa1050020-mRNA-1
chr7_2 CDS 13882793 13882822 13882793 ID=Msa1050020-mRNA-1:cds;Parent=Msa1050020-mRNA-1
chr7_2 three_prime_UTR 13882823 13882843 13882823 ID=Msa1050020-mRNA-1:three_prime_utr;Parent=Msa1050020-mRNA-1
chr7_2 three_prime_UTR 13882968 13883146 13882968 ID=Msa1050020-mRNA-1:three_prime_utr;Parent=Msa1050020-mRNA-1
chr7_2 three_prime_UTR 13883314 13883504 13883314 ID=Msa1050020-mRNA-1:three_prime_utr;Parent=Msa1050020-mRNA-1
chr7_2 three_prime_UTR 13883858 13884453 13883858 ID=Msa1050020-mRNA-1:three_prime_utr;Parent=Msa1050020-mRNA-1
Gene Sequence

>Msa1050020

ATGTTGGAAAAGCTTAATTTAGATGAATGCATAAACCTTAAATCCCTACCAAAGCTTCCTGCATCCTTGCGAAAATTGAGAGCCATTAACTGCAATTATCTGGACACTAACTCAATTCAAAGAGAAATGCTTGAGAACTACGACGTGCAGGTGCATAGATTAGATAATCTCGATGCACTCTCTTTCCGTGATATCTCTTTACTTCCTGAATCCCAAGTTCCGTGCCAGTTTGCTTTTCAAACAACAGAGGCTTCAATTAATATTCCTCCTATTCGGAAATCAGGCTTATGTTGTTTCGTTTTATGCATCATTCTACCGTTGCTCGATCTTAAAGACTGCAACTTTATCTGTACTATCTATGAACATGGAAAAGGATTAGGCCAATACTCCTTATGGTATAAAACAAGGGCATCCGGGTGCACTAATGCTCCCTCATACGCAAAAGGTATTAATGGAATATTAAATTCAGATCATGTAATGTTAGGCTTCTTTTATAGTGACATTTTGGGGAAGGAGGGGAATGAAAGTGGAGGTGATCATTACAACCTTTCATTTAAATTTGATGCTTACCAAGGCCAGCGGTTAACTGACGGTATAAAAGGCTGTGGGGTCATCCCCGTATACAACTTGGATGGTAGAAGAAGTAACAGTGTTGAAATTGTTGAATTAGCATCATGTGATCAAGTCTCTGATGAGTCTGATCAACATTCGAAATTTGACATTGACGAGTCACAACACCCCGAAAATGGAGCTGAAGTTGGAAAGGATTGTGGGGTCTTTCCTGAATGTGACTTGGAACTTAGGTTGGGGCTGGGCGGTAGAAGAAGTAGTAGAGATGAGCATTTGAAATTTGATATTGCTGAGCTACAACACCGAGCAATTGGAGTTGAAGTAAGAGACTCTACAAATGGAAATGAAGATGACCAACAACTTCTTATTCCCCCCAAAGAAAAAGAGGACGACTTCAAGGATAAATCATCTTTTGGATGTTCAATCGAGAGTTCAAAATCAGATGCAGCTTCTAGCTATGAGCAAAGAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGAGTTAGTTTCGAAACTTTTGTTTTGACTGTTTGTGCCTTGCAGTTGAAGTCTCCTTCAGTTTCAAGGAAACCATTGAAACCTGATAACAAGAAACATTTTAACGAGGACGATTCATGTTCAGTTGCTTCTGGGGCGACTGTTGCTTCTGCTCCAAGCTTTTGGTCAGCTGAACGTGCACAAAGAAGAAAGGAGTTCTATTCAAAATCAAGCAATGGAAGCTGA
Protein sequence

>Msa1050020

MLEKLNLDECINLKSLPKLPASLRKLRAINCNYLDTNSIQREMLENYDVQVHRLDNLDALSFRDISLLPESQVPCQFAFQTTEASINIPPIRKSGLCCFVLCIILPLLDLKDCNFICTIYEHGKGLGQYSLWYKTRASGCTNAPSYAKGINGILNSDHVMLGFFYSDILGKEGNESGGDHYNLSFKFDAYQGQRLTDGIKGCGVIPVYNLDGRRSNSVEIVELASCDQVSDESDQHSKFDIDESQHPENGAEVGKDCGVFPECDLELRLGLGGRRSSRDEHLKFDIAELQHRAIGVEVRDSTNGNEDDQQLLIPPKEKEDDFKDKSSFGCSIESSKSDAASSYEQRTSSISPKAYAMEMEGSCNKEFFIDRVSFETFVLTVCALQLKSPSVSRKPLKPDNKKHFNEDDSCSVASGATVASAPSFWSAERAQRRKEFYSKSSNGS*