AlfalfaGEDB | Msa0814720

M. sativa cultivar zhongmu-4 / Msa0814720

KEGG: K06688
GO: GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007088 GO:0007346 GO:0008150 GO:0008152 GO:0008283 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0010564 GO:0010965 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030071 GO:0030163 GO:0031145 GO:0031625 GO:0032446 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0036211 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051603 GO:0051726 GO:0051783 GO:0051983 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901990 GO:1902099 GO:1905818
PFAM: PF00179.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0814720	XP_003610967.1	98.305	177	3	0	1	177	1	177	2.02e-127	365

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0814720	sp\|Q9LJZ5\|UBC19_ARATH	85.256	156	23	0	18	173	22	177	1.43e-98	285

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0814720	G7K9A0	98.305	177	3	0	1	177	1	177	9.63e-128	365

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0712040	Msa0814720	0.857392	1.683890e-62	-8.615850e-47
Msa0749980	Msa0814720	0.889396	2.514564e-73	-8.615850e-47
Msa0814720	Msa0846900	0.803032	4.229671e-49	-8.615850e-47
Msa0186180	Msa0814720	0.822513	2.275057e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0814720	MtrunA17_Chr5g0396451	98.305	177	3	0	1	177	1	177	1.85e-131	365
Msa0814720	MtrunA17_Chr4g0038891	85.876	177	25	0	1	177	1	177	5.36e-115	323
Msa0814720	MtrunA17_Chr1g0199951	64.286	168	59	1	6	172	15	182	4.38e-74	221
Msa0814720	MtrunA17_Chr4g0060351	45.652	138	74	1	35	171	7	144	6.73e-39	130
Msa0814720	MtrunA17_Chr8g0362321	44.928	138	75	1	35	171	7	144	8.64e-39	129
Msa0814720	MtrunA17_Chr2g0316201	46.094	128	69	0	35	162	8	135	9.00e-36	122
Msa0814720	MtrunA17_Chr2g0316211	45.669	127	69	0	36	162	9	135	5.00e-35	120
Msa0814720	MtrunA17_Chr8g0369311	41.606	137	79	1	29	164	54	190	1.46e-32	115
Msa0814720	MtrunA17_Chr4g0037011	43.089	123	70	0	35	157	4	126	2.96e-32	113
Msa0814720	MtrunA17_Chr3g0108261	41.406	128	75	0	35	162	4	131	4.33e-32	112
Msa0814720	MtrunA17_Chr5g0432831	41.406	128	75	0	35	162	4	131	4.33e-32	112
Msa0814720	MtrunA17_Chr7g0275361	40.458	131	77	1	35	164	4	134	9.75e-32	111
Msa0814720	MtrunA17_Chr1g0154011	41.406	128	75	0	35	162	4	131	2.10e-31	110
Msa0814720	MtrunA17_Chr4g0031181	35.252	139	76	2	49	173	22	160	4.83e-26	97.8
Msa0814720	MtrunA17_Chr8g0378601	37.097	124	78	0	35	158	25	148	2.20e-24	93.6
Msa0814720	MtrunA17_Chr3g0131871	38.211	123	74	2	36	156	6	128	7.78e-24	92.8
Msa0814720	MtrunA17_Chr2g0328001	35.115	131	71	2	57	173	30	160	5.21e-23	89.7
Msa0814720	MtrunA17_Chr3g0139901	36.607	112	70	1	47	157	20	131	2.29e-22	87.8
Msa0814720	MtrunA17_Chr5g0401831	34.932	146	87	3	36	173	8	153	2.42e-21	85.5
Msa0814720	MtrunA17_Chr4g0053191	35.915	142	83	3	36	169	8	149	3.67e-21	84.7
Msa0814720	MtrunA17_Chr4g0059291	36.000	125	75	4	35	157	6	127	2.67e-20	83.2
Msa0814720	MtrunA17_Chr8g0348701	34.400	125	77	4	35	157	6	127	4.06e-18	77.4
Msa0814720	MtrunA17_Chr5g0403591	31.746	126	85	1	36	161	33	157	6.68e-18	77.0
Msa0814720	MtrunA17_Chr8g0387131	34.400	125	77	4	35	157	6	127	2.34e-17	75.5
Msa0814720	MtrunA17_Chr7g0254701	30.496	141	97	1	32	171	10	150	2.54e-16	74.3
Msa0814720	MtrunA17_Chr8g0372391	36.364	99	61	2	36	133	19	116	1.51e-15	70.1
Msa0814720	MtrunA17_Chr5g0404931	36.364	99	61	2	36	133	19	116	4.13e-14	66.6
Msa0814720	MtrunA17_Chr8g0345331	32.759	116	69	3	31	141	4	115	4.14e-11	59.7
Msa0814720	MtrunA17_Chr4g0068301	29.688	128	74	4	33	155	11	127	8.03e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0814720	AT3G20060.1	85.256	156	23	0	18	173	22	177	1.46e-99	285
Msa0814720	AT1G50490.1	85.000	160	24	0	18	177	21	180	9.45e-94	270
Msa0814720	AT3G20060.2	87.879	132	16	0	42	173	1	132	2.88e-87	252
Msa0814720	AT1G14400.1	44.928	138	75	1	35	171	7	144	4.90e-38	128
Msa0814720	AT1G14400.2	44.928	138	75	1	35	171	7	144	4.90e-38	128
Msa0814720	AT2G02760.1	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0814720	AT2G02760.2	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0814720	AT2G02760.4	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0814720	AT2G02760.3	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0814720	AT5G62540.1	45.775	142	75	2	30	169	2	143	6.20e-37	125
Msa0814720	AT1G78870.2	46.094	128	69	0	35	162	8	135	1.27e-35	122
Msa0814720	AT1G16890.2	45.312	128	70	0	35	162	8	135	5.55e-35	120
Msa0814720	AT1G16890.3	46.923	130	67	1	35	162	15	144	4.07e-34	118
Msa0814720	AT5G56150.1	42.188	128	74	0	35	162	4	131	2.16e-32	113
Msa0814720	AT2G16740.1	39.706	136	81	1	35	169	4	139	3.67e-32	113
Msa0814720	AT1G64230.2	41.406	128	75	0	35	162	4	131	7.41e-32	112
Msa0814720	AT1G64230.1	41.406	128	75	0	35	162	4	131	7.41e-32	112
Msa0814720	AT4G27960.1	40.625	128	76	0	35	162	4	131	1.19e-31	112
Msa0814720	AT3G08700.2	40.580	138	80	2	35	170	4	141	1.54e-31	111
Msa0814720	AT3G08700.1	40.580	138	80	2	35	170	4	141	1.54e-31	111
Msa0814720	AT3G08690.2	41.935	124	72	0	35	158	4	127	3.76e-31	110
Msa0814720	AT3G08690.1	41.935	124	72	0	35	158	4	127	3.76e-31	110
Msa0814720	AT5G41700.5	39.844	128	77	0	35	162	4	131	5.56e-31	110
Msa0814720	AT5G41700.2	39.844	128	77	0	35	162	4	131	5.56e-31	110
Msa0814720	AT5G41700.1	39.844	128	77	0	35	162	4	131	5.56e-31	110
Msa0814720	AT5G53300.2	39.844	128	77	0	35	162	4	131	6.06e-31	110
Msa0814720	AT5G53300.4	39.844	128	77	0	35	162	4	131	6.06e-31	110
Msa0814720	AT5G53300.1	39.844	128	77	0	35	162	4	131	6.06e-31	110
Msa0814720	AT4G27960.2	40.625	128	76	0	35	162	34	161	1.63e-30	109
Msa0814720	AT1G16890.1	51.579	95	46	0	68	162	8	102	1.23e-29	105
Msa0814720	AT1G78870.4	51.579	95	46	0	68	162	8	102	1.48e-29	105
Msa0814720	AT5G41700.4	39.535	129	77	1	35	162	4	132	6.66e-29	104
Msa0814720	AT1G64230.3	38.686	137	75	1	35	162	4	140	1.24e-28	104
Msa0814720	AT1G78870.3	45.714	105	57	0	35	139	8	112	3.31e-28	102
Msa0814720	AT1G64230.5	42.727	110	62	1	56	164	67	176	4.22e-28	103
Msa0814720	AT1G64230.4	42.727	110	62	1	56	164	67	176	4.22e-28	103
Msa0814720	AT1G78870.1	51.042	96	46	1	68	162	8	103	6.37e-28	101
Msa0814720	AT3G13550.1	37.500	136	85	0	35	170	39	174	3.56e-26	99.0
Msa0814720	AT1G36340.2	40.876	137	79	2	26	162	3	137	1.83e-25	96.3
Msa0814720	AT1G36340.1	40.876	137	79	2	26	162	3	137	1.83e-25	96.3
Msa0814720	AT5G50870.1	40.000	135	73	4	34	166	4	132	1.89e-25	97.1
Msa0814720	AT5G50870.2	41.129	124	68	3	34	155	4	124	2.70e-25	97.1
Msa0814720	AT5G56150.2	41.000	100	59	0	35	134	4	103	7.43e-24	90.9
Msa0814720	AT3G55380.1	33.813	139	78	2	49	173	23	161	4.13e-23	90.5
Msa0814720	AT3G13550.2	39.091	110	67	0	35	144	39	148	6.83e-23	90.1
Msa0814720	AT5G59300.1	34.351	131	72	2	57	173	30	160	1.03e-22	89.4
Msa0814720	AT5G41700.3	38.462	104	64	0	35	138	4	107	1.36e-22	88.6
Msa0814720	AT3G46460.1	33.813	139	78	2	49	173	22	160	1.75e-22	89.0
Msa0814720	AT5G25760.1	36.290	124	73	2	35	157	13	131	2.58e-22	88.2
Msa0814720	AT5G25760.2	36.290	124	73	2	35	157	13	131	2.58e-22	88.2
Msa0814720	AT5G53300.3	38.384	99	61	0	35	133	4	102	5.37e-22	85.9
Msa0814720	AT1G63800.1	38.400	125	72	4	35	157	6	127	9.53e-22	87.4
Msa0814720	AT5G41340.1	37.600	125	73	4	35	157	6	127	6.61e-21	85.1
Msa0814720	AT3G57870.1	35.915	142	83	3	36	169	9	150	3.99e-20	82.4
Msa0814720	AT2G18600.1	33.333	153	92	5	7	157	11	155	1.75e-19	81.6
Msa0814720	AT2G18600.2	33.333	153	92	5	7	157	11	155	1.75e-19	81.6
Msa0814720	AT1G63800.2	40.217	92	53	2	68	157	21	112	2.11e-19	80.9
Msa0814720	AT2G46030.5	36.000	125	75	4	35	157	6	127	6.23e-19	80.1
Msa0814720	AT2G46030.1	36.000	125	75	4	35	157	6	127	6.23e-19	80.1
Msa0814720	AT2G46030.3	36.000	125	75	4	35	157	78	199	4.41e-18	79.3
Msa0814720	AT4G36800.2	31.061	132	89	2	27	157	24	154	2.30e-17	75.9
Msa0814720	AT4G36800.1	31.061	132	89	2	27	157	24	154	2.30e-17	75.9
Msa0814720	AT5G05080.2	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0814720	AT5G05080.3	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0814720	AT5G05080.1	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0814720	AT5G05080.4	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0814720	AT5G41340.2	40.000	85	49	2	75	157	8	92	2.89e-16	72.4
Msa0814720	AT3G24515.1	32.484	157	86	5	36	173	10	165	3.97e-16	75.5
Msa0814720	AT2G46030.4	35.644	101	63	2	59	157	30	130	4.79e-16	72.4
Msa0814720	AT2G46030.2	35.644	101	63	2	59	157	30	130	4.79e-16	72.4
Msa0814720	AT3G46460.3	33.333	111	60	2	77	173	8	118	6.79e-16	70.5
Msa0814720	AT3G46460.2	33.333	111	60	2	77	173	8	118	6.79e-16	70.5
Msa0814720	AT3G55380.2	26.590	173	79	3	49	173	23	195	8.45e-16	72.0
Msa0814720	AT3G24515.3	35.652	115	65	3	68	173	76	190	9.41e-16	74.3
Msa0814720	AT1G75440.1	33.333	111	72	2	24	133	7	116	2.95e-14	67.4
Msa0814720	AT1G45050.1	32.432	111	73	2	24	133	7	116	4.17e-14	67.0
Msa0814720	AT4G36410.1	34.286	105	67	2	30	133	13	116	9.83e-14	65.9
Msa0814720	AT5G42990.1	32.432	111	73	2	24	133	7	116	1.82e-13	65.1
Msa0814720	AT2G32790.1	35.246	122	76	1	53	174	51	169	1.32e-12	63.2

Find 60 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATTCTTCTTTGGAGCTTT+GGG	0.197325	5_3:-47045193	Msa0814720:three_prime_UTR
TTTATTCTTCTTTGGAGCTT+TGG	0.226931	5_3:-47045194	Msa0814720:three_prime_UTR
TTGACCTTTGGAGCCTTAAA+AGG	0.231384	5_3:+47045926	None:intergenic
GATTGAGTGTCAACGGATTT+AGG	0.260118	5_3:+47046792	None:intergenic
TTTCATCCTTTCCTTTGCTT+TGG	0.272896	5_3:-47045289	Msa0814720:three_prime_UTR
TCTTTCTCTTTCTCTTTCAA+TGG	0.299312	5_3:-47046883	Msa0814720:exon
TGATTTCTCTTCTCTATGTC+TGG	0.334622	5_3:-47045359	Msa0814720:three_prime_UTR
CACAATATATTGTCCTCTTC+AGG	0.336865	5_3:+47046034	None:intergenic
CAGGTTGCAGTCTGAATTGA+TGG	0.339528	5_3:-47046368	Msa0814720:CDS
TATTTGCCTGGACATTCTTC+AGG	0.340447	5_3:-47045858	Msa0814720:intron
TGGCAGATGAGTGGAGATTC+TGG	0.360212	5_3:-47046070	Msa0814720:intron
TGTCTGGTTGTGATCTGCTT+TGG	0.374694	5_3:-47045343	Msa0814720:three_prime_UTR
AAAGTGAAAAGTAAAATAAA+AGG	0.386904	5_3:+47045053	None:intergenic
GTGGTGTCAAATTTGACCTT+TGG	0.405768	5_3:+47045914	None:intergenic
TTGCCATGCAAATCAACATT+GGG	0.409629	5_3:+47045881	None:intergenic
ATCCACAGGCAGCACAGCTT+TGG	0.411990	5_3:-47045545	Msa0814720:CDS
GTCTGAATTGATGGCTTTGA+TGG	0.419788	5_3:-47046359	Msa0814720:intron
TTTAGCGGCGAGCTAATGTT+TGG	0.426525	5_3:+47045567	None:intergenic
CACCCCAATGTTGATTTGCA+TGG	0.432591	5_3:-47045884	Msa0814720:CDS
GGAGGGAGAGGTTGCATTGA+AGG	0.440179	5_3:+47046816	None:intergenic
ACACTCAATCTGTTCTCAAA+AGG	0.451346	5_3:-47046779	Msa0814720:intron
AATAGAGAAACAATCATGTA+TGG	0.452980	5_3:+47045260	None:intergenic
AGCCTTAAAAGGATACTCAT+TGG	0.457477	5_3:+47045937	None:intergenic
ACTTTACTTCTACAGAATAC+AGG	0.462310	5_3:-47045441	Msa0814720:intron
GCCTTAAAAGGATACTCATT+GGG	0.466815	5_3:+47045938	None:intergenic
AGCAAAGACACTGTCTTTGA+AGG	0.498680	5_3:-47045989	Msa0814720:CDS
TTTCAAATTTACCTCCTAGC+AGG	0.498899	5_3:+47045669	None:intergenic
TGCTGCTTAAACTTTGATCT+CGG	0.504605	5_3:-47045389	Msa0814720:exon
TATTCTTCTTTGGAGCTTTG+GGG	0.507539	5_3:-47045192	Msa0814720:three_prime_UTR
TGCTGGAAAGGAACAATAGC+AGG	0.507664	5_3:-47046013	Msa0814720:CDS
GTGTCAACGGATTTAGGCGG+AGG	0.521333	5_3:+47046798	None:intergenic
TTTATTTACACCACAACACT+TGG	0.523262	5_3:-47045023	Msa0814720:three_prime_UTR
TTTGCATGGCAATATTTGCC+TGG	0.525403	5_3:-47045870	Msa0814720:CDS
GACAATATATTGTGCTGGAA+AGG	0.525589	5_3:-47046025	Msa0814720:CDS
CTCCAAAGCTGTGCTGCCTG+TGG	0.525701	5_3:+47045543	None:intergenic
AAGAGGACAATATATTGTGC+TGG	0.531992	5_3:-47046030	Msa0814720:CDS
ACGGATTTAGGCGGAGGGAG+AGG	0.544685	5_3:+47046804	None:intergenic
TCATTACCTGAAGAATGTCC+AGG	0.544726	5_3:+47045852	None:intergenic
GAGAACAGATTGAGTGTCAA+CGG	0.546293	5_3:+47046785	None:intergenic
TTGTCAATTCAAAGCCTGCT+AGG	0.548402	5_3:-47045683	Msa0814720:CDS
GAGATCAAAGTTTAAGCAGC+AGG	0.549093	5_3:+47045391	None:intergenic
ATTCTTCTTTGGAGCTTTGG+GGG	0.562565	5_3:-47045191	Msa0814720:three_prime_UTR
TATGGAAAATTCCAAAGCAA+AGG	0.569032	5_3:+47045278	None:intergenic
TGTGCTGCCTGTGGATTTAG+CGG	0.580376	5_3:+47045552	None:intergenic
ATTGCCATGCAAATCAACAT+TGG	0.581157	5_3:+47045880	None:intergenic
GATCTGCTTTGGAAAAGAGA+AGG	0.581476	5_3:-47045332	Msa0814720:three_prime_UTR
AAAATTCCAAAGCAAAGGAA+AGG	0.586656	5_3:+47045283	None:intergenic
TTCTACAGAATACAGGAAGA+TGG	0.589700	5_3:-47045434	Msa0814720:intron
GTGATTATTTGGCAGATGAG+TGG	0.606809	5_3:-47046079	Msa0814720:intron
TAGCTCGCCGCTAAATCCAC+AGG	0.611347	5_3:-47045559	Msa0814720:CDS
CAGCTTTGGAGCAATCAAGA+AGG	0.619795	5_3:-47045531	Msa0814720:intron
ATCTGCTTTGGAAAAGAGAA+GGG	0.635430	5_3:-47045331	Msa0814720:three_prime_UTR
TACAGAATACAGGAAGATGG+TGG	0.637677	5_3:-47045431	Msa0814720:intron
TCAATTCAAAGCCTGCTAGG+AGG	0.657162	5_3:-47045680	Msa0814720:intron
TGTCAACGGATTTAGGCGGA+GGG	0.657757	5_3:+47046799	None:intergenic
ATAATGAATACCAAGTGTTG+TGG	0.673322	5_3:+47045013	None:intergenic
CATGCAAATCAACATTGGGG+TGG	0.679728	5_3:+47045885	None:intergenic
TGAGTGTCAACGGATTTAGG+CGG	0.688984	5_3:+47046795	None:intergenic
TGCCATGCAAATCAACATTG+GGG	0.689638	5_3:+47045882	None:intergenic
AACATTGGGGTGGAAGCATG+TGG	0.689650	5_3:+47045895	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAATTTACTTAATTTTG+GGG	-	chr5_3:47045403-47045422	Msa0814720:CDS	10.0%
!!!	CTTTTTAATTTACTTAATTT+TGG	-	chr5_3:47045473-47045492	Msa0814720:intron	10.0%
!!!	GTTTAGTTAATTTAAAATAT+TGG	-	chr5_3:47045527-47045546	Msa0814720:intron	10.0%
!!	TCAAAAAAAACAAAAAATAT+TGG	-	chr5_3:47045562-47045581	Msa0814720:CDS	10.0%
!!!	TTTTAATTTACTTAATTTTG+GGG	-	chr5_3:47045403-47045422	Msa0814720:CDS	10.0%
!!!	CTTTTTAATTTACTTAATTT+TGG	-	chr5_3:47045473-47045492	Msa0814720:intron	10.0%
!!!	GTTTAGTTAATTTAAAATAT+TGG	-	chr5_3:47045527-47045546	Msa0814720:intron	10.0%
!!	TCAAAAAAAACAAAAAATAT+TGG	-	chr5_3:47045562-47045581	Msa0814720:CDS	10.0%
!!!	TGTTGATTGAATTAAAATTT+AGG	-	chr5_3:47045376-47045395	Msa0814720:three_prime_UTR	15.0%
!!	GTTGATTGAATTAAAATTTA+GGG	-	chr5_3:47045377-47045396	Msa0814720:three_prime_UTR	15.0%
!!!	AGTTAATTTAAAATATTGGT+AGG	-	chr5_3:47045531-47045550	Msa0814720:intron	15.0%
!!!	GTTAATTTAAAATATTGGTA+GGG	-	chr5_3:47045532-47045551	Msa0814720:CDS	15.0%
!!	AAAAAACAAAAAATATTGGT+AGG	-	chr5_3:47045566-47045585	Msa0814720:CDS	15.0%
!!	AAAAACAAAAAATATTGGTA+GGG	-	chr5_3:47045567-47045586	Msa0814720:CDS	15.0%
!!	AATTCATTAATGTGATTATT+TGG	-	chr5_3:47045831-47045850	Msa0814720:intron	15.0%
!!	ATTCATTAATGTGATTATTT+GGG	-	chr5_3:47045832-47045851	Msa0814720:intron	15.0%
!!	AATTCATTAATGTGATTATT+TGG	-	chr5_3:47045831-47045850	Msa0814720:intron	15.0%
!!!	AATTGATTAATCTGTTTTAT+AGG	-	chr5_3:47046285-47046304	Msa0814720:intron	15.0%
!!	AAAAATACAATTAACAAACA+GGG	+	chr5_3:47046422-47046441	None:intergenic	15.0%
!!	TAAAAATACAATTAACAAAC+AGG	+	chr5_3:47046423-47046442	None:intergenic	15.0%
!!!	TAGATTATTTTATTCTTCTT+TGG	-	chr5_3:47046827-47046846	Msa0814720:CDS	15.0%
!!	AAAGTGAAAAGTAAAATAAA+AGG	+	chr5_3:47046979-47046998	None:intergenic	15.0%
!!!	TGTTGATTGAATTAAAATTT+AGG	-	chr5_3:47045376-47045395	Msa0814720:three_prime_UTR	15.0%
!!	GTTGATTGAATTAAAATTTA+GGG	-	chr5_3:47045377-47045396	Msa0814720:three_prime_UTR	15.0%
!!!	AGTTAATTTAAAATATTGGT+AGG	-	chr5_3:47045531-47045550	Msa0814720:intron	15.0%
!!!	GTTAATTTAAAATATTGGTA+GGG	-	chr5_3:47045532-47045551	Msa0814720:CDS	15.0%
!!	AAAAAACAAAAAATATTGGT+AGG	-	chr5_3:47045566-47045585	Msa0814720:CDS	15.0%
!!	AAAAACAAAAAATATTGGTA+GGG	-	chr5_3:47045567-47045586	Msa0814720:CDS	15.0%
!!	AATTCATTAATGTGATTATT+TGG	-	chr5_3:47045831-47045850	Msa0814720:intron	15.0%
!!	ATTCATTAATGTGATTATTT+GGG	-	chr5_3:47045832-47045851	Msa0814720:intron	15.0%
!!	AATTCATTAATGTGATTATT+TGG	-	chr5_3:47045831-47045850	Msa0814720:intron	15.0%
!!!	AATTGATTAATCTGTTTTAT+AGG	-	chr5_3:47046285-47046304	Msa0814720:intron	15.0%
!!	AAAAATACAATTAACAAACA+GGG	+	chr5_3:47046422-47046441	None:intergenic	15.0%
!!	TAAAAATACAATTAACAAAC+AGG	+	chr5_3:47046423-47046442	None:intergenic	15.0%
!!!	TAGATTATTTTATTCTTCTT+TGG	-	chr5_3:47046827-47046846	Msa0814720:CDS	15.0%
!!	AAAGTGAAAAGTAAAATAAA+AGG	+	chr5_3:47046979-47046998	None:intergenic	15.0%
!!!	TTGTTGGTTAAATTAAAGTT+AGG	-	chr5_3:47045438-47045457	Msa0814720:intron	20.0%
!!!	TGTTGGTTAAATTAAAGTTA+GGG	-	chr5_3:47045439-47045458	Msa0814720:intron	20.0%
!!!	ACTTAATTTTGGGAATTAAT+TGG	-	chr5_3:47045484-47045503	Msa0814720:intron	20.0%
!!	AAAATTGAGTTAGTTAGATT+AGG	+	chr5_3:47045609-47045628	None:intergenic	20.0%
!!	GACTTAAAAAAGTAATTAGA+TGG	-	chr5_3:47045782-47045801	Msa0814720:intron	20.0%
!!	AAAAAGTAATTAGATGGTAA+TGG	-	chr5_3:47045788-47045807	Msa0814720:intron	20.0%
!!	AAAAGTAATTAGATGGTAAT+GGG	-	chr5_3:47045789-47045808	Msa0814720:intron	20.0%
!!!	AATCTGTTTTATAGGATAAA+TGG	-	chr5_3:47046293-47046312	Msa0814720:intron	20.0%
!!!	AAGTGTTATATTATTGATTC+AGG	+	chr5_3:47046386-47046405	None:intergenic	20.0%
!!!	TTGTTGGTTAAATTAAAGTT+AGG	-	chr5_3:47045438-47045457	Msa0814720:intron	20.0%
!!!	TGTTGGTTAAATTAAAGTTA+GGG	-	chr5_3:47045439-47045458	Msa0814720:intron	20.0%
!!!	ACTTAATTTTGGGAATTAAT+TGG	-	chr5_3:47045484-47045503	Msa0814720:intron	20.0%
!!	AAAATTGAGTTAGTTAGATT+AGG	+	chr5_3:47045609-47045628	None:intergenic	20.0%
!!	GACTTAAAAAAGTAATTAGA+TGG	-	chr5_3:47045782-47045801	Msa0814720:intron	20.0%
!!	AAAAAGTAATTAGATGGTAA+TGG	-	chr5_3:47045788-47045807	Msa0814720:intron	20.0%
!!	AAAAGTAATTAGATGGTAAT+GGG	-	chr5_3:47045789-47045808	Msa0814720:intron	20.0%
!!!	AATCTGTTTTATAGGATAAA+TGG	-	chr5_3:47046293-47046312	Msa0814720:intron	20.0%
!!!	AAGTGTTATATTATTGATTC+AGG	+	chr5_3:47046386-47046405	None:intergenic	20.0%
!	TTAAAAGAAATCAAACCCTT+CGG	-	chr5_3:47045327-47045346	Msa0814720:three_prime_UTR	25.0%
!!!	GATAAATTTTGGGGATTAAT+GGG	-	chr5_3:47045349-47045368	Msa0814720:three_prime_UTR	25.0%
!!!	TTAGTTTGTATGAAATCAGT+TGG	-	chr5_3:47045904-47045923	Msa0814720:CDS	25.0%
!!	TAGTTTGTATGAAATCAGTT+GGG	-	chr5_3:47045905-47045924	Msa0814720:CDS	25.0%
!	AATAGAGAAACAATCATGTA+TGG	+	chr5_3:47046772-47046791	None:intergenic	25.0%
!	TTAAAAGAAATCAAACCCTT+CGG	-	chr5_3:47045327-47045346	Msa0814720:three_prime_UTR	25.0%
!!!	GATAAATTTTGGGGATTAAT+GGG	-	chr5_3:47045349-47045368	Msa0814720:three_prime_UTR	25.0%
!!!	TTAGTTTGTATGAAATCAGT+TGG	-	chr5_3:47045904-47045923	Msa0814720:CDS	25.0%
!!	TAGTTTGTATGAAATCAGTT+GGG	-	chr5_3:47045905-47045924	Msa0814720:CDS	25.0%
!	AATAGAGAAACAATCATGTA+TGG	+	chr5_3:47046772-47046791	None:intergenic	25.0%
!!	AGCGATTGATTTTCGATTTA+GGG	+	chr5_3:47045107-47045126	None:intergenic	30.0%
!!	TAGCGATTGATTTTCGATTT+AGG	+	chr5_3:47045108-47045127	None:intergenic	30.0%
	TCTTTCTCTTTCTCTTTCAA+TGG	-	chr5_3:47045146-47045165	Msa0814720:three_prime_UTR	30.0%
!	AAACCCTTCGGATAAATTTT+GGG	-	chr5_3:47045339-47045358	Msa0814720:three_prime_UTR	30.0%
!!	GGATAAATTTTGGGGATTAA+TGG	-	chr5_3:47045348-47045367	Msa0814720:three_prime_UTR	30.0%
!!	ACTTAATTTTGGGGATCTAT+TGG	-	chr5_3:47045412-47045431	Msa0814720:CDS	30.0%
!	GTCTAAAGCAATGTAATTTG+AGG	-	chr5_3:47045760-47045779	Msa0814720:intron	30.0%
!!	TAGATGGTAATGGGATTATT+TGG	-	chr5_3:47045798-47045817	Msa0814720:intron	30.0%
	AGTTTGTATGAAATCAGTTG+GGG	-	chr5_3:47045906-47045925	Msa0814720:CDS	30.0%
	ACTTTACTTCTACAGAATAC+AGG	-	chr5_3:47046588-47046607	Msa0814720:intron	30.0%
	AAAATTCCAAAGCAAAGGAA+AGG	+	chr5_3:47046749-47046768	None:intergenic	30.0%
	TATGGAAAATTCCAAAGCAA+AGG	+	chr5_3:47046754-47046773	None:intergenic	30.0%
!!	TTTATTCTTCTTTGGAGCTT+TGG	-	chr5_3:47046835-47046854	Msa0814720:CDS	30.0%
!!	TTATTCTTCTTTGGAGCTTT+GGG	-	chr5_3:47046836-47046855	Msa0814720:CDS	30.0%
	TTTATTTACACCACAACACT+TGG	-	chr5_3:47047006-47047025	Msa0814720:intron	30.0%
!	ATAATGAATACCAAGTGTTG+TGG	+	chr5_3:47047019-47047038	None:intergenic	30.0%
!!	AGCGATTGATTTTCGATTTA+GGG	+	chr5_3:47045107-47045126	None:intergenic	30.0%
!!	TAGCGATTGATTTTCGATTT+AGG	+	chr5_3:47045108-47045127	None:intergenic	30.0%
	TCTTTCTCTTTCTCTTTCAA+TGG	-	chr5_3:47045146-47045165	Msa0814720:three_prime_UTR	30.0%
!	AAACCCTTCGGATAAATTTT+GGG	-	chr5_3:47045339-47045358	Msa0814720:three_prime_UTR	30.0%
!!	GGATAAATTTTGGGGATTAA+TGG	-	chr5_3:47045348-47045367	Msa0814720:three_prime_UTR	30.0%
!!	ACTTAATTTTGGGGATCTAT+TGG	-	chr5_3:47045412-47045431	Msa0814720:CDS	30.0%
!	GTCTAAAGCAATGTAATTTG+AGG	-	chr5_3:47045760-47045779	Msa0814720:intron	30.0%
!!	TAGATGGTAATGGGATTATT+TGG	-	chr5_3:47045798-47045817	Msa0814720:intron	30.0%
	AGTTTGTATGAAATCAGTTG+GGG	-	chr5_3:47045906-47045925	Msa0814720:CDS	30.0%
	ACTTTACTTCTACAGAATAC+AGG	-	chr5_3:47046588-47046607	Msa0814720:intron	30.0%
	AAAATTCCAAAGCAAAGGAA+AGG	+	chr5_3:47046749-47046768	None:intergenic	30.0%
	TATGGAAAATTCCAAAGCAA+AGG	+	chr5_3:47046754-47046773	None:intergenic	30.0%
!!	TTTATTCTTCTTTGGAGCTT+TGG	-	chr5_3:47046835-47046854	Msa0814720:CDS	30.0%
!!	TTATTCTTCTTTGGAGCTTT+GGG	-	chr5_3:47046836-47046855	Msa0814720:CDS	30.0%
	TTTATTTACACCACAACACT+TGG	-	chr5_3:47047006-47047025	Msa0814720:intron	30.0%
!	ATAATGAATACCAAGTGTTG+TGG	+	chr5_3:47047019-47047038	None:intergenic	30.0%
	ACACTCAATCTGTTCTCAAA+AGG	-	chr5_3:47045250-47045269	Msa0814720:three_prime_UTR	35.0%
!	CAAACCCTTCGGATAAATTT+TGG	-	chr5_3:47045338-47045357	Msa0814720:three_prime_UTR	35.0%
!	AACCCTTCGGATAAATTTTG+GGG	-	chr5_3:47045340-47045359	Msa0814720:three_prime_UTR	35.0%
	ATCCCCAAAATTTATCCGAA+GGG	+	chr5_3:47045345-47045364	None:intergenic	35.0%
	AATCCCCAAAATTTATCCGA+AGG	+	chr5_3:47045346-47045365	None:intergenic	35.0%
!!	TGGCTTTGATGGTAAGAAAT+TGG	-	chr5_3:47045681-47045700	Msa0814720:CDS	35.0%
	CACAATATATTGTCCTCTTC+AGG	+	chr5_3:47045998-47046017	None:intergenic	35.0%
	AAGAGGACAATATATTGTGC+TGG	-	chr5_3:47045999-47046018	Msa0814720:CDS	35.0%
	GACAATATATTGTGCTGGAA+AGG	-	chr5_3:47046004-47046023	Msa0814720:CDS	35.0%
!	TCCCAATGAGTATCCTTTTA+AGG	-	chr5_3:47046090-47046109	Msa0814720:intron	35.0%
	GCCTTAAAAGGATACTCATT+GGG	+	chr5_3:47046094-47046113	None:intergenic	35.0%
	AGCCTTAAAAGGATACTCAT+TGG	+	chr5_3:47046095-47046114	None:intergenic	35.0%
	TTGCCATGCAAATCAACATT+GGG	+	chr5_3:47046151-47046170	None:intergenic	35.0%
	ATTGCCATGCAAATCAACAT+TGG	+	chr5_3:47046152-47046171	None:intergenic	35.0%
	TTTCAAATTTACCTCCTAGC+AGG	+	chr5_3:47046363-47046382	None:intergenic	35.0%
	TTCTACAGAATACAGGAAGA+TGG	-	chr5_3:47046595-47046614	Msa0814720:intron	35.0%
!	TGCTGCTTAAACTTTGATCT+CGG	-	chr5_3:47046640-47046659	Msa0814720:intron	35.0%
	TGATTTCTCTTCTCTATGTC+TGG	-	chr5_3:47046670-47046689	Msa0814720:intron	35.0%
!!	ATCTGCTTTGGAAAAGAGAA+GGG	-	chr5_3:47046698-47046717	Msa0814720:intron	35.0%
	TTTCATCCTTTCCTTTGCTT+TGG	-	chr5_3:47046740-47046759	Msa0814720:intron	35.0%
!!	TATTCTTCTTTGGAGCTTTG+GGG	-	chr5_3:47046837-47046856	Msa0814720:CDS	35.0%
	ACACTCAATCTGTTCTCAAA+AGG	-	chr5_3:47045250-47045269	Msa0814720:three_prime_UTR	35.0%
!	CAAACCCTTCGGATAAATTT+TGG	-	chr5_3:47045338-47045357	Msa0814720:three_prime_UTR	35.0%
!	AACCCTTCGGATAAATTTTG+GGG	-	chr5_3:47045340-47045359	Msa0814720:three_prime_UTR	35.0%
	ATCCCCAAAATTTATCCGAA+GGG	+	chr5_3:47045345-47045364	None:intergenic	35.0%
	AATCCCCAAAATTTATCCGA+AGG	+	chr5_3:47045346-47045365	None:intergenic	35.0%
!!	TGGCTTTGATGGTAAGAAAT+TGG	-	chr5_3:47045681-47045700	Msa0814720:CDS	35.0%
	CACAATATATTGTCCTCTTC+AGG	+	chr5_3:47045998-47046017	None:intergenic	35.0%
	AAGAGGACAATATATTGTGC+TGG	-	chr5_3:47045999-47046018	Msa0814720:CDS	35.0%
	GACAATATATTGTGCTGGAA+AGG	-	chr5_3:47046004-47046023	Msa0814720:CDS	35.0%
!	TCCCAATGAGTATCCTTTTA+AGG	-	chr5_3:47046090-47046109	Msa0814720:intron	35.0%
	GCCTTAAAAGGATACTCATT+GGG	+	chr5_3:47046094-47046113	None:intergenic	35.0%
	AGCCTTAAAAGGATACTCAT+TGG	+	chr5_3:47046095-47046114	None:intergenic	35.0%
	TTGCCATGCAAATCAACATT+GGG	+	chr5_3:47046151-47046170	None:intergenic	35.0%
	ATTGCCATGCAAATCAACAT+TGG	+	chr5_3:47046152-47046171	None:intergenic	35.0%
	TTTCAAATTTACCTCCTAGC+AGG	+	chr5_3:47046363-47046382	None:intergenic	35.0%
	TTCTACAGAATACAGGAAGA+TGG	-	chr5_3:47046595-47046614	Msa0814720:intron	35.0%
!	TGCTGCTTAAACTTTGATCT+CGG	-	chr5_3:47046640-47046659	Msa0814720:intron	35.0%
	TGATTTCTCTTCTCTATGTC+TGG	-	chr5_3:47046670-47046689	Msa0814720:intron	35.0%
!!	ATCTGCTTTGGAAAAGAGAA+GGG	-	chr5_3:47046698-47046717	Msa0814720:intron	35.0%
	TTTCATCCTTTCCTTTGCTT+TGG	-	chr5_3:47046740-47046759	Msa0814720:intron	35.0%
!!	TATTCTTCTTTGGAGCTTTG+GGG	-	chr5_3:47046837-47046856	Msa0814720:CDS	35.0%
!	GATTGAGTGTCAACGGATTT+AGG	+	chr5_3:47045240-47045259	None:intergenic	40.0%
	GAGAACAGATTGAGTGTCAA+CGG	+	chr5_3:47045247-47045266	None:intergenic	40.0%
!!!	GGGGATCTATTGGTTTTTGT+TGG	-	chr5_3:47045422-47045441	Msa0814720:CDS	40.0%
!!	GTCTGAATTGATGGCTTTGA+TGG	-	chr5_3:47045670-47045689	Msa0814720:intron	40.0%
	GTGATTATTTGGCAGATGAG+TGG	-	chr5_3:47045950-47045969	Msa0814720:CDS	40.0%
!!	TGTATCTGCTTTTCCTGAAG+AGG	-	chr5_3:47045982-47046001	Msa0814720:CDS	40.0%
	AGCAAAGACACTGTCTTTGA+AGG	-	chr5_3:47046040-47046059	Msa0814720:CDS	40.0%
!!!	GTATCCTTTTAAGGCTCCAA+AGG	-	chr5_3:47046099-47046118	Msa0814720:intron	40.0%
!!	TTGACCTTTGGAGCCTTAAA+AGG	+	chr5_3:47046106-47046125	None:intergenic	40.0%
!	GTGGTGTCAAATTTGACCTT+TGG	+	chr5_3:47046118-47046137	None:intergenic	40.0%
	TGCCATGCAAATCAACATTG+GGG	+	chr5_3:47046150-47046169	None:intergenic	40.0%
	TTTGCATGGCAATATTTGCC+TGG	-	chr5_3:47046159-47046178	Msa0814720:intron	40.0%
	TATTTGCCTGGACATTCTTC+AGG	-	chr5_3:47046171-47046190	Msa0814720:intron	40.0%
	TCATTACCTGAAGAATGTCC+AGG	+	chr5_3:47046180-47046199	None:intergenic	40.0%
	TTGTCAATTCAAAGCCTGCT+AGG	-	chr5_3:47046346-47046365	Msa0814720:intron	40.0%
	TACAGAATACAGGAAGATGG+TGG	-	chr5_3:47046598-47046617	Msa0814720:intron	40.0%
	GAGATCAAAGTTTAAGCAGC+AGG	+	chr5_3:47046641-47046660	None:intergenic	40.0%
!!	GATCTGCTTTGGAAAAGAGA+AGG	-	chr5_3:47046697-47046716	Msa0814720:intron	40.0%
!!	ATTCTTCTTTGGAGCTTTGG+GGG	-	chr5_3:47046838-47046857	Msa0814720:CDS	40.0%
!	GATTGAGTGTCAACGGATTT+AGG	+	chr5_3:47045240-47045259	None:intergenic	40.0%
	GAGAACAGATTGAGTGTCAA+CGG	+	chr5_3:47045247-47045266	None:intergenic	40.0%
!!!	GGGGATCTATTGGTTTTTGT+TGG	-	chr5_3:47045422-47045441	Msa0814720:CDS	40.0%
!!	GTCTGAATTGATGGCTTTGA+TGG	-	chr5_3:47045670-47045689	Msa0814720:intron	40.0%
	GTGATTATTTGGCAGATGAG+TGG	-	chr5_3:47045950-47045969	Msa0814720:CDS	40.0%
!!	TGTATCTGCTTTTCCTGAAG+AGG	-	chr5_3:47045982-47046001	Msa0814720:CDS	40.0%
	AGCAAAGACACTGTCTTTGA+AGG	-	chr5_3:47046040-47046059	Msa0814720:CDS	40.0%
!!!	GTATCCTTTTAAGGCTCCAA+AGG	-	chr5_3:47046099-47046118	Msa0814720:intron	40.0%
!!	TTGACCTTTGGAGCCTTAAA+AGG	+	chr5_3:47046106-47046125	None:intergenic	40.0%
!	GTGGTGTCAAATTTGACCTT+TGG	+	chr5_3:47046118-47046137	None:intergenic	40.0%
	TGCCATGCAAATCAACATTG+GGG	+	chr5_3:47046150-47046169	None:intergenic	40.0%
	TTTGCATGGCAATATTTGCC+TGG	-	chr5_3:47046159-47046178	Msa0814720:intron	40.0%
	TATTTGCCTGGACATTCTTC+AGG	-	chr5_3:47046171-47046190	Msa0814720:intron	40.0%
	TCATTACCTGAAGAATGTCC+AGG	+	chr5_3:47046180-47046199	None:intergenic	40.0%
	TTGTCAATTCAAAGCCTGCT+AGG	-	chr5_3:47046346-47046365	Msa0814720:intron	40.0%
	TACAGAATACAGGAAGATGG+TGG	-	chr5_3:47046598-47046617	Msa0814720:intron	40.0%
	GAGATCAAAGTTTAAGCAGC+AGG	+	chr5_3:47046641-47046660	None:intergenic	40.0%
!!	GATCTGCTTTGGAAAAGAGA+AGG	-	chr5_3:47046697-47046716	Msa0814720:intron	40.0%
!!	ATTCTTCTTTGGAGCTTTGG+GGG	-	chr5_3:47046838-47046857	Msa0814720:CDS	40.0%
!!	AGGGCTAGCGTTTTTGTTGA+AGG	+	chr5_3:47045088-47045107	None:intergenic	45.0%
!	TGAGTGTCAACGGATTTAGG+CGG	+	chr5_3:47045237-47045256	None:intergenic	45.0%
!!	GTGGGTTGTTGCAATTTTGC+AGG	-	chr5_3:47045642-47045661	Msa0814720:intron	45.0%
	CAGGTTGCAGTCTGAATTGA+TGG	-	chr5_3:47045661-47045680	Msa0814720:intron	45.0%
	TGCTGGAAAGGAACAATAGC+AGG	-	chr5_3:47046016-47046035	Msa0814720:CDS	45.0%
	CATGCAAATCAACATTGGGG+TGG	+	chr5_3:47046147-47046166	None:intergenic	45.0%
!!	CACCCCAATGTTGATTTGCA+TGG	-	chr5_3:47046145-47046164	Msa0814720:intron	45.0%
	GTGTCAGTAGCATGTGATGA+TGG	-	chr5_3:47046205-47046224	Msa0814720:intron	45.0%
	TCAATTCAAAGCCTGCTAGG+AGG	-	chr5_3:47046349-47046368	Msa0814720:intron	45.0%
	TTTAGCGGCGAGCTAATGTT+TGG	+	chr5_3:47046465-47046484	None:intergenic	45.0%
!!	CAGCTTTGGAGCAATCAAGA+AGG	-	chr5_3:47046498-47046517	Msa0814720:intron	45.0%
	TGTCTGGTTGTGATCTGCTT+TGG	-	chr5_3:47046686-47046705	Msa0814720:intron	45.0%
!!	AGGGCTAGCGTTTTTGTTGA+AGG	+	chr5_3:47045088-47045107	None:intergenic	45.0%
!	TGAGTGTCAACGGATTTAGG+CGG	+	chr5_3:47045237-47045256	None:intergenic	45.0%
!!	GTGGGTTGTTGCAATTTTGC+AGG	-	chr5_3:47045642-47045661	Msa0814720:intron	45.0%
	CAGGTTGCAGTCTGAATTGA+TGG	-	chr5_3:47045661-47045680	Msa0814720:intron	45.0%
	TGCTGGAAAGGAACAATAGC+AGG	-	chr5_3:47046016-47046035	Msa0814720:CDS	45.0%
	CATGCAAATCAACATTGGGG+TGG	+	chr5_3:47046147-47046166	None:intergenic	45.0%
!!	CACCCCAATGTTGATTTGCA+TGG	-	chr5_3:47046145-47046164	Msa0814720:intron	45.0%
	GTGTCAGTAGCATGTGATGA+TGG	-	chr5_3:47046205-47046224	Msa0814720:intron	45.0%
	TCAATTCAAAGCCTGCTAGG+AGG	-	chr5_3:47046349-47046368	Msa0814720:intron	45.0%
	TTTAGCGGCGAGCTAATGTT+TGG	+	chr5_3:47046465-47046484	None:intergenic	45.0%
!!	CAGCTTTGGAGCAATCAAGA+AGG	-	chr5_3:47046498-47046517	Msa0814720:intron	45.0%
	TGTCTGGTTGTGATCTGCTT+TGG	-	chr5_3:47046686-47046705	Msa0814720:intron	45.0%
!!!	TTTTTTAATTTACTTAATTT+TGG	-	chr5_3:47045401-47045420	Msa0814720:exon	5.0%
!!!	TTTTTAATTTACTTAATTTT+GGG	-	chr5_3:47045402-47045421	Msa0814720:CDS	5.0%
!!!	TTTTTAATTTACTTAATTTT+GGG	-	chr5_3:47045402-47045421	Msa0814720:CDS	5.0%
!!!	AATTTTTTTTTTTTTTTTTG+TGG	-	chr5_3:47045623-47045642	Msa0814720:intron	5.0%
!!!	ATTTTTTTTTTTTTTTTTGT+GGG	-	chr5_3:47045624-47045643	Msa0814720:intron	5.0%
!!!	TTTTTTAATTTACTTAATTT+TGG	-	chr5_3:47045401-47045420	Msa0814720:exon	5.0%
!!!	TTTTTAATTTACTTAATTTT+GGG	-	chr5_3:47045402-47045421	Msa0814720:CDS	5.0%
!!!	TTTTTAATTTACTTAATTTT+GGG	-	chr5_3:47045402-47045421	Msa0814720:CDS	5.0%
!!!	AATTTTTTTTTTTTTTTTTG+TGG	-	chr5_3:47045623-47045642	Msa0814720:intron	5.0%
!!!	ATTTTTTTTTTTTTTTTTGT+GGG	-	chr5_3:47045624-47045643	Msa0814720:intron	5.0%
!	TGTCAACGGATTTAGGCGGA+GGG	+	chr5_3:47045233-47045252	None:intergenic	50.0%
	TGGCAGATGAGTGGAGATTC+TGG	-	chr5_3:47045959-47045978	Msa0814720:CDS	50.0%
!	AACATTGGGGTGGAAGCATG+TGG	+	chr5_3:47046137-47046156	None:intergenic	50.0%
	TGTGCTGCCTGTGGATTTAG+CGG	+	chr5_3:47046480-47046499	None:intergenic	50.0%
!	TGTCAACGGATTTAGGCGGA+GGG	+	chr5_3:47045233-47045252	None:intergenic	50.0%
	TGGCAGATGAGTGGAGATTC+TGG	-	chr5_3:47045959-47045978	Msa0814720:CDS	50.0%
!	AACATTGGGGTGGAAGCATG+TGG	+	chr5_3:47046137-47046156	None:intergenic	50.0%
	TGTGCTGCCTGTGGATTTAG+CGG	+	chr5_3:47046480-47046499	None:intergenic	50.0%
	GGAGGGAGAGGTTGCATTGA+AGG	+	chr5_3:47045216-47045235	None:intergenic	55.0%
!	GTGTCAACGGATTTAGGCGG+AGG	+	chr5_3:47045234-47045253	None:intergenic	55.0%
	TAGCTCGCCGCTAAATCCAC+AGG	-	chr5_3:47046470-47046489	Msa0814720:intron	55.0%
	ATCCACAGGCAGCACAGCTT+TGG	-	chr5_3:47046484-47046503	Msa0814720:intron	55.0%
	GGAGGGAGAGGTTGCATTGA+AGG	+	chr5_3:47045216-47045235	None:intergenic	55.0%
!	GTGTCAACGGATTTAGGCGG+AGG	+	chr5_3:47045234-47045253	None:intergenic	55.0%
	TAGCTCGCCGCTAAATCCAC+AGG	-	chr5_3:47046470-47046489	Msa0814720:intron	55.0%
	ATCCACAGGCAGCACAGCTT+TGG	-	chr5_3:47046484-47046503	Msa0814720:intron	55.0%
	ACGGATTTAGGCGGAGGGAG+AGG	+	chr5_3:47045228-47045247	None:intergenic	60.0%
	CTCCAAAGCTGTGCTGCCTG+TGG	+	chr5_3:47046489-47046508	None:intergenic	60.0%
	ACGGATTTAGGCGGAGGGAG+AGG	+	chr5_3:47045228-47045247	None:intergenic	60.0%
	CTCCAAAGCTGTGCTGCCTG+TGG	+	chr5_3:47046489-47046508	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	47045012	47047039	47045012	ID=Msa0814720;Name=Msa0814720
chr5_3	mRNA	47045012	47047039	47045012	ID=Msa0814720-mRNA-1;Parent=Msa0814720;Name=Msa0814720-mRNA-1;_AED=0.12;_eAED=0.12;_QI=130\|1\|1\|1\|0.83\|0.71\|7\|390\|177
chr5_3	exon	47045012	47045448	47045012	ID=Msa0814720-mRNA-1:exon:14280;Parent=Msa0814720-mRNA-1
chr5_3	exon	47045532	47045591	47045532	ID=Msa0814720-mRNA-1:exon:14279;Parent=Msa0814720-mRNA-1
chr5_3	exon	47045681	47045744	47045681	ID=Msa0814720-mRNA-1:exon:14278;Parent=Msa0814720-mRNA-1
chr5_3	exon	47045859	47046086	47045859	ID=Msa0814720-mRNA-1:exon:14277;Parent=Msa0814720-mRNA-1
chr5_3	exon	47046360	47046387	47046360	ID=Msa0814720-mRNA-1:exon:14276;Parent=Msa0814720-mRNA-1
chr5_3	exon	47046780	47046995	47046780	ID=Msa0814720-mRNA-1:exon:14275;Parent=Msa0814720-mRNA-1
chr5_3	exon	47047019	47047039	47047019	ID=Msa0814720-mRNA-1:exon:14274;Parent=Msa0814720-mRNA-1
chr5_3	five_prime_UTR	47047019	47047039	47047019	ID=Msa0814720-mRNA-1:five_prime_utr;Parent=Msa0814720-mRNA-1
chr5_3	five_prime_UTR	47046887	47046995	47046887	ID=Msa0814720-mRNA-1:five_prime_utr;Parent=Msa0814720-mRNA-1
chr5_3	CDS	47046780	47046886	47046780	ID=Msa0814720-mRNA-1:cds;Parent=Msa0814720-mRNA-1
chr5_3	CDS	47046360	47046387	47046360	ID=Msa0814720-mRNA-1:cds;Parent=Msa0814720-mRNA-1
chr5_3	CDS	47045859	47046086	47045859	ID=Msa0814720-mRNA-1:cds;Parent=Msa0814720-mRNA-1
chr5_3	CDS	47045681	47045744	47045681	ID=Msa0814720-mRNA-1:cds;Parent=Msa0814720-mRNA-1
chr5_3	CDS	47045532	47045591	47045532	ID=Msa0814720-mRNA-1:cds;Parent=Msa0814720-mRNA-1
chr5_3	CDS	47045402	47045448	47045402	ID=Msa0814720-mRNA-1:cds;Parent=Msa0814720-mRNA-1
chr5_3	three_prime_UTR	47045012	47045401	47045012	ID=Msa0814720-mRNA-1:three_prime_utr;Parent=Msa0814720-mRNA-1

Gene Sequence

>Msa0814720

ATGGCTAGCGCTAACGTTCAAACTGAAGCTTCTCAAAGCAACATTGCTCCTTCAATGCAACCTCTCCCTCCGCCTAAATCCGTTGACACTCAATCTGTTCTCAAAAGGTTGCAGTCTGAATTGATGGCTTTGATGATGAGTGGAGATTCTGGTGTATCTGCTTTTCCTGAAGAGGACAATATATTGTGCTGGAAAGGAACAATAGCAGGAAGCAAAGACACTGTCTTTGAAGGAACAGAATACAAATTGTCACTTTCATTTCCCAATGAGTATCCTTTTAAGGCTCCAAAGGTCAAATTTGACACCACATGCTTCCACCCCAATGTTGATTTGCATGGCAATATTTGCCTGGACATTCTTCAGGATAAATGGTCATCTGCTTATGATGTTAGAACAATTCTTTTGTCAATTCAAAGCCTGCTAGGAGAGCCAAACATTAGCTCGCCGCTAAATCCACAGGCAGCACAGCTTTGGAGCAATCAAGAAGAATACAGGAAGATGGTGGAGAAGTTGTACAAAGATCCTGCTGCTTAA

Protein sequence

>Msa0814720

MASANVQTEASQSNIAPSMQPLPPPKSVDTQSVLKRLQSELMALMMSGDSGVSAFPEEDNILCWKGTIAGSKDTVFEGTEYKLSLSFPNEYPFKAPKVKFDTTCFHPNVDLHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNPQAAQLWSNQEEYRKMVEKLYKDPAA*