AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0674560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0674560 MtrunA17_Chr4g0017401 100.000 259 0 0 1 259 1 259 0.0 516
Msa0674560 MtrunA17_Chr3g0144311 52.489 221 84 5 6 222 19 222 2.74e-59 190
Msa0674560 MtrunA17_Chr8g0346011 47.104 259 102 10 5 258 26 254 4.83e-59 189
Msa0674560 MtrunA17_Chr5g0426311 76.471 85 20 0 9 93 9 93 2.29e-44 151
Msa0674560 MtrunA17_Chr3g0127751 47.727 176 66 5 11 182 21 174 4.20e-42 144
Msa0674560 MtrunA17_Chr7g0276531 68.539 89 28 0 9 97 11 99 5.06e-41 142
Msa0674560 MtrunA17_Chr3g0101061 44.444 81 44 1 4 84 28 107 1.70e-20 90.9
Msa0674560 MtrunA17_Chr4g0045921 50.602 83 41 0 12 94 72 154 1.21e-18 84.3
Msa0674560 MtrunA17_Chr8g0360551 46.988 83 44 0 12 94 69 151 1.70e-18 84.7
Msa0674560 MtrunA17_Chr2g0290191 42.647 68 38 1 17 84 5 71 5.12e-18 83.2
Msa0674560 MtrunA17_Chr7g0255011 41.667 84 49 0 11 94 122 205 3.70e-16 77.8
Msa0674560 MtrunA17_Chr4g0035051 43.902 82 42 3 12 91 5 84 1.11e-15 71.6
Msa0674560 MtrunA17_Chr5g0447761 41.333 75 43 1 17 91 7 80 1.34e-15 76.3
Msa0674560 MtrunA17_Chr4g0035001 43.902 82 42 3 12 91 3 82 3.87e-15 71.2
Msa0674560 MtrunA17_Chr1g0186351 36.250 80 50 1 12 91 2 80 3.94e-15 74.7
Msa0674560 MtrunA17_Chr4g0035031 45.122 82 41 3 12 91 5 84 4.45e-15 71.6
Msa0674560 MtrunA17_Chr5g0440831 39.759 83 50 0 12 94 161 243 5.20e-15 74.7
Msa0674560 MtrunA17_Chr4g0050781 46.479 71 37 1 12 82 3 72 6.23e-15 72.0
Msa0674560 MtrunA17_Chr2g0278661 45.070 71 38 1 12 82 3 72 6.74e-15 72.4
Msa0674560 MtrunA17_Chr3g0086861 37.647 85 50 2 10 92 38 121 4.87e-14 71.6
Msa0674560 MtrunA17_Chr4g0031091 45.070 71 38 1 16 85 33 103 1.96e-13 65.5
Msa0674560 MtrunA17_Chr7g0266751 39.759 83 49 1 17 98 33 115 2.45e-13 65.9
Msa0674560 MtrunA17_Chr4g0061451 37.975 79 46 2 16 92 42 119 5.23e-13 67.4
Msa0674560 MtrunA17_Chr7g0219021 34.483 87 49 3 17 100 41 122 9.24e-13 66.6
Msa0674560 MtrunA17_Chr3g0119311 38.462 78 45 2 16 91 36 112 1.37e-12 63.5
Msa0674560 MtrunA17_Chr3g0121631 37.681 69 43 0 16 84 36 104 2.10e-12 63.5
Msa0674560 MtrunA17_Chr1g0210241 31.522 92 54 2 16 107 7 89 1.37e-11 63.5
Msa0674560 MtrunA17_Chr3g0135111 37.333 75 47 0 17 91 118 192 1.83e-11 63.5
Msa0674560 MtrunA17_Chr3g0120721 35.616 73 46 1 17 89 19 90 7.14e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0674560 AT1G33470.2 58.527 258 89 8 12 267 3 244 7.25e-94 277
Msa0674560 AT1G33470.1 58.301 259 89 9 12 267 3 245 5.90e-92 272
Msa0674560 AT1G33470.3 59.363 251 83 9 12 259 3 237 7.73e-92 271
Msa0674560 AT1G22910.2 68.362 177 44 5 10 180 7 177 1.09e-73 226
Msa0674560 AT1G22910.1 68.362 177 44 5 10 180 7 177 3.04e-73 224
Msa0674560 AT1G22910.3 68.362 177 44 5 10 180 7 177 4.95e-73 227
Msa0674560 AT1G20880.2 52.655 226 78 11 6 220 14 221 2.70e-53 174
Msa0674560 AT1G20880.3 52.655 226 78 11 6 220 14 221 2.70e-53 174
Msa0674560 AT1G20880.1 52.655 226 78 11 6 220 14 221 2.70e-53 174
Msa0674560 AT1G76460.1 49.115 226 90 8 6 222 14 223 3.10e-52 172
Msa0674560 AT2G46780.1 50.254 197 58 6 12 185 18 197 4.86e-52 173
Msa0674560 AT2G46780.2 50.254 197 58 6 12 185 18 197 4.86e-52 173
Msa0674560 AT1G22330.1 63.248 117 40 2 10 125 11 125 8.00e-46 155
Msa0674560 AT1G78260.1 76.190 84 20 0 10 93 11 94 9.58e-43 147
Msa0674560 AT1G78260.2 76.190 84 20 0 10 93 11 94 2.04e-42 146
Msa0674560 AT3G54770.3 64.356 101 36 0 2 102 3 103 9.12e-40 139
Msa0674560 AT3G54770.1 64.356 101 36 0 2 102 3 103 1.05e-39 139
Msa0674560 AT1G22910.4 58.400 125 40 5 62 180 8 126 1.41e-34 124
Msa0674560 AT5G11412.1 55.682 88 39 0 7 94 43 130 1.53e-31 115
Msa0674560 AT5G53680.1 49.474 95 44 1 12 102 9 103 9.43e-28 105
Msa0674560 AT3G06970.1 50.575 87 43 0 12 98 8 94 9.97e-26 103
Msa0674560 AT3G54770.2 59.756 82 27 2 32 108 1 81 1.12e-24 98.6
Msa0674560 AT5G53720.1 55.556 81 36 0 16 96 9 89 1.13e-24 95.1
Msa0674560 AT5G55550.5 37.037 108 58 3 17 115 7 113 4.03e-19 87.0
Msa0674560 AT5G55550.5 31.707 123 74 1 17 139 111 223 2.58e-11 63.9
Msa0674560 AT5G55550.4 37.037 108 58 3 17 115 7 113 4.03e-19 87.0
Msa0674560 AT5G55550.4 31.707 123 74 1 17 139 111 223 2.58e-11 63.9
Msa0674560 AT5G55550.9 37.037 108 58 3 17 115 7 113 4.03e-19 87.0
Msa0674560 AT5G55550.9 31.707 123 74 1 17 139 111 223 2.58e-11 63.9
Msa0674560 AT5G55550.7 37.037 108 58 3 17 115 7 113 4.03e-19 87.0
Msa0674560 AT5G55550.7 31.707 123 74 1 17 139 111 223 2.58e-11 63.9
Msa0674560 AT5G55550.1 37.037 108 58 3 17 115 7 113 4.03e-19 87.0
Msa0674560 AT5G55550.1 31.707 123 74 1 17 139 111 223 2.58e-11 63.9
Msa0674560 AT5G55550.2 37.037 108 58 3 17 115 7 113 5.01e-19 86.7
Msa0674560 AT5G55550.2 31.707 123 74 1 17 139 111 223 2.65e-11 63.9
Msa0674560 AT5G55550.3 37.037 108 58 3 17 115 7 113 5.01e-19 86.7
Msa0674560 AT5G55550.3 31.707 123 74 1 17 139 111 223 2.65e-11 63.9
Msa0674560 AT5G55550.6 37.037 108 58 3 17 115 7 113 5.01e-19 86.7
Msa0674560 AT5G55550.6 31.707 123 74 1 17 139 111 223 2.65e-11 63.9
Msa0674560 AT5G55550.11 37.037 108 58 3 17 115 7 113 5.01e-19 86.7
Msa0674560 AT5G55550.11 31.707 123 74 1 17 139 111 223 2.65e-11 63.9
Msa0674560 AT2G22090.1 48.193 83 43 0 12 94 100 182 1.09e-18 84.7
Msa0674560 AT2G22090.2 48.193 83 43 0 12 94 100 182 1.13e-18 84.7
Msa0674560 AT5G47620.1 48.529 68 34 1 17 84 7 73 1.32e-18 85.1
Msa0674560 AT5G47620.2 48.529 68 34 1 17 84 7 73 1.32e-18 85.1
Msa0674560 AT5G47620.5 48.529 68 34 1 17 84 7 73 1.32e-18 85.1
Msa0674560 AT5G47620.4 47.826 69 35 1 16 84 6 73 1.55e-18 85.1
Msa0674560 AT4G26650.1 34.752 141 78 5 17 148 16 151 2.33e-18 84.7
Msa0674560 AT4G26650.2 34.752 141 78 5 17 148 13 148 2.47e-18 84.7
Msa0674560 AT5G55550.8 39.080 87 50 3 17 102 7 91 3.86e-18 84.3
Msa0674560 AT5G55550.8 31.707 123 74 1 17 139 158 270 2.62e-11 63.9
Msa0674560 AT5G55550.10 39.080 87 50 3 17 102 7 91 4.34e-18 84.0
Msa0674560 AT5G55550.10 31.707 123 74 1 17 139 158 270 3.01e-11 63.9
Msa0674560 AT3G07810.1 36.111 108 57 3 17 115 7 111 7.06e-17 80.5
Msa0674560 AT3G07810.2 36.111 108 57 3 17 115 7 111 7.28e-17 80.5
Msa0674560 AT3G23830.2 44.872 78 42 1 16 92 35 112 1.58e-16 74.7
Msa0674560 AT3G23830.1 44.872 78 42 1 16 92 35 112 1.58e-16 74.7
Msa0674560 AT3G15010.1 44.706 85 47 0 12 96 71 155 2.06e-16 79.0
Msa0674560 AT3G15010.1 28.125 96 69 0 9 104 160 255 2.50e-11 63.9
Msa0674560 AT3G15010.2 44.706 85 47 0 12 96 71 155 2.06e-16 79.0
Msa0674560 AT3G15010.2 28.125 96 69 0 9 104 160 255 2.50e-11 63.9
Msa0674560 AT4G39260.3 38.710 93 49 3 17 109 7 91 2.56e-16 72.8
Msa0674560 AT4G39260.2 41.558 77 42 2 17 91 7 82 1.85e-15 71.6
Msa0674560 AT4G13850.3 37.079 89 52 1 16 104 35 119 2.90e-15 71.6
Msa0674560 AT4G13850.2 37.079 89 52 1 16 104 35 119 3.55e-15 71.6
Msa0674560 AT4G13850.1 37.079 89 52 1 16 104 35 119 3.96e-15 71.6
Msa0674560 AT4G39260.1 41.558 77 42 2 17 91 7 82 4.91e-15 71.6
Msa0674560 AT4G39260.4 45.000 60 32 1 17 76 7 65 7.71e-15 69.3
Msa0674560 AT2G33410.1 40.000 75 44 1 17 91 7 80 1.09e-14 73.9
Msa0674560 AT4G14300.1 37.500 80 49 1 12 91 2 80 1.60e-14 73.2
Msa0674560 AT4G14300.2 37.500 80 49 1 12 91 2 80 1.60e-14 73.2
Msa0674560 AT2G41060.1 38.554 83 51 0 12 94 124 206 1.88e-14 73.2
Msa0674560 AT2G41060.3 38.554 83 51 0 12 94 124 206 1.88e-14 73.2
Msa0674560 AT2G41060.2 38.554 83 51 0 12 94 124 206 1.88e-14 73.2
Msa0674560 AT1G17640.2 41.667 72 41 1 17 88 67 137 2.57e-14 72.4
Msa0674560 AT1G17640.1 41.667 72 41 1 17 88 67 137 2.57e-14 72.4
Msa0674560 AT1G17640.3 41.667 72 41 1 17 88 67 137 2.57e-14 72.4
Msa0674560 AT3G56860.9 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.11 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.8 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.5 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.7 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.2 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.6 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.10 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.3 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.1 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT3G56860.4 39.759 83 50 0 12 94 136 218 2.78e-14 72.8
Msa0674560 AT4G13850.4 41.667 72 38 1 16 87 35 102 4.11e-14 68.2
Msa0674560 AT2G21660.2 39.759 83 46 3 11 91 4 84 9.51e-14 67.8
Msa0674560 AT2G21660.1 39.759 83 46 3 11 91 4 84 1.34e-13 67.8
Msa0674560 AT2G19380.1 43.210 81 46 0 12 92 404 484 6.40e-13 68.9
Msa0674560 AT2G22100.1 40.260 77 46 0 12 88 159 235 1.57e-12 67.4
Msa0674560 AT2G27330.1 30.275 109 71 2 2 109 11 115 3.22e-12 62.4
Msa0674560 AT5G59865.1 53.061 49 23 0 16 64 26 74 3.29e-12 62.4
Msa0674560 AT3G26420.1 37.113 97 48 3 17 111 8 93 3.78e-12 65.1
Msa0674560 AT5G61030.2 39.130 69 38 1 16 84 40 104 4.93e-12 65.5
Msa0674560 AT5G61030.1 39.130 69 38 1 16 84 40 104 4.93e-12 65.5
Msa0674560 AT1G58470.2 43.243 74 38 1 17 86 7 80 5.30e-12 65.5
Msa0674560 AT1G58470.1 43.243 74 38 1 17 86 7 80 5.30e-12 65.5
Msa0674560 AT1G74230.1 36.364 77 49 0 16 92 34 110 1.13e-11 64.3
Msa0674560 AT5G06210.1 37.705 61 38 0 16 76 34 94 6.85e-11 59.7
Msa0674560 AT3G08000.1 43.860 57 32 0 17 73 42 98 6.98e-11 59.7

Find 195 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGTCCATCATTGGAATT+TGG 0.131932 4_4:+22027887 Msa0674560:three_prime_UTR
AATTGTCCTGCCAAATTAAT+TGG 0.140954 4_4:-22020080 None:intergenic
GGGATACCTTATAATGTTTA+TGG 0.144330 4_4:+22022235 Msa0674560:CDS
CAACTGCAACCTTGCTTCTT+TGG 0.147666 4_4:+22020743 Msa0674560:CDS
CCTCCTAAAAGTAACTAAAT+TGG 0.168879 4_4:-22028570 None:intergenic
CTTAGTCTTTAGTGTTAATT+AGG 0.175440 4_4:+22028396 Msa0674560:three_prime_UTR
GGTTTCCTCTCTATATAATT+TGG 0.176107 4_4:+22027955 Msa0674560:three_prime_UTR
ATGTTTAAGTCTATGTTATT+TGG 0.185503 4_4:+22028913 Msa0674560:three_prime_UTR
ACGTAACCTTGGGAGATATT+TGG 0.200695 4_4:+22028697 Msa0674560:three_prime_UTR
CAACATGACTCCAATTAATT+TGG 0.208507 4_4:+22020070 Msa0674560:exon
ATGTTATTTGGATTGTAATT+AGG 0.224334 4_4:+22028925 Msa0674560:three_prime_UTR
AACTGCAACCTTGCTTCTTT+GGG 0.227071 4_4:+22020744 Msa0674560:CDS
ATTAATTTGGCAGGACAATT+TGG 0.230601 4_4:+22020083 Msa0674560:CDS
AAGATGACTAATTGGTTTAT+TGG 0.242291 4_4:-22028463 None:intergenic
CATGTACTACATATGCTAAT+TGG 0.250198 4_4:-22028614 None:intergenic
AGAGAGAGAGATTAAATAAA+AGG 0.251443 4_4:-22028842 None:intergenic
ACAGCACAGTACCCTGTTTA+TGG 0.256018 4_4:+22026893 Msa0674560:CDS
TACTTTCACTTTACCCTTCA+TGG 0.257875 4_4:-22028184 None:intergenic
GAGGAGGAGGGAGGAACATT+AGG 0.264611 4_4:+22022125 Msa0674560:CDS
CCAAAGGGAAGATGACTAAT+TGG 0.268401 4_4:-22028471 None:intergenic
GGTTCTTTCCAGACAGGATT+TGG 0.274909 4_4:+22022154 Msa0674560:CDS
CGTAACCTTGGGAGATATTT+GGG 0.289854 4_4:+22028698 Msa0674560:three_prime_UTR
GTGTTGAAGGCTTAGATCTT+TGG 0.295951 4_4:-22020770 None:intergenic
CCTTCGCCATATTGAAGATA+TGG 0.296505 4_4:-22026971 None:intergenic
GCTCTTCTACCATCAATTAT+AGG 0.296553 4_4:-22020720 None:intergenic
GAAAGGGGTGTTACATAATA+AGG 0.313435 4_4:-22019733 None:intergenic
ACTACCGGCGGCTACACTTC+TGG 0.318698 4_4:+22027007 Msa0674560:CDS
TCATACCCATAAACATTATA+AGG 0.319240 4_4:-22022241 None:intergenic
AACATAATACAAGAAATTAA+AGG 0.330102 4_4:-22029016 None:intergenic
AAAGTCCATCATTGGAATTT+GGG 0.334638 4_4:+22027888 Msa0674560:three_prime_UTR
CCAATTAGTCATCTTCCCTT+TGG 0.337520 4_4:+22028471 Msa0674560:three_prime_UTR
TTTCCACTCATCATTATCAT+AGG 0.338195 4_4:+22027913 Msa0674560:three_prime_UTR
TACTATCCATATCTTCAATA+TGG 0.340336 4_4:+22026965 Msa0674560:CDS
GTATTAATATTACCATGTTT+TGG 0.340726 4_4:-22020792 None:intergenic
GCTGGTCCATTTCCATAAAC+AGG 0.342026 4_4:-22026905 None:intergenic
GCTATAGGAAATAGCTAAGT+TGG 0.346018 4_4:+22028089 Msa0674560:three_prime_UTR
CTCCTAAAAGTAACTAAATT+GGG 0.349620 4_4:-22028569 None:intergenic
TCTCCTGCTGCCTTGCCATC+AGG 0.355688 4_4:+22027136 Msa0674560:CDS
CATTATAAGGTATCCCTTGC+TGG 0.367371 4_4:-22022228 None:intergenic
CAATTAGTCATCTTCCCTTT+GGG 0.369822 4_4:+22028472 Msa0674560:three_prime_UTR
CAGTACCCTGTTTATGGAAA+TGG 0.369987 4_4:+22026899 Msa0674560:CDS
AATTGAAGAATCTCACAAAT+AGG 0.371283 4_4:+22028234 Msa0674560:three_prime_UTR
GGATACCTTATAATGTTTAT+GGG 0.377409 4_4:+22022236 Msa0674560:CDS
TACACTTCTGGCCAAGGTTA+TGG 0.379037 4_4:+22027019 Msa0674560:CDS
TGGAAAATGCAGAGCTACTA+TGG 0.382407 4_4:+22026854 Msa0674560:intron
AGGAGGAGGGAGGAACATTA+GGG 0.383370 4_4:+22022126 Msa0674560:CDS
AGGAGAAGGTGCAAGAGAAA+TGG 0.383934 4_4:-22027119 None:intergenic
TGAATAGAAGAGAGACAATT+AGG 0.389785 4_4:-22019820 None:intergenic
TGAAAATTTGTAGGAGGAGG+AGG 0.391447 4_4:+22022112 Msa0674560:intron
AGTCTCTAACGATGAGGAAT+TGG 0.395605 4_4:-22027717 None:intergenic
CTTCAATATGGCGAAGGAAC+CGG 0.396046 4_4:+22026977 Msa0674560:CDS
AAACCTTTGGGCCCCTATGG+GGG 0.402979 4_4:-22027937 None:intergenic
TGAGCAATTTGGTGAGATCT+TGG 0.406717 4_4:+22020181 Msa0674560:CDS
AGGAAACCTTTGGGCCCCTA+TGG 0.407169 4_4:-22027940 None:intergenic
TATTCTCCAATTGCTTCAAC+TGG 0.407811 4_4:+22027070 Msa0674560:CDS
GGGAGATATTTGGGTTCCCT+TGG 0.412752 4_4:+22028707 Msa0674560:three_prime_UTR
ATGTACTACATATGCTAATT+GGG 0.421438 4_4:-22028613 None:intergenic
TTATATAGAGAGGAAACCTT+TGG 0.421945 4_4:-22027950 None:intergenic
ATTGCAAAATATTATCCTCT+AGG 0.431422 4_4:-22020020 None:intergenic
CATTCTCTGCTGGATGAGAA+TGG 0.433705 4_4:+22028972 Msa0674560:three_prime_UTR
GAATGGGAAAATTTAGCCCT+TGG 0.433835 4_4:+22028118 Msa0674560:three_prime_UTR
TACCCACCAGTTGAAGCAAT+TGG 0.437493 4_4:-22027076 None:intergenic
GGTGGGTATGCTCAGCACTA+TGG 0.438801 4_4:+22027091 Msa0674560:CDS
ACATACAAATCCATAGCCTT+TGG 0.439269 4_4:-22020240 None:intergenic
AACCTTTGGGCCCCTATGGG+GGG 0.439527 4_4:-22027936 None:intergenic
CCACTCCTCCAAATCCTGTC+TGG 0.440497 4_4:-22022162 None:intergenic
GGAGAAGGTGCAAGAGAAAT+GGG 0.444244 4_4:-22027118 None:intergenic
AGTCATCTTCCCTTTGGGTA+AGG 0.444966 4_4:+22028477 Msa0674560:three_prime_UTR
AGTTGCATTGGTTCCTTGAA+AGG 0.449518 4_4:+22028036 Msa0674560:three_prime_UTR
TAATCACCAACAAAAGCTAT+AGG 0.452546 4_4:+22028074 Msa0674560:three_prime_UTR
AATGCAAACTGGTGGGGTGG+GGG 0.453309 4_4:+22019688 Msa0674560:five_prime_UTR
TGAAGTCTATAGATAGATCT+AGG 0.453443 4_4:-22019944 None:intergenic
TAATTAACTTTGACCCATGA+AGG 0.456901 4_4:+22028170 Msa0674560:three_prime_UTR
TTTGCTCACCAACCATGGTT+AGG 0.457866 4_4:+22028739 Msa0674560:three_prime_UTR
AGGGAGGAACATTAGGGTAA+TGG 0.461392 4_4:+22022132 Msa0674560:CDS
GACTTCAAGAAGCAATAACT+TGG 0.463253 4_4:-22027780 None:intergenic
GGGAGGAACATTAGGGTAAT+GGG 0.468258 4_4:+22022133 Msa0674560:CDS
TAGTATCATCAATCAACCTT+TGG 0.471189 4_4:+22027805 Msa0674560:three_prime_UTR
GCCGCCGGTAGTTGCGCCGC+CGG 0.471628 4_4:-22026996 None:intergenic
AAAACACTTGCACGTAACCT+TGG 0.471871 4_4:+22028686 Msa0674560:three_prime_UTR
TAATGCAAACTGGTGGGGTG+GGG 0.471989 4_4:+22019687 Msa0674560:five_prime_UTR
AGGATCAATTCATTCTCTGC+TGG 0.472302 4_4:+22028962 Msa0674560:three_prime_UTR
ATTGTAAGAAATCATCGATT+GGG 0.472594 4_4:-22029100 None:intergenic
ACTTTCACTTTACCCTTCAT+GGG 0.473532 4_4:-22028183 None:intergenic
AATTGCTAATCACACCTCTC+TGG 0.475193 4_4:+22028298 Msa0674560:three_prime_UTR
CAGACAGGATTTGGAGGAGT+GGG 0.480274 4_4:+22022163 Msa0674560:CDS
GTCATCTTCCCTTTGGGTAA+GGG 0.484651 4_4:+22028478 Msa0674560:three_prime_UTR
ACCGTAGGGTAACTGTAATC+TGG 0.486593 4_4:-22023397 None:intergenic
CTAATTAACACTAAAGACTA+AGG 0.486901 4_4:-22028395 None:intergenic
TCATCTTCCCTTTGGGTAAG+GGG 0.487192 4_4:+22028479 Msa0674560:three_prime_UTR
TATATAGAGAGGAAACCTTT+GGG 0.487309 4_4:-22027949 None:intergenic
GGAAACCTTTGGGCCCCTAT+GGG 0.488032 4_4:-22027939 None:intergenic
ATGACTCCAATTAATTTGGC+AGG 0.491636 4_4:+22020074 Msa0674560:CDS
TAGTATTGAATAATGCAAAC+TGG 0.494311 4_4:+22019677 Msa0674560:five_prime_UTR
AAACCTGATGGCAAGGCAGC+AGG 0.495678 4_4:-22027139 None:intergenic
CTTCTTCTCAAGGTAGTGGT+TGG 0.497331 4_4:-22019874 None:intergenic
AAACACTTGCACGTAACCTT+GGG 0.501684 4_4:+22028687 Msa0674560:three_prime_UTR
ATAATGCAAACTGGTGGGGT+GGG 0.501749 4_4:+22019686 Msa0674560:five_prime_UTR
TCTCCAATTGCTTCAACTGG+TGG 0.504755 4_4:+22027073 Msa0674560:CDS
AAAAGCCCAAATTCCAATGA+TGG 0.506294 4_4:-22027893 None:intergenic
AATTCATTGTGGCTAAACTA+AGG 0.506987 4_4:+22028537 Msa0674560:three_prime_UTR
AAAAGGAGGAGATTGTGAAA+TGG 0.507926 4_4:-22028825 None:intergenic
CAAGCTCTCATAGCAGCATC+AGG 0.508307 4_4:-22020684 None:intergenic
GTTTATGGAAATGGACCAGC+TGG 0.512520 4_4:+22026908 Msa0674560:CDS
TATTGTAAGAAATCATCGAT+TGG 0.512765 4_4:-22029101 None:intergenic
GATGCTGCTCCTATAATTGA+TGG 0.515656 4_4:+22020711 Msa0674560:CDS
GATGGCAAGGCAGCAGGAGA+AGG 0.517316 4_4:-22027133 None:intergenic
GGAACCGGCGGCGCAACTAC+CGG 0.519759 4_4:+22026992 Msa0674560:CDS
GAAACCTTTGGGCCCCTATG+GGG 0.519998 4_4:-22027938 None:intergenic
GGATCTTCTTCTCAAGGTAG+TGG 0.524106 4_4:-22019878 None:intergenic
ACTGGAAGATCCAAAGGCTA+TGG 0.530867 4_4:+22020230 Msa0674560:CDS
ATATTGAAGATATGGATAGT+AGG 0.531712 4_4:-22026963 None:intergenic
TTGCAAAATATTATCCTCTA+GGG 0.532532 4_4:-22020019 None:intergenic
AGTTTAGCAATCGTGGACAT+TGG 0.532861 4_4:+22028332 Msa0674560:three_prime_UTR
GTAATGGGTTCTTTCCAGAC+AGG 0.536127 4_4:+22022148 Msa0674560:CDS
TTAGAAGGATCTTCTTCTCA+AGG 0.536139 4_4:-22019884 None:intergenic
TATAGATAGATCTAGGTGAT+GGG 0.536729 4_4:-22019937 None:intergenic
GAAAATTTGTAGGAGGAGGA+GGG 0.539063 4_4:+22022113 Msa0674560:intron
CCTTGCTGGATGGCATAATG+AGG 0.539851 4_4:-22022214 None:intergenic
CAAAGAAGCAAGGTTGCAGT+TGG 0.540744 4_4:-22020742 None:intergenic
AAAGTGAAAGTAATAAAGAA+TGG 0.542677 4_4:+22028195 Msa0674560:three_prime_UTR
CTCCAATTGCTTCAACTGGT+GGG 0.542942 4_4:+22027074 Msa0674560:CDS
CCAGTCATCATCCCTCCAGC+TGG 0.546713 4_4:-22026923 None:intergenic
GAATATTGAAACACCTGAGG+TGG 0.547295 4_4:-22027052 None:intergenic
TCTTTCCAGACAGGATTTGG+AGG 0.549169 4_4:+22022157 Msa0674560:CDS
GCTACTATGGTATGTACGGT+GGG 0.552444 4_4:+22026867 Msa0674560:CDS
GTAATTAGGAAATCTAAAGT+AGG 0.554338 4_4:+22028939 Msa0674560:three_prime_UTR
AATAATGCAAACTGGTGGGG+TGG 0.554708 4_4:+22019685 Msa0674560:five_prime_UTR
ATAGCCTTTGGATCTTCCAG+TGG 0.554952 4_4:-22020228 None:intergenic
TCACACCTCTCTGGATGAAG+AGG 0.555010 4_4:+22028307 Msa0674560:three_prime_UTR
TGCTGCTATGAGAGCTTGTG+TGG 0.555924 4_4:+22020689 Msa0674560:CDS
CCAGCTGGAGGGATGATGAC+TGG 0.557715 4_4:+22026923 Msa0674560:CDS
CTATAGATAGATCTAGGTGA+TGG 0.559793 4_4:-22019938 None:intergenic
CAGAGCTACTATGGTATGTA+CGG 0.561819 4_4:+22026863 Msa0674560:intron
TAGTAAGATCATCATCATCA+AGG 0.562193 4_4:+22020042 Msa0674560:five_prime_UTR
CCAGACAGGATTTGGAGGAG+TGG 0.563630 4_4:+22022162 Msa0674560:CDS
GAGAGAGATTAAATAAAAGG+AGG 0.568313 4_4:-22028839 None:intergenic
TGGTGTTAACTACCCACCTC+AGG 0.572192 4_4:+22027039 Msa0674560:CDS
TTCACTTTGCTCACCAACCA+TGG 0.572317 4_4:+22028734 Msa0674560:three_prime_UTR
CTCATTATGCCATCCAGCAA+GGG 0.572637 4_4:+22022215 Msa0674560:CDS
GGGATATAACAAAGCTAACA+TGG 0.573239 4_4:-22029080 None:intergenic
ACCTATGTCCTAACCATGGT+TGG 0.576898 4_4:-22028747 None:intergenic
GGAAAATTTAGCCCTTGGAA+AGG 0.578352 4_4:+22028123 Msa0674560:three_prime_UTR
TATTGAATAATGCAAACTGG+TGG 0.578407 4_4:+22019680 Msa0674560:five_prime_UTR
AATTAACTTTGACCCATGAA+GGG 0.578430 4_4:+22028171 Msa0674560:three_prime_UTR
CCTCATTATGCCATCCAGCA+AGG 0.580886 4_4:+22022214 Msa0674560:CDS
ATTAGGAAATCTAAAGTAGG+AGG 0.583122 4_4:+22028942 Msa0674560:three_prime_UTR
ATAAAATTAATAGAGTATGA+AGG 0.583666 4_4:-22028892 None:intergenic
TGAGGGAAGGTTGCAGCTGA+AGG 0.584132 4_4:-22022196 None:intergenic
TTTCTTATGTAAATTCATTG+TGG 0.584655 4_4:+22028526 Msa0674560:three_prime_UTR
AATACAAGAAATTAAAGGCA+TGG 0.589123 4_4:-22029011 None:intergenic
CCATATCTTCAATATGGCGA+AGG 0.590078 4_4:+22026971 Msa0674560:CDS
AACTACATCAATGGAATGTG+TGG 0.594443 4_4:+22028653 Msa0674560:three_prime_UTR
ATAGATCTAGGTGATGGGGT+TGG 0.595388 4_4:-22019932 None:intergenic
ACTCTCCAAATTATATAGAG+AGG 0.596251 4_4:-22027960 None:intergenic
GGCGGCTACACTTCTGGCCA+AGG 0.598379 4_4:+22027013 Msa0674560:CDS
ACCAACCATGGTTAGGACAT+AGG 0.600992 4_4:+22028746 Msa0674560:three_prime_UTR
AGAGGAAAGTTTAGCAATCG+TGG 0.603847 4_4:+22028325 Msa0674560:three_prime_UTR
ATTGAATAATGCAAACTGGT+GGG 0.605724 4_4:+22019681 Msa0674560:five_prime_UTR
ATAAGGTATCCCTTGCTGGA+TGG 0.606510 4_4:-22022224 None:intergenic
GTTATCACTGACAAAGCCAC+TGG 0.609344 4_4:+22020212 Msa0674560:CDS
ACTTCAAGAAGCAATAACTT+GGG 0.610938 4_4:-22027779 None:intergenic
GGGAACCCAAATATCTCCCA+AGG 0.616584 4_4:-22028703 None:intergenic
CTGTGCCACAGGCGTGACAA+TGG 0.617286 4_4:+22027683 Msa0674560:intron
CTGGTCCATTTCCATAAACA+GGG 0.624073 4_4:-22026904 None:intergenic
TATGGAAATGGACCAGCTGG+AGG 0.625601 4_4:+22026911 Msa0674560:CDS
GGTAGTTAACACCATAACCT+TGG 0.625763 4_4:-22027030 None:intergenic
TTTGGACACCCAAAGAAGCA+AGG 0.627687 4_4:-22020752 None:intergenic
AAAGCCACTGGAAGATCCAA+AGG 0.627799 4_4:+22020224 Msa0674560:CDS
CTTGCTGGATGGCATAATGA+GGG 0.627859 4_4:-22022213 None:intergenic
AATTTGTAGGAGGAGGAGGG+AGG 0.630642 4_4:+22022116 Msa0674560:intron
ATAGATAGATCTAGGTGATG+GGG 0.630730 4_4:-22019936 None:intergenic
ACCGGCGGCGCAACTACCGG+CGG 0.633500 4_4:+22026995 Msa0674560:CDS
ATGGAAATGGACCAGCTGGA+GGG 0.637061 4_4:+22026912 Msa0674560:CDS
TTGGCCAGAAGTGTAGCCGC+CGG 0.638787 4_4:-22027011 None:intergenic
AGCTACTATGGTATGTACGG+TGG 0.639695 4_4:+22026866 Msa0674560:CDS
TCATAGCTAGCTAACCCTAG+AGG 0.642107 4_4:+22020005 Msa0674560:five_prime_UTR
AAACACCATGGTTAGACCAA+AGG 0.643399 4_4:-22027821 None:intergenic
GGGCCTATGATAATGATGAG+TGG 0.643771 4_4:-22027916 None:intergenic
AAGCCTTCAACACCAAAACA+TGG 0.645444 4_4:+22020780 Msa0674560:CDS
TGAGCAAAGTGAAGTAACCA+AGG 0.649197 4_4:-22028724 None:intergenic
AATATTGAAACACCTGAGGT+GGG 0.650438 4_4:-22027051 None:intergenic
ATCAACCTTTGGTCTAACCA+TGG 0.651912 4_4:+22027816 Msa0674560:three_prime_UTR
GCCAGATTACAGTTACCCTA+CGG 0.652312 4_4:+22023396 Msa0674560:CDS
ATTCACCTATGTCCTAACCA+TGG 0.660474 4_4:-22028751 None:intergenic
TTGAATAATGCAAACTGGTG+GGG 0.662572 4_4:+22019682 Msa0674560:five_prime_UTR
CAATATGGCGAAGGAACCGG+CGG 0.663093 4_4:+22026980 Msa0674560:CDS
CTGGATGGCATAATGAGGGA+AGG 0.669727 4_4:-22022209 None:intergenic
CTACTATGGTATGTACGGTG+GGG 0.669988 4_4:+22026868 Msa0674560:CDS
ACTTTCCTCTTCATCCAGAG+AGG 0.670728 4_4:-22028312 None:intergenic
GAGCAAAGTGAAGTAACCAA+GGG 0.684205 4_4:-22028723 None:intergenic
GATATGAGTCTCTAACGATG+AGG 0.693503 4_4:-22027723 None:intergenic
GGAGAATATTGAAACACCTG+AGG 0.699373 4_4:-22027055 None:intergenic
GCTGGAGGGATGATGACTGG+TGG 0.745650 4_4:+22026926 Msa0674560:CDS
GTGTGATGAGAGAAACACCA+TGG 0.786298 4_4:-22027833 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAATTAAAATTAATT+TGG - chr4_4:22024083-22024102 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG - chr4_4:22025680-22025699 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr4_4:22025681-22025700 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr4_4:22025681-22025700 Msa0674560:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr4_4:22025680-22025699 Msa0674560:intron 0.0%
!! TATATATATATATATATATA+GGG - chr4_4:22025681-22025700 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr4_4:22025680-22025699 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr4_4:22025680-22025699 Msa0674560:intron 0.0%
!! TATATATATATATATATATA+GGG + chr4_4:22025681-22025700 Msa0674560:intron 0.0%
!! AAATAATAATAATTTGGAAA+AGG - chr4_4:22021184-22021203 None:intergenic 10.0%
!! AAACACAAATAATAATAATT+TGG - chr4_4:22021190-22021209 None:intergenic 10.0%
!! AAATAGTTAAATAATATTTG+AGG - chr4_4:22023088-22023107 None:intergenic 10.0%
!!! ATATTTTATGATTTTTTCTA+AGG - chr4_4:22023182-22023201 None:intergenic 10.0%
!!! TAATTTATTAATATTTGTTG+GGG + chr4_4:22024229-22024248 Msa0674560:intron 10.0%
!!! TATTTATTTTTATTCAAAGT+AGG - chr4_4:22024766-22024785 None:intergenic 10.0%
!! TATGACTAAATTTAAATAAA+TGG - chr4_4:22025180-22025199 None:intergenic 10.0%
!!! CAAATTAATTTTCATAAAAA+AGG + chr4_4:22028434-22028453 Msa0674560:three_prime_UTR 10.0%
!! AAAAAGATACTAAATTTAGA+AGG - chr4_4:22019902-22019921 None:intergenic 15.0%
!! TAAATAAAAATAATCCGTAT+AGG + chr4_4:22020395-22020414 Msa0674560:intron 15.0%
!! TCTTTATTAATCTTTCATTA+TGG + chr4_4:22020857-22020876 Msa0674560:intron 15.0%
!!! TTAACATTTAGAGATATTTT+TGG - chr4_4:22020898-22020917 None:intergenic 15.0%
!! ATAAGATGAGTTTATTAATT+AGG - chr4_4:22020982-22021001 None:intergenic 15.0%
!! TATATAGGAAAATATAGTTT+AGG - chr4_4:22021485-22021504 None:intergenic 15.0%
!!! GTTTGAAGTTAAATATATAT+AGG - chr4_4:22021500-22021519 None:intergenic 15.0%
!!! TTTTGATGTTTTTTATTGAA+TGG - chr4_4:22022008-22022027 None:intergenic 15.0%
!!! TTTTCTTTTGAAATATTGAA+TGG + chr4_4:22022063-22022082 Msa0674560:intron 15.0%
!! GCATATTAAATTATATTGAA+TGG - chr4_4:22022399-22022418 None:intergenic 15.0%
!! AGAAAGAAAGAAAAAAATAA+TGG + chr4_4:22022578-22022597 Msa0674560:intron 15.0%
!! GTAAAATTAATTGTGTAATT+TGG - chr4_4:22023042-22023061 None:intergenic 15.0%
!!! ATTTTATGAAACTTTTTTGA+AGG - chr4_4:22023155-22023174 None:intergenic 15.0%
!!! ATATTGAATTCATTTGTTAT+AGG - chr4_4:22023566-22023585 None:intergenic 15.0%
!!! TCAAATTTTCTTTTTTGTTA+AGG + chr4_4:22023618-22023637 Msa0674560:intron 15.0%
!!! AATTTTTTAATGTGAATAAG+TGG + chr4_4:22023661-22023680 Msa0674560:intron 15.0%
!! AATTAAGTTTGTCAAAAAAA+AGG + chr4_4:22023993-22024012 Msa0674560:intron 15.0%
!!! ATATGAACAACAATTTTTTA+AGG - chr4_4:22025276-22025295 None:intergenic 15.0%
!!! ATTTTTTTTGAAAGAATGTT+TGG - chr4_4:22025435-22025454 None:intergenic 15.0%
!! CATTCTTTCAAAAAAAATTA+TGG + chr4_4:22025437-22025456 Msa0674560:intron 15.0%
!! AAAACCCATATATATATATA+TGG + chr4_4:22026173-22026192 Msa0674560:intron 15.0%
!! AAACCCATATATATATATAT+GGG + chr4_4:22026174-22026193 Msa0674560:intron 15.0%
!! TAACCCATATATATATATAT+GGG - chr4_4:22025674-22025693 None:intergenic 15.0%
!! ATAACCCATATATATATATA+TGG - chr4_4:22025673-22025692 None:intergenic 15.0%
!! TGTGTGTATATATATATATA+GGG - chr4_4:22026394-22026413 None:intergenic 15.0%
!!! TTTTCTTGAACAAAAAAAAT+GGG - chr4_4:22028012-22028031 None:intergenic 15.0%
!!! TTTTTCTTGAACAAAAAAAA+TGG - chr4_4:22028013-22028032 None:intergenic 15.0%
!! ATAAAATTAATAGAGTATGA+AGG - chr4_4:22028895-22028914 None:intergenic 15.0%
!! AACATAATACAAGAAATTAA+AGG - chr4_4:22029019-22029038 None:intergenic 15.0%
!! ACCAAAAAAAAAAAACACTT+GGG + chr4_4:22019974-22019993 Msa0674560:five_prime_UTR 20.0%
!!! AAGAAATATTTTGAGCAATT+TGG + chr4_4:22020170-22020189 Msa0674560:CDS 20.0%
!! AATTCATTATTTCAACTAGA+AGG + chr4_4:22020331-22020350 Msa0674560:intron 20.0%
!! ATCATTTATAACTTCCTATA+CGG - chr4_4:22020412-22020431 None:intergenic 20.0%
!!! AATTTGTTTGTTTCCAATTT+AGG + chr4_4:22020647-22020666 Msa0674560:intron 20.0%
!!! GTATTAATATTACCATGTTT+TGG - chr4_4:22020795-22020814 None:intergenic 20.0%
!!! AATATTTCATGCATGTTTTT+GGG + chr4_4:22021347-22021366 Msa0674560:intron 20.0%
!!! TTTTTTTTCGATACTTCTTA+GGG - chr4_4:22021397-22021416 None:intergenic 20.0%
!!! TTTTTTTTTCGATACTTCTT+AGG - chr4_4:22021398-22021417 None:intergenic 20.0%
!! AAACCAAAAATATCACTAAA+GGG - chr4_4:22021445-22021464 None:intergenic 20.0%
!! AAAACCAAAAATATCACTAA+AGG - chr4_4:22021446-22021465 None:intergenic 20.0%
!! AAAAATACAGAATACATTGT+TGG - chr4_4:22021737-22021756 None:intergenic 20.0%
!! ATGTAATGATGAAAATTTGT+AGG + chr4_4:22022103-22022122 Msa0674560:intron 20.0%
!! TATAATTTAATATGCTAGCT+AGG + chr4_4:22022404-22022423 Msa0674560:intron 20.0%
!!! ACTGATTTAATCTATAAGAT+AGG + chr4_4:22022811-22022830 Msa0674560:intron 20.0%
!! CTGATTTAATCTATAAGATA+GGG + chr4_4:22022812-22022831 Msa0674560:intron 20.0%
!! TATGATTCTGTTTGATATAA+CGG - chr4_4:22023262-22023281 None:intergenic 20.0%
!!! TCTATATATACCTTTTACTT+AGG + chr4_4:22023453-22023472 Msa0674560:intron 20.0%
!!! TCAATTTATCTTTTTTTGAG+TGG + chr4_4:22023589-22023608 Msa0674560:intron 20.0%
!! CTAGAACTTATACTAAAATT+AGG - chr4_4:22023829-22023848 None:intergenic 20.0%
!! AAAATACTTGTATTTCTCTT+AGG + chr4_4:22024341-22024360 Msa0674560:intron 20.0%
!! AAATACTTGTATTTCTCTTA+GGG + chr4_4:22024342-22024361 Msa0674560:intron 20.0%
!!! GATTTGGTATTTTATGTTTT+TGG + chr4_4:22024626-22024645 Msa0674560:intron 20.0%
!!! AAATTCTATTTTTCCCAATT+TGG + chr4_4:22024835-22024854 Msa0674560:intron 20.0%
!!! AATTCTATTTTTCCCAATTT+GGG + chr4_4:22024836-22024855 Msa0674560:intron 20.0%
!! ATGTCAAAATCATAAGATAT+AGG + chr4_4:22024862-22024881 Msa0674560:intron 20.0%
!!! TTTTTTTCCTTTCTAAAAAG+TGG - chr4_4:22025139-22025158 None:intergenic 20.0%
!! AATTTAGTCATAAACTTTCA+CGG + chr4_4:22025188-22025207 Msa0674560:intron 20.0%
!!! ATTGGATTAAATAATTTTGG+GGG - chr4_4:22025233-22025252 None:intergenic 20.0%
!!! GATTGGATTAAATAATTTTG+GGG - chr4_4:22025234-22025253 None:intergenic 20.0%
!!! GGATTGGATTAAATAATTTT+GGG - chr4_4:22025235-22025254 None:intergenic 20.0%
!!! TGGATTGGATTAAATAATTT+TGG - chr4_4:22025236-22025255 None:intergenic 20.0%
!! GCCAAACATATATATATATA+GGG + chr4_4:22025459-22025478 Msa0674560:intron 20.0%
!! ACCCTATATATATATATGTT+TGG - chr4_4:22025463-22025482 None:intergenic 20.0%
!! GTGTGTGTATATATATATAT+AGG - chr4_4:22026395-22026414 None:intergenic 20.0%
!! TTACAACAAAATGAAATTCT+CGG - chr4_4:22026619-22026638 None:intergenic 20.0%
!!! ATGATCATGGTTTTAAATTA+GGG + chr4_4:22027182-22027201 Msa0674560:intron 20.0%
!! TTTCTTGAACAAAAAAAATG+GGG - chr4_4:22028011-22028030 None:intergenic 20.0%
!! AAAGTGAAAGTAATAAAGAA+TGG + chr4_4:22028195-22028214 Msa0674560:three_prime_UTR 20.0%
!! TTTCTTATGTAAATTCATTG+TGG + chr4_4:22028526-22028545 Msa0674560:three_prime_UTR 20.0%
!! ATGTTTAAGTCTATGTTATT+TGG + chr4_4:22028913-22028932 Msa0674560:three_prime_UTR 20.0%
!!! ATGTTATTTGGATTGTAATT+AGG + chr4_4:22028925-22028944 Msa0674560:three_prime_UTR 20.0%
!! TAGTATTGAATAATGCAAAC+TGG + chr4_4:22019677-22019696 Msa0674560:five_prime_UTR 25.0%
! AGATAGAAAAAAAGAGGAAA+GGG - chr4_4:22019752-22019771 None:intergenic 25.0%
! AAGATAGAAAAAAAGAGGAA+AGG - chr4_4:22019753-22019772 None:intergenic 25.0%
! AGCAAAAGATAGAAAAAAAG+AGG - chr4_4:22019758-22019777 None:intergenic 25.0%
! GACCAAAAAAAAAAAACACT+TGG + chr4_4:22019973-22019992 Msa0674560:five_prime_UTR 25.0%
!!! TCCCAAGTGTTTTTTTTTTT+TGG - chr4_4:22019978-22019997 None:intergenic 25.0%
! TTGCAAAATATTATCCTCTA+GGG - chr4_4:22020022-22020041 None:intergenic 25.0%
! ATTGCAAAATATTATCCTCT+AGG - chr4_4:22020023-22020042 None:intergenic 25.0%
! ATATTGAAACTCTTTACACT+TGG - chr4_4:22021332-22021351 None:intergenic 25.0%
!! CAATATTTCATGCATGTTTT+TGG + chr4_4:22021346-22021365 Msa0674560:intron 25.0%
!! ATTCCCTTTAGTGATATTTT+TGG + chr4_4:22021439-22021458 Msa0674560:intron 25.0%
! AAAATCCACATGCATTATTA+CGG + chr4_4:22021781-22021800 Msa0674560:intron 25.0%
!!! ATTTTGCTCTTGTTTTTTTG+TGG + chr4_4:22021861-22021880 Msa0674560:intron 25.0%
!!! TTTTGCTCTTGTTTTTTTGT+GGG + chr4_4:22021862-22021881 Msa0674560:intron 25.0%
! CTCAAATTTGTATGTATGTT+TGG + chr4_4:22021931-22021950 Msa0674560:intron 25.0%
!!! ATGTATGTTTGGACTTTTTT+AGG + chr4_4:22021942-22021961 Msa0674560:intron 25.0%
! TAATGATGAAAATTTGTAGG+AGG + chr4_4:22022106-22022125 Msa0674560:intron 25.0%
! GGATACCTTATAATGTTTAT+GGG + chr4_4:22022236-22022255 Msa0674560:CDS 25.0%
! TCATACCCATAAACATTATA+AGG - chr4_4:22022244-22022263 None:intergenic 25.0%
! CCTTAAAGTACAAATGTAAA+TGG - chr4_4:22022331-22022350 None:intergenic 25.0%
! CCATTTACATTTGTACTTTA+AGG + chr4_4:22022328-22022347 Msa0674560:intron 25.0%
!!! TTACATTTGTACTTTAAGGT+TGG + chr4_4:22022332-22022351 Msa0674560:intron 25.0%
! AAAGAATACTACATATGAAC+TGG - chr4_4:22022465-22022484 None:intergenic 25.0%
! TGATGAAAAAGTTACATCAA+GGG - chr4_4:22022527-22022546 None:intergenic 25.0%
! TTGATGAAAAAGTTACATCA+AGG - chr4_4:22022528-22022547 None:intergenic 25.0%
! CATATAGAGAAATATGTGTA+AGG - chr4_4:22022551-22022570 None:intergenic 25.0%
!!! TCAAACTTGTTGTTATTCAT+TGG + chr4_4:22022725-22022744 Msa0674560:intron 25.0%
! GATAAAATGAGAGATAAAGT+AGG + chr4_4:22022836-22022855 Msa0674560:intron 25.0%
! ATTATTTGAAAGAGAGTAGT+TGG - chr4_4:22023539-22023558 None:intergenic 25.0%
!!! AGTTCTAGAATTAATTTGTG+TGG + chr4_4:22023841-22023860 Msa0674560:intron 25.0%
!!! TAGAATTAATTTGTGTGGTA+GGG + chr4_4:22023846-22023865 Msa0674560:intron 25.0%
!! TCAAATGGTATTTTCAAAGT+TGG - chr4_4:22023904-22023923 None:intergenic 25.0%
! ATCAAGTCTATCATATGTAA+TGG + chr4_4:22024049-22024068 Msa0674560:intron 25.0%
! TCAAGTCTATCATATGTAAT+GGG + chr4_4:22024050-22024069 Msa0674560:intron 25.0%
!! TTATTAATATTTGTTGGGGA+TGG + chr4_4:22024233-22024252 Msa0674560:intron 25.0%
!! TATTAATATTTGTTGGGGAT+GGG + chr4_4:22024234-22024253 Msa0674560:intron 25.0%
! CAATTATAAGACTAATATGG+TGG - chr4_4:22024313-22024332 None:intergenic 25.0%
! CGACAATTATAAGACTAATA+TGG - chr4_4:22024316-22024335 None:intergenic 25.0%
! TCAATTTATCGAATTTCTCT+TGG - chr4_4:22024475-22024494 None:intergenic 25.0%
! TTTAGAAACTAAACGAGATT+TGG + chr4_4:22024610-22024629 Msa0674560:intron 25.0%
!!! ATTCTATTTTTCCCAATTTG+GGG + chr4_4:22024837-22024856 Msa0674560:intron 25.0%
! AAATCATAAGATATAGGTGA+TGG + chr4_4:22024868-22024887 Msa0674560:intron 25.0%
! TCTTTGATACCTATATTTGT+GGG - chr4_4:22024894-22024913 None:intergenic 25.0%
! ACAAATATAGGTATCAAAGA+GGG + chr4_4:22024894-22024913 Msa0674560:intron 25.0%
!!! ACAATCATTTGTTGTTTCTA+TGG - chr4_4:22025068-22025087 None:intergenic 25.0%
! ATAGAAACAACAAATGATTG+TGG + chr4_4:22025067-22025086 Msa0674560:intron 25.0%
!!! TTTCTTTCCACTTTTTAGAA+AGG + chr4_4:22025129-22025148 Msa0674560:intron 25.0%
!! TTGGATTAAATAATTTTGGG+GGG - chr4_4:22025232-22025251 None:intergenic 25.0%
!! AAGTAGTTAGATTTTACACA+TGG - chr4_4:22025389-22025408 None:intergenic 25.0%
! GGCCAAACATATATATATAT+AGG + chr4_4:22025458-22025477 Msa0674560:intron 25.0%
! AGACAAAAAAAAAATCAGAG+TGG - chr4_4:22026440-22026459 None:intergenic 25.0%
!! TATTTTCTTTGAGCATAACA+AGG - chr4_4:22026588-22026607 None:intergenic 25.0%
! TTTATTATTTCCCACTTCAA+AGG - chr4_4:22026816-22026835 None:intergenic 25.0%
! AGTGGGAAATAATAAAAATG+TGG + chr4_4:22026820-22026839 Msa0674560:intron 25.0%
! AAAATGTGGTTGTAATGTAA+TGG + chr4_4:22026834-22026853 Msa0674560:intron 25.0%
! ATATTGAAGATATGGATAGT+AGG - chr4_4:22026966-22026985 None:intergenic 25.0%
! TACTATCCATATCTTCAATA+TGG + chr4_4:22026965-22026984 Msa0674560:CDS 25.0%
!!! CATGATCATGGTTTTAAATT+AGG + chr4_4:22027181-22027200 Msa0674560:intron 25.0%
! TGACTACATCTATTAAATAG+CGG - chr4_4:22027280-22027299 None:intergenic 25.0%
!! TGTTCATATATGTATTGATG+AGG + chr4_4:22027634-22027653 Msa0674560:intron 25.0%
! CAAGAAAAAAAAAGTTGCAT+TGG + chr4_4:22028024-22028043 Msa0674560:three_prime_UTR 25.0%
!!! TTGGTGATTAAACATCTTTT+TGG - chr4_4:22028064-22028083 None:intergenic 25.0%
! AATTGAAGAATCTCACAAAT+AGG + chr4_4:22028234-22028253 Msa0674560:three_prime_UTR 25.0%
! TAGATGTTACCATACAAAAA+AGG - chr4_4:22028366-22028385 None:intergenic 25.0%
! CTAATTAACACTAAAGACTA+AGG - chr4_4:22028398-22028417 None:intergenic 25.0%
!! CTTAGTCTTTAGTGTTAATT+AGG + chr4_4:22028396-22028415 Msa0674560:three_prime_UTR 25.0%
!! AAGATGACTAATTGGTTTAT+TGG - chr4_4:22028466-22028485 None:intergenic 25.0%
! CTCCTAAAAGTAACTAAATT+GGG - chr4_4:22028572-22028591 None:intergenic 25.0%
!!! CAATTTAGTTACTTTTAGGA+GGG + chr4_4:22028571-22028590 Msa0674560:three_prime_UTR 25.0%
! ATGTACTACATATGCTAATT+GGG - chr4_4:22028616-22028635 None:intergenic 25.0%
! AGAGAGAGAGATTAAATAAA+AGG - chr4_4:22028845-22028864 None:intergenic 25.0%
!! GTAATTAGGAAATCTAAAGT+AGG + chr4_4:22028939-22028958 Msa0674560:three_prime_UTR 25.0%
! AATACAAGAAATTAAAGGCA+TGG - chr4_4:22029014-22029033 None:intergenic 25.0%
!! ATTGTAAGAAATCATCGATT+GGG - chr4_4:22029103-22029122 None:intergenic 25.0%
! TATTGTAAGAAATCATCGAT+TGG - chr4_4:22029104-22029123 None:intergenic 25.0%
TATTGAATAATGCAAACTGG+TGG + chr4_4:22019680-22019699 Msa0674560:five_prime_UTR 30.0%
ATTGAATAATGCAAACTGGT+GGG + chr4_4:22019681-22019700 Msa0674560:five_prime_UTR 30.0%
GATAGAAAAAAAGAGGAAAG+GGG - chr4_4:22019751-22019770 None:intergenic 30.0%
TGAATAGAAGAGAGACAATT+AGG - chr4_4:22019823-22019842 None:intergenic 30.0%
TATAGATAGATCTAGGTGAT+GGG - chr4_4:22019940-22019959 None:intergenic 30.0%
TGAAGTCTATAGATAGATCT+AGG - chr4_4:22019947-22019966 None:intergenic 30.0%
TAGTAAGATCATCATCATCA+AGG + chr4_4:22020042-22020061 Msa0674560:five_prime_UTR 30.0%
CAACATGACTCCAATTAATT+TGG + chr4_4:22020070-22020089 Msa0674560:exon 30.0%
AATTGTCCTGCCAAATTAAT+TGG - chr4_4:22020083-22020102 None:intergenic 30.0%
! ATTAATTTGGCAGGACAATT+TGG + chr4_4:22020083-22020102 Msa0674560:CDS 30.0%
! ACATACACCAAAGTTTTTGT+TGG + chr4_4:22020113-22020132 Msa0674560:CDS 30.0%
CTAGTGAAAGAAACTAAACA+TGG - chr4_4:22020504-22020523 None:intergenic 30.0%
ATTAACATTAAGCTTGTACG+TGG - chr4_4:22021154-22021173 None:intergenic 30.0%
ACGTACAAGCTTAATGTTAA+TGG + chr4_4:22021153-22021172 Msa0674560:intron 30.0%
!!! CTAGTAGTGTTTTAAGAACT+AGG - chr4_4:22021527-22021546 None:intergenic 30.0%
AAATCCACATGCATTATTAC+GGG + chr4_4:22021782-22021801 Msa0674560:intron 30.0%
GGGATACCTTATAATGTTTA+TGG + chr4_4:22022235-22022254 Msa0674560:CDS 30.0%
TATAGAAAAGAGAGAAAGAG+AGG - chr4_4:22022303-22022322 None:intergenic 30.0%
!!! GGTTTTGTTGTTTTATGAGT+TGG - chr4_4:22022378-22022397 None:intergenic 30.0%
GATGAAAAAGTTACATCAAG+GGG - chr4_4:22022526-22022545 None:intergenic 30.0%
!! ACTTGTTGTTATTCATTGGT+AGG + chr4_4:22022729-22022748 Msa0674560:intron 30.0%
CATGATATAACATGCATTCT+TGG - chr4_4:22023225-22023244 None:intergenic 30.0%
ATAGAGAATGGAAGAATTCA+AGG - chr4_4:22023355-22023374 None:intergenic 30.0%
! TTCTTCCATTCTCTATTTTC+AGG + chr4_4:22023359-22023378 Msa0674560:intron 30.0%
! AGTTAAAAGTACATACCGTA+GGG - chr4_4:22023414-22023433 None:intergenic 30.0%
! AAGTTAAAAGTACATACCGT+AGG - chr4_4:22023415-22023434 None:intergenic 30.0%
AGATCACAAATCTTTCATGT+AGG - chr4_4:22023765-22023784 None:intergenic 30.0%
!! CTAGAATTAATTTGTGTGGT+AGG + chr4_4:22023845-22023864 Msa0674560:intron 30.0%
! AATGGTATTTTCAAAGTTGG+AGG - chr4_4:22023901-22023920 None:intergenic 30.0%
!!! ACAACTTTTTCAGGTATCTT+TGG - chr4_4:22024518-22024537 None:intergenic 30.0%
!! TTCTATTTTTCCCAATTTGG+GGG + chr4_4:22024838-22024857 Msa0674560:intron 30.0%
CTCTTTGATACCTATATTTG+TGG - chr4_4:22024895-22024914 None:intergenic 30.0%
CACAAATATAGGTATCAAAG+AGG + chr4_4:22024893-22024912 Msa0674560:intron 30.0%
AGTGGAAAGAAATAGAACAA+AGG - chr4_4:22025121-22025140 None:intergenic 30.0%
AAAAAACACAGTGATGTTTG+TGG + chr4_4:22025153-22025172 Msa0674560:intron 30.0%
TTATAGCTGTGAGACAATTA+TGG + chr4_4:22025409-22025428 Msa0674560:intron 30.0%
ATAAAAGACACCTTCACAAA+AGG - chr4_4:22026353-22026372 None:intergenic 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + chr4_4:22025550-22025569 Msa0674560:intron 30.0%
ACACCTTCATAAAAAGTAGT+TGG - chr4_4:22026209-22026228 None:intergenic 30.0%
!! ACACCAACTTACTTTTATGA+AGG + chr4_4:22025772-22025791 Msa0674560:intron 30.0%
ACACCTTCATAAAAGTAAGT+TGG - chr4_4:22026084-22026103 None:intergenic 30.0%
ACACCTTCATAAAAGTAAGT+TGG + chr4_4:22026084-22026103 Msa0674560:intron 30.0%
!! ACACCAACTTACTTTTATGA+AGG - chr4_4:22025772-22025791 None:intergenic 30.0%
ACACCTTCATAAAAAGTAGT+TGG + chr4_4:22026209-22026228 Msa0674560:intron 30.0%
!!! ACACCAACTACTTTTTATGA+AGG - chr4_4:22025550-22025569 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG + chr4_4:22026353-22026372 Msa0674560:intron 30.0%
!!! ATGATTTTCACCTTTGAAGT+GGG + chr4_4:22026803-22026822 Msa0674560:intron 30.0%
TAAGTTCAACTATCGAGATT+TGG + chr4_4:22027515-22027534 Msa0674560:intron 30.0%
ACTTCAAGAAGCAATAACTT+GGG - chr4_4:22027782-22027801 None:intergenic 30.0%
TAGTATCATCAATCAACCTT+TGG + chr4_4:22027805-22027824 Msa0674560:three_prime_UTR 30.0%
!!! CAATGATGGACTTTTTTCTT+TGG - chr4_4:22027882-22027901 None:intergenic 30.0%
CAAAGAAAAAAGTCCATCAT+TGG + chr4_4:22027880-22027899 Msa0674560:three_prime_UTR 30.0%
AAAAGTCCATCATTGGAATT+TGG + chr4_4:22027887-22027906 Msa0674560:three_prime_UTR 30.0%
AAAGTCCATCATTGGAATTT+GGG + chr4_4:22027888-22027907 Msa0674560:three_prime_UTR 30.0%
TTTCCACTCATCATTATCAT+AGG + chr4_4:22027913-22027932 Msa0674560:three_prime_UTR 30.0%
TATATAGAGAGGAAACCTTT+GGG - chr4_4:22027952-22027971 None:intergenic 30.0%
TTATATAGAGAGGAAACCTT+TGG - chr4_4:22027953-22027972 None:intergenic 30.0%
GGTTTCCTCTCTATATAATT+TGG + chr4_4:22027955-22027974 Msa0674560:three_prime_UTR 30.0%
ACTCTCCAAATTATATAGAG+AGG - chr4_4:22027963-22027982 None:intergenic 30.0%
TTGAACAAAAAAAATGGGGA+GGG - chr4_4:22028007-22028026 None:intergenic 30.0%
TAATCACCAACAAAAGCTAT+AGG + chr4_4:22028074-22028093 Msa0674560:three_prime_UTR 30.0%
! CTATTTCCTATAGCTTTTGT+TGG - chr4_4:22028083-22028102 None:intergenic 30.0%
! AGCTAAGTTGGAAAAATGAA+TGG + chr4_4:22028101-22028120 Msa0674560:three_prime_UTR 30.0%
! GCTAAGTTGGAAAAATGAAT+GGG + chr4_4:22028102-22028121 Msa0674560:three_prime_UTR 30.0%
!! TTTTTACTTAGCCTTTCCAA+GGG - chr4_4:22028137-22028156 None:intergenic 30.0%
!!! TTTTTTACTTAGCCTTTCCA+AGG - chr4_4:22028138-22028157 None:intergenic 30.0%
TAATTAACTTTGACCCATGA+AGG + chr4_4:22028170-22028189 Msa0674560:three_prime_UTR 30.0%
AATTAACTTTGACCCATGAA+GGG + chr4_4:22028171-22028190 Msa0674560:three_prime_UTR 30.0%
TGTTACCATACAAAAAAGGT+GGG - chr4_4:22028362-22028381 None:intergenic 30.0%
ATGTTACCATACAAAAAAGG+TGG - chr4_4:22028363-22028382 None:intergenic 30.0%
AATTCATTGTGGCTAAACTA+AGG + chr4_4:22028537-22028556 Msa0674560:three_prime_UTR 30.0%
!!! AGCCCAATTTAGTTACTTTT+AGG + chr4_4:22028567-22028586 Msa0674560:three_prime_UTR 30.0%
CCTCCTAAAAGTAACTAAAT+TGG - chr4_4:22028573-22028592 None:intergenic 30.0%
!!! CCAATTTAGTTACTTTTAGG+AGG + chr4_4:22028570-22028589 Msa0674560:three_prime_UTR 30.0%
CATGTACTACATATGCTAAT+TGG - chr4_4:22028617-22028636 None:intergenic 30.0%
!! CATTTTGAGAACTACATCAA+TGG + chr4_4:22028644-22028663 Msa0674560:three_prime_UTR 30.0%
GAGAGAGATTAAATAAAAGG+AGG - chr4_4:22028842-22028861 None:intergenic 30.0%
ATTTAATCTCTCTCTCTCTA+TGG + chr4_4:22028848-22028867 Msa0674560:three_prime_UTR 30.0%
! TGGCAACTTTTAAATTGAGA+TGG + chr4_4:22028868-22028887 Msa0674560:three_prime_UTR 30.0%
! ATTAGGAAATCTAAAGTAGG+AGG + chr4_4:22028942-22028961 Msa0674560:three_prime_UTR 30.0%
TTGAATAATGCAAACTGGTG+GGG + chr4_4:22019682-22019701 Msa0674560:five_prime_UTR 35.0%
!! GAAAGGGGTGTTACATAATA+AGG - chr4_4:22019736-22019755 None:intergenic 35.0%
TTAGAAGGATCTTCTTCTCA+AGG - chr4_4:22019887-22019906 None:intergenic 35.0%
ATAGATAGATCTAGGTGATG+GGG - chr4_4:22019939-22019958 None:intergenic 35.0%
CTATAGATAGATCTAGGTGA+TGG - chr4_4:22019941-22019960 None:intergenic 35.0%
! ATGACTCCAATTAATTTGGC+AGG + chr4_4:22020074-22020093 Msa0674560:CDS 35.0%
! TACACCAAAGTTTTTGTTGG+AGG + chr4_4:22020116-22020135 Msa0674560:CDS 35.0%
CAATCCTCCAACAAAAACTT+TGG - chr4_4:22020123-22020142 None:intergenic 35.0%
! CAAAGTTTTTGTTGGAGGAT+TGG + chr4_4:22020121-22020140 Msa0674560:CDS 35.0%
ACATACAAATCCATAGCCTT+TGG - chr4_4:22020243-22020262 None:intergenic 35.0%
! GATTGATTCTCAATGAATCG+TGG + chr4_4:22020429-22020448 Msa0674560:intron 35.0%
TCACGAAAAGTGACCTAAAT+TGG - chr4_4:22020663-22020682 None:intergenic 35.0%
GCTCTTCTACCATCAATTAT+AGG - chr4_4:22020723-22020742 None:intergenic 35.0%
!!! TTACCATGTTTTGGTGTTGA+AGG - chr4_4:22020786-22020805 None:intergenic 35.0%
!!! ATTGTTGGTTTTTGTCTTGC+AGG - chr4_4:22021722-22021741 None:intergenic 35.0%
TGATGAAAATTTGTAGGAGG+AGG + chr4_4:22022109-22022128 Msa0674560:intron 35.0%
ATACTACATATGAACTGGCA+AGG - chr4_4:22022460-22022479 None:intergenic 35.0%
GAAGCTATAAGTAGCAAAAG+TGG - chr4_4:22022641-22022660 None:intergenic 35.0%
! TTGCTACTTATAGCTTCACA+TGG + chr4_4:22022644-22022663 Msa0674560:intron 35.0%
! TGCTACTTATAGCTTCACAT+GGG + chr4_4:22022645-22022664 Msa0674560:intron 35.0%
GAGTACCTGAAAATAGAGAA+TGG - chr4_4:22023367-22023386 None:intergenic 35.0%
CAAAACGCATCCTAAGTAAA+AGG - chr4_4:22023466-22023485 None:intergenic 35.0%
! AAGGAGTGAATTGATAACAG+TGG - chr4_4:22024274-22024293 None:intergenic 35.0%
!! TCATGCACAACAACTTTTTC+AGG - chr4_4:22024527-22024546 None:intergenic 35.0%
GAAAAAGTTGTTGTGCATGA+AGG + chr4_4:22024527-22024546 Msa0674560:intron 35.0%
! TTTTGACATACCCCCAAATT+GGG - chr4_4:22024851-22024870 None:intergenic 35.0%
!! ATTTTGACATACCCCCAAAT+TGG - chr4_4:22024852-22024871 None:intergenic 35.0%
! TCAAGCTTGCTTATGAATGT+GGG + chr4_4:22024935-22024954 Msa0674560:intron 35.0%
TGAGCTGTAGTGAAAAAAGT+TGG - chr4_4:22024963-22024982 None:intergenic 35.0%
TTATTGTACCCTACAGAATG+TGG + chr4_4:22024983-22025002 Msa0674560:intron 35.0%
TATTGTACCCTACAGAATGT+GGG + chr4_4:22024984-22025003 Msa0674560:intron 35.0%
ATGCAGCAATAGTACTGTTA+AGG - chr4_4:22025032-22025051 None:intergenic 35.0%
CAAAAGTTTCCATTGGACTA+TGG + chr4_4:22025343-22025362 Msa0674560:intron 35.0%
ATTCTACAACCATAGTCCAA+TGG - chr4_4:22025355-22025374 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + chr4_4:22025487-22025506 Msa0674560:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr4_4:22025599-22025618 Msa0674560:intron 35.0%
! TTTTATCAAGTCACACCTCA+AGG - chr4_4:22026237-22026256 None:intergenic 35.0%
!!! CACCACACTACTTTTTATGA+AGG + chr4_4:22025639-22025658 Msa0674560:intron 35.0%
CACCTTCATAAAAAGTAGTG+TGG - chr4_4:22026210-22026229 None:intergenic 35.0%
CTAAAAGACACCTTCACAAA+AGG - chr4_4:22026139-22026158 None:intergenic 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr4_4:22025599-22025618 Msa0674560:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG - chr4_4:22025599-22025618 None:intergenic 35.0%
! CTAGAAGACACATTTTGTGA+AGG - chr4_4:22026152-22026171 None:intergenic 35.0%
CACCTTCATAAAAAGTAGTG+TGG + chr4_4:22026210-22026229 Msa0674560:intron 35.0%
!!! CACCACACTACTTTTTATGA+AGG - chr4_4:22025639-22025658 None:intergenic 35.0%
! TTTTATCAAGTCACACCTCA+AGG + chr4_4:22026237-22026256 Msa0674560:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG - chr4_4:22025599-22025618 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG - chr4_4:22025487-22025506 None:intergenic 35.0%
!! GATGATTTTCACCTTTGAAG+TGG + chr4_4:22026802-22026821 Msa0674560:intron 35.0%
AATATTGAAACACCTGAGGT+GGG - chr4_4:22027054-22027073 None:intergenic 35.0%
TATTCTCCAATTGCTTCAAC+TGG + chr4_4:22027070-22027089 Msa0674560:CDS 35.0%
AGTGAGAAGTAAAAACCTGA+TGG - chr4_4:22027154-22027173 None:intergenic 35.0%
TCACTATACTCTCATGATCA+TGG + chr4_4:22027169-22027188 Msa0674560:intron 35.0%
TATTGACCAAACTACACTTG+CGG + chr4_4:22027234-22027253 Msa0674560:intron 35.0%
ATCCTATGCACTTATTCAAC+TGG - chr4_4:22027360-22027379 None:intergenic 35.0%
GACTTCAAGAAGCAATAACT+TGG - chr4_4:22027783-22027802 None:intergenic 35.0%
AAAAGCCCAAATTCCAATGA+TGG - chr4_4:22027896-22027915 None:intergenic 35.0%
TGAACAAAAAAAATGGGGAG+GGG - chr4_4:22028006-22028025 None:intergenic 35.0%
CTTGAACAAAAAAAATGGGG+AGG - chr4_4:22028008-22028027 None:intergenic 35.0%
!! CATCTTTTTGGTACCTTTCA+AGG - chr4_4:22028052-22028071 None:intergenic 35.0%
GCTATAGGAAATAGCTAAGT+TGG + chr4_4:22028089-22028108 Msa0674560:three_prime_UTR 35.0%
ACTTTCACTTTACCCTTCAT+GGG - chr4_4:22028186-22028205 None:intergenic 35.0%
TACTTTCACTTTACCCTTCA+TGG - chr4_4:22028187-22028206 None:intergenic 35.0%
CAATTAGTCATCTTCCCTTT+GGG + chr4_4:22028472-22028491 Msa0674560:three_prime_UTR 35.0%
AACTACATCAATGGAATGTG+TGG + chr4_4:22028653-22028672 Msa0674560:three_prime_UTR 35.0%
AAAAGGAGGAGATTGTGAAA+TGG - chr4_4:22028828-22028847 None:intergenic 35.0%
GGGATATAACAAAGCTAACA+TGG - chr4_4:22029083-22029102 None:intergenic 35.0%
AGAGAGAGAGAGAGAGAATT+GGG - chr4_4:22019792-22019811 None:intergenic 40.0%
!!! TTTTTGTTGGAGGATTGGCT+TGG + chr4_4:22020126-22020145 Msa0674560:CDS 40.0%
!!! TTTTGTTGGAGGATTGGCTT+GGG + chr4_4:22020127-22020146 Msa0674560:CDS 40.0%
! TGAGCAATTTGGTGAGATCT+TGG + chr4_4:22020181-22020200 Msa0674560:CDS 40.0%
GATGCTGCTCCTATAATTGA+TGG + chr4_4:22020711-22020730 Msa0674560:CDS 40.0%
AACTGCAACCTTGCTTCTTT+GGG + chr4_4:22020744-22020763 Msa0674560:CDS 40.0%
GTGTTGAAGGCTTAGATCTT+TGG - chr4_4:22020773-22020792 None:intergenic 40.0%
AAGCCTTCAACACCAAAACA+TGG + chr4_4:22020780-22020799 Msa0674560:CDS 40.0%
GCTTGAATATTCTTCCAGAG+TGG + chr4_4:22021283-22021302 Msa0674560:intron 40.0%
CATAGCATAACTTTCCACTC+TGG - chr4_4:22021300-22021319 None:intergenic 40.0%
AAGACCCGTAATAATGCATG+TGG - chr4_4:22021789-22021808 None:intergenic 40.0%
!!! TGCTCTTGTTTTTTTGTGGG+AGG + chr4_4:22021865-22021884 Msa0674560:intron 40.0%
!!! GCTCTTGTTTTTTTGTGGGA+GGG + chr4_4:22021866-22021885 Msa0674560:intron 40.0%
TGAAAATTTGTAGGAGGAGG+AGG + chr4_4:22022112-22022131 Msa0674560:intron 40.0%
GAAAATTTGTAGGAGGAGGA+GGG + chr4_4:22022113-22022132 Msa0674560:intron 40.0%
! CATTATAAGGTATCCCTTGC+TGG - chr4_4:22022231-22022250 None:intergenic 40.0%
CAAATAGACCTGATTCCACA+TGG + chr4_4:22022500-22022519 Msa0674560:intron 40.0%
TTTCATGTAGGTGCAAGTCT+AGG - chr4_4:22023753-22023772 None:intergenic 40.0%
GACTAATATGGTGGCTGAAT+CGG - chr4_4:22024304-22024323 None:intergenic 40.0%
! GTCAAGCTTGCTTATGAATG+TGG + chr4_4:22024934-22024953 Msa0674560:intron 40.0%
ATTGTACCCTACAGAATGTG+GGG + chr4_4:22024985-22025004 Msa0674560:intron 40.0%
! CTAGAAGACACCTTTTGTGA+AGG + chr4_4:22025710-22025729 Msa0674560:intron 40.0%
! TTTTAGCAAGTCACACCTCA+AGG - chr4_4:22026024-22026043 None:intergenic 40.0%
TTGCTAAAAGACACCACCAA+AGG + chr4_4:22025849-22025868 Msa0674560:intron 40.0%
TGCTAAAAGACACCACCAAA+GGG + chr4_4:22025850-22025869 Msa0674560:intron 40.0%
TGCTAAAAGACACCACCAAA+GGG - chr4_4:22025850-22025869 None:intergenic 40.0%
TTGCTAAAAGACACCACCAA+AGG - chr4_4:22025849-22025868 None:intergenic 40.0%
! TTTTAGCAAGTCACACCTCA+AGG + chr4_4:22026024-22026043 Msa0674560:intron 40.0%
TGGAAAATGCAGAGCTACTA+TGG + chr4_4:22026854-22026873 Msa0674560:intron 40.0%
CAGAGCTACTATGGTATGTA+CGG + chr4_4:22026863-22026882 Msa0674560:intron 40.0%
CAGTACCCTGTTTATGGAAA+TGG + chr4_4:22026899-22026918 Msa0674560:CDS 40.0%
CTGGTCCATTTCCATAAACA+GGG - chr4_4:22026907-22026926 None:intergenic 40.0%
CCTTCGCCATATTGAAGATA+TGG - chr4_4:22026974-22026993 None:intergenic 40.0%
CCATATCTTCAATATGGCGA+AGG + chr4_4:22026971-22026990 Msa0674560:CDS 40.0%
GGTAGTTAACACCATAACCT+TGG - chr4_4:22027033-22027052 None:intergenic 40.0%
GAATATTGAAACACCTGAGG+TGG - chr4_4:22027055-22027074 None:intergenic 40.0%
GGAGAATATTGAAACACCTG+AGG - chr4_4:22027058-22027077 None:intergenic 40.0%
GAAGTAAAAACCTGATGGCA+AGG - chr4_4:22027149-22027168 None:intergenic 40.0%
ATATGTCCGCAAGTGTAGTT+TGG - chr4_4:22027243-22027262 None:intergenic 40.0%
GACCAGTTGAATAAGTGCAT+AGG + chr4_4:22027355-22027374 Msa0674560:intron 40.0%
CTTAGCCAAATCTCGATAGT+TGG + chr4_4:22027429-22027448 Msa0674560:intron 40.0%
TCAGTCCAACTATCGAGATT+TGG - chr4_4:22027437-22027456 None:intergenic 40.0%
!! TCGAGATTTGACTTGATCGT+TGG + chr4_4:22027478-22027497 Msa0674560:intron 40.0%
! TTGACTTGATCGTTGGATTG+AGG + chr4_4:22027485-22027504 Msa0674560:intron 40.0%
!! ACTATCGAGATTTGGCTTGA+CGG + chr4_4:22027523-22027542 Msa0674560:intron 40.0%
!! GACGGGTTGAAAAAGTTCAT+AGG + chr4_4:22027541-22027560 Msa0674560:intron 40.0%
AGTCTCTAACGATGAGGAAT+TGG - chr4_4:22027720-22027739 None:intergenic 40.0%
GATATGAGTCTCTAACGATG+AGG - chr4_4:22027726-22027745 None:intergenic 40.0%
ATCAACCTTTGGTCTAACCA+TGG + chr4_4:22027816-22027835 Msa0674560:three_prime_UTR 40.0%
AAACACCATGGTTAGACCAA+AGG - chr4_4:22027824-22027843 None:intergenic 40.0%
AACAAAAAAAATGGGGAGGG+GGG - chr4_4:22028004-22028023 None:intergenic 40.0%
GAACAAAAAAAATGGGGAGG+GGG - chr4_4:22028005-22028024 None:intergenic 40.0%
!! AGTTGCATTGGTTCCTTGAA+AGG + chr4_4:22028036-22028055 Msa0674560:three_prime_UTR 40.0%
GAATGGGAAAATTTAGCCCT+TGG + chr4_4:22028118-22028137 Msa0674560:three_prime_UTR 40.0%
GGAAAATTTAGCCCTTGGAA+AGG + chr4_4:22028123-22028142 Msa0674560:three_prime_UTR 40.0%
AATTGCTAATCACACCTCTC+TGG + chr4_4:22028298-22028317 Msa0674560:three_prime_UTR 40.0%
AGAGGAAAGTTTAGCAATCG+TGG + chr4_4:22028325-22028344 Msa0674560:three_prime_UTR 40.0%
AGTTTAGCAATCGTGGACAT+TGG + chr4_4:22028332-22028351 Msa0674560:three_prime_UTR 40.0%
!!! GATGTCCCACCTTTTTTGTA+TGG + chr4_4:22028354-22028373 Msa0674560:three_prime_UTR 40.0%
CCAAAGGGAAGATGACTAAT+TGG - chr4_4:22028474-22028493 None:intergenic 40.0%
CCAATTAGTCATCTTCCCTT+TGG + chr4_4:22028471-22028490 Msa0674560:three_prime_UTR 40.0%
! TTTTTCTCCCCTTACCCAAA+GGG - chr4_4:22028489-22028508 None:intergenic 40.0%
AAAACACTTGCACGTAACCT+TGG + chr4_4:22028686-22028705 Msa0674560:three_prime_UTR 40.0%
AAACACTTGCACGTAACCTT+GGG + chr4_4:22028687-22028706 Msa0674560:three_prime_UTR 40.0%
ACGTAACCTTGGGAGATATT+TGG + chr4_4:22028697-22028716 Msa0674560:three_prime_UTR 40.0%
CGTAACCTTGGGAGATATTT+GGG + chr4_4:22028698-22028717 Msa0674560:three_prime_UTR 40.0%
GAGCAAAGTGAAGTAACCAA+GGG - chr4_4:22028726-22028745 None:intergenic 40.0%
TGAGCAAAGTGAAGTAACCA+AGG - chr4_4:22028727-22028746 None:intergenic 40.0%
ATTCACCTATGTCCTAACCA+TGG - chr4_4:22028754-22028773 None:intergenic 40.0%
AGGATCAATTCATTCTCTGC+TGG + chr4_4:22028962-22028981 Msa0674560:three_prime_UTR 40.0%
AATAATGCAAACTGGTGGGG+TGG + chr4_4:22019685-22019704 Msa0674560:five_prime_UTR 45.0%
ATAATGCAAACTGGTGGGGT+GGG + chr4_4:22019686-22019705 Msa0674560:five_prime_UTR 45.0%
AGAGAGAGAGAGAATTGGGA+GGG - chr4_4:22019788-22019807 None:intergenic 45.0%
GAGAGAGAGAGAGAGAGAAT+TGG - chr4_4:22019793-22019812 None:intergenic 45.0%
!!! GGTGTGTTTTTGGAGATGAG+TGG - chr4_4:22019856-22019875 None:intergenic 45.0%
!! GGTAGTGGTTGGTGTGTTTT+TGG - chr4_4:22019866-22019885 None:intergenic 45.0%
! CTTCTTCTCAAGGTAGTGGT+TGG - chr4_4:22019877-22019896 None:intergenic 45.0%
GGATCTTCTTCTCAAGGTAG+TGG - chr4_4:22019881-22019900 None:intergenic 45.0%
!! ATAGATCTAGGTGATGGGGT+TGG - chr4_4:22019935-22019954 None:intergenic 45.0%
TCATAGCTAGCTAACCCTAG+AGG + chr4_4:22020005-22020024 Msa0674560:five_prime_UTR 45.0%
GTTATCACTGACAAAGCCAC+TGG + chr4_4:22020212-22020231 Msa0674560:CDS 45.0%
AAAGCCACTGGAAGATCCAA+AGG + chr4_4:22020224-22020243 Msa0674560:CDS 45.0%
ATAGCCTTTGGATCTTCCAG+TGG - chr4_4:22020231-22020250 None:intergenic 45.0%
ACTGGAAGATCCAAAGGCTA+TGG + chr4_4:22020230-22020249 Msa0674560:CDS 45.0%
CAAAGAAGCAAGGTTGCAGT+TGG - chr4_4:22020745-22020764 None:intergenic 45.0%
CAACTGCAACCTTGCTTCTT+TGG + chr4_4:22020743-22020762 Msa0674560:CDS 45.0%
TTTGGACACCCAAAGAAGCA+AGG - chr4_4:22020755-22020774 None:intergenic 45.0%
AAGCAAGACACACAGCTAAG+TGG + chr4_4:22021253-22021272 Msa0674560:intron 45.0%
AGGGAGGAACATTAGGGTAA+TGG + chr4_4:22022132-22022151 Msa0674560:CDS 45.0%
GGGAGGAACATTAGGGTAAT+GGG + chr4_4:22022133-22022152 Msa0674560:CDS 45.0%
!! GTAATGGGTTCTTTCCAGAC+AGG + chr4_4:22022148-22022167 Msa0674560:CDS 45.0%
GGTTCTTTCCAGACAGGATT+TGG + chr4_4:22022154-22022173 Msa0674560:CDS 45.0%
TCTTTCCAGACAGGATTTGG+AGG + chr4_4:22022157-22022176 Msa0674560:CDS 45.0%
CTTGCTGGATGGCATAATGA+GGG - chr4_4:22022216-22022235 None:intergenic 45.0%
CTCATTATGCCATCCAGCAA+GGG + chr4_4:22022215-22022234 Msa0674560:CDS 45.0%
! ATAAGGTATCCCTTGCTGGA+TGG - chr4_4:22022227-22022246 None:intergenic 45.0%
! TTATGAGTTGGCATTGCACG+TGG - chr4_4:22022366-22022385 None:intergenic 45.0%
GCCAGATTACAGTTACCCTA+CGG + chr4_4:22023396-22023415 Msa0674560:CDS 45.0%
ACCGTAGGGTAACTGTAATC+TGG - chr4_4:22023400-22023419 None:intergenic 45.0%
TGGCTGAATCGGTAGAGTTA+AGG - chr4_4:22024293-22024312 None:intergenic 45.0%
! AGGTGATGGCCCACAAATAT+AGG + chr4_4:22024882-22024901 Msa0674560:intron 45.0%
TTGTACCCTACAGAATGTGG+GGG + chr4_4:22024986-22025005 Msa0674560:intron 45.0%
CACTATAGCAAGCAGTGGAT+TGG - chr4_4:22025251-22025270 None:intergenic 45.0%
!! CAATCCACTGCTTGCTATAG+TGG + chr4_4:22025249-22025268 Msa0674560:intron 45.0%
TAAAAGACACCACCAAAGGG+TGG + chr4_4:22025853-22025872 Msa0674560:intron 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr4_4:22025853-22025872 None:intergenic 45.0%
AGCTACTATGGTATGTACGG+TGG + chr4_4:22026866-22026885 Msa0674560:CDS 45.0%
GCTACTATGGTATGTACGGT+GGG + chr4_4:22026867-22026886 Msa0674560:CDS 45.0%
CTACTATGGTATGTACGGTG+GGG + chr4_4:22026868-22026887 Msa0674560:CDS 45.0%
ACAGCACAGTACCCTGTTTA+TGG + chr4_4:22026893-22026912 Msa0674560:CDS 45.0%
GCTGGTCCATTTCCATAAAC+AGG - chr4_4:22026908-22026927 None:intergenic 45.0%
GTTTATGGAAATGGACCAGC+TGG + chr4_4:22026908-22026927 Msa0674560:CDS 45.0%
CTTCAATATGGCGAAGGAAC+CGG + chr4_4:22026977-22026996 Msa0674560:CDS 45.0%
TACACTTCTGGCCAAGGTTA+TGG + chr4_4:22027019-22027038 Msa0674560:CDS 45.0%
TCTCCAATTGCTTCAACTGG+TGG + chr4_4:22027073-22027092 Msa0674560:CDS 45.0%
CTCCAATTGCTTCAACTGGT+GGG + chr4_4:22027074-22027093 Msa0674560:CDS 45.0%
TACCCACCAGTTGAAGCAAT+TGG - chr4_4:22027079-22027098 None:intergenic 45.0%
! GGAGAAGGTGCAAGAGAAAT+GGG - chr4_4:22027121-22027140 None:intergenic 45.0%
! AGGAGAAGGTGCAAGAGAAA+TGG - chr4_4:22027122-22027141 None:intergenic 45.0%
!! CTATCGAGATTTGGCTTGAC+GGG + chr4_4:22027524-22027543 Msa0674560:intron 45.0%
GTGTGATGAGAGAAACACCA+TGG - chr4_4:22027836-22027855 None:intergenic 45.0%
! GGGCCTATGATAATGATGAG+TGG - chr4_4:22027919-22027938 None:intergenic 45.0%
ATTATCATAGGCCCCCCATA+GGG + chr4_4:22027925-22027944 Msa0674560:three_prime_UTR 45.0%
ACTTTCCTCTTCATCCAGAG+AGG - chr4_4:22028315-22028334 None:intergenic 45.0%
AGTCATCTTCCCTTTGGGTA+AGG + chr4_4:22028477-22028496 Msa0674560:three_prime_UTR 45.0%
GTCATCTTCCCTTTGGGTAA+GGG + chr4_4:22028478-22028497 Msa0674560:three_prime_UTR 45.0%
TCATCTTCCCTTTGGGTAAG+GGG + chr4_4:22028479-22028498 Msa0674560:three_prime_UTR 45.0%
! CTTTTTCTCCCCTTACCCAA+AGG - chr4_4:22028490-22028509 None:intergenic 45.0%
TTCACTTTGCTCACCAACCA+TGG + chr4_4:22028734-22028753 Msa0674560:three_prime_UTR 45.0%
TTTGCTCACCAACCATGGTT+AGG + chr4_4:22028739-22028758 Msa0674560:three_prime_UTR 45.0%
ACCAACCATGGTTAGGACAT+AGG + chr4_4:22028746-22028765 Msa0674560:three_prime_UTR 45.0%
ACCTATGTCCTAACCATGGT+TGG - chr4_4:22028750-22028769 None:intergenic 45.0%
CATTCTCTGCTGGATGAGAA+TGG + chr4_4:22028972-22028991 Msa0674560:three_prime_UTR 45.0%
!! AAAATAAAAAAAAAACAAAA+TGG - chr4_4:22020592-22020611 None:intergenic 5.0%
!!! TTTTGTTTTTTTTTTATTTT+TGG + chr4_4:22020592-22020611 Msa0674560:intron 5.0%
!! ATTATAGATAAAATATAAAA+GGG - chr4_4:22021976-22021995 None:intergenic 5.0%
!! TATTATAGATAAAATATAAA+AGG - chr4_4:22021977-22021996 None:intergenic 5.0%
!! TAAAATTTAAATTAATCAAA+TGG - chr4_4:22023919-22023938 None:intergenic 5.0%
!! ATTAATTTATTAATATTTGT+TGG + chr4_4:22024227-22024246 Msa0674560:intron 5.0%
!! TTAATTTATTAATATTTGTT+GGG + chr4_4:22024228-22024247 Msa0674560:intron 5.0%
!!! TCAATATTTTTTTTTTAAAT+CGG - chr4_4:22024557-22024576 None:intergenic 5.0%
!! TTACTAAAAAAATAATTAAA+TGG + chr4_4:22024734-22024753 Msa0674560:intron 5.0%
!!! AAATTAATTTTCATAAAAAA+GGG + chr4_4:22028435-22028454 Msa0674560:three_prime_UTR 5.0%
TAATGCAAACTGGTGGGGTG+GGG + chr4_4:22019687-22019706 Msa0674560:five_prime_UTR 50.0%
GAGAGAGAGAGAGAATTGGG+AGG - chr4_4:22019789-22019808 None:intergenic 50.0%
CAAGCTCTCATAGCAGCATC+AGG - chr4_4:22020687-22020706 None:intergenic 50.0%
TGCTGCTATGAGAGCTTGTG+TGG + chr4_4:22020689-22020708 Msa0674560:CDS 50.0%
AATTTGTAGGAGGAGGAGGG+AGG + chr4_4:22022116-22022135 Msa0674560:intron 50.0%
AGGAGGAGGGAGGAACATTA+GGG + chr4_4:22022126-22022145 Msa0674560:CDS 50.0%
CAGACAGGATTTGGAGGAGT+GGG + chr4_4:22022163-22022182 Msa0674560:CDS 50.0%
CTGGATGGCATAATGAGGGA+AGG - chr4_4:22022212-22022231 None:intergenic 50.0%
CCTTGCTGGATGGCATAATG+AGG - chr4_4:22022217-22022236 None:intergenic 50.0%
CCTCATTATGCCATCCAGCA+AGG + chr4_4:22022214-22022233 Msa0674560:CDS 50.0%
AGTTACATCAAGGGGCCATG+TGG - chr4_4:22022518-22022537 None:intergenic 50.0%
GTTCACCCCCACATTCTGTA+GGG - chr4_4:22024994-22025013 None:intergenic 50.0%
AGGACCACTATAGCAAGCAG+TGG - chr4_4:22025256-22025275 None:intergenic 50.0%
TCTTGCTACAAGCCACCCTT+TGG - chr4_4:22025994-22026013 None:intergenic 50.0%
TCTTGCTACAAGCCACCCTT+TGG + chr4_4:22025994-22026013 Msa0674560:intron 50.0%
TATGGAAATGGACCAGCTGG+AGG + chr4_4:22026911-22026930 Msa0674560:CDS 50.0%
ATGGAAATGGACCAGCTGGA+GGG + chr4_4:22026912-22026931 Msa0674560:CDS 50.0%
! TGGTGTTAACTACCCACCTC+AGG + chr4_4:22027039-22027058 Msa0674560:CDS 50.0%
!! AGTGTGTTTTGCTGTGCCAC+AGG + chr4_4:22027672-22027691 Msa0674560:intron 50.0%
CATTATCATAGGCCCCCCAT+AGG + chr4_4:22027924-22027943 Msa0674560:three_prime_UTR 50.0%
TTATCATAGGCCCCCCATAG+GGG + chr4_4:22027926-22027945 Msa0674560:three_prime_UTR 50.0%
TCACACCTCTCTGGATGAAG+AGG + chr4_4:22028307-22028326 Msa0674560:three_prime_UTR 50.0%
GGGAACCCAAATATCTCCCA+AGG - chr4_4:22028706-22028725 None:intergenic 50.0%
! GGGAGATATTTGGGTTCCCT+TGG + chr4_4:22028707-22028726 Msa0674560:three_prime_UTR 50.0%
AATGCAAACTGGTGGGGTGG+GGG + chr4_4:22019688-22019707 Msa0674560:five_prime_UTR 55.0%
GAGGAGGAGGGAGGAACATT+AGG + chr4_4:22022125-22022144 Msa0674560:CDS 55.0%
CCACTCCTCCAAATCCTGTC+TGG - chr4_4:22022165-22022184 None:intergenic 55.0%
CCAGACAGGATTTGGAGGAG+TGG + chr4_4:22022162-22022181 Msa0674560:CDS 55.0%
TGAGGGAAGGTTGCAGCTGA+AGG - chr4_4:22022199-22022218 None:intergenic 55.0%
GCAAGGCATGCTTGCTTGCT+TGG - chr4_4:22022443-22022462 None:intergenic 55.0%
TCAAGGGGCCATGTGGAATC+AGG - chr4_4:22022511-22022530 None:intergenic 55.0%
CGTTCACCCCCACATTCTGT+AGG - chr4_4:22024995-22025014 None:intergenic 55.0%
ACAGAATGTGGGGGTGAACG+TGG + chr4_4:22024995-22025014 Msa0674560:intron 55.0%
TGGGGGTGAACGTGGTAAGT+CGG + chr4_4:22025003-22025022 Msa0674560:intron 55.0%
TGCTACAAGCCACCCTTTGG+TGG - chr4_4:22025997-22026016 None:intergenic 55.0%
TGCTACAAGCCACCCTTTGG+TGG + chr4_4:22025997-22026016 Msa0674560:intron 55.0%
CAATATGGCGAAGGAACCGG+CGG + chr4_4:22026980-22026999 Msa0674560:CDS 55.0%
GGTGGGTATGCTCAGCACTA+TGG + chr4_4:22027091-22027110 Msa0674560:CDS 55.0%
AAACCTGATGGCAAGGCAGC+AGG - chr4_4:22027142-22027161 None:intergenic 55.0%
TAGAGCCATTGTCACGCCTG+TGG - chr4_4:22027691-22027710 None:intergenic 55.0%
AAACCTTTGGGCCCCTATGG+GGG - chr4_4:22027940-22027959 None:intergenic 55.0%
GAAACCTTTGGGCCCCTATG+GGG - chr4_4:22027941-22027960 None:intergenic 55.0%
GGAAACCTTTGGGCCCCTAT+GGG - chr4_4:22027942-22027961 None:intergenic 55.0%
AGGAAACCTTTGGGCCCCTA+TGG - chr4_4:22027943-22027962 None:intergenic 55.0%
CCAGTCATCATCCCTCCAGC+TGG - chr4_4:22026926-22026945 None:intergenic 60.0%
CCAGCTGGAGGGATGATGAC+TGG + chr4_4:22026923-22026942 Msa0674560:CDS 60.0%
GCTGGAGGGATGATGACTGG+TGG + chr4_4:22026926-22026945 Msa0674560:CDS 60.0%
ACTACCGGCGGCTACACTTC+TGG + chr4_4:22027007-22027026 Msa0674560:CDS 60.0%
! TTGGCCAGAAGTGTAGCCGC+CGG - chr4_4:22027014-22027033 None:intergenic 60.0%
GATGGCAAGGCAGCAGGAGA+AGG - chr4_4:22027136-22027155 None:intergenic 60.0%
TCTCCTGCTGCCTTGCCATC+AGG + chr4_4:22027136-22027155 Msa0674560:CDS 60.0%
CTGTGCCACAGGCGTGACAA+TGG + chr4_4:22027683-22027702 Msa0674560:intron 60.0%
AACCTTTGGGCCCCTATGGG+GGG - chr4_4:22027939-22027958 None:intergenic 60.0%
GGCGGCTACACTTCTGGCCA+AGG + chr4_4:22027013-22027032 Msa0674560:CDS 65.0%
GGAACCGGCGGCGCAACTAC+CGG + chr4_4:22026992-22027011 Msa0674560:CDS 70.0%
ACCGGCGGCGCAACTACCGG+CGG + chr4_4:22026995-22027014 Msa0674560:CDS 75.0%
GGCCCCCCATAGGGGCCCAA+AGG + chr4_4:22027934-22027953 Msa0674560:three_prime_UTR 75.0%
! GCCGCCGGTAGTTGCGCCGC+CGG - chr4_4:22026999-22027018 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 22019641 22029123 22019641 ID=Msa0674560;Name=Msa0674560
chr4_4 mRNA 22019641 22029123 22019641 ID=Msa0674560-mRNA-1;Parent=Msa0674560;Name=Msa0674560-mRNA-1;_AED=0.02;_eAED=0.02;_QI=433|1|1|1|1|1|6|1389|272
chr4_4 exon 22019641 22020256 22019641 ID=Msa0674560-mRNA-1:exon:6263;Parent=Msa0674560-mRNA-1
chr4_4 exon 22020669 22020801 22020669 ID=Msa0674560-mRNA-1:exon:6264;Parent=Msa0674560-mRNA-1
chr4_4 exon 22022125 22022257 22022125 ID=Msa0674560-mRNA-1:exon:6265;Parent=Msa0674560-mRNA-1
chr4_4 exon 22023381 22023417 22023381 ID=Msa0674560-mRNA-1:exon:6266;Parent=Msa0674560-mRNA-1
chr4_4 exon 22026866 22027157 22026866 ID=Msa0674560-mRNA-1:exon:6267;Parent=Msa0674560-mRNA-1
chr4_4 exon 22027694 22029123 22027694 ID=Msa0674560-mRNA-1:exon:6268;Parent=Msa0674560-mRNA-1
chr4_4 five_prime_UTR 22019641 22020073 22019641 ID=Msa0674560-mRNA-1:five_prime_utr;Parent=Msa0674560-mRNA-1
chr4_4 CDS 22020074 22020256 22020074 ID=Msa0674560-mRNA-1:cds;Parent=Msa0674560-mRNA-1
chr4_4 CDS 22020669 22020801 22020669 ID=Msa0674560-mRNA-1:cds;Parent=Msa0674560-mRNA-1
chr4_4 CDS 22022125 22022257 22022125 ID=Msa0674560-mRNA-1:cds;Parent=Msa0674560-mRNA-1
chr4_4 CDS 22023381 22023417 22023381 ID=Msa0674560-mRNA-1:cds;Parent=Msa0674560-mRNA-1
chr4_4 CDS 22026866 22027157 22026866 ID=Msa0674560-mRNA-1:cds;Parent=Msa0674560-mRNA-1
chr4_4 CDS 22027694 22027734 22027694 ID=Msa0674560-mRNA-1:cds;Parent=Msa0674560-mRNA-1
chr4_4 three_prime_UTR 22027735 22029123 22027735 ID=Msa0674560-mRNA-1:three_prime_utr;Parent=Msa0674560-mRNA-1
Gene Sequence

>Msa0674560

ATGACTCCAATTAATTTGGCAGGACAATTTGGTGACACAACATACACCAAAGTTTTTGTTGGAGGATTGGCTTGGGAAACTCAAAAAGAGACTATGAAGAAATATTTTGAGCAATTTGGTGAGATCTTGGAAGCTGTTGTTATCACTGACAAAGCCACTGGAAGATCCAAAGGCTATGGATTTGTCACTTTTCGTGAACCTGATGCTGCTATGAGAGCTTGTGTGGATGCTGCTCCTATAATTGATGGTAGAAGAGCCAACTGCAACCTTGCTTCTTTGGGTGTCCAAAGATCTAAGCCTTCAACACCAAAACATGGAGGAGGAGGGAGGAACATTAGGGTAATGGGTTCTTTCCAGACAGGATTTGGAGGAGTGGGATCAGCTTTTCCTTCAGCTGCAACCTTCCCTCATTATGCCATCCAGCAAGGGATACCTTATAATGTTTATGGGTACTCTTCTTACTCGCCAGATTACAGTTACCCTACGAGCTACTATGGTATGTACGGTGGGGCAACAGCACAGTACCCTGTTTATGGAAATGGACCAGCTGGAGGGATGATGACTGGTGGTGCAGCAGCAGCAGCCTACTATCCATATCTTCAATATGGCGAAGGAACCGGCGGCGCAACTACCGGCGGCTACACTTCTGGCCAAGGTTATGGTGTTAACTACCCACCTCAGGTGTTTCAATATTCTCCAATTGCTTCAACTGGTGGGTATGCTCAGCACTATGGAACACCCATTTCTCTTGCACCTTCTCCTGCTGCCTTGCCATCAGGCGTGACAATGGCTCTACAAGCTCCAATTCCTCATCGTTAG
Protein sequence

>Msa0674560

MTPINLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPIIDGRRANCNLASLGVQRSKPSTPKHGGGGRNIRVMGSFQTGFGGVGSAFPSAATFPHYAIQQGIPYNVYGYSSYSPDYSYPTSYYGMYGGATAQYPVYGNGPAGGMMTGGAAAAAYYPYLQYGEGTGGATTGGYTSGQGYGVNYPPQVFQYSPIASTGGYAQHYGTPISLAPSPAALPSGVTMALQAPIPHR*