AlfalfaGEDB | Msa0749980

M. sativa cultivar zhongmu-4 / Msa0749980

KEGG: K06688
GO: GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007088 GO:0007346 GO:0008150 GO:0008152 GO:0008283 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0010564 GO:0010965 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030071 GO:0030163 GO:0031145 GO:0031625 GO:0032446 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0036211 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051603 GO:0051726 GO:0051783 GO:0051983 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901990 GO:1902099 GO:1905818
PFAM: PF00179.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749980	XP_003610967.1	98.305	177	3	0	1	177	1	177	2.02e-127	365

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749980	sp\|Q9LJZ5\|UBC19_ARATH	85.256	156	23	0	18	173	22	177	1.43e-98	285

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749980	G7K9A0	98.305	177	3	0	1	177	1	177	9.63e-128	365

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0712040	Msa0749980	0.862079	6.533125e-64	-8.615850e-47
Msa0749980	Msa0814720	0.889396	2.514564e-73	-8.615850e-47
Msa0749980	Msa0846900	0.810892	9.193526e-51	-8.615850e-47
Msa0749980	Msa1078990	0.808096	3.663038e-50	-8.615850e-47
Msa0186180	Msa0749980	0.810628	1.048928e-50	-8.615850e-47
Msa0349550	Msa0749980	0.838641	2.549301e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749980	MtrunA17_Chr5g0396451	98.305	177	3	0	1	177	1	177	1.85e-131	365
Msa0749980	MtrunA17_Chr4g0038891	85.876	177	25	0	1	177	1	177	5.36e-115	323
Msa0749980	MtrunA17_Chr1g0199951	64.286	168	59	1	6	172	15	182	4.38e-74	221
Msa0749980	MtrunA17_Chr4g0060351	45.652	138	74	1	35	171	7	144	6.73e-39	130
Msa0749980	MtrunA17_Chr8g0362321	44.928	138	75	1	35	171	7	144	8.64e-39	129
Msa0749980	MtrunA17_Chr2g0316201	46.094	128	69	0	35	162	8	135	9.00e-36	122
Msa0749980	MtrunA17_Chr2g0316211	45.669	127	69	0	36	162	9	135	5.00e-35	120
Msa0749980	MtrunA17_Chr8g0369311	41.606	137	79	1	29	164	54	190	1.46e-32	115
Msa0749980	MtrunA17_Chr4g0037011	43.089	123	70	0	35	157	4	126	2.96e-32	113
Msa0749980	MtrunA17_Chr3g0108261	41.406	128	75	0	35	162	4	131	4.33e-32	112
Msa0749980	MtrunA17_Chr5g0432831	41.406	128	75	0	35	162	4	131	4.33e-32	112
Msa0749980	MtrunA17_Chr7g0275361	40.458	131	77	1	35	164	4	134	9.75e-32	111
Msa0749980	MtrunA17_Chr1g0154011	41.406	128	75	0	35	162	4	131	2.10e-31	110
Msa0749980	MtrunA17_Chr4g0031181	35.252	139	76	2	49	173	22	160	4.83e-26	97.8
Msa0749980	MtrunA17_Chr8g0378601	37.097	124	78	0	35	158	25	148	2.20e-24	93.6
Msa0749980	MtrunA17_Chr3g0131871	38.211	123	74	2	36	156	6	128	7.78e-24	92.8
Msa0749980	MtrunA17_Chr2g0328001	35.115	131	71	2	57	173	30	160	5.21e-23	89.7
Msa0749980	MtrunA17_Chr3g0139901	36.607	112	70	1	47	157	20	131	2.29e-22	87.8
Msa0749980	MtrunA17_Chr5g0401831	34.932	146	87	3	36	173	8	153	2.42e-21	85.5
Msa0749980	MtrunA17_Chr4g0053191	35.915	142	83	3	36	169	8	149	3.67e-21	84.7
Msa0749980	MtrunA17_Chr4g0059291	36.000	125	75	4	35	157	6	127	2.67e-20	83.2
Msa0749980	MtrunA17_Chr8g0348701	34.400	125	77	4	35	157	6	127	4.06e-18	77.4
Msa0749980	MtrunA17_Chr5g0403591	31.746	126	85	1	36	161	33	157	6.68e-18	77.0
Msa0749980	MtrunA17_Chr8g0387131	34.400	125	77	4	35	157	6	127	2.34e-17	75.5
Msa0749980	MtrunA17_Chr7g0254701	30.496	141	97	1	32	171	10	150	2.54e-16	74.3
Msa0749980	MtrunA17_Chr8g0372391	36.364	99	61	2	36	133	19	116	1.51e-15	70.1
Msa0749980	MtrunA17_Chr5g0404931	36.364	99	61	2	36	133	19	116	4.13e-14	66.6
Msa0749980	MtrunA17_Chr8g0345331	32.759	116	69	3	31	141	4	115	4.14e-11	59.7
Msa0749980	MtrunA17_Chr4g0068301	29.688	128	74	4	33	155	11	127	8.03e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749980	AT3G20060.1	85.256	156	23	0	18	173	22	177	1.46e-99	285
Msa0749980	AT1G50490.1	85.000	160	24	0	18	177	21	180	9.45e-94	270
Msa0749980	AT3G20060.2	87.879	132	16	0	42	173	1	132	2.88e-87	252
Msa0749980	AT1G14400.1	44.928	138	75	1	35	171	7	144	4.90e-38	128
Msa0749980	AT1G14400.2	44.928	138	75	1	35	171	7	144	4.90e-38	128
Msa0749980	AT2G02760.1	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0749980	AT2G02760.2	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0749980	AT2G02760.4	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0749980	AT2G02760.3	44.928	138	75	1	35	171	7	144	5.52e-38	128
Msa0749980	AT5G62540.1	45.775	142	75	2	30	169	2	143	6.20e-37	125
Msa0749980	AT1G78870.2	46.094	128	69	0	35	162	8	135	1.27e-35	122
Msa0749980	AT1G16890.2	45.312	128	70	0	35	162	8	135	5.55e-35	120
Msa0749980	AT1G16890.3	46.923	130	67	1	35	162	15	144	4.07e-34	118
Msa0749980	AT5G56150.1	42.188	128	74	0	35	162	4	131	2.16e-32	113
Msa0749980	AT2G16740.1	39.706	136	81	1	35	169	4	139	3.67e-32	113
Msa0749980	AT1G64230.2	41.406	128	75	0	35	162	4	131	7.41e-32	112
Msa0749980	AT1G64230.1	41.406	128	75	0	35	162	4	131	7.41e-32	112
Msa0749980	AT4G27960.1	40.625	128	76	0	35	162	4	131	1.19e-31	112
Msa0749980	AT3G08700.2	40.580	138	80	2	35	170	4	141	1.54e-31	111
Msa0749980	AT3G08700.1	40.580	138	80	2	35	170	4	141	1.54e-31	111
Msa0749980	AT3G08690.2	41.935	124	72	0	35	158	4	127	3.76e-31	110
Msa0749980	AT3G08690.1	41.935	124	72	0	35	158	4	127	3.76e-31	110
Msa0749980	AT5G41700.5	39.844	128	77	0	35	162	4	131	5.56e-31	110
Msa0749980	AT5G41700.2	39.844	128	77	0	35	162	4	131	5.56e-31	110
Msa0749980	AT5G41700.1	39.844	128	77	0	35	162	4	131	5.56e-31	110
Msa0749980	AT5G53300.2	39.844	128	77	0	35	162	4	131	6.06e-31	110
Msa0749980	AT5G53300.4	39.844	128	77	0	35	162	4	131	6.06e-31	110
Msa0749980	AT5G53300.1	39.844	128	77	0	35	162	4	131	6.06e-31	110
Msa0749980	AT4G27960.2	40.625	128	76	0	35	162	34	161	1.63e-30	109
Msa0749980	AT1G16890.1	51.579	95	46	0	68	162	8	102	1.23e-29	105
Msa0749980	AT1G78870.4	51.579	95	46	0	68	162	8	102	1.48e-29	105
Msa0749980	AT5G41700.4	39.535	129	77	1	35	162	4	132	6.66e-29	104
Msa0749980	AT1G64230.3	38.686	137	75	1	35	162	4	140	1.24e-28	104
Msa0749980	AT1G78870.3	45.714	105	57	0	35	139	8	112	3.31e-28	102
Msa0749980	AT1G64230.5	42.727	110	62	1	56	164	67	176	4.22e-28	103
Msa0749980	AT1G64230.4	42.727	110	62	1	56	164	67	176	4.22e-28	103
Msa0749980	AT1G78870.1	51.042	96	46	1	68	162	8	103	6.37e-28	101
Msa0749980	AT3G13550.1	37.500	136	85	0	35	170	39	174	3.56e-26	99.0
Msa0749980	AT1G36340.2	40.876	137	79	2	26	162	3	137	1.83e-25	96.3
Msa0749980	AT1G36340.1	40.876	137	79	2	26	162	3	137	1.83e-25	96.3
Msa0749980	AT5G50870.1	40.000	135	73	4	34	166	4	132	1.89e-25	97.1
Msa0749980	AT5G50870.2	41.129	124	68	3	34	155	4	124	2.70e-25	97.1
Msa0749980	AT5G56150.2	41.000	100	59	0	35	134	4	103	7.43e-24	90.9
Msa0749980	AT3G55380.1	33.813	139	78	2	49	173	23	161	4.13e-23	90.5
Msa0749980	AT3G13550.2	39.091	110	67	0	35	144	39	148	6.83e-23	90.1
Msa0749980	AT5G59300.1	34.351	131	72	2	57	173	30	160	1.03e-22	89.4
Msa0749980	AT5G41700.3	38.462	104	64	0	35	138	4	107	1.36e-22	88.6
Msa0749980	AT3G46460.1	33.813	139	78	2	49	173	22	160	1.75e-22	89.0
Msa0749980	AT5G25760.1	36.290	124	73	2	35	157	13	131	2.58e-22	88.2
Msa0749980	AT5G25760.2	36.290	124	73	2	35	157	13	131	2.58e-22	88.2
Msa0749980	AT5G53300.3	38.384	99	61	0	35	133	4	102	5.37e-22	85.9
Msa0749980	AT1G63800.1	38.400	125	72	4	35	157	6	127	9.53e-22	87.4
Msa0749980	AT5G41340.1	37.600	125	73	4	35	157	6	127	6.61e-21	85.1
Msa0749980	AT3G57870.1	35.915	142	83	3	36	169	9	150	3.99e-20	82.4
Msa0749980	AT2G18600.1	33.333	153	92	5	7	157	11	155	1.75e-19	81.6
Msa0749980	AT2G18600.2	33.333	153	92	5	7	157	11	155	1.75e-19	81.6
Msa0749980	AT1G63800.2	40.217	92	53	2	68	157	21	112	2.11e-19	80.9
Msa0749980	AT2G46030.5	36.000	125	75	4	35	157	6	127	6.23e-19	80.1
Msa0749980	AT2G46030.1	36.000	125	75	4	35	157	6	127	6.23e-19	80.1
Msa0749980	AT2G46030.3	36.000	125	75	4	35	157	78	199	4.41e-18	79.3
Msa0749980	AT4G36800.2	31.061	132	89	2	27	157	24	154	2.30e-17	75.9
Msa0749980	AT4G36800.1	31.061	132	89	2	27	157	24	154	2.30e-17	75.9
Msa0749980	AT5G05080.2	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0749980	AT5G05080.3	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0749980	AT5G05080.1	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0749980	AT5G05080.4	31.410	156	98	3	18	172	3	150	8.05e-17	75.9
Msa0749980	AT5G41340.2	40.000	85	49	2	75	157	8	92	2.89e-16	72.4
Msa0749980	AT3G24515.1	32.484	157	86	5	36	173	10	165	3.97e-16	75.5
Msa0749980	AT2G46030.4	35.644	101	63	2	59	157	30	130	4.79e-16	72.4
Msa0749980	AT2G46030.2	35.644	101	63	2	59	157	30	130	4.79e-16	72.4
Msa0749980	AT3G46460.3	33.333	111	60	2	77	173	8	118	6.79e-16	70.5
Msa0749980	AT3G46460.2	33.333	111	60	2	77	173	8	118	6.79e-16	70.5
Msa0749980	AT3G55380.2	26.590	173	79	3	49	173	23	195	8.45e-16	72.0
Msa0749980	AT3G24515.3	35.652	115	65	3	68	173	76	190	9.41e-16	74.3
Msa0749980	AT1G75440.1	33.333	111	72	2	24	133	7	116	2.95e-14	67.4
Msa0749980	AT1G45050.1	32.432	111	73	2	24	133	7	116	4.17e-14	67.0
Msa0749980	AT4G36410.1	34.286	105	67	2	30	133	13	116	9.83e-14	65.9
Msa0749980	AT5G42990.1	32.432	111	73	2	24	133	7	116	1.82e-13	65.1
Msa0749980	AT2G32790.1	35.246	122	76	1	53	174	51	169	1.32e-12	63.2

Find 66 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACGAAACGACGTCGAATTTA+AGG	0.146354	5_2:-3443110	None:intergenic
TTATTCTTCTTTGGAGCTTT+GGG	0.197325	5_2:+3444937	Msa0749980:three_prime_UTR
GGCTAGTAATCTTGGATAAA+TGG	0.214253	5_2:-3443041	None:intergenic
CTAGCCGTTGTGATTAATTT+AGG	0.214997	5_2:+3443058	Msa0749980:five_prime_UTR
TTTATTCTTCTTTGGAGCTT+TGG	0.226931	5_2:+3444936	Msa0749980:three_prime_UTR
TTGACCTTTGGAGCCTTAAA+AGG	0.231384	5_2:-3444204	None:intergenic
GATTGAGTGTCAACGGATTT+AGG	0.260118	5_2:-3443359	None:intergenic
TCTTTCTCTTTCTCTTTCAA+TGG	0.299312	5_2:+3443268	Msa0749980:exon
TGATTTCTCTTCTCTATGTC+TGG	0.334622	5_2:+3444771	Msa0749980:three_prime_UTR
CACAATATATTGTCCTCTTC+AGG	0.336865	5_2:-3444096	None:intergenic
CAGGTTGCAGTCTGAATTGA+TGG	0.339528	5_2:+3443763	Msa0749980:intron
TATTTGCTTGGACATTCTTC+AGG	0.340447	5_2:+3444272	Msa0749980:CDS
TGGCAGATGAGTGGAGATTC+TGG	0.360212	5_2:+3444060	Msa0749980:intron
TGTCTGGTTGTGATCTGCTT+TGG	0.374694	5_2:+3444787	Msa0749980:three_prime_UTR
AAAGTGAAAAGTAAAATAAA+AGG	0.386904	5_2:-3445077	None:intergenic
ATCACAACGGCTAGTAATCT+TGG	0.394022	5_2:-3443049	None:intergenic
GTGGTGTCAAATTTGACCTT+TGG	0.405768	5_2:-3444216	None:intergenic
TTGCCATGCAAATCAACATT+GGG	0.409629	5_2:-3444249	None:intergenic
ATCCACAGGCAGCACAGCTT+TGG	0.411990	5_2:+3444585	Msa0749980:CDS
GTCTGAATTGATGGCTTTGA+TGG	0.419788	5_2:+3443772	Msa0749980:CDS
AATGGAAATAAATCACAGTT+TGG	0.423708	5_2:-3443023	None:intergenic
TTTAGCGGCGAGCTAATGTT+TGG	0.426525	5_2:-3444563	None:intergenic
CACCCCAATGTTGATTTGCA+TGG	0.432591	5_2:+3444246	Msa0749980:CDS
GGAGGGAGAGGTTGCATTGA+AGG	0.440179	5_2:-3443335	None:intergenic
ACACTCAATCTGTTCTCAAA+AGG	0.451346	5_2:+3443372	Msa0749980:CDS
AAGAGAGAAACAATCATGTA+TGG	0.452980	5_2:-3444870	None:intergenic
AGCCTTAAAAGGATACTCAT+TGG	0.457477	5_2:-3444193	None:intergenic
ACTTTACTTCTACAGAATAC+AGG	0.462310	5_2:+3444689	Msa0749980:intron
GCCTTAAAAGGATACTCATT+GGG	0.466815	5_2:-3444192	None:intergenic
ATTCGACGTCGTTTCGTGAA+AGG	0.468821	5_2:+3443116	Msa0749980:five_prime_UTR
AGCAAAGACACTGTCTTTGA+AGG	0.498680	5_2:+3444141	Msa0749980:CDS
TTTCAAATTTACCTCCTAGC+AGG	0.498899	5_2:-3444461	None:intergenic
TGCTGCTTAAACTTTGATCT+CGG	0.504605	5_2:+3444741	Msa0749980:exon
TATTCTTCTTTGGAGCTTTG+GGG	0.507539	5_2:+3444938	Msa0749980:three_prime_UTR
TGCTGGAAAGGAACAATAGC+AGG	0.507664	5_2:+3444117	Msa0749980:CDS
GTGTCAACGGATTTAGGCGG+AGG	0.521333	5_2:-3443353	None:intergenic
TTTATTTACACCACAACACT+TGG	0.523262	5_2:+3445107	Msa0749980:three_prime_UTR
GACAATATATTGTGCTGGAA+AGG	0.525589	5_2:+3444105	Msa0749980:CDS
CTCCAAAGCTGTGCTGCCTG+TGG	0.525701	5_2:-3444587	None:intergenic
TTTGCATGGCAATATTTGCT+TGG	0.528158	5_2:+3444260	Msa0749980:CDS
AAGAGGACAATATATTGTGC+TGG	0.531992	5_2:+3444100	Msa0749980:CDS
ACGGATTTAGGCGGAGGGAG+AGG	0.544685	5_2:-3443347	None:intergenic
GAGAACAGATTGAGTGTCAA+CGG	0.546293	5_2:-3443366	None:intergenic
TATGGAAAATTTCAAAGCAA+AGG	0.548100	5_2:-3444852	None:intergenic
TTGTCAATTCAAAGCCTGCT+AGG	0.548402	5_2:+3444447	Msa0749980:CDS
GAGATCAAAGTTTAAGCAGC+AGG	0.549093	5_2:-3444739	None:intergenic
ATTCTTCTTTGGAGCTTTGG+GGG	0.562565	5_2:+3444939	Msa0749980:three_prime_UTR
TGTGCTGCCTGTGGATTTAG+CGG	0.580376	5_2:-3444578	None:intergenic
ATTGCCATGCAAATCAACAT+TGG	0.581157	5_2:-3444250	None:intergenic
GATCTGCTTTGGAAAAGAGA+AGG	0.581476	5_2:+3444798	Msa0749980:three_prime_UTR
AAAATTTCAAAGCAAAGGAA+AGG	0.586656	5_2:-3444847	None:intergenic
TTCTACAGAATACAGGAAGA+TGG	0.589700	5_2:+3444696	Msa0749980:intron
GTGATTATTTGGCAGATGAG+TGG	0.606809	5_2:+3444051	Msa0749980:intron
TAGCTCGCCGCTAAATCCAC+AGG	0.611347	5_2:+3444571	Msa0749980:CDS
CAGCTTTGGAGCAATCAAGA+AGG	0.619795	5_2:+3444599	Msa0749980:CDS
ATCTGCTTTGGAAAAGAGAA+GGG	0.635430	5_2:+3444799	Msa0749980:three_prime_UTR
TACAGAATACAGGAAGATGG+TGG	0.637677	5_2:+3444699	Msa0749980:intron
TCAATTCAAAGCCTGCTAGG+AGG	0.657162	5_2:+3444450	Msa0749980:CDS
TGTCAACGGATTTAGGCGGA+GGG	0.657757	5_2:-3443352	None:intergenic
GAAGCCTAAATTAATCACAA+CGG	0.665447	5_2:-3443062	None:intergenic
AACGACGTCGAATTTAAGGT+CGG	0.671314	5_2:-3443106	None:intergenic
ATAATGAATACCAAGTGTTG+TGG	0.673322	5_2:-3445117	None:intergenic
CATGCAAATCAACATTGGGG+TGG	0.679728	5_2:-3444245	None:intergenic
TGAGTGTCAACGGATTTAGG+CGG	0.688984	5_2:-3443356	None:intergenic
TGCCATGCAAATCAACATTG+GGG	0.689638	5_2:-3444248	None:intergenic
AACATTGGGGTGGAAGCATG+TGG	0.689650	5_2:-3444235	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAATTTACTTAATTTTG+GGG	+	chr5_2:3443527-3443546	Msa0749980:intron	10.0%
!!!	TTTTGAATTTATTTGATTTT+GGG	+	chr5_2:3443598-3443617	Msa0749980:intron	10.0%
!!!	GTTTAGTTAATTTAAAATAT+TGG	+	chr5_2:3443664-3443683	Msa0749980:intron	10.0%
!!!	TTTTAATTTACTTAATTTTG+GGG	+	chr5_2:3443527-3443546	Msa0749980:intron	10.0%
!!!	TTTTGAATTTATTTGATTTT+GGG	+	chr5_2:3443598-3443617	Msa0749980:intron	10.0%
!!!	GTTTAGTTAATTTAAAATAT+TGG	+	chr5_2:3443664-3443683	Msa0749980:intron	10.0%
!!	TCTTGATTGAATTAAAATTT+AGG	+	chr5_2:3443498-3443517	Msa0749980:intron	15.0%
!!!	CTTTTGAATTTATTTGATTT+TGG	+	chr5_2:3443597-3443616	Msa0749980:intron	15.0%
!!!	TTGTTGATTAAACTAAATTT+AGG	+	chr5_2:3443634-3443653	Msa0749980:intron	15.0%
!!!	TGTTGATTAAACTAAATTTA+GGG	+	chr5_2:3443635-3443654	Msa0749980:intron	15.0%
!!!	AGTTAATTTAAAATATTGGT+AGG	+	chr5_2:3443668-3443687	Msa0749980:intron	15.0%
!!!	GTTAATTTAAAATATTGGTA+GGG	+	chr5_2:3443669-3443688	Msa0749980:intron	15.0%
!!	AATTCATTAATGTGATTATT+TGG	+	chr5_2:3443933-3443952	Msa0749980:intron	15.0%
!!	ATTCATTAATGTGATTATTT+GGG	+	chr5_2:3443934-3443953	Msa0749980:intron	15.0%
!!	AATTCATTAATGTGATTATT+TGG	+	chr5_2:3443933-3443952	Msa0749980:intron	15.0%
!!!	AATTGATTAATCTGTTTTAT+AGG	+	chr5_2:3444386-3444405	Msa0749980:intron	15.0%
!!	AAAAATACAATTAACAAACA+GGG	-	chr5_2:3444523-3444542	None:intergenic	15.0%
!!	TAAAAATACAATTAACAAAC+AGG	-	chr5_2:3444524-3444543	None:intergenic	15.0%
!!!	TAGATTATTTTATTCTTCTT+TGG	+	chr5_2:3444928-3444947	Msa0749980:three_prime_UTR	15.0%
!!	AAAGTGAAAAGTAAAATAAA+AGG	-	chr5_2:3445080-3445099	None:intergenic	15.0%
!!	TCTTGATTGAATTAAAATTT+AGG	+	chr5_2:3443498-3443517	Msa0749980:intron	15.0%
!!!	CTTTTGAATTTATTTGATTT+TGG	+	chr5_2:3443597-3443616	Msa0749980:intron	15.0%
!!!	TTGTTGATTAAACTAAATTT+AGG	+	chr5_2:3443634-3443653	Msa0749980:intron	15.0%
!!!	TGTTGATTAAACTAAATTTA+GGG	+	chr5_2:3443635-3443654	Msa0749980:intron	15.0%
!!!	AGTTAATTTAAAATATTGGT+AGG	+	chr5_2:3443668-3443687	Msa0749980:intron	15.0%
!!!	GTTAATTTAAAATATTGGTA+GGG	+	chr5_2:3443669-3443688	Msa0749980:intron	15.0%
!!	AATTCATTAATGTGATTATT+TGG	+	chr5_2:3443933-3443952	Msa0749980:intron	15.0%
!!	ATTCATTAATGTGATTATTT+GGG	+	chr5_2:3443934-3443953	Msa0749980:intron	15.0%
!!	AATTCATTAATGTGATTATT+TGG	+	chr5_2:3443933-3443952	Msa0749980:intron	15.0%
!!!	AATTGATTAATCTGTTTTAT+AGG	+	chr5_2:3444386-3444405	Msa0749980:intron	15.0%
!!	AAAAATACAATTAACAAACA+GGG	-	chr5_2:3444523-3444542	None:intergenic	15.0%
!!	TAAAAATACAATTAACAAAC+AGG	-	chr5_2:3444524-3444543	None:intergenic	15.0%
!!!	TAGATTATTTTATTCTTCTT+TGG	+	chr5_2:3444928-3444947	Msa0749980:three_prime_UTR	15.0%
!!	AAAGTGAAAAGTAAAATAAA+AGG	-	chr5_2:3445080-3445099	None:intergenic	15.0%
!!!	TTGTTGATTGAATTAAAGTT+AGG	+	chr5_2:3443562-3443581	Msa0749980:intron	20.0%
!!!	TGTTGATTGAATTAAAGTTA+GGG	+	chr5_2:3443563-3443582	Msa0749980:intron	20.0%
!!	AAAATTGAGTTAGTTAGATT+AGG	-	chr5_2:3443711-3443730	None:intergenic	20.0%
!!!	TGTTAGTTTATCAATTAGTT+TGG	+	chr5_2:3443840-3443859	Msa0749980:intron	20.0%
!!	GACTTAAAAAAGTAATTAGA+TGG	+	chr5_2:3443884-3443903	Msa0749980:intron	20.0%
!!	AAAAAGTAATTAGATGGTAA+TGG	+	chr5_2:3443890-3443909	Msa0749980:intron	20.0%
!!	AAAAGTAATTAGATGGTAAT+GGG	+	chr5_2:3443891-3443910	Msa0749980:intron	20.0%
!!!	AATCTGTTTTATAGGATAAA+TGG	+	chr5_2:3444394-3444413	Msa0749980:intron	20.0%
!!!	AAGTGTTATATTATTGATTC+AGG	-	chr5_2:3444487-3444506	None:intergenic	20.0%
!!!	TTGTTGATTGAATTAAAGTT+AGG	+	chr5_2:3443562-3443581	Msa0749980:intron	20.0%
!!!	TGTTGATTGAATTAAAGTTA+GGG	+	chr5_2:3443563-3443582	Msa0749980:intron	20.0%
!!	AAAATTGAGTTAGTTAGATT+AGG	-	chr5_2:3443711-3443730	None:intergenic	20.0%
!!!	TGTTAGTTTATCAATTAGTT+TGG	+	chr5_2:3443840-3443859	Msa0749980:intron	20.0%
!!	GACTTAAAAAAGTAATTAGA+TGG	+	chr5_2:3443884-3443903	Msa0749980:intron	20.0%
!!	AAAAAGTAATTAGATGGTAA+TGG	+	chr5_2:3443890-3443909	Msa0749980:intron	20.0%
!!	AAAAGTAATTAGATGGTAAT+GGG	+	chr5_2:3443891-3443910	Msa0749980:intron	20.0%
!!!	AATCTGTTTTATAGGATAAA+TGG	+	chr5_2:3444394-3444413	Msa0749980:intron	20.0%
!!!	AAGTGTTATATTATTGATTC+AGG	-	chr5_2:3444487-3444506	None:intergenic	20.0%
!	AATGGAAATAAATCACAGTT+TGG	-	chr5_2:3443026-3443045	None:intergenic	25.0%
!!!	GTTCTGTTGTTTGATTTTAA+AGG	-	chr5_2:3443149-3443168	None:intergenic	25.0%
!	TTAAAAGAAATCAAACCCTT+CGG	+	chr5_2:3443449-3443468	Msa0749980:intron	25.0%
!!!	TATTTGATTTTGGGAATCAA+TGG	+	chr5_2:3443607-3443626	Msa0749980:intron	25.0%
!!!	ATTTGATTTTGGGAATCAAT+GGG	+	chr5_2:3443608-3443627	Msa0749980:intron	25.0%
!!!	TTAGTTTGTATGAAATCAGT+TGG	+	chr5_2:3444005-3444024	Msa0749980:intron	25.0%
!!	TAGTTTGTATGAAATCAGTT+GGG	+	chr5_2:3444006-3444025	Msa0749980:intron	25.0%
!	AAAATTTCAAAGCAAAGGAA+AGG	-	chr5_2:3444850-3444869	None:intergenic	25.0%
!	TATGGAAAATTTCAAAGCAA+AGG	-	chr5_2:3444855-3444874	None:intergenic	25.0%
!	AATGGAAATAAATCACAGTT+TGG	-	chr5_2:3443026-3443045	None:intergenic	25.0%
!!!	GTTCTGTTGTTTGATTTTAA+AGG	-	chr5_2:3443149-3443168	None:intergenic	25.0%
!	TTAAAAGAAATCAAACCCTT+CGG	+	chr5_2:3443449-3443468	Msa0749980:intron	25.0%
!!!	TATTTGATTTTGGGAATCAA+TGG	+	chr5_2:3443607-3443626	Msa0749980:intron	25.0%
!!!	ATTTGATTTTGGGAATCAAT+GGG	+	chr5_2:3443608-3443627	Msa0749980:intron	25.0%
!!!	TTAGTTTGTATGAAATCAGT+TGG	+	chr5_2:3444005-3444024	Msa0749980:intron	25.0%
!!	TAGTTTGTATGAAATCAGTT+GGG	+	chr5_2:3444006-3444025	Msa0749980:intron	25.0%
!	AAAATTTCAAAGCAAAGGAA+AGG	-	chr5_2:3444850-3444869	None:intergenic	25.0%
!	TATGGAAAATTTCAAAGCAA+AGG	-	chr5_2:3444855-3444874	None:intergenic	25.0%
	GAAGCCTAAATTAATCACAA+CGG	-	chr5_2:3443065-3443084	None:intergenic	30.0%
!!	TGATTTTCGATTTAGGGTTA+GGG	-	chr5_2:3443223-3443242	None:intergenic	30.0%
!!	TTGATTTTCGATTTAGGGTT+AGG	-	chr5_2:3443224-3443243	None:intergenic	30.0%
!!	AGCGATTGATTTTCGATTTA+GGG	-	chr5_2:3443229-3443248	None:intergenic	30.0%
!!	TAGCGATTGATTTTCGATTT+AGG	-	chr5_2:3443230-3443249	None:intergenic	30.0%
	TCTTTCTCTTTCTCTTTCAA+TGG	+	chr5_2:3443268-3443287	Msa0749980:exon	30.0%
!!	GATAGATTTTGGGGATTAAT+GGG	+	chr5_2:3443471-3443490	Msa0749980:intron	30.0%
!!	ACTTAATTTTGGGGATCTAT+TGG	+	chr5_2:3443536-3443555	Msa0749980:intron	30.0%
!	GTCTAAAGCAATGTAATTTG+AGG	+	chr5_2:3443862-3443881	Msa0749980:intron	30.0%
!!	TAGATGGTAATGGGATTATT+TGG	+	chr5_2:3443900-3443919	Msa0749980:intron	30.0%
	AGTTTGTATGAAATCAGTTG+GGG	+	chr5_2:3444007-3444026	Msa0749980:intron	30.0%
	ACTTTACTTCTACAGAATAC+AGG	+	chr5_2:3444689-3444708	Msa0749980:intron	30.0%
	AAGAGAGAAACAATCATGTA+TGG	-	chr5_2:3444873-3444892	None:intergenic	30.0%
!!	TTTATTCTTCTTTGGAGCTT+TGG	+	chr5_2:3444936-3444955	Msa0749980:three_prime_UTR	30.0%
!!	TTATTCTTCTTTGGAGCTTT+GGG	+	chr5_2:3444937-3444956	Msa0749980:three_prime_UTR	30.0%
	TTTATTTACACCACAACACT+TGG	+	chr5_2:3445107-3445126	Msa0749980:three_prime_UTR	30.0%
!	ATAATGAATACCAAGTGTTG+TGG	-	chr5_2:3445120-3445139	None:intergenic	30.0%
	GAAGCCTAAATTAATCACAA+CGG	-	chr5_2:3443065-3443084	None:intergenic	30.0%
!!	TGATTTTCGATTTAGGGTTA+GGG	-	chr5_2:3443223-3443242	None:intergenic	30.0%
!!	TTGATTTTCGATTTAGGGTT+AGG	-	chr5_2:3443224-3443243	None:intergenic	30.0%
!!	AGCGATTGATTTTCGATTTA+GGG	-	chr5_2:3443229-3443248	None:intergenic	30.0%
!!	TAGCGATTGATTTTCGATTT+AGG	-	chr5_2:3443230-3443249	None:intergenic	30.0%
	TCTTTCTCTTTCTCTTTCAA+TGG	+	chr5_2:3443268-3443287	Msa0749980:exon	30.0%
!!	GATAGATTTTGGGGATTAAT+GGG	+	chr5_2:3443471-3443490	Msa0749980:intron	30.0%
!!	ACTTAATTTTGGGGATCTAT+TGG	+	chr5_2:3443536-3443555	Msa0749980:intron	30.0%
!	GTCTAAAGCAATGTAATTTG+AGG	+	chr5_2:3443862-3443881	Msa0749980:intron	30.0%
!!	TAGATGGTAATGGGATTATT+TGG	+	chr5_2:3443900-3443919	Msa0749980:intron	30.0%
	AGTTTGTATGAAATCAGTTG+GGG	+	chr5_2:3444007-3444026	Msa0749980:intron	30.0%
	ACTTTACTTCTACAGAATAC+AGG	+	chr5_2:3444689-3444708	Msa0749980:intron	30.0%
	AAGAGAGAAACAATCATGTA+TGG	-	chr5_2:3444873-3444892	None:intergenic	30.0%
!!	TTTATTCTTCTTTGGAGCTT+TGG	+	chr5_2:3444936-3444955	Msa0749980:three_prime_UTR	30.0%
!!	TTATTCTTCTTTGGAGCTTT+GGG	+	chr5_2:3444937-3444956	Msa0749980:three_prime_UTR	30.0%
	TTTATTTACACCACAACACT+TGG	+	chr5_2:3445107-3445126	Msa0749980:three_prime_UTR	30.0%
!	ATAATGAATACCAAGTGTTG+TGG	-	chr5_2:3445120-3445139	None:intergenic	30.0%
	GGCTAGTAATCTTGGATAAA+TGG	-	chr5_2:3443044-3443063	None:intergenic	35.0%
	CTAGCCGTTGTGATTAATTT+AGG	+	chr5_2:3443058-3443077	Msa0749980:five_prime_UTR	35.0%
	ACACTCAATCTGTTCTCAAA+AGG	+	chr5_2:3443372-3443391	Msa0749980:CDS	35.0%
!	AAACCCTTCGGATAGATTTT+GGG	+	chr5_2:3443461-3443480	Msa0749980:intron	35.0%
!!	GGATAGATTTTGGGGATTAA+TGG	+	chr5_2:3443470-3443489	Msa0749980:intron	35.0%
!!	TGGCTTTGATGGTAAGAAAT+TGG	+	chr5_2:3443783-3443802	Msa0749980:intron	35.0%
	CACAATATATTGTCCTCTTC+AGG	-	chr5_2:3444099-3444118	None:intergenic	35.0%
	AAGAGGACAATATATTGTGC+TGG	+	chr5_2:3444100-3444119	Msa0749980:CDS	35.0%
	GACAATATATTGTGCTGGAA+AGG	+	chr5_2:3444105-3444124	Msa0749980:CDS	35.0%
!	TCCCAATGAGTATCCTTTTA+AGG	+	chr5_2:3444191-3444210	Msa0749980:CDS	35.0%
	GCCTTAAAAGGATACTCATT+GGG	-	chr5_2:3444195-3444214	None:intergenic	35.0%
	AGCCTTAAAAGGATACTCAT+TGG	-	chr5_2:3444196-3444215	None:intergenic	35.0%
	TTGCCATGCAAATCAACATT+GGG	-	chr5_2:3444252-3444271	None:intergenic	35.0%
	ATTGCCATGCAAATCAACAT+TGG	-	chr5_2:3444253-3444272	None:intergenic	35.0%
	TTTGCATGGCAATATTTGCT+TGG	+	chr5_2:3444260-3444279	Msa0749980:CDS	35.0%
	TATTTGCTTGGACATTCTTC+AGG	+	chr5_2:3444272-3444291	Msa0749980:CDS	35.0%
	TTTCAAATTTACCTCCTAGC+AGG	-	chr5_2:3444464-3444483	None:intergenic	35.0%
	TTCTACAGAATACAGGAAGA+TGG	+	chr5_2:3444696-3444715	Msa0749980:intron	35.0%
!	TGCTGCTTAAACTTTGATCT+CGG	+	chr5_2:3444741-3444760	Msa0749980:exon	35.0%
	TGATTTCTCTTCTCTATGTC+TGG	+	chr5_2:3444771-3444790	Msa0749980:three_prime_UTR	35.0%
!!	ATCTGCTTTGGAAAAGAGAA+GGG	+	chr5_2:3444799-3444818	Msa0749980:three_prime_UTR	35.0%
!!	TATTCTTCTTTGGAGCTTTG+GGG	+	chr5_2:3444938-3444957	Msa0749980:three_prime_UTR	35.0%
	GGCTAGTAATCTTGGATAAA+TGG	-	chr5_2:3443044-3443063	None:intergenic	35.0%
	CTAGCCGTTGTGATTAATTT+AGG	+	chr5_2:3443058-3443077	Msa0749980:five_prime_UTR	35.0%
	ACACTCAATCTGTTCTCAAA+AGG	+	chr5_2:3443372-3443391	Msa0749980:CDS	35.0%
!	AAACCCTTCGGATAGATTTT+GGG	+	chr5_2:3443461-3443480	Msa0749980:intron	35.0%
!!	GGATAGATTTTGGGGATTAA+TGG	+	chr5_2:3443470-3443489	Msa0749980:intron	35.0%
!!	TGGCTTTGATGGTAAGAAAT+TGG	+	chr5_2:3443783-3443802	Msa0749980:intron	35.0%
	CACAATATATTGTCCTCTTC+AGG	-	chr5_2:3444099-3444118	None:intergenic	35.0%
	AAGAGGACAATATATTGTGC+TGG	+	chr5_2:3444100-3444119	Msa0749980:CDS	35.0%
	GACAATATATTGTGCTGGAA+AGG	+	chr5_2:3444105-3444124	Msa0749980:CDS	35.0%
!	TCCCAATGAGTATCCTTTTA+AGG	+	chr5_2:3444191-3444210	Msa0749980:CDS	35.0%
	GCCTTAAAAGGATACTCATT+GGG	-	chr5_2:3444195-3444214	None:intergenic	35.0%
	AGCCTTAAAAGGATACTCAT+TGG	-	chr5_2:3444196-3444215	None:intergenic	35.0%
	TTGCCATGCAAATCAACATT+GGG	-	chr5_2:3444252-3444271	None:intergenic	35.0%
	ATTGCCATGCAAATCAACAT+TGG	-	chr5_2:3444253-3444272	None:intergenic	35.0%
	TTTGCATGGCAATATTTGCT+TGG	+	chr5_2:3444260-3444279	Msa0749980:CDS	35.0%
	TATTTGCTTGGACATTCTTC+AGG	+	chr5_2:3444272-3444291	Msa0749980:CDS	35.0%
	TTTCAAATTTACCTCCTAGC+AGG	-	chr5_2:3444464-3444483	None:intergenic	35.0%
	TTCTACAGAATACAGGAAGA+TGG	+	chr5_2:3444696-3444715	Msa0749980:intron	35.0%
!	TGCTGCTTAAACTTTGATCT+CGG	+	chr5_2:3444741-3444760	Msa0749980:exon	35.0%
	TGATTTCTCTTCTCTATGTC+TGG	+	chr5_2:3444771-3444790	Msa0749980:three_prime_UTR	35.0%
!!	ATCTGCTTTGGAAAAGAGAA+GGG	+	chr5_2:3444799-3444818	Msa0749980:three_prime_UTR	35.0%
!!	TATTCTTCTTTGGAGCTTTG+GGG	+	chr5_2:3444938-3444957	Msa0749980:three_prime_UTR	35.0%
	ATCACAACGGCTAGTAATCT+TGG	-	chr5_2:3443052-3443071	None:intergenic	40.0%
!	AACGACGTCGAATTTAAGGT+CGG	-	chr5_2:3443109-3443128	None:intergenic	40.0%
	ACGAAACGACGTCGAATTTA+AGG	-	chr5_2:3443113-3443132	None:intergenic	40.0%
!	AGGGTTAGGGTTTTTGTTGA+AGG	-	chr5_2:3443210-3443229	None:intergenic	40.0%
!	GATTGAGTGTCAACGGATTT+AGG	-	chr5_2:3443362-3443381	None:intergenic	40.0%
	GAGAACAGATTGAGTGTCAA+CGG	-	chr5_2:3443369-3443388	None:intergenic	40.0%
!	CAAACCCTTCGGATAGATTT+TGG	+	chr5_2:3443460-3443479	Msa0749980:intron	40.0%
!	AACCCTTCGGATAGATTTTG+GGG	+	chr5_2:3443462-3443481	Msa0749980:intron	40.0%
	ATCCCCAAAATCTATCCGAA+GGG	-	chr5_2:3443467-3443486	None:intergenic	40.0%
	AATCCCCAAAATCTATCCGA+AGG	-	chr5_2:3443468-3443487	None:intergenic	40.0%
!!	GTCTGAATTGATGGCTTTGA+TGG	+	chr5_2:3443772-3443791	Msa0749980:CDS	40.0%
	GTGATTATTTGGCAGATGAG+TGG	+	chr5_2:3444051-3444070	Msa0749980:intron	40.0%
!!	TGTATCTGCTTTTCCTGAAG+AGG	+	chr5_2:3444083-3444102	Msa0749980:CDS	40.0%
	AGCAAAGACACTGTCTTTGA+AGG	+	chr5_2:3444141-3444160	Msa0749980:CDS	40.0%
!!!	GTATCCTTTTAAGGCTCCAA+AGG	+	chr5_2:3444200-3444219	Msa0749980:CDS	40.0%
!!	TTGACCTTTGGAGCCTTAAA+AGG	-	chr5_2:3444207-3444226	None:intergenic	40.0%
!	GTGGTGTCAAATTTGACCTT+TGG	-	chr5_2:3444219-3444238	None:intergenic	40.0%
	TGCCATGCAAATCAACATTG+GGG	-	chr5_2:3444251-3444270	None:intergenic	40.0%
	TTGTCAATTCAAAGCCTGCT+AGG	+	chr5_2:3444447-3444466	Msa0749980:CDS	40.0%
	TACAGAATACAGGAAGATGG+TGG	+	chr5_2:3444699-3444718	Msa0749980:intron	40.0%
	GAGATCAAAGTTTAAGCAGC+AGG	-	chr5_2:3444742-3444761	None:intergenic	40.0%
!!	GATCTGCTTTGGAAAAGAGA+AGG	+	chr5_2:3444798-3444817	Msa0749980:three_prime_UTR	40.0%
!!	ATTCTTCTTTGGAGCTTTGG+GGG	+	chr5_2:3444939-3444958	Msa0749980:three_prime_UTR	40.0%
	ATCACAACGGCTAGTAATCT+TGG	-	chr5_2:3443052-3443071	None:intergenic	40.0%
!	AACGACGTCGAATTTAAGGT+CGG	-	chr5_2:3443109-3443128	None:intergenic	40.0%
	ACGAAACGACGTCGAATTTA+AGG	-	chr5_2:3443113-3443132	None:intergenic	40.0%
!	AGGGTTAGGGTTTTTGTTGA+AGG	-	chr5_2:3443210-3443229	None:intergenic	40.0%
!	GATTGAGTGTCAACGGATTT+AGG	-	chr5_2:3443362-3443381	None:intergenic	40.0%
	GAGAACAGATTGAGTGTCAA+CGG	-	chr5_2:3443369-3443388	None:intergenic	40.0%
!	CAAACCCTTCGGATAGATTT+TGG	+	chr5_2:3443460-3443479	Msa0749980:intron	40.0%
!	AACCCTTCGGATAGATTTTG+GGG	+	chr5_2:3443462-3443481	Msa0749980:intron	40.0%
	ATCCCCAAAATCTATCCGAA+GGG	-	chr5_2:3443467-3443486	None:intergenic	40.0%
	AATCCCCAAAATCTATCCGA+AGG	-	chr5_2:3443468-3443487	None:intergenic	40.0%
!!	GTCTGAATTGATGGCTTTGA+TGG	+	chr5_2:3443772-3443791	Msa0749980:CDS	40.0%
	GTGATTATTTGGCAGATGAG+TGG	+	chr5_2:3444051-3444070	Msa0749980:intron	40.0%
!!	TGTATCTGCTTTTCCTGAAG+AGG	+	chr5_2:3444083-3444102	Msa0749980:CDS	40.0%
	AGCAAAGACACTGTCTTTGA+AGG	+	chr5_2:3444141-3444160	Msa0749980:CDS	40.0%
!!!	GTATCCTTTTAAGGCTCCAA+AGG	+	chr5_2:3444200-3444219	Msa0749980:CDS	40.0%
!!	TTGACCTTTGGAGCCTTAAA+AGG	-	chr5_2:3444207-3444226	None:intergenic	40.0%
!	GTGGTGTCAAATTTGACCTT+TGG	-	chr5_2:3444219-3444238	None:intergenic	40.0%
	TGCCATGCAAATCAACATTG+GGG	-	chr5_2:3444251-3444270	None:intergenic	40.0%
	TTGTCAATTCAAAGCCTGCT+AGG	+	chr5_2:3444447-3444466	Msa0749980:CDS	40.0%
	TACAGAATACAGGAAGATGG+TGG	+	chr5_2:3444699-3444718	Msa0749980:intron	40.0%
	GAGATCAAAGTTTAAGCAGC+AGG	-	chr5_2:3444742-3444761	None:intergenic	40.0%
!!	GATCTGCTTTGGAAAAGAGA+AGG	+	chr5_2:3444798-3444817	Msa0749980:three_prime_UTR	40.0%
!!	ATTCTTCTTTGGAGCTTTGG+GGG	+	chr5_2:3444939-3444958	Msa0749980:three_prime_UTR	40.0%
	ATTCGACGTCGTTTCGTGAA+AGG	+	chr5_2:3443116-3443135	Msa0749980:five_prime_UTR	45.0%
!	TGAGTGTCAACGGATTTAGG+CGG	-	chr5_2:3443359-3443378	None:intergenic	45.0%
!!	GTGGGTTGTTGCAATTTTGC+AGG	+	chr5_2:3443744-3443763	Msa0749980:intron	45.0%
	CAGGTTGCAGTCTGAATTGA+TGG	+	chr5_2:3443763-3443782	Msa0749980:intron	45.0%
	TGCTGGAAAGGAACAATAGC+AGG	+	chr5_2:3444117-3444136	Msa0749980:CDS	45.0%
	CATGCAAATCAACATTGGGG+TGG	-	chr5_2:3444248-3444267	None:intergenic	45.0%
!!	CACCCCAATGTTGATTTGCA+TGG	+	chr5_2:3444246-3444265	Msa0749980:CDS	45.0%
	GTGTCAGTAGCATGTGATGA+TGG	+	chr5_2:3444306-3444325	Msa0749980:intron	45.0%
	TCAATTCAAAGCCTGCTAGG+AGG	+	chr5_2:3444450-3444469	Msa0749980:CDS	45.0%
	TTTAGCGGCGAGCTAATGTT+TGG	-	chr5_2:3444566-3444585	None:intergenic	45.0%
!!	CAGCTTTGGAGCAATCAAGA+AGG	+	chr5_2:3444599-3444618	Msa0749980:CDS	45.0%
	TGTCTGGTTGTGATCTGCTT+TGG	+	chr5_2:3444787-3444806	Msa0749980:three_prime_UTR	45.0%
	ATTCGACGTCGTTTCGTGAA+AGG	+	chr5_2:3443116-3443135	Msa0749980:five_prime_UTR	45.0%
!	TGAGTGTCAACGGATTTAGG+CGG	-	chr5_2:3443359-3443378	None:intergenic	45.0%
!!	GTGGGTTGTTGCAATTTTGC+AGG	+	chr5_2:3443744-3443763	Msa0749980:intron	45.0%
	CAGGTTGCAGTCTGAATTGA+TGG	+	chr5_2:3443763-3443782	Msa0749980:intron	45.0%
	TGCTGGAAAGGAACAATAGC+AGG	+	chr5_2:3444117-3444136	Msa0749980:CDS	45.0%
	CATGCAAATCAACATTGGGG+TGG	-	chr5_2:3444248-3444267	None:intergenic	45.0%
!!	CACCCCAATGTTGATTTGCA+TGG	+	chr5_2:3444246-3444265	Msa0749980:CDS	45.0%
	GTGTCAGTAGCATGTGATGA+TGG	+	chr5_2:3444306-3444325	Msa0749980:intron	45.0%
	TCAATTCAAAGCCTGCTAGG+AGG	+	chr5_2:3444450-3444469	Msa0749980:CDS	45.0%
	TTTAGCGGCGAGCTAATGTT+TGG	-	chr5_2:3444566-3444585	None:intergenic	45.0%
!!	CAGCTTTGGAGCAATCAAGA+AGG	+	chr5_2:3444599-3444618	Msa0749980:CDS	45.0%
	TGTCTGGTTGTGATCTGCTT+TGG	+	chr5_2:3444787-3444806	Msa0749980:three_prime_UTR	45.0%
!!!	TTTTTTAATTTACTTAATTT+TGG	+	chr5_2:3443525-3443544	Msa0749980:intron	5.0%
!!!	TTTTTAATTTACTTAATTTT+GGG	+	chr5_2:3443526-3443545	Msa0749980:intron	5.0%
!!!	AATTTTTTTTTTTTTTTTTG+TGG	+	chr5_2:3443725-3443744	Msa0749980:intron	5.0%
!!!	ATTTTTTTTTTTTTTTTTGT+GGG	+	chr5_2:3443726-3443745	Msa0749980:intron	5.0%
!!!	TTTTTTAATTTACTTAATTT+TGG	+	chr5_2:3443525-3443544	Msa0749980:intron	5.0%
!!!	TTTTTAATTTACTTAATTTT+GGG	+	chr5_2:3443526-3443545	Msa0749980:intron	5.0%
!!!	AATTTTTTTTTTTTTTTTTG+TGG	+	chr5_2:3443725-3443744	Msa0749980:intron	5.0%
!!!	ATTTTTTTTTTTTTTTTTGT+GGG	+	chr5_2:3443726-3443745	Msa0749980:intron	5.0%
!	TGTCAACGGATTTAGGCGGA+GGG	-	chr5_2:3443355-3443374	None:intergenic	50.0%
	TGGCAGATGAGTGGAGATTC+TGG	+	chr5_2:3444060-3444079	Msa0749980:intron	50.0%
!	AACATTGGGGTGGAAGCATG+TGG	-	chr5_2:3444238-3444257	None:intergenic	50.0%
	TGTGCTGCCTGTGGATTTAG+CGG	-	chr5_2:3444581-3444600	None:intergenic	50.0%
!	TGTCAACGGATTTAGGCGGA+GGG	-	chr5_2:3443355-3443374	None:intergenic	50.0%
	TGGCAGATGAGTGGAGATTC+TGG	+	chr5_2:3444060-3444079	Msa0749980:intron	50.0%
!	AACATTGGGGTGGAAGCATG+TGG	-	chr5_2:3444238-3444257	None:intergenic	50.0%
	TGTGCTGCCTGTGGATTTAG+CGG	-	chr5_2:3444581-3444600	None:intergenic	50.0%
	GGAGGGAGAGGTTGCATTGA+AGG	-	chr5_2:3443338-3443357	None:intergenic	55.0%
!	GTGTCAACGGATTTAGGCGG+AGG	-	chr5_2:3443356-3443375	None:intergenic	55.0%
	TAGCTCGCCGCTAAATCCAC+AGG	+	chr5_2:3444571-3444590	Msa0749980:CDS	55.0%
	ATCCACAGGCAGCACAGCTT+TGG	+	chr5_2:3444585-3444604	Msa0749980:CDS	55.0%
	GGAGGGAGAGGTTGCATTGA+AGG	-	chr5_2:3443338-3443357	None:intergenic	55.0%
!	GTGTCAACGGATTTAGGCGG+AGG	-	chr5_2:3443356-3443375	None:intergenic	55.0%
	TAGCTCGCCGCTAAATCCAC+AGG	+	chr5_2:3444571-3444590	Msa0749980:CDS	55.0%
	ATCCACAGGCAGCACAGCTT+TGG	+	chr5_2:3444585-3444604	Msa0749980:CDS	55.0%
	ACGGATTTAGGCGGAGGGAG+AGG	-	chr5_2:3443350-3443369	None:intergenic	60.0%
	CTCCAAAGCTGTGCTGCCTG+TGG	-	chr5_2:3444590-3444609	None:intergenic	60.0%
	ACGGATTTAGGCGGAGGGAG+AGG	-	chr5_2:3443350-3443369	None:intergenic	60.0%
	CTCCAAAGCTGTGCTGCCTG+TGG	-	chr5_2:3444590-3444609	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_2	gene	3442979	3445140	3442979	ID=Msa0749980;Name=Msa0749980
chr5_2	mRNA	3442979	3445140	3442979	ID=Msa0749980-mRNA-1;Parent=Msa0749980;Name=Msa0749980-mRNA-1;_AED=0.07;_eAED=0.07;_QI=308\|1\|1\|1\|1\|1\|6\|390\|177
chr5_2	exon	3442979	3443393	3442979	ID=Msa0749980-mRNA-1:exon:1192;Parent=Msa0749980-mRNA-1
chr5_2	exon	3443766	3443793	3443766	ID=Msa0749980-mRNA-1:exon:1193;Parent=Msa0749980-mRNA-1
chr5_2	exon	3444066	3444293	3444066	ID=Msa0749980-mRNA-1:exon:1194;Parent=Msa0749980-mRNA-1
chr5_2	exon	3444408	3444471	3444408	ID=Msa0749980-mRNA-1:exon:1195;Parent=Msa0749980-mRNA-1
chr5_2	exon	3444561	3444620	3444561	ID=Msa0749980-mRNA-1:exon:1196;Parent=Msa0749980-mRNA-1
chr5_2	exon	3444704	3445140	3444704	ID=Msa0749980-mRNA-1:exon:1197;Parent=Msa0749980-mRNA-1
chr5_2	five_prime_UTR	3442979	3443286	3442979	ID=Msa0749980-mRNA-1:five_prime_utr;Parent=Msa0749980-mRNA-1
chr5_2	CDS	3443287	3443393	3443287	ID=Msa0749980-mRNA-1:cds;Parent=Msa0749980-mRNA-1
chr5_2	CDS	3443766	3443793	3443766	ID=Msa0749980-mRNA-1:cds;Parent=Msa0749980-mRNA-1
chr5_2	CDS	3444066	3444293	3444066	ID=Msa0749980-mRNA-1:cds;Parent=Msa0749980-mRNA-1
chr5_2	CDS	3444408	3444471	3444408	ID=Msa0749980-mRNA-1:cds;Parent=Msa0749980-mRNA-1
chr5_2	CDS	3444561	3444620	3444561	ID=Msa0749980-mRNA-1:cds;Parent=Msa0749980-mRNA-1
chr5_2	CDS	3444704	3444750	3444704	ID=Msa0749980-mRNA-1:cds;Parent=Msa0749980-mRNA-1
chr5_2	three_prime_UTR	3444751	3445140	3444751	ID=Msa0749980-mRNA-1:three_prime_utr;Parent=Msa0749980-mRNA-1

Gene Sequence

>Msa0749980

ATGGCTAGCGCTAACGTTCAAACTGAAGCTTCTCAAAGCAACATTGCTCCTTCAATGCAACCTCTCCCTCCGCCTAAATCCGTTGACACTCAATCTGTTCTCAAAAGGTTGCAGTCTGAATTGATGGCTTTGATGATGAGTGGAGATTCTGGTGTATCTGCTTTTCCTGAAGAGGACAATATATTGTGCTGGAAAGGAACAATAGCAGGAAGCAAAGACACTGTCTTTGAAGGAACAGAATACAAATTGTCACTTTCATTTCCCAATGAGTATCCTTTTAAGGCTCCAAAGGTCAAATTTGACACCACATGCTTCCACCCCAATGTTGATTTGCATGGCAATATTTGCTTGGACATTCTTCAGGATAAATGGTCATCTGCTTATGATGTTAGAACAATTCTTTTGTCAATTCAAAGCCTGCTAGGAGAGCCAAACATTAGCTCGCCGCTAAATCCACAGGCAGCACAGCTTTGGAGCAATCAAGAAGAATACAGGAAGATGGTGGAGAAGTTGTACAAAGATCCTGCTGCTTAA

Protein sequence

>Msa0749980

MASANVQTEASQSNIAPSMQPLPPPKSVDTQSVLKRLQSELMALMMSGDSGVSAFPEEDNILCWKGTIAGSKDTVFEGTEYKLSLSFPNEYPFKAPKVKFDTTCFHPNVDLHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNPQAAQLWSNQEEYRKMVEKLYKDPAA*