AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0809760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809760 MtrunA17_Chr5g0425431 96.026 780 30 1 1 779 1 780 0.0 1554
Msa0809760 MtrunA17_Chr5g0425451 93.862 782 45 1 1 779 1 782 0.0 1500
Msa0809760 MtrunA17_Chr5g0425471 90.793 782 69 1 1 779 1 782 0.0 1453
Msa0809760 MtrunA17_Chr5g0425531 83.822 785 121 3 1 779 1 785 0.0 1343
Msa0809760 MtrunA17_Chr3g0115601 70.065 775 223 4 6 779 10 776 0.0 1170
Msa0809760 MtrunA17_Chr5g0411571 49.000 800 366 12 1 779 4 782 0.0 781
Msa0809760 MtrunA17_Chr1g0207281 50.067 751 358 12 27 769 34 775 0.0 745
Msa0809760 MtrunA17_Chr2g0278761 48.545 756 360 12 33 779 40 775 0.0 726
Msa0809760 MtrunA17_Chr2g0294751 46.675 782 384 14 1 777 1 754 0.0 724
Msa0809760 MtrunA17_Chr7g0269871 47.410 753 369 12 33 777 28 761 0.0 723
Msa0809760 MtrunA17_Chr1g0194841 46.401 778 387 10 5 777 3 755 0.0 722
Msa0809760 MtrunA17_Chr4g0050591 46.105 783 394 13 5 779 12 774 0.0 709
Msa0809760 MtrunA17_Chr6g0461231 27.653 669 357 30 33 635 14 621 4.84e-43 166
Msa0809760 MtrunA17_Chr6g0461191 27.736 667 355 29 35 635 16 621 8.00e-43 165
Msa0809760 MtrunA17_Chr3g0118971 27.015 670 364 29 37 641 18 627 6.99e-41 159
Msa0809760 MtrunA17_Chr2g0292341 27.778 630 330 26 54 610 37 614 7.41e-41 159
Msa0809760 MtrunA17_Chr3g0104081 27.197 603 347 22 47 592 22 589 1.24e-40 158
Msa0809760 MtrunA17_Chr6g0461221 26.339 672 370 28 33 639 15 626 7.84e-39 154
Msa0809760 MtrunA17_Chr6g0461211 27.821 647 342 29 54 635 35 621 8.14e-39 153
Msa0809760 MtrunA17_Chr7g0253561 27.395 668 332 30 47 635 4 597 8.48e-38 149
Msa0809760 MtrunA17_Chr5g0429581 25.914 602 353 22 49 592 7 573 6.12e-37 147
Msa0809760 MtrunA17_Chr5g0429541 25.507 592 344 21 54 592 12 559 4.21e-33 135
Msa0809760 MtrunA17_Chr7g0253551 27.517 447 232 20 44 433 26 437 5.48e-26 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0809760 AT1G78060.1 63.479 753 264 7 31 779 22 767 0.0 1011
Msa0809760 AT5G10560.1 50.585 769 352 9 31 777 28 790 0.0 790
Msa0809760 AT3G19620.1 50.602 747 344 14 33 769 27 758 0.0 752
Msa0809760 AT5G09730.1 48.271 781 383 14 4 779 9 773 0.0 730
Msa0809760 AT5G64570.1 48.342 784 377 13 5 779 20 784 0.0 728
Msa0809760 AT1G02640.1 46.008 789 381 13 1 777 3 758 0.0 715
Msa0809760 AT5G49360.1 46.803 782 381 17 6 777 14 770 0.0 699
Msa0809760 AT5G64570.3 51.795 585 268 9 5 587 20 592 0.0 604
Msa0809760 AT5G64570.2 48.362 641 308 11 147 779 1 626 0.0 596
Msa0809760 AT5G09700.1 44.376 489 259 7 297 779 45 526 5.71e-133 405
Msa0809760 AT3G47040.4 26.502 649 369 26 47 638 10 607 9.63e-42 162
Msa0809760 AT3G47000.1 25.723 657 358 26 47 635 10 604 2.81e-39 154
Msa0809760 AT3G47040.1 25.676 666 378 27 47 638 10 632 4.78e-39 154
Msa0809760 AT5G04885.3 26.164 623 358 25 53 614 36 617 8.13e-39 154
Msa0809760 AT5G04885.1 26.164 623 358 25 53 614 36 617 8.13e-39 154
Msa0809760 AT5G04885.2 26.164 623 358 25 53 614 53 634 1.13e-38 154
Msa0809760 AT3G47010.1 26.087 621 367 26 47 610 11 596 5.21e-38 150
Msa0809760 AT3G47050.1 26.264 613 351 23 43 594 6 578 5.76e-37 147
Msa0809760 AT3G47010.2 25.843 623 365 28 47 610 11 595 3.44e-36 145
Msa0809760 AT5G20950.2 29.017 417 219 17 57 421 36 427 1.92e-33 137
Msa0809760 AT5G20950.1 29.017 417 219 17 57 421 36 427 1.92e-33 137
Msa0809760 AT3G62710.1 27.023 618 335 29 59 634 105 648 3.08e-33 137
Msa0809760 AT5G20950.3 29.017 417 219 17 57 421 114 505 3.91e-33 137
Msa0809760 AT5G20940.1 28.369 423 239 16 57 433 42 446 6.92e-32 132
Msa0809760 AT3G47040.3 29.263 434 242 16 47 433 10 425 4.09e-31 127
Msa0809760 AT3G47000.3 28.241 432 224 16 47 421 10 412 2.54e-30 125
Msa0809760 AT3G47010.4 27.189 434 251 17 47 433 11 426 7.36e-28 118
Msa0809760 AT3G47000.2 25.054 467 286 19 191 635 3 427 4.78e-25 109
Msa0809760 AT3G47010.3 25.734 443 274 21 193 610 5 417 7.08e-25 108
Msa0809760 AT3G47050.2 26.330 376 217 13 43 374 6 365 2.13e-22 100

Find 202 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAACTATTGATGATTTAT+TGG 0.145046 5_3:+37008457 None:intergenic
AATAAGTGATTATGTTATTT+TGG 0.156153 5_3:-37008285 Msa0809760:CDS
CACCAAACATAAACATATTT+AGG 0.158019 5_3:-37011039 Msa0809760:CDS
TTCTAAGAAGCCTGTTATTT+TGG 0.174390 5_3:-37008162 Msa0809760:CDS
CTGCCTATGATTTGGAAAAT+TGG 0.179123 5_3:-37010856 Msa0809760:CDS
GCTAAGAATAATGACAAAAT+TGG 0.212120 5_3:-37008104 Msa0809760:CDS
TTTGAAGGTGGAAAACTAAT+TGG 0.218848 5_3:-37010917 Msa0809760:CDS
TTTCCATTTCTACCTTTCTT+TGG 0.223144 5_3:+37006775 None:intergenic
TCAGGTTACTTTACAAGATT+TGG 0.243170 5_3:-37010413 Msa0809760:intron
TTGATGATTTATTGGCATTA+GGG 0.250324 5_3:+37008465 None:intergenic
TCTTGTCCTCTTCCCCATCT+TGG 0.274411 5_3:+37011013 None:intergenic
AAACAAGTATCCATATTAAA+AGG 0.276787 5_3:-37008407 Msa0809760:CDS
ACACTTTACTGCCTATGATT+TGG 0.277559 5_3:-37010864 Msa0809760:CDS
GTAAATACCCTTGGAGTTAT+AGG 0.279725 5_3:-37008488 Msa0809760:CDS
ACAAAATTGGAGGCATCATT+TGG 0.281644 5_3:-37008091 Msa0809760:CDS
ACTGATTCGGTACCAAAGTT+TGG 0.290827 5_3:+37011632 None:intergenic
ATTGATGATTTATTGGCATT+AGG 0.294469 5_3:+37008464 None:intergenic
TTCGACCAATTCTGCCATAT+TGG 0.299165 5_3:+37008612 None:intergenic
CTTGTCCTCTTCCCCATCTT+GGG 0.306397 5_3:+37011014 None:intergenic
TATGTAATGGAAAGCTTGAT+TGG 0.321978 5_3:-37006470 Msa0809760:three_prime_UTR
GGAGGTGGAAAGGGTGAAGT+TGG 0.339877 5_3:-37006709 Msa0809760:CDS
TACAAACTTGTTTCAGAGTT+AGG 0.340365 5_3:-37006895 Msa0809760:CDS
CACAATATTACCAAAATAAC+AGG 0.345691 5_3:+37008152 None:intergenic
CTGATTCGGTACCAAAGTTT+GGG 0.355066 5_3:+37011633 None:intergenic
CCTTTGGTAAATTCAAAGTA+TGG 0.359897 5_3:-37010974 Msa0809760:CDS
CGGTGTTTCTTATGTTGGTA+AGG 0.366894 5_3:-37011730 Msa0809760:CDS
ATGCATATTAATTTACTCAT+TGG 0.369435 5_3:+37006352 None:intergenic
CTTCAAGGGGATTCCTTTGA+AGG 0.369539 5_3:-37010932 Msa0809760:CDS
TCCCTAAATATGTTTATGTT+TGG 0.371836 5_3:+37011037 None:intergenic
CATGTCCATTTCTGTAACAT+TGG 0.372834 5_3:-37006854 Msa0809760:CDS
AATTCTGCCATATTGGAGTT+TGG 0.374442 5_3:+37008619 None:intergenic
AGCCAGACACATTATCGTTC+TGG 0.377925 5_3:-37008368 Msa0809760:CDS
AAGTAATGGTGATGGAAAAT+TGG 0.378794 5_3:+37012015 None:intergenic
ATCATTTGGGCTGGTTATCC+TGG 0.383440 5_3:-37008077 Msa0809760:CDS
GCTGGTTATCCTGGTGAAAC+TGG 0.384326 5_3:-37008068 Msa0809760:CDS
ACAAATGCTGGAAGCATGGC+TGG 0.385284 5_3:-37006826 Msa0809760:CDS
GGTCCAAAGGTCTACGAATT+CGG 0.387773 5_3:-37007033 Msa0809760:CDS
TTTGACGGAAATGAAGTTGT+AGG 0.388452 5_3:+37006984 None:intergenic
AAACTCCAATATGGCAGAAT+TGG 0.392051 5_3:-37008617 Msa0809760:CDS
AATTCCCAATGTTACAGAAA+TGG 0.398418 5_3:+37006849 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5_3:-37011038 Msa0809760:CDS
AGATTGTAATCTGCACAGTT+TGG 0.398988 5_3:+37010301 None:intergenic
TGGTGGAAGGGCTCTGGCTC+AGG 0.399913 5_3:-37008048 Msa0809760:CDS
AGGAATAATTTGAGTAGCTT+AGG 0.401616 5_3:+37007004 None:intergenic
CAAGCCTAGTCTTATTCTAA+TGG 0.403894 5_3:+37008658 None:intergenic
GCTCTGGCTCAGGTTGTGTT+TGG 0.406314 5_3:-37008038 Msa0809760:CDS
TAGCCGAATTCGTAGACCTT+TGG 0.407677 5_3:+37007030 None:intergenic
GCACGGTCGATTTGAGATAT+AGG 0.407692 5_3:+37008698 None:intergenic
AATCCAACCAAACTCCAATA+TGG 0.414409 5_3:-37008626 Msa0809760:CDS
ACTCCAAGGGTATTTACTCT+TGG 0.414446 5_3:+37008494 None:intergenic
AACCCTACCAACTGTTTCAC+TGG 0.418928 5_3:+37006751 None:intergenic
AGGTGGTTATTTGTTGGTTG+TGG 0.420306 5_3:-37006620 Msa0809760:CDS
ATAAGTTTCTGTTGCTTACC+AGG 0.420753 5_3:+37008203 None:intergenic
ATCAAGTAAAGAATAACTAA+TGG 0.425783 5_3:-37006528 Msa0809760:three_prime_UTR
ATAAGACTAGGCTTGTTTGA+TGG 0.425928 5_3:-37008650 Msa0809760:CDS
TGAAACTGGTGGAAGGGCTC+TGG 0.429489 5_3:-37008054 Msa0809760:CDS
CAGCTTCAAGAGCAAGGTCT+AGG 0.436293 5_3:+37008567 None:intergenic
GAGTAAGGAGGTACATTAAT+CGG 0.436987 5_3:+37011942 None:intergenic
AAGCCAAAGAAAGGTAGAAA+TGG 0.439382 5_3:-37006778 Msa0809760:CDS
CAAAATTGGAGGCATCATTT+GGG 0.439628 5_3:-37008090 Msa0809760:CDS
CTCATTCTCATGTCTGTCAT+TGG 0.443342 5_3:+37007105 None:intergenic
TTTGAGAGTGTGACGGTGGA+AGG 0.447503 5_3:-37006730 Msa0809760:CDS
TTTCCCTCAAATCATTCTTA+CGG 0.448886 5_3:-37011670 Msa0809760:CDS
TGAAGAAGGTGGTTATTTGT+TGG 0.451987 5_3:-37006626 Msa0809760:CDS
GAGGTGGAAAGGGTGAAGTT+GGG 0.452463 5_3:-37006708 Msa0809760:CDS
GTGTTTGGTGACTATAACCC+TGG 0.452505 5_3:-37008023 Msa0809760:intron
ATGTCCATTTCTGTAACATT+GGG 0.459363 5_3:-37006853 Msa0809760:CDS
AGTTACTGACCTTACTGATT+CGG 0.462510 5_3:+37011619 None:intergenic
TAAGACTAGGCTTGTTTGAT+GGG 0.462964 5_3:-37008649 Msa0809760:CDS
ATATGACTCTACTTATGTAA+TGG 0.464666 5_3:-37006483 Msa0809760:three_prime_UTR
ACATATTTAGGGACCCAAGA+TGG 0.464899 5_3:-37011027 Msa0809760:CDS
AACAGCTGGAGAAGATCCTT+TGG 0.465307 5_3:-37010990 Msa0809760:CDS
TTAGCAAAAGTAATATCAAC+AGG 0.467973 5_3:+37008122 None:intergenic
TGGCTCTTTGAGTGATGGTA+AGG 0.468209 5_3:+37011868 None:intergenic
ACGGTGGAAGGAGGTGGAAA+GGG 0.469710 5_3:-37006718 Msa0809760:CDS
CTGCCATATTGGAGTTTGGT+TGG 0.470820 5_3:+37008623 None:intergenic
TTATTTGTTGGTTGTGGGAG+AGG 0.471909 5_3:-37006614 Msa0809760:CDS
TCTTATGTGAGAGGACTTCA+AGG 0.477524 5_3:-37010947 Msa0809760:CDS
TTGCACGGTGTTTCTTATGT+TGG 0.479426 5_3:-37011735 Msa0809760:CDS
CATATTTAGGGACCCAAGAT+GGG 0.480274 5_3:-37011026 Msa0809760:CDS
GAGCCGTGACACAATGTCTT+TGG 0.481669 5_3:+37011848 None:intergenic
AATATGGATACTTGTTTACA+AGG 0.482332 5_3:+37008413 None:intergenic
GTGTTTCCGTCTCTTGACTT+TGG 0.484702 5_3:+37008249 None:intergenic
GGTAAGGTTGACATTGCAAA+AGG 0.485767 5_3:+37011884 None:intergenic
AGGTACATTAATCGGTGAAT+CGG 0.490401 5_3:+37011950 None:intergenic
GGTGGTTATTTGTTGGTTGT+GGG 0.491601 5_3:-37006619 Msa0809760:CDS
ATCCAGAACGATAATGTGTC+TGG 0.493072 5_3:+37008366 None:intergenic
AGGGTATTTACTCTTGGAAG+TGG 0.494590 5_3:+37008500 None:intergenic
ACATTGGGAATTACAAATGC+TGG 0.494745 5_3:-37006838 Msa0809760:CDS
GTTGTATGAATGAAGGTGAT+TGG 0.496646 5_3:-37011118 Msa0809760:intron
CTTAATATGAGACGGAGGAT+AGG 0.499315 5_3:+37006408 None:intergenic
GGTGTTTCTTATGTTGGTAA+GGG 0.501707 5_3:-37011729 Msa0809760:CDS
TCAGGGATGGATTTAGAGTG+TGG 0.502121 5_3:-37008770 Msa0809760:intron
CTGTTTGTGAAGCCAAAGAA+AGG 0.504938 5_3:-37006787 Msa0809760:CDS
GTCTTTGGCTCTTTGAGTGA+TGG 0.506861 5_3:+37011863 None:intergenic
GACGGTGGAAGGAGGTGGAA+AGG 0.507657 5_3:-37006719 Msa0809760:CDS
GGTAAGGGGATAAGATTGAA+TGG 0.507764 5_3:-37011714 Msa0809760:CDS
ATGAGAGCTGATCCATCATC+AGG 0.511303 5_3:-37007087 Msa0809760:CDS
TTGGAGATGTCACAGGAGTA+AGG 0.511401 5_3:+37011927 None:intergenic
GTAGAAACGGTAGGTTCTAC+CGG 0.511605 5_3:+37007059 None:intergenic
CGGTATACCGAGTCGAGGAA+TGG 0.513844 5_3:+37011782 None:intergenic
ACATCAGCTACAACATCCTC+TGG 0.517153 5_3:+37009783 None:intergenic
CTACCGGGATAGCCTGATGA+TGG 0.517596 5_3:+37007075 None:intergenic
GAAGGTGGAAAACTAATTGG+AGG 0.518493 5_3:-37010914 Msa0809760:CDS
TGGTTGACTGGTTGATGTGA+AGG 0.523221 5_3:+37006953 None:intergenic
TTCTTGCAGCTTCAAGAGCA+AGG 0.526483 5_3:+37008561 None:intergenic
GGTTACTTTACAAGATTTGG+CGG 0.526554 5_3:-37010410 Msa0809760:CDS
TGTGCTTACAACCGTGTCAA+TGG 0.530376 5_3:-37010328 Msa0809760:CDS
TATCGTTCTGGATGTACTGA+TGG 0.530389 5_3:-37008356 Msa0809760:CDS
AAGAATAATGACAAAATTGG+AGG 0.530513 5_3:-37008101 Msa0809760:CDS
GCTAGAGGAGTGTACAATGC+TGG 0.534160 5_3:-37011088 Msa0809760:CDS
ATACCGAGTCGAGGAATGGC+AGG 0.534851 5_3:+37011786 None:intergenic
ATTGGAGGCATCATTTGGGC+TGG 0.536363 5_3:-37008086 Msa0809760:CDS
CAAGGGGATTCCTTTGAAGG+TGG 0.536841 5_3:-37010929 Msa0809760:CDS
CAGCCGTAAGAATGATTTGA+GGG 0.537119 5_3:+37011667 None:intergenic
TCTTGGAAGTGGGAGAATTG+AGG 0.537861 5_3:+37008511 None:intergenic
TTAATATGAGACGGAGGATA+GGG 0.539045 5_3:+37006409 None:intergenic
AAGGTCTACGAATTCGGCTA+TGG 0.539382 5_3:-37007027 Msa0809760:CDS
CCTTTGGACCTGTGTAGAAA+CGG 0.540578 5_3:+37007046 None:intergenic
ATCCAGTGAAACAGTTGGTA+GGG 0.542668 5_3:-37006753 Msa0809760:CDS
GATCCATCATCAGGCTATCC+CGG 0.542828 5_3:-37007078 Msa0809760:CDS
GCATAAATCCCCTCACAGCA+TGG 0.543300 5_3:-37012039 Msa0809760:exon
GGCTTCACAAACAGCAACAC+AGG 0.545539 5_3:+37006796 None:intergenic
CTATGATTTGGAAAATTGGA+AGG 0.547121 5_3:-37010852 Msa0809760:CDS
GGTGTCAAGGTGGTTGAAGA+AGG 0.548262 5_3:-37006640 Msa0809760:CDS
TACAATGCTGGACAAGCTCA+AGG 0.548478 5_3:-37011076 Msa0809760:CDS
CTTCCAAGAGTAAATACCCT+TGG 0.550798 5_3:-37008497 Msa0809760:CDS
CAATGTTACAGAAATGGACA+TGG 0.553553 5_3:+37006855 None:intergenic
AGAGTTCATTTAGAGTTACC+TGG 0.556126 5_3:-37008221 Msa0809760:CDS
GCCCTTCCACCAGTTTCACC+AGG 0.557917 5_3:+37008059 None:intergenic
GGAAGAGGACAAGAAACAGC+TGG 0.558668 5_3:-37011004 Msa0809760:CDS
AATCCAGTGAAACAGTTGGT+AGG 0.561271 5_3:-37006754 Msa0809760:CDS
GTGAATCGGCATGAACGAGT+TGG 0.561862 5_3:+37011964 None:intergenic
GTGTTTCTTATGTTGGTAAG+GGG 0.562805 5_3:-37011728 Msa0809760:CDS
AGGGACCCAAGATGGGGAAG+AGG 0.563005 5_3:-37011019 Msa0809760:CDS
TCGGTATACCGAGTTATCAA+TGG 0.563582 5_3:-37011770 Msa0809760:CDS
AATGGTAAACAGATTGTGTA+GGG 0.564507 5_3:+37008676 None:intergenic
TCATTCCACCATTGATAACT+CGG 0.565942 5_3:+37011762 None:intergenic
CCATACTTTGAATTTACCAA+AGG 0.567024 5_3:+37010974 None:intergenic
TAATGGTAAACAGATTGTGT+AGG 0.569087 5_3:+37008675 None:intergenic
ATCCTGGTGAAACTGGTGGA+AGG 0.570539 5_3:-37008061 Msa0809760:CDS
GCTCTTGAAGCTGCAAGAAG+TGG 0.571675 5_3:-37008557 Msa0809760:CDS
CATAAATCCCCTCACAGCAT+GGG 0.572541 5_3:-37012038 Msa0809760:exon
ACTTTGGTACCGAATCAGTA+AGG 0.574437 5_3:-37011628 Msa0809760:intron
GAGAGTGTGACGGTGGAAGG+AGG 0.575492 5_3:-37006727 Msa0809760:CDS
AGTGTGACGGTGGAAGGAGG+TGG 0.578214 5_3:-37006724 Msa0809760:CDS
AGCAAATGAGAGTGGTGTCA+AGG 0.581128 5_3:-37006653 Msa0809760:CDS
CATTGTGTCACGGCTCACAT+TGG 0.582035 5_3:-37011841 Msa0809760:CDS
GTATCGAATGAGTGGTTGAC+TGG 0.582453 5_3:+37006941 None:intergenic
GCAGCCGTAAGAATGATTTG+AGG 0.582798 5_3:+37011666 None:intergenic
GTAGCTGATGTACTTCGAGC+TGG 0.583158 5_3:-37009771 Msa0809760:intron
AAAATTGGCCCATGCTGTGA+GGG 0.583831 5_3:+37012030 None:intergenic
TCCTGGTGAAACTGGTGGAA+GGG 0.585464 5_3:-37008060 Msa0809760:CDS
GTAAGGTTGACATTGCAAAA+GGG 0.586771 5_3:+37011885 None:intergenic
TATGGTGTTTCTTATGTGAG+AGG 0.587329 5_3:-37010956 Msa0809760:CDS
CTTATGTGAGAGGACTTCAA+GGG 0.588473 5_3:-37010946 Msa0809760:CDS
ACTCTGAAACAAGTTTGTAA+CGG 0.590668 5_3:+37006899 None:intergenic
CAAATGCTGGAAGCATGGCT+GGG 0.593364 5_3:-37006825 Msa0809760:CDS
CATTAGGGCCTATAACTCCA+AGG 0.594911 5_3:+37008480 None:intergenic
TAAGGTTGACATTGCAAAAG+GGG 0.600776 5_3:+37011886 None:intergenic
AAAAGACACTTAATATGAGA+CGG 0.601763 5_3:+37006400 None:intergenic
GGGTATTTACTCTTGGAAGT+GGG 0.605290 5_3:+37008501 None:intergenic
CCGTTTCTACACAGGTCCAA+AGG 0.609130 5_3:-37007046 Msa0809760:CDS
AGAACCTACCGTTTCTACAC+AGG 0.612051 5_3:-37007054 Msa0809760:CDS
GGTTATCCTGGTGAAACTGG+TGG 0.612813 5_3:-37008065 Msa0809760:CDS
ACGTGGGTTGGAGATGTCAC+AGG 0.612949 5_3:+37011920 None:intergenic
GTCAAGGTGGTTGAAGAAGG+TGG 0.614362 5_3:-37006637 Msa0809760:CDS
AATTACAAATGCTGGAAGCA+TGG 0.618366 5_3:-37006830 Msa0809760:CDS
TGGAAATCCAGTGAAACAGT+TGG 0.620701 5_3:-37006758 Msa0809760:CDS
GTATACCGAGTTATCAATGG+TGG 0.620903 5_3:-37011767 Msa0809760:CDS
TTAAATCAGGTATATTGCGT+CGG 0.624270 5_3:-37009856 Msa0809760:intron
GCTCCTGCCATTCCTCGACT+CGG 0.625159 5_3:-37011789 Msa0809760:CDS
TGGACCTGTGTAGAAACGGT+AGG 0.625209 5_3:+37007050 None:intergenic
GGTAGGGTTTGAGAGTGTGA+CGG 0.635292 5_3:-37006737 Msa0809760:CDS
TTTACCATTAGAATAAGACT+AGG 0.636854 5_3:-37008662 Msa0809760:CDS
AGGGTTTGAGAGTGTGACGG+TGG 0.638866 5_3:-37006734 Msa0809760:CDS
ATTGGACCAAAGTCAAGAGA+CGG 0.639353 5_3:-37008255 Msa0809760:CDS
TAGAAACGGTAGGTTCTACC+GGG 0.648311 5_3:+37007060 None:intergenic
CTTAGTAGAGCAAATGAGAG+TGG 0.648348 5_3:-37006661 Msa0809760:CDS
GTGATTGGAACTGAGGCTAG+AGG 0.649624 5_3:-37011103 Msa0809760:CDS
TAAACAGATTGTGTAGGGCA+CGG 0.653543 5_3:+37008681 None:intergenic
ATACAACAAGGACGATCTAG+TGG 0.653851 5_3:-37010358 Msa0809760:CDS
TTATGTGAGAGGACTTCAAG+GGG 0.656152 5_3:-37010945 Msa0809760:CDS
AGTTTGGAACTCCATTGACA+CGG 0.658172 5_3:+37010317 None:intergenic
ATTAGGGCCTATAACTCCAA+GGG 0.662705 5_3:+37008481 None:intergenic
TTGTATGCAACTATGAAACG+AGG 0.664632 5_3:+37010375 None:intergenic
GAGCCAAAGACATTGTGTCA+CGG 0.665561 5_3:-37011851 Msa0809760:CDS
AATGAAGGTGATTGGAACTG+AGG 0.666042 5_3:-37011110 Msa0809760:intron
TATGATTTGGAAAATTGGAA+GGG 0.673969 5_3:-37010851 Msa0809760:CDS
ACAATGCTGGACAAGCTCAA+GGG 0.675868 5_3:-37011075 Msa0809760:CDS
ATATTTAGGGACCCAAGATG+GGG 0.678025 5_3:-37011025 Msa0809760:CDS
GAGGGAGACTACCAATGACA+TGG 0.689428 5_3:-37007152 Msa0809760:CDS
TGGTGGAATGAAGCTTTGCA+CGG 0.702092 5_3:-37011750 Msa0809760:CDS
ATGGATACTTGTTTACAAGG+AGG 0.708927 5_3:+37008416 None:intergenic
GAAAATTGGCCCATGCTGTG+AGG 0.711405 5_3:+37012029 None:intergenic
AAATTGGCCCATGCTGTGAG+GGG 0.711472 5_3:+37012031 None:intergenic
TAACTCGGTATACCGAGTCG+AGG 0.711678 5_3:+37011777 None:intergenic
TTTCATAGTTGCATACAACA+AGG 0.712280 5_3:-37010370 Msa0809760:CDS
GAGATGTCACAGGAGTAAGG+AGG 0.715685 5_3:+37011930 None:intergenic
AGACACTTAATATGAGACGG+AGG 0.717375 5_3:+37006403 None:intergenic
AAATGAGAGTGGTGTCAAGG+TGG 0.736902 5_3:-37006650 Msa0809760:CDS
TGTATGCAACTATGAAACGA+GGG 0.751077 5_3:+37010376 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTCATGATAATTTATTTT+CGG - chr5_3:37012011-37012030 Msa0809760:CDS 10.0%
!! ATATAACTATTATGTGTTTA+CGG - chr5_3:37008746-37008765 Msa0809760:CDS 15.0%
!!! AATAAGTGATTATGTTATTT+TGG - chr5_3:37010162-37010181 Msa0809760:intron 15.0%
!! TATACTAGAAAAAGTTATTT+GGG + chr5_3:37011212-37011231 None:intergenic 15.0%
!! ATATACTAGAAAAAGTTATT+TGG + chr5_3:37011213-37011232 None:intergenic 15.0%
!! ACATAATTCAGTGTAATTAT+AGG + chr5_3:37006937-37006956 None:intergenic 20.0%
!! CTTCAAAAAAATCCAAATAT+GGG + chr5_3:37007055-37007074 None:intergenic 20.0%
!! TCTTCAAAAAAATCCAAATA+TGG + chr5_3:37007056-37007075 None:intergenic 20.0%
!! ATTACAATACAAACAAAACT+CGG + chr5_3:37007298-37007317 None:intergenic 20.0%
!! ACCAAACATAAACATATTTA+GGG - chr5_3:37007409-37007428 Msa0809760:intron 20.0%
!! ATGGATTTGGATTATTAAAA+TGG + chr5_3:37008005-37008024 None:intergenic 20.0%
!!! TTACAATCTTTTAACCAATA+CGG - chr5_3:37008160-37008179 Msa0809760:CDS 20.0%
!! GTTCTTATAAATTACAAAAG+TGG - chr5_3:37008260-37008279 Msa0809760:CDS 20.0%
!!! TTGATTAGTATGAATGATTT+TGG - chr5_3:37008565-37008584 Msa0809760:CDS 20.0%
!! TCTGATTATGAAATAAACAA+AGG + chr5_3:37008717-37008736 None:intergenic 20.0%
!! TAAGATAACATGATAGTTTA+AGG + chr5_3:37008853-37008872 None:intergenic 20.0%
!! ATGTTATCTTACTTTATCAA+TGG - chr5_3:37008862-37008881 Msa0809760:intron 20.0%
!!! TTTCTCATTAGTATTTTTGT+CGG - chr5_3:37008902-37008921 Msa0809760:intron 20.0%
!!! ATTTATGTGTATTTTCATCA+TGG - chr5_3:37009097-37009116 Msa0809760:intron 20.0%
!! AAACAAAATACAAAAGAAGA+AGG + chr5_3:37009263-37009282 None:intergenic 20.0%
!!! TGTCTTAATTTTACTCAATT+TGG - chr5_3:37009344-37009363 Msa0809760:intron 20.0%
!! TTTGACATAAACTAAAACTA+AGG + chr5_3:37009407-37009426 None:intergenic 20.0%
!!! AAGAACTATTGATGATTTAT+TGG + chr5_3:37009993-37010012 None:intergenic 20.0%
!! AAACAAGTATCCATATTAAA+AGG - chr5_3:37010040-37010059 Msa0809760:intron 20.0%
!!! TGATTATGTTATTTTGGTTA+TGG - chr5_3:37010168-37010187 Msa0809760:intron 20.0%
!!! GATTATGTTATTTTGGTTAT+GGG - chr5_3:37010169-37010188 Msa0809760:intron 20.0%
!! TATGTATGTTTATTTGTTCA+TGG + chr5_3:37010470-37010489 None:intergenic 20.0%
!! ACAAATAAACATACATAATG+TGG - chr5_3:37010473-37010492 Msa0809760:intron 20.0%
!! TACATAATGTGGTAAAAAAA+TGG - chr5_3:37010484-37010503 Msa0809760:intron 20.0%
!! TGAAGTTTATACATGTTTAA+AGG + chr5_3:37010709-37010728 None:intergenic 20.0%
!! AAATGAGAGAATATTTAGTT+AGG - chr5_3:37010754-37010773 Msa0809760:intron 20.0%
!!! TTATTTTATATTGGGAAACA+AGG - chr5_3:37010798-37010817 Msa0809760:intron 20.0%
!!! TATTTTATATTGGGAAACAA+GGG - chr5_3:37010799-37010818 Msa0809760:intron 20.0%
!!! ATAATCAATGTTTTCAATTG+TGG + chr5_3:37011142-37011161 None:intergenic 20.0%
!! ATACTAGAAAAAGTTATTTG+GGG + chr5_3:37011211-37011230 None:intergenic 20.0%
!!! GTATTTTGATGAAATCTTTT+GGG + chr5_3:37011323-37011342 None:intergenic 20.0%
!! ATCAAGTAAAGAATAACTAA+TGG - chr5_3:37011919-37011938 Msa0809760:CDS 20.0%
!! ATGCATATTAATTTACTCAT+TGG + chr5_3:37012098-37012117 None:intergenic 20.0%
! AAAAATGAAAGTAATGGTGA+TGG + chr5_3:37006443-37006462 None:intergenic 25.0%
! GAAGAGAAAAATGAAAGTAA+TGG + chr5_3:37006449-37006468 None:intergenic 25.0%
!! AACAACATTTTGTCAAACAT+GGG + chr5_3:37006861-37006880 None:intergenic 25.0%
! CAAATCATTTAACCCATATT+TGG - chr5_3:37007040-37007059 Msa0809760:CDS 25.0%
! TTTCAAATGAATTCTACTAC+TGG - chr5_3:37007218-37007237 Msa0809760:intron 25.0%
! TTCAAATGAATTCTACTACT+GGG - chr5_3:37007219-37007238 Msa0809760:intron 25.0%
! TTACAATACAAACAAAACTC+GGG + chr5_3:37007297-37007316 None:intergenic 25.0%
! ATTATGTGTTGTATGAATGA+AGG - chr5_3:37007322-37007341 Msa0809760:intron 25.0%
! CACCAAACATAAACATATTT+AGG - chr5_3:37007408-37007427 Msa0809760:intron 25.0%
! TCCCTAAATATGTTTATGTT+TGG + chr5_3:37007413-37007432 None:intergenic 25.0%
!! TATGATTTGGAAAATTGGAA+GGG - chr5_3:37007596-37007615 Msa0809760:intron 25.0%
! AGAGAAAAGAAAACTTACTT+TGG + chr5_3:37007645-37007664 None:intergenic 25.0%
!! AGTAAGTTTTCTTTTCTCTA+TGG - chr5_3:37007646-37007665 Msa0809760:intron 25.0%
! TACTTGGATGATTAATTCTA+TGG - chr5_3:37007674-37007693 Msa0809760:intron 25.0%
! ATAAGAATCATTAGCATAAC+AGG + chr5_3:37007953-37007972 None:intergenic 25.0%
!! CTGAATTATTAGAATGGATT+TGG + chr5_3:37008018-37008037 None:intergenic 25.0%
! CAAATCCATTCTAATAATTC+AGG - chr5_3:37008016-37008035 Msa0809760:intron 25.0%
! AGTAACCTGAATTATTAGAA+TGG + chr5_3:37008024-37008043 None:intergenic 25.0%
! TGGAAAACATTGTTTCATAA+AGG + chr5_3:37008402-37008421 None:intergenic 25.0%
!! AATGTTTTCCACTCTATTAA+AGG - chr5_3:37008411-37008430 Msa0809760:CDS 25.0%
! CGATTCATATATGAAAAACA+AGG - chr5_3:37008628-37008647 Msa0809760:CDS 25.0%
! TTTGCTTATATTAAGTCACA+TGG - chr5_3:37008934-37008953 Msa0809760:intron 25.0%
! TTATATTAAGTCACATGGTT+TGG - chr5_3:37008939-37008958 Msa0809760:intron 25.0%
!!! TATCACCAAATTTTTTCCAA+TGG + chr5_3:37009060-37009079 None:intergenic 25.0%
!!! TTCATCATGGTTTTTAGTAT+AGG - chr5_3:37009110-37009129 Msa0809760:intron 25.0%
! CAAAGATGTAACATAATTAG+AGG - chr5_3:37009140-37009159 Msa0809760:intron 25.0%
! CTAAACATAGACTAATTCTA+AGG + chr5_3:37009484-37009503 None:intergenic 25.0%
!! CTTAGAATTAGTCTATGTTT+AGG - chr5_3:37009482-37009501 Msa0809760:intron 25.0%
! TTGTGTGATCAAAAAATTTC+AGG - chr5_3:37009659-37009678 Msa0809760:intron 25.0%
! TGTGTGATCAAAAAATTTCA+GGG - chr5_3:37009660-37009679 Msa0809760:intron 25.0%
! TTTACCATTAGAATAAGACT+AGG - chr5_3:37009785-37009804 Msa0809760:CDS 25.0%
!! TTGATGATTTATTGGCATTA+GGG + chr5_3:37009985-37010004 None:intergenic 25.0%
!! ATTGATGATTTATTGGCATT+AGG + chr5_3:37009986-37010005 None:intergenic 25.0%
!! GTTCTTTTAGCAAACTATTT+TGG - chr5_3:37010007-37010026 Msa0809760:intron 25.0%
! AATATGGATACTTGTTTACA+AGG + chr5_3:37010037-37010056 None:intergenic 25.0%
!! ACTGTAAAAGCCTTTTAATA+TGG + chr5_3:37010053-37010072 None:intergenic 25.0%
! CACAATATTACCAAAATAAC+AGG + chr5_3:37010298-37010317 None:intergenic 25.0%
!!! GTTATTTTGGTAATATTGTG+TGG - chr5_3:37010298-37010317 Msa0809760:CDS 25.0%
! TTAGCAAAAGTAATATCAAC+AGG + chr5_3:37010328-37010347 None:intergenic 25.0%
! GCTAAGAATAATGACAAAAT+TGG - chr5_3:37010343-37010362 Msa0809760:CDS 25.0%
! AAGAATAATGACAAAATTGG+AGG - chr5_3:37010346-37010365 Msa0809760:CDS 25.0%
!! ATGTGGTAAAAAAATGGATT+TGG - chr5_3:37010490-37010509 Msa0809760:intron 25.0%
! TATACATGTTTAAAGGATCT+TGG + chr5_3:37010702-37010721 None:intergenic 25.0%
! TTTAGTTGTGCTTACTAAAT+GGG + chr5_3:37010859-37010878 None:intergenic 25.0%
! ATTTAGTTGTGCTTACTAAA+TGG + chr5_3:37010860-37010879 None:intergenic 25.0%
!! TTAACTATTTTCTTGGAATC+TGG + chr5_3:37010960-37010979 None:intergenic 25.0%
! AGATTCCAAGAAAATAGTTA+AGG - chr5_3:37010959-37010978 Msa0809760:CDS 25.0%
! TAGAAAATAGTGTTTGTTTG+CGG + chr5_3:37011057-37011076 None:intergenic 25.0%
! ATATCAAATTGCTACATACA+TGG + chr5_3:37011082-37011101 None:intergenic 25.0%
! GGGATATATACAATGTATTT+CGG + chr5_3:37011190-37011209 None:intergenic 25.0%
! TACTAGAAAAAGTTATTTGG+GGG + chr5_3:37011210-37011229 None:intergenic 25.0%
!! AGTTGAGAAATAGTAGTTTT+AGG + chr5_3:37011239-37011258 None:intergenic 25.0%
!! ATATTTTATCATTGCAATGC+AGG - chr5_3:37011273-37011292 Msa0809760:intron 25.0%
!!! GGTATTTTGATGAAATCTTT+TGG + chr5_3:37011324-37011343 None:intergenic 25.0%
! ATATGACTCTACTTATGTAA+TGG - chr5_3:37011964-37011983 Msa0809760:CDS 25.0%
! AAAAGACACTTAATATGAGA+CGG + chr5_3:37012050-37012069 None:intergenic 25.0%
!! CTCATATTAAGTGTCTTTTA+AGG - chr5_3:37012051-37012070 Msa0809760:five_prime_UTR 25.0%
!! AAGTAATGGTGATGGAAAAT+TGG + chr5_3:37006435-37006454 None:intergenic 30.0%
TTTCCCTCAAATCATTCTTA+CGG - chr5_3:37006777-37006796 Msa0809760:CDS 30.0%
! CAACAACATTTTGTCAAACA+TGG + chr5_3:37006862-37006881 None:intergenic 30.0%
CATGTTTGACAAAATGTTGT+TGG - chr5_3:37006860-37006879 Msa0809760:CDS 30.0%
GTTGAAACACTTCTTGAATT+AGG - chr5_3:37006882-37006901 Msa0809760:CDS 30.0%
TTCTCAAATTATTAGCGTGT+CGG - chr5_3:37006961-37006980 Msa0809760:CDS 30.0%
GATTTGAATGAAATGAAGCA+CGG + chr5_3:37007026-37007045 None:intergenic 30.0%
! CTACAATTCTAGTATTGAGT+GGG - chr5_3:37007178-37007197 Msa0809760:intron 30.0%
CCATACTTTGAATTTACCAA+AGG + chr5_3:37007476-37007495 None:intergenic 30.0%
CCTTTGGTAAATTCAAAGTA+TGG - chr5_3:37007473-37007492 Msa0809760:intron 30.0%
!!! AATTAGTTTTCCACCTTCAA+AGG + chr5_3:37007531-37007550 None:intergenic 30.0%
TTTGAAGGTGGAAAACTAAT+TGG - chr5_3:37007530-37007549 Msa0809760:intron 30.0%
! CTTCCAATTTTCCAAATCAT+AGG + chr5_3:37007597-37007616 None:intergenic 30.0%
! CTATGATTTGGAAAATTGGA+AGG - chr5_3:37007595-37007614 Msa0809760:intron 30.0%
TTTCTCTATGGTATAGTACT+TGG - chr5_3:37007658-37007677 Msa0809760:intron 30.0%
GTTTAGCATTCTTAAAATCG+TGG - chr5_3:37007713-37007732 Msa0809760:intron 30.0%
AAAACTCAAAGACAAATTCG+AGG + chr5_3:37007793-37007812 None:intergenic 30.0%
! TCAGGTTACTTTACAAGATT+TGG - chr5_3:37008034-37008053 Msa0809760:CDS 30.0%
TTTCATAGTTGCATACAACA+AGG - chr5_3:37008077-37008096 Msa0809760:CDS 30.0%
AGGAAAAAATGGAAGTTCAA+TGG - chr5_3:37008185-37008204 Msa0809760:CDS 30.0%
GGAAAAAATGGAAGTTCAAT+GGG - chr5_3:37008186-37008205 Msa0809760:CDS 30.0%
ACGCAATATACCTGATTTAA+CGG + chr5_3:37008591-37008610 None:intergenic 30.0%
TTAAATCAGGTATATTGCGT+CGG - chr5_3:37008591-37008610 Msa0809760:CDS 30.0%
TACTTTATCAATGGTCTCAA+TGG - chr5_3:37008871-37008890 Msa0809760:intron 30.0%
AGTCTCCATTGGAAAAAATT+TGG - chr5_3:37009052-37009071 Msa0809760:intron 30.0%
!!! TCACTTAGTTGTTTTAGTTC+TGG - chr5_3:37009217-37009236 Msa0809760:intron 30.0%
TTATAGAACTAGAGACAAAG+AGG + chr5_3:37009430-37009449 None:intergenic 30.0%
ATGTTGTACTACCGTTATTT+CGG - chr5_3:37009511-37009530 Msa0809760:intron 30.0%
! TATAACTTGTGCCGAAATAA+CGG + chr5_3:37009525-37009544 None:intergenic 30.0%
CTTGTGTATGTCAGAAATTA+TGG + chr5_3:37009600-37009619 None:intergenic 30.0%
!! CTATTACAGTTTTGATGAAC+CGG - chr5_3:37009622-37009641 Msa0809760:intron 30.0%
TGATCAAAAAATTTCAGGGA+TGG - chr5_3:37009664-37009683 Msa0809760:intron 30.0%
AATGGTAAACAGATTGTGTA+GGG + chr5_3:37009774-37009793 None:intergenic 30.0%
TAATGGTAAACAGATTGTGT+AGG + chr5_3:37009775-37009794 None:intergenic 30.0%
!!! TGTTATTTTGGTTATGGGAT+TGG - chr5_3:37010174-37010193 Msa0809760:intron 30.0%
!! TTCTAAGAAGCCTGTTATTT+TGG - chr5_3:37010285-37010304 Msa0809760:CDS 30.0%
!! ATTTTGGTAATATTGTGTGG+TGG - chr5_3:37010301-37010320 Msa0809760:CDS 30.0%
AGACATAAGAAAACTAACCA+GGG + chr5_3:37010444-37010463 None:intergenic 30.0%
AAGACATAAGAAAACTAACC+AGG + chr5_3:37010445-37010464 None:intergenic 30.0%
CACAACTAAATCTCAATTAC+TGG - chr5_3:37010869-37010888 Msa0809760:CDS 30.0%
TAAATCTCAATTACTGGATG+CGG - chr5_3:37010875-37010894 Msa0809760:CDS 30.0%
ATTTGGTTGAATTGACTAGA+TGG - chr5_3:37010923-37010942 Msa0809760:CDS 30.0%
AGGAATAATTTGAGTAGCTT+AGG + chr5_3:37011446-37011465 None:intergenic 30.0%
!! ACTCTGAAACAAGTTTGTAA+CGG + chr5_3:37011551-37011570 None:intergenic 30.0%
! TACAAACTTGTTTCAGAGTT+AGG - chr5_3:37011552-37011571 Msa0809760:intron 30.0%
ATGTCCATTTCTGTAACATT+GGG - chr5_3:37011594-37011613 Msa0809760:intron 30.0%
AATTCCCAATGTTACAGAAA+TGG + chr5_3:37011601-37011620 None:intergenic 30.0%
TTTCCATTTCTACCTTTCTT+TGG + chr5_3:37011675-37011694 None:intergenic 30.0%
! TATGTAATGGAAAGCTTGAT+TGG - chr5_3:37011977-37011996 Msa0809760:CDS 30.0%
AGGTACATTAATCGGTGAAT+CGG + chr5_3:37006500-37006519 None:intergenic 35.0%
! GAGTAAGGAGGTACATTAAT+CGG + chr5_3:37006508-37006527 None:intergenic 35.0%
TAAGGTTGACATTGCAAAAG+GGG + chr5_3:37006564-37006583 None:intergenic 35.0%
GTAAGGTTGACATTGCAAAA+GGG + chr5_3:37006565-37006584 None:intergenic 35.0%
! TCATTCCACCATTGATAACT+CGG + chr5_3:37006688-37006707 None:intergenic 35.0%
! GGTGTTTCTTATGTTGGTAA+GGG - chr5_3:37006718-37006737 Msa0809760:CDS 35.0%
! GTGTTTCTTATGTTGGTAAG+GGG - chr5_3:37006719-37006738 Msa0809760:CDS 35.0%
! CTTCTTTTGATCCCAAACTT+TGG - chr5_3:37006803-37006822 Msa0809760:CDS 35.0%
! AGTTACTGACCTTACTGATT+CGG + chr5_3:37006831-37006850 None:intergenic 35.0%
TTCAGTGTAATTATAGGCGT+CGG + chr5_3:37006931-37006950 None:intergenic 35.0%
TCTCAAATTATTAGCGTGTC+GGG - chr5_3:37006962-37006981 Msa0809760:CDS 35.0%
AATGAAATGAAGCACGGATA+CGG + chr5_3:37007020-37007039 None:intergenic 35.0%
! TTTTAGTACTTGCCCAATCT+CGG - chr5_3:37007114-37007133 Msa0809760:CDS 35.0%
CCACTCAATACTAGAATTGT+AGG + chr5_3:37007180-37007199 None:intergenic 35.0%
! CCTACAATTCTAGTATTGAG+TGG - chr5_3:37007177-37007196 Msa0809760:intron 35.0%
AAATGAATTCTACTACTGGG+CGG - chr5_3:37007222-37007241 Msa0809760:intron 35.0%
!! GATTAGTCTCCTGAAGTATT+CGG - chr5_3:37007248-37007267 Msa0809760:intron 35.0%
GTTGTATGAATGAAGGTGAT+TGG - chr5_3:37007329-37007348 Msa0809760:intron 35.0%
TATGGTGTTTCTTATGTGAG+AGG - chr5_3:37007491-37007510 Msa0809760:intron 35.0%
ACACTTTACTGCCTATGATT+TGG - chr5_3:37007583-37007602 Msa0809760:intron 35.0%
! CTGCCTATGATTTGGAAAAT+TGG - chr5_3:37007591-37007610 Msa0809760:intron 35.0%
CATTCTTAAAATCGTGGTTG+AGG - chr5_3:37007719-37007738 Msa0809760:intron 35.0%
ATTGTCTAATATGCACAAGC+CGG + chr5_3:37007765-37007784 None:intergenic 35.0%
! TTATGTCGTTGATGAATCCT+TGG - chr5_3:37007851-37007870 Msa0809760:intron 35.0%
AAGTCATGATTCGATTTCCA+AGG + chr5_3:37007871-37007890 None:intergenic 35.0%
! GGTTACTTTACAAGATTTGG+CGG - chr5_3:37008037-37008056 Msa0809760:CDS 35.0%
TGTATGCAACTATGAAACGA+GGG + chr5_3:37008074-37008093 None:intergenic 35.0%
TTGTATGCAACTATGAAACG+AGG + chr5_3:37008075-37008094 None:intergenic 35.0%
AGATTGTAATCTGCACAGTT+TGG + chr5_3:37008149-37008168 None:intergenic 35.0%
! ATCTTTTAACCAATACGGCA+AGG - chr5_3:37008165-37008184 Msa0809760:CDS 35.0%
AACTGTTTCACCAACTAAGT+AGG + chr5_3:37008448-37008467 None:intergenic 35.0%
!! ATGATTTTGGCCGTTAAATC+AGG - chr5_3:37008578-37008597 Msa0809760:CDS 35.0%
TTATCAATGGTCTCAATGGA+AGG - chr5_3:37008875-37008894 Msa0809760:intron 35.0%
TTTCCAATGGAGACTATGAT+GGG + chr5_3:37009047-37009066 None:intergenic 35.0%
! TTTTCCAATGGAGACTATGA+TGG + chr5_3:37009048-37009067 None:intergenic 35.0%
!! CAAGCCTAGTCTTATTCTAA+TGG + chr5_3:37009792-37009811 None:intergenic 35.0%
! ATAAGACTAGGCTTGTTTGA+TGG - chr5_3:37009797-37009816 Msa0809760:CDS 35.0%
! TAAGACTAGGCTTGTTTGAT+GGG - chr5_3:37009798-37009817 Msa0809760:CDS 35.0%
AATCCAACCAAACTCCAATA+TGG - chr5_3:37009821-37009840 Msa0809760:CDS 35.0%
AATTCTGCCATATTGGAGTT+TGG + chr5_3:37009831-37009850 None:intergenic 35.0%
AAACTCCAATATGGCAGAAT+TGG - chr5_3:37009830-37009849 Msa0809760:CDS 35.0%
GTAAATACCCTTGGAGTTAT+AGG - chr5_3:37009959-37009978 Msa0809760:intron 35.0%
ATGGATACTTGTTTACAAGG+AGG + chr5_3:37010034-37010053 None:intergenic 35.0%
! TTTTAGCAACTTCAACTGCT+CGG + chr5_3:37010144-37010163 None:intergenic 35.0%
! AGAGTTCATTTAGAGTTACC+TGG - chr5_3:37010226-37010245 Msa0809760:intron 35.0%
! ATAAGTTTCTGTTGCTTACC+AGG + chr5_3:37010247-37010266 None:intergenic 35.0%
!! ACAAAATTGGAGGCATCATT+TGG - chr5_3:37010356-37010375 Msa0809760:CDS 35.0%
!! CAAAATTGGAGGCATCATTT+GGG - chr5_3:37010357-37010376 Msa0809760:CDS 35.0%
ACCATTCAATCAAGATTGAG+CGG + chr5_3:37010631-37010650 None:intergenic 35.0%
!! AAATCTCTATCGTTGGTTCA+AGG + chr5_3:37010907-37010926 None:intergenic 35.0%
TTGAACCAACGATAGAGATT+TGG - chr5_3:37010906-37010925 Msa0809760:CDS 35.0%
TTCAACCAAATCTCTATCGT+TGG + chr5_3:37010914-37010933 None:intergenic 35.0%
! TGCGACCTTAACTATTTTCT+TGG + chr5_3:37010967-37010986 None:intergenic 35.0%
! TTTTATCATTGCAATGCAGG+AGG - chr5_3:37011276-37011295 Msa0809760:intron 35.0%
TTTATCATTGCAATGCAGGA+GGG - chr5_3:37011277-37011296 Msa0809760:intron 35.0%
TTTGACGGAAATGAAGTTGT+AGG + chr5_3:37011466-37011485 None:intergenic 35.0%
!!! GTGAAGGTTGTTGTTTTTGA+CGG + chr5_3:37011481-37011500 None:intergenic 35.0%
CAATGTTACAGAAATGGACA+TGG + chr5_3:37011595-37011614 None:intergenic 35.0%
CATGTCCATTTCTGTAACAT+TGG - chr5_3:37011593-37011612 Msa0809760:intron 35.0%
ACATTGGGAATTACAAATGC+TGG - chr5_3:37011609-37011628 Msa0809760:intron 35.0%
AATTACAAATGCTGGAAGCA+TGG - chr5_3:37011617-37011636 Msa0809760:intron 35.0%
AAGCCAAAGAAAGGTAGAAA+TGG - chr5_3:37011669-37011688 Msa0809760:CDS 35.0%
TGAAGAAGGTGGTTATTTGT+TGG - chr5_3:37011821-37011840 Msa0809760:CDS 35.0%
TTAATATGAGACGGAGGATA+GGG + chr5_3:37012041-37012060 None:intergenic 35.0%
! GAAGAATTTTGTACGTGGGT+TGG + chr5_3:37006542-37006561 None:intergenic 40.0%
! AGGGGAAGAATTTTGTACGT+GGG + chr5_3:37006546-37006565 None:intergenic 40.0%
! AAGGGGAAGAATTTTGTACG+TGG + chr5_3:37006547-37006566 None:intergenic 40.0%
GGTAAGGTTGACATTGCAAA+AGG + chr5_3:37006566-37006585 None:intergenic 40.0%
TCGGTATACCGAGTTATCAA+TGG - chr5_3:37006677-37006696 Msa0809760:CDS 40.0%
GTATACCGAGTTATCAATGG+TGG - chr5_3:37006680-37006699 Msa0809760:CDS 40.0%
TTGCACGGTGTTTCTTATGT+TGG - chr5_3:37006712-37006731 Msa0809760:CDS 40.0%
CGGTGTTTCTTATGTTGGTA+AGG - chr5_3:37006717-37006736 Msa0809760:CDS 40.0%
GGTAAGGGGATAAGATTGAA+TGG - chr5_3:37006733-37006752 Msa0809760:CDS 40.0%
CAGCCGTAAGAATGATTTGA+GGG + chr5_3:37006783-37006802 None:intergenic 40.0%
!! CTGATTCGGTACCAAAGTTT+GGG + chr5_3:37006817-37006836 None:intergenic 40.0%
!! ACTGATTCGGTACCAAAGTT+TGG + chr5_3:37006818-37006837 None:intergenic 40.0%
! ACTTTGGTACCGAATCAGTA+AGG - chr5_3:37006819-37006838 Msa0809760:CDS 40.0%
CTCAAATTATTAGCGTGTCG+GGG - chr5_3:37006963-37006982 Msa0809760:CDS 40.0%
TTTAGTACTTGCCCAATCTC+GGG - chr5_3:37007115-37007134 Msa0809760:CDS 40.0%
GGTCTCAAACCATATACCAT+CGG + chr5_3:37007146-37007165 None:intergenic 40.0%
! TGGTATATGGTTTGAGACCT+AGG - chr5_3:37007147-37007166 Msa0809760:CDS 40.0%
! GTATTGAGTGGGTTCATACA+TGG - chr5_3:37007189-37007208 Msa0809760:intron 40.0%
AATGAAGGTGATTGGAACTG+AGG - chr5_3:37007337-37007356 Msa0809760:intron 40.0%
! AAGCTCAAGGGATGACTTTT+TGG - chr5_3:37007384-37007403 Msa0809760:intron 40.0%
! AGCTCAAGGGATGACTTTTT+GGG - chr5_3:37007385-37007404 Msa0809760:intron 40.0%
ACATATTTAGGGACCCAAGA+TGG - chr5_3:37007420-37007439 Msa0809760:intron 40.0%
CATATTTAGGGACCCAAGAT+GGG - chr5_3:37007421-37007440 Msa0809760:intron 40.0%
ATATTTAGGGACCCAAGATG+GGG - chr5_3:37007422-37007441 Msa0809760:intron 40.0%
TCTTATGTGAGAGGACTTCA+AGG - chr5_3:37007500-37007519 Msa0809760:intron 40.0%
CTTATGTGAGAGGACTTCAA+GGG - chr5_3:37007501-37007520 Msa0809760:intron 40.0%
TTATGTGAGAGGACTTCAAG+GGG - chr5_3:37007502-37007521 Msa0809760:intron 40.0%
GAAGGTGGAAAACTAATTGG+AGG - chr5_3:37007533-37007552 Msa0809760:intron 40.0%
ATACAACAAGGACGATCTAG+TGG - chr5_3:37008089-37008108 Msa0809760:CDS 40.0%
! AGTTTGGAACTCCATTGACA+CGG + chr5_3:37008133-37008152 None:intergenic 40.0%
!!! CCATTTTTTCCTTGCCGTAT+TGG + chr5_3:37008177-37008196 None:intergenic 40.0%
CCAATACGGCAAGGAAAAAA+TGG - chr5_3:37008174-37008193 Msa0809760:CDS 40.0%
TGCTCACACCTTTAATAGAG+TGG + chr5_3:37008422-37008441 None:intergenic 40.0%
! CTCTATTAAAGGTGTGAGCA+TGG - chr5_3:37008422-37008441 Msa0809760:CDS 40.0%
AGGTTATGCAAAAACACCAG+AGG - chr5_3:37008648-37008667 Msa0809760:CDS 40.0%
GTGGGGTCTAATGAAAATGT+AGG + chr5_3:37008965-37008984 None:intergenic 40.0%
TCATATATATGTGGGGAGTG+GGG + chr5_3:37008982-37009001 None:intergenic 40.0%
CTCATATATATGTGGGGAGT+GGG + chr5_3:37008983-37009002 None:intergenic 40.0%
GCTTGCCTCATATATATGTG+GGG + chr5_3:37008989-37009008 None:intergenic 40.0%
GGCTTGCCTCATATATATGT+GGG + chr5_3:37008990-37009009 None:intergenic 40.0%
! TGGCTTGCCTCATATATATG+TGG + chr5_3:37008991-37009010 None:intergenic 40.0%
! CCATCATTGATGGCTTAGAA+TGG + chr5_3:37009011-37009030 None:intergenic 40.0%
CCATTCTAAGCCATCAATGA+TGG - chr5_3:37009008-37009027 Msa0809760:intron 40.0%
TAAGCCATCAATGATGGTCA+TGG - chr5_3:37009014-37009033 Msa0809760:intron 40.0%
!! TTACAGTTTTGATGAACCGG+TGG - chr5_3:37009625-37009644 Msa0809760:intron 40.0%
TAAACAGATTGTGTAGGGCA+CGG + chr5_3:37009769-37009788 None:intergenic 40.0%
TTCGACCAATTCTGCCATAT+TGG + chr5_3:37009838-37009857 None:intergenic 40.0%
GGGTATTTACTCTTGGAAGT+GGG + chr5_3:37009949-37009968 None:intergenic 40.0%
! AGGGTATTTACTCTTGGAAG+TGG + chr5_3:37009950-37009969 None:intergenic 40.0%
CTTCCAAGAGTAAATACCCT+TGG - chr5_3:37009950-37009969 Msa0809760:intron 40.0%
!! ACTCCAAGGGTATTTACTCT+TGG + chr5_3:37009956-37009975 None:intergenic 40.0%
ATTAGGGCCTATAACTCCAA+GGG + chr5_3:37009969-37009988 None:intergenic 40.0%
ATCCAGAACGATAATGTGTC+TGG + chr5_3:37010084-37010103 None:intergenic 40.0%
! TATCGTTCTGGATGTACTGA+TGG - chr5_3:37010091-37010110 Msa0809760:intron 40.0%
ATTGGACCAAAGTCAAGAGA+CGG - chr5_3:37010192-37010211 Msa0809760:intron 40.0%
TCAGGTTACATCTGGAGATT+GGG - chr5_3:37010539-37010558 Msa0809760:intron 40.0%
ACCGCTCAATCTTGATTGAA+TGG - chr5_3:37010627-37010646 Msa0809760:intron 40.0%
AGACTTTGTAGCTGCAATTG+TGG + chr5_3:37010991-37011010 None:intergenic 40.0%
!! TCTTTTGGGTACCATGTCAT+TGG + chr5_3:37011309-37011328 None:intergenic 40.0%
!!! GTTTTCGAGTATCGAATGAG+TGG + chr5_3:37011517-37011536 None:intergenic 40.0%
CTGTTTGTGAAGCCAAAGAA+AGG - chr5_3:37011660-37011679 Msa0809760:CDS 40.0%
TGGAAATCCAGTGAAACAGT+TGG - chr5_3:37011689-37011708 Msa0809760:CDS 40.0%
AATCCAGTGAAACAGTTGGT+AGG - chr5_3:37011693-37011712 Msa0809760:CDS 40.0%
! ATCCAGTGAAACAGTTGGTA+GGG - chr5_3:37011694-37011713 Msa0809760:CDS 40.0%
CTTAGTAGAGCAAATGAGAG+TGG - chr5_3:37011786-37011805 Msa0809760:CDS 40.0%
! AGGTGGTTATTTGTTGGTTG+TGG - chr5_3:37011827-37011846 Msa0809760:CDS 40.0%
! GGTGGTTATTTGTTGGTTGT+GGG - chr5_3:37011828-37011847 Msa0809760:CDS 40.0%
! TTATTTGTTGGTTGTGGGAG+AGG - chr5_3:37011833-37011852 Msa0809760:CDS 40.0%
CTTAATATGAGACGGAGGAT+AGG + chr5_3:37012042-37012061 None:intergenic 40.0%
AGACACTTAATATGAGACGG+AGG + chr5_3:37012047-37012066 None:intergenic 40.0%
CATAAATCCCCTCACAGCAT+GGG - chr5_3:37006409-37006428 Msa0809760:three_prime_UTR 45.0%
AAAATTGGCCCATGCTGTGA+GGG + chr5_3:37006420-37006439 None:intergenic 45.0%
TTGGAGATGTCACAGGAGTA+AGG + chr5_3:37006523-37006542 None:intergenic 45.0%
TGGCTCTTTGAGTGATGGTA+AGG + chr5_3:37006582-37006601 None:intergenic 45.0%
!! GTCTTTGGCTCTTTGAGTGA+TGG + chr5_3:37006587-37006606 None:intergenic 45.0%
GAGCCAAAGACATTGTGTCA+CGG - chr5_3:37006596-37006615 Msa0809760:CDS 45.0%
TGGTGGAATGAAGCTTTGCA+CGG - chr5_3:37006697-37006716 Msa0809760:CDS 45.0%
GCAGCCGTAAGAATGATTTG+AGG + chr5_3:37006784-37006803 None:intergenic 45.0%
!! GTAATTATAGGCGTCGGTGT+CGG + chr5_3:37006925-37006944 None:intergenic 45.0%
TTAGTACTTGCCCAATCTCG+GGG - chr5_3:37007116-37007135 Msa0809760:CDS 45.0%
ACAAAACTCGGGTATCTGCT+TGG + chr5_3:37007286-37007305 None:intergenic 45.0%
TACAATGCTGGACAAGCTCA+AGG - chr5_3:37007371-37007390 Msa0809760:intron 45.0%
ACAATGCTGGACAAGCTCAA+GGG - chr5_3:37007372-37007391 Msa0809760:intron 45.0%
AACAGCTGGAGAAGATCCTT+TGG - chr5_3:37007457-37007476 Msa0809760:intron 45.0%
CTTCAAGGGGATTCCTTTGA+AGG - chr5_3:37007515-37007534 Msa0809760:intron 45.0%
CTAACACAACCCCACAAAAC+CGG - chr5_3:37007743-37007762 Msa0809760:intron 45.0%
!! TATGCACAAGCCGGTTTTGT+GGG + chr5_3:37007756-37007775 None:intergenic 45.0%
!! ATATGCACAAGCCGGTTTTG+TGG + chr5_3:37007757-37007776 None:intergenic 45.0%
TGTGCTTACAACCGTGTCAA+TGG - chr5_3:37008119-37008138 Msa0809760:CDS 45.0%
ACATCAGCTACAACATCCTC+TGG + chr5_3:37008667-37008686 None:intergenic 45.0%
CCTCATATATATGTGGGGAG+TGG + chr5_3:37008984-37009003 None:intergenic 45.0%
CCACTCCCCACATATATATG+AGG - chr5_3:37008981-37009000 Msa0809760:intron 45.0%
!! TGGAGACTATGATGGGCATT+GGG + chr5_3:37009040-37009059 None:intergenic 45.0%
!! ATGGAGACTATGATGGGCAT+TGG + chr5_3:37009041-37009060 None:intergenic 45.0%
ATGCCCATCATAGTCTCCAT+TGG - chr5_3:37009041-37009060 Msa0809760:intron 45.0%
CACAACATGTAAATCGCCAC+CGG + chr5_3:37009644-37009663 None:intergenic 45.0%
! TCAGGGATGGATTTAGAGTG+TGG - chr5_3:37009677-37009696 Msa0809760:intron 45.0%
!! GCACGGTCGATTTGAGATAT+AGG + chr5_3:37009752-37009771 None:intergenic 45.0%
CTGCCATATTGGAGTTTGGT+TGG + chr5_3:37009827-37009846 None:intergenic 45.0%
TTCTTGCAGCTTCAAGAGCA+AGG + chr5_3:37009889-37009908 None:intergenic 45.0%
TCTTGGAAGTGGGAGAATTG+AGG + chr5_3:37009939-37009958 None:intergenic 45.0%
CATTAGGGCCTATAACTCCA+AGG + chr5_3:37009970-37009989 None:intergenic 45.0%
AGCCAGACACATTATCGTTC+TGG - chr5_3:37010079-37010098 Msa0809760:intron 45.0%
GTGTTTCCGTCTCTTGACTT+TGG + chr5_3:37010201-37010220 None:intergenic 45.0%
!! ATCATTTGGGCTGGTTATCC+TGG - chr5_3:37010370-37010389 Msa0809760:CDS 45.0%
! GTGTTTGGTGACTATAACCC+TGG - chr5_3:37010424-37010443 Msa0809760:intron 45.0%
GTCAGGTTACATCTGGAGAT+TGG - chr5_3:37010538-37010557 Msa0809760:intron 45.0%
TGCACGCAGTTATGTAGTTG+TGG - chr5_3:37010666-37010685 Msa0809760:intron 45.0%
TGCTTACTAAATGGGTGCAC+AGG + chr5_3:37010851-37010870 None:intergenic 45.0%
ATGAGAGCTGATCCATCATC+AGG - chr5_3:37011360-37011379 Msa0809760:intron 45.0%
TAGAAACGGTAGGTTCTACC+GGG + chr5_3:37011390-37011409 None:intergenic 45.0%
GTAGAAACGGTAGGTTCTAC+CGG + chr5_3:37011391-37011410 None:intergenic 45.0%
AGAACCTACCGTTTCTACAC+AGG - chr5_3:37011393-37011412 Msa0809760:intron 45.0%
CCTTTGGACCTGTGTAGAAA+CGG + chr5_3:37011404-37011423 None:intergenic 45.0%
GGTCCAAAGGTCTACGAATT+CGG - chr5_3:37011414-37011433 Msa0809760:intron 45.0%
TAGCCGAATTCGTAGACCTT+TGG + chr5_3:37011420-37011439 None:intergenic 45.0%
AAGGTCTACGAATTCGGCTA+TGG - chr5_3:37011420-37011439 Msa0809760:intron 45.0%
! TGGTTGACTGGTTGATGTGA+AGG + chr5_3:37011497-37011516 None:intergenic 45.0%
GTATCGAATGAGTGGTTGAC+TGG + chr5_3:37011509-37011528 None:intergenic 45.0%
AACCCTACCAACTGTTTCAC+TGG + chr5_3:37011699-37011718 None:intergenic 45.0%
! AGCAAATGAGAGTGGTGTCA+AGG - chr5_3:37011794-37011813 Msa0809760:CDS 45.0%
! AAATGAGAGTGGTGTCAAGG+TGG - chr5_3:37011797-37011816 Msa0809760:CDS 45.0%
!!! TTTTATTGTTTATTTTATAT+TGG - chr5_3:37010789-37010808 Msa0809760:intron 5.0%
!!! TTTATTGTTTATTTTATATT+GGG - chr5_3:37010790-37010809 Msa0809760:intron 5.0%
GCATAAATCCCCTCACAGCA+TGG - chr5_3:37006408-37006427 Msa0809760:three_prime_UTR 50.0%
AAATTGGCCCATGCTGTGAG+GGG + chr5_3:37006419-37006438 None:intergenic 50.0%
GAAAATTGGCCCATGCTGTG+AGG + chr5_3:37006421-37006440 None:intergenic 50.0%
GTGAATCGGCATGAACGAGT+TGG + chr5_3:37006486-37006505 None:intergenic 50.0%
GAGATGTCACAGGAGTAAGG+AGG + chr5_3:37006520-37006539 None:intergenic 50.0%
GAGCCGTGACACAATGTCTT+TGG + chr5_3:37006602-37006621 None:intergenic 50.0%
CATTGTGTCACGGCTCACAT+TGG - chr5_3:37006606-37006625 Msa0809760:CDS 50.0%
TAACTCGGTATACCGAGTCG+AGG + chr5_3:37006673-37006692 None:intergenic 50.0%
ACGGATACGGACATAGACAC+CGG + chr5_3:37007007-37007026 None:intergenic 50.0%
CATCGGAAAACCCCGAGATT+GGG + chr5_3:37007129-37007148 None:intergenic 50.0%
! CGGGGTTTTCCGATGGTATA+TGG - chr5_3:37007134-37007153 Msa0809760:CDS 50.0%
! TGGTTTGAGACCTAGGAGTG+TGG - chr5_3:37007154-37007173 Msa0809760:CDS 50.0%
GAATTGTAGGCCACACTCCT+AGG + chr5_3:37007167-37007186 None:intergenic 50.0%
CTGACGTGACCGAATACTTC+AGG + chr5_3:37007260-37007279 None:intergenic 50.0%
GTGATTGGAACTGAGGCTAG+AGG - chr5_3:37007344-37007363 Msa0809760:intron 50.0%
! GCTAGAGGAGTGTACAATGC+TGG - chr5_3:37007359-37007378 Msa0809760:intron 50.0%
CTTGTCCTCTTCCCCATCTT+GGG + chr5_3:37007436-37007455 None:intergenic 50.0%
TCTTGTCCTCTTCCCCATCT+TGG + chr5_3:37007437-37007456 None:intergenic 50.0%
GGAAGAGGACAAGAAACAGC+TGG - chr5_3:37007443-37007462 Msa0809760:intron 50.0%
! CAAGGGGATTCCTTTGAAGG+TGG - chr5_3:37007518-37007537 Msa0809760:intron 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG + chr5_3:37007745-37007764 None:intergenic 50.0%
!! ATGCACAAGCCGGTTTTGTG+GGG + chr5_3:37007755-37007774 None:intergenic 50.0%
GTGAGCATGGCCTACTTAGT+TGG - chr5_3:37008435-37008454 Msa0809760:CDS 50.0%
GTAGCTGATGTACTTCGAGC+TGG - chr5_3:37008676-37008695 Msa0809760:CDS 50.0%
TGGGCCATGACCATCATTGA+TGG + chr5_3:37009021-37009040 None:intergenic 50.0%
CAGCTTCAAGAGCAAGGTCT+AGG + chr5_3:37009883-37009902 None:intergenic 50.0%
GCTCTTGAAGCTGCAAGAAG+TGG - chr5_3:37009890-37009909 Msa0809760:intron 50.0%
!! ATTGGAGGCATCATTTGGGC+TGG - chr5_3:37010361-37010380 Msa0809760:CDS 50.0%
GCTGGTTATCCTGGTGAAAC+TGG - chr5_3:37010379-37010398 Msa0809760:CDS 50.0%
GGTTATCCTGGTGAAACTGG+TGG - chr5_3:37010382-37010401 Msa0809760:CDS 50.0%
ATCCTGGTGAAACTGGTGGA+AGG - chr5_3:37010386-37010405 Msa0809760:CDS 50.0%
TCCTGGTGAAACTGGTGGAA+GGG - chr5_3:37010387-37010406 Msa0809760:CDS 50.0%
GGTTACATCTGGAGATTGGG+TGG - chr5_3:37010542-37010561 Msa0809760:intron 50.0%
GAGGGAGACTACCAATGACA+TGG - chr5_3:37011295-37011314 Msa0809760:intron 50.0%
GATCCATCATCAGGCTATCC+CGG - chr5_3:37011369-37011388 Msa0809760:intron 50.0%
TGGACCTGTGTAGAAACGGT+AGG + chr5_3:37011400-37011419 None:intergenic 50.0%
CCGTTTCTACACAGGTCCAA+AGG - chr5_3:37011401-37011420 Msa0809760:intron 50.0%
! ACAAATGCTGGAAGCATGGC+TGG - chr5_3:37011621-37011640 Msa0809760:intron 50.0%
! CAAATGCTGGAAGCATGGCT+GGG - chr5_3:37011622-37011641 Msa0809760:intron 50.0%
GGCTTCACAAACAGCAACAC+AGG + chr5_3:37011654-37011673 None:intergenic 50.0%
! GGTAGGGTTTGAGAGTGTGA+CGG - chr5_3:37011710-37011729 Msa0809760:CDS 50.0%
! TTTGAGAGTGTGACGGTGGA+AGG - chr5_3:37011717-37011736 Msa0809760:CDS 50.0%
GAGGTGGAAAGGGTGAAGTT+GGG - chr5_3:37011739-37011758 Msa0809760:CDS 50.0%
GGTGTCAAGGTGGTTGAAGA+AGG - chr5_3:37011807-37011826 Msa0809760:CDS 50.0%
GTCAAGGTGGTTGAAGAAGG+TGG - chr5_3:37011810-37011829 Msa0809760:CDS 50.0%
!! ACGTGGGTTGGAGATGTCAC+AGG + chr5_3:37006530-37006549 None:intergenic 55.0%
ATACCGAGTCGAGGAATGGC+AGG + chr5_3:37006664-37006683 None:intergenic 55.0%
CGGTATACCGAGTCGAGGAA+TGG + chr5_3:37006668-37006687 None:intergenic 55.0%
GTCAGTGTCCTTGTCGTGTC+CGG - chr5_3:37006985-37007004 Msa0809760:CDS 55.0%
CATAGACACCGGACACGACA+AGG + chr5_3:37006996-37007015 None:intergenic 55.0%
CCATCGGAAAACCCCGAGAT+TGG + chr5_3:37007130-37007149 None:intergenic 55.0%
! CCAATCTCGGGGTTTTCCGA+TGG - chr5_3:37007127-37007146 Msa0809760:CDS 55.0%
TGAAACTGGTGGAAGGGCTC+TGG - chr5_3:37010393-37010412 Msa0809760:CDS 55.0%
! GCTCTGGCTCAGGTTGTGTT+TGG - chr5_3:37010409-37010428 Msa0809760:CDS 55.0%
! CAGTGTTACTGCACGCAGTC+AGG - chr5_3:37010521-37010540 Msa0809760:intron 55.0%
GCACGCAGTCAGGTTACATC+TGG - chr5_3:37010531-37010550 Msa0809760:intron 55.0%
CTACCGGGATAGCCTGATGA+TGG + chr5_3:37011375-37011394 None:intergenic 55.0%
! AGGGTTTGAGAGTGTGACGG+TGG - chr5_3:37011713-37011732 Msa0809760:CDS 55.0%
ACGGTGGAAGGAGGTGGAAA+GGG - chr5_3:37011729-37011748 Msa0809760:CDS 55.0%
GGAGGTGGAAAGGGTGAAGT+TGG - chr5_3:37011738-37011757 Msa0809760:CDS 55.0%
GCTCCTGCCATTCCTCGACT+CGG - chr5_3:37006658-37006677 Msa0809760:CDS 60.0%
AGGGACCCAAGATGGGGAAG+AGG - chr5_3:37007428-37007447 Msa0809760:intron 60.0%
GCCCTTCCACCAGTTTCACC+AGG + chr5_3:37010391-37010410 None:intergenic 60.0%
! GAGAGTGTGACGGTGGAAGG+AGG - chr5_3:37011720-37011739 Msa0809760:CDS 60.0%
AGTGTGACGGTGGAAGGAGG+TGG - chr5_3:37011723-37011742 Msa0809760:CDS 60.0%
GACGGTGGAAGGAGGTGGAA+AGG - chr5_3:37011728-37011747 Msa0809760:CDS 60.0%
!! GTCGGTGTCGGACACGACAC+GGG + chr5_3:37006913-37006932 None:intergenic 65.0%
!! CGTCGGTGTCGGACACGACA+CGG + chr5_3:37006914-37006933 None:intergenic 65.0%
! TGGTGGAAGGGCTCTGGCTC+AGG - chr5_3:37010399-37010418 Msa0809760:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 37006349 37012120 37006349 ID=Msa0809760;Name=Msa0809760
chr5_3 mRNA 37006349 37012120 37006349 ID=Msa0809760-mRNA-1;Parent=Msa0809760;Name=Msa0809760-mRNA-1;_AED=0.33;_eAED=0.33;_QI=78|1|1|1|1|1|6|236|779
chr5_3 exon 37006349 37007174 37006349 ID=Msa0809760-mRNA-1:exon:11495;Parent=Msa0809760-mRNA-1
chr5_3 exon 37008024 37008788 37008024 ID=Msa0809760-mRNA-1:exon:11494;Parent=Msa0809760-mRNA-1
chr5_3 exon 37009772 37009869 37009772 ID=Msa0809760-mRNA-1:exon:11493;Parent=Msa0809760-mRNA-1
chr5_3 exon 37010262 37010431 37010262 ID=Msa0809760-mRNA-1:exon:11492;Parent=Msa0809760-mRNA-1
chr5_3 exon 37010823 37011125 37010823 ID=Msa0809760-mRNA-1:exon:11491;Parent=Msa0809760-mRNA-1
chr5_3 exon 37011629 37012120 37011629 ID=Msa0809760-mRNA-1:exon:11490;Parent=Msa0809760-mRNA-1
chr5_3 five_prime_UTR 37012043 37012120 37012043 ID=Msa0809760-mRNA-1:five_prime_utr;Parent=Msa0809760-mRNA-1
chr5_3 CDS 37011629 37012042 37011629 ID=Msa0809760-mRNA-1:cds;Parent=Msa0809760-mRNA-1
chr5_3 CDS 37010823 37011125 37010823 ID=Msa0809760-mRNA-1:cds;Parent=Msa0809760-mRNA-1
chr5_3 CDS 37010262 37010431 37010262 ID=Msa0809760-mRNA-1:cds;Parent=Msa0809760-mRNA-1
chr5_3 CDS 37009772 37009869 37009772 ID=Msa0809760-mRNA-1:cds;Parent=Msa0809760-mRNA-1
chr5_3 CDS 37008024 37008788 37008024 ID=Msa0809760-mRNA-1:cds;Parent=Msa0809760-mRNA-1
chr5_3 CDS 37006585 37007174 37006585 ID=Msa0809760-mRNA-1:cds;Parent=Msa0809760-mRNA-1
chr5_3 three_prime_UTR 37006349 37006584 37006349 ID=Msa0809760-mRNA-1:three_prime_utr;Parent=Msa0809760-mRNA-1
Gene Sequence

>Msa0809760

ATGGGCCAATTTTCCATCACCATTACTTTCATTTTTCTCTTCTTAACTCGCTACAACCAACTCGTTCATGCCGATTCACCGATTAATGTACCTCCTTACTCCTGTGACATCTCCAACCCACGTACAAAATTCTTCCCCTTTTGCAATGTCAACCTTACCATCACTCAAAGAGCCAAAGACATTGTGTCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGGTATACCGAGTTATCAATGGTGGAATGAAGCTTTGCACGGTGTTTCTTATGTTGGTAAGGGGATAAGATTGAATGGTAGTGTTACAGCTGCAACTAGTTTCCCTCAAATCATTCTTACGGCTGCTTCTTTTGATCCCAAACTTTGGTACCGAATCAGTAAGGTGATTGGAACTGAGGCTAGAGGAGTGTACAATGCTGGACAAGCTCAAGGGATGACTTTTTGGGCACCAAACATAAACATATTTAGGGACCCAAGATGGGGAAGAGGACAAGAAACAGCTGGAGAAGATCCTTTGGTAAATTCAAAGTATGGTGTTTCTTATGTGAGAGGACTTCAAGGGGATTCCTTTGAAGGTGGAAAACTAATTGGAGGTCGTCTTAAAGCTTCTGCTTGTTGCAAACACTTTACTGCCTATGATTTGGAAAATTGGAAGGGTGTGAATCGTTATGTTTTTGATGCCAAAGTTACTTTACAAGATTTGGCGGATACGTATCAACCCTCGTTTCATAGTTGCATACAACAAGGACGATCTAGTGGAATAATGTGTGCTTACAACCGTGTCAATGGAGTTCCAAACTGTGCAGATTACAATCTTTTAACCAATACGGCAAGGAAAAAATGGAAGTTCAATGGGTATATTGCGTCGGATTGTGACGCAGTTCGATTCATATATGAAAAACAAGGTTATGCAAAAACACCAGAGGATGTTGTAGCTGATGTACTTCGAGCTGGGATGGATTTAGAGTGTGGTGATTACATGACAAAGCATGCAAAGTCAGCAGTTTTACAAAAAAAAGTACCTATATCTCAAATCGACCGTGCCCTACACAATCTGTTTACCATTAGAATAAGACTAGGCTTGTTTGATGGGAATCCAACCAAACTCCAATATGGCAGAATTGGTCGAAATCAAGTATGCTCTAAAGAAAACCTAGACCTTGCTCTTGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCAATAGTTCTTTTAGCAAACTATTTTGGTCCTCCTTGTAAACAAGTATCCATATTAAAAGGCTTTTACAGTTATGCTAGCCAGACACATTATCGTTCTGGATGTACTGATGGAGTAAAGTGTGCTTCAGCTGAAATTGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGACCAAAGTCAAGAGACGGAAACACTTGATAGAGTTCATTTAGAGTTACCTGGTAAGCAACAGAAACTTATTAACAGTGTTGCTAAAGCTTCTAAGAAGCCTGTTATTTTGGTAATATTGTGTGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGCATCATTTGGGCTGGTTATCCTGGTGAAACTGGTGGAAGGGCTCTGGCTCAGGTTGTGTTTGGTGACTATAACCCTGGAGGGAGACTACCAATGACATGGTACCCAAAAGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCATCATCAGGCTATCCCGGTAGAACCTACCGTTTCTACACAGGTCCAAAGGTCTACGAATTCGGCTATGGCCTAAGCTACTCAAATTATTCCTACAACTTCATTTCCGTCAAAAACAACAACCTTCACATCAACCAGTCAACCACTCATTCGATACTCGAAAACTCTGAAACAATCCGTTACAAACTTGTTTCAGAGTTAGGCAAAAAAGCATGTAAAACCATGTCCATTTCTGTAACATTGGGAATTACAAATGCTGGAAGCATGGCTGGGAAACATCCTGTGTTGCTGTTTGTGAAGCCAAAGAAAGGTAGAAATGGAAATCCAGTGAAACAGTTGGTAGGGTTTGAGAGTGTGACGGTGGAAGGAGGTGGAAAGGGTGAAGTTGGGTTCGAAGTTAGTGTTTGTGAGCATCTTAGTAGAGCAAATGAGAGTGGTGTCAAGGTGGTTGAAGAAGGTGGTTATTTGTTGGTTGTGGGAGAGGAAGAGTACTCAATAAGTATCACTCTTTGA
Protein sequence

>Msa0809760

MGQFSITITFIFLFLTRYNQLVHADSPINVPPYSCDISNPRTKFFPFCNVNLTITQRAKDIVSRLTLDEKISQLVNTAPAIPRLGIPSYQWWNEALHGVSYVGKGIRLNGSVTAATSFPQIILTAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLENWKGVNRYVFDAKVTLQDLADTYQPSFHSCIQQGRSSGIMCAYNRVNGVPNCADYNLLTNTARKKWKFNGYIASDCDAVRFIYEKQGYAKTPEDVVADVLRAGMDLECGDYMTKHAKSAVLQKKVPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGRIGRNQVCSKENLDLALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSIVLLANYFGPPCKQVSILKGFYSYASQTHYRSGCTDGVKCASAEIDRAVEVAKISDYVILVMGLDQSQETETLDRVHLELPGKQQKLINSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGETGGRALAQVVFGDYNPGGRLPMTWYPKDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNFISVKNNNLHINQSTTHSILENSETIRYKLVSELGKKACKTMSISVTLGITNAGSMAGKHPVLLFVKPKKGRNGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVVEEGGYLLVVGEEEYSISITL*