Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0816270 | XP_024640360.1 | 95.118 | 594 | 27 | 1 | 18 | 609 | 18 | 611 | 0.0 | 1133 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0816270 | sp|F4IMH3|NOC4_ARATH | 57.986 | 576 | 229 | 6 | 12 | 581 | 8 | 576 | 0.0 | 668 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0816270 | G7K1U1 | 94.444 | 594 | 27 | 2 | 18 | 609 | 18 | 607 | 0.0 | 1118 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0082430 | Msa0816270 | 0.802810 | 4.701549e-49 | -8.615850e-47 |
Msa0737180 | Msa0816270 | 0.882962 | 6.706356e-71 | -8.615850e-47 |
Msa0816270 | Msa0856530 | 0.834013 | 3.831242e-56 | -8.615850e-47 |
Msa0174830 | Msa0816270 | 0.807970 | 3.895980e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0816270 | MtrunA17_Chr5g0434811 | 94.444 | 594 | 27 | 2 | 18 | 609 | 18 | 607 | 0.0 | 1118 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0816270 | AT2G17250.1 | 57.986 | 576 | 229 | 6 | 12 | 581 | 8 | 576 | 0.0 | 668 |
Find 143 sgRNAs with CRISPR-Local
Find 527 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACATTATTGTTACGTTTCT+TGG | 0.096967 | 5_3:-50490230 | None:intergenic |
ACAAATTAGTAGTATTAATT+AGG | 0.097140 | 5_3:-50496427 | None:intergenic |
AATGGTCAAGGCCTGATTTC+TGG | 0.177335 | 5_3:-50494830 | None:intergenic |
CTTCATCTTCTTCGCAATTC+TGG | 0.241906 | 5_3:-50490466 | None:intergenic |
TTGGAGGGAAAAGATGTTTC+AGG | 0.244460 | 5_3:+50489095 | Msa0816270:CDS |
TTGCTTTCAGTTCCACCTTC+TGG | 0.244476 | 5_3:+50493245 | Msa0816270:CDS |
AGAAAAGCTCACAAGAAATT+TGG | 0.246404 | 5_3:+50489076 | Msa0816270:CDS |
CAAATTAGTAGTATTAATTA+GGG | 0.252601 | 5_3:-50496426 | None:intergenic |
CTTGAGCAGGAAGCTCTCTT+TGG | 0.255727 | 5_3:+50495310 | Msa0816270:intron |
TTTAGGTTTGCTTTGTCTCT+TGG | 0.268396 | 5_3:+50495496 | Msa0816270:intron |
CAGATTCCTCAATGTTAAAA+TGG | 0.289979 | 5_3:-50494848 | None:intergenic |
GAACGGGGCTAAAGATTTAT+TGG | 0.290532 | 5_3:+50496129 | Msa0816270:CDS |
AAGCTTGGATTGCGTATCTT+AGG | 0.300738 | 5_3:+50490502 | Msa0816270:CDS |
CCAATCCATGCTGGGTCATT+AGG | 0.303403 | 5_3:-50492063 | None:intergenic |
TTAGGTTTGCTTTGTCTCTT+GGG | 0.321498 | 5_3:+50495497 | Msa0816270:intron |
ATTAGTTCCATCTATCTTCA+TGG | 0.328121 | 5_3:+50492120 | Msa0816270:CDS |
TGAGCTTAATTGACTTTCAT+TGG | 0.332356 | 5_3:-50489284 | None:intergenic |
GGTTCTTATGCAACAATACT+TGG | 0.336089 | 5_3:+50495577 | Msa0816270:CDS |
TGAATGCGATGAAACTATTA+AGG | 0.339514 | 5_3:+50488209 | Msa0816270:CDS |
GAAGGGAGTTGAGGGAGGAG+AGG | 0.348058 | 5_3:-50488063 | None:intergenic |
GTGGTGGTTGCGGTGGCGGA+AGG | 0.353194 | 5_3:-50488081 | None:intergenic |
CTGCAGATACTTGAGATATA+TGG | 0.357343 | 5_3:+50496332 | Msa0816270:three_prime_UTR |
ATGTGGTGAGGTGGAGAAGA+AGG | 0.362280 | 5_3:-50488003 | None:intergenic |
GCTGGTGGTGGTTGCGGTGG+CGG | 0.371522 | 5_3:-50488085 | None:intergenic |
TCAGTGATGCTGTGTTGTTT+TGG | 0.385668 | 5_3:-50487901 | None:intergenic |
ACCCCTTCTTCCAGCTTACC+TGG | 0.387473 | 5_3:+50493190 | Msa0816270:CDS |
TGCATTGGTTATTACAGCTC+TGG | 0.389369 | 5_3:+50493268 | Msa0816270:CDS |
TATTAATTAGGGGTATGTTT+AGG | 0.389918 | 5_3:-50496415 | None:intergenic |
GCTGGGTCATTAGGATATAA+AGG | 0.391038 | 5_3:-50492054 | None:intergenic |
AAAACAAGCGAAGTTAATAT+TGG | 0.391828 | 5_3:+50495541 | Msa0816270:CDS |
TTGAGCAGGAAGCTCTCTTT+GGG | 0.394155 | 5_3:+50495311 | Msa0816270:intron |
CTGGAAGAAGGGGTGACTTT+AGG | 0.399170 | 5_3:-50493181 | None:intergenic |
TGTGGTGAGGTGGAGAAGAA+GGG | 0.400686 | 5_3:-50488002 | None:intergenic |
GAGTTTGTTAAGGTTGCTAA+TGG | 0.401292 | 5_3:+50488255 | Msa0816270:CDS |
CGAAGAGACTGCTTCTAACT+TGG | 0.405411 | 5_3:+50494779 | Msa0816270:CDS |
GAGATGAATGTGAGGAGGAG+AGG | 0.410717 | 5_3:-50487979 | None:intergenic |
AGATGAATGTGAGGAGGAGA+GGG | 0.412733 | 5_3:-50487978 | None:intergenic |
AAGGGAGTTGAGGGAGGAGA+GGG | 0.413318 | 5_3:-50488062 | None:intergenic |
CGATCAACTGTTTGGTGCAC+CGG | 0.416098 | 5_3:+50493318 | Msa0816270:CDS |
GCAAAGCTCTGCCAGAAATC+AGG | 0.417403 | 5_3:+50494819 | Msa0816270:CDS |
TTAGAAATGTGGAGTGTATC+AGG | 0.418848 | 5_3:+50489729 | Msa0816270:CDS |
CCACGTGAGGTAAATGAATT+CGG | 0.420969 | 5_3:-50488130 | None:intergenic |
GGAGGAGCTGGTGGTGGTTG+CGG | 0.422441 | 5_3:-50488091 | None:intergenic |
GTGAAATTAAAATGTTTGTT+TGG | 0.426506 | 5_3:+50496223 | Msa0816270:three_prime_UTR |
TCATCGACAATAATGAGAAC+GGG | 0.429049 | 5_3:+50496113 | Msa0816270:CDS |
TCTTAGGTTGCCACTTCCAT+TGG | 0.431065 | 5_3:+50490518 | Msa0816270:CDS |
TACTTTGATGGAGTTTGTTA+AGG | 0.432512 | 5_3:+50488245 | Msa0816270:CDS |
AGTTGTGCTTGATACTTTGA+TGG | 0.436883 | 5_3:+50488233 | Msa0816270:CDS |
AGTTCCACCTTCTGGTGCAT+TGG | 0.437968 | 5_3:+50493253 | Msa0816270:CDS |
ACATCCTTCGATCAACTGTT+TGG | 0.439932 | 5_3:+50493310 | Msa0816270:CDS |
AGGGAGGAGAGGGAGGAAGA+AGG | 0.440748 | 5_3:-50488052 | None:intergenic |
GGAGTTGAGGGAGGAGAGGG+AGG | 0.440858 | 5_3:-50488059 | None:intergenic |
AGTTAAAATTTACTAAAGCT+TGG | 0.442017 | 5_3:+50490487 | Msa0816270:CDS |
CTCATAGCGCCTGACTTCAT+AGG | 0.448545 | 5_3:-50494873 | None:intergenic |
AATGAGGCAGCCAGGTAAGC+TGG | 0.457951 | 5_3:-50493200 | None:intergenic |
TGGTGGTTGCGGTGGCGGAA+GGG | 0.462845 | 5_3:-50488080 | None:intergenic |
CGGTGGCGGAAGGGAGTTGA+GGG | 0.464726 | 5_3:-50488071 | None:intergenic |
ACCACCACCAGCTCCTCCTC+TGG | 0.470797 | 5_3:+50488096 | Msa0816270:CDS |
TTTCTTCATTGCAGGTTCCA+TGG | 0.470904 | 5_3:-50487854 | None:intergenic |
TTGGGTATTCCAATCCATGC+TGG | 0.473646 | 5_3:-50492072 | None:intergenic |
GTTGTTGATGTGTGAGGCGG+AGG | 0.482954 | 5_3:-50487953 | None:intergenic |
CCTAATGACCCAGCATGGAT+TGG | 0.485238 | 5_3:+50492063 | Msa0816270:CDS |
CAGCCAGGTAAGCTGGAAGA+AGG | 0.488496 | 5_3:-50493193 | None:intergenic |
AGCCAGGTAAGCTGGAAGAA+GGG | 0.489279 | 5_3:-50493192 | None:intergenic |
ATTTCAAGTATATTGATGTT+CGG | 0.489524 | 5_3:+50488494 | Msa0816270:CDS |
GGAGAGAAGTTCTTGACCTA+GGG | 0.491411 | 5_3:-50487932 | None:intergenic |
ACTCAATTTCTTTGCAAATG+AGG | 0.492729 | 5_3:-50493216 | None:intergenic |
CAAAACACTTACCGTGAGAC+AGG | 0.494028 | 5_3:-50495366 | None:intergenic |
GAAGAGAGAGAATCGATTCG+AGG | 0.495834 | 5_3:-50488026 | None:intergenic |
GTGGTGAGGTGGAGAAGAAG+GGG | 0.502021 | 5_3:-50488001 | None:intergenic |
TGAATGTGAGGAGGAGAGGG+AGG | 0.502763 | 5_3:-50487975 | None:intergenic |
GAATCTGATCCTATGAAGTC+AGG | 0.505902 | 5_3:+50494864 | Msa0816270:CDS |
TTGACAAGGTCGTATGATGT+AGG | 0.506754 | 5_3:+50492001 | Msa0816270:CDS |
TTCTCTGAAAAGAGAGAGGA+TGG | 0.507254 | 5_3:-50496043 | None:intergenic |
GTAAATGAATTCGGATTGAT+CGG | 0.509695 | 5_3:-50488121 | None:intergenic |
GATTACACGGAGGGTGAAGC+AGG | 0.509973 | 5_3:+50495994 | Msa0816270:intron |
TCTTTGCAAATGAGGCAGCC+AGG | 0.517329 | 5_3:-50493208 | None:intergenic |
ATCGGAACCAGAGGAGGAGC+TGG | 0.519725 | 5_3:-50488103 | None:intergenic |
GGAGCTGGTGGTGGTTGCGG+TGG | 0.521533 | 5_3:-50488088 | None:intergenic |
TGGGTATTCCAATCCATGCT+GGG | 0.522547 | 5_3:-50492071 | None:intergenic |
AATAATAACTTACAATACTA+CGG | 0.526362 | 5_3:-50488314 | None:intergenic |
AGGAGAGAAGTTCTTGACCT+AGG | 0.526973 | 5_3:-50487933 | None:intergenic |
TTTGTTAAGGTTGCTAATGG+TGG | 0.527835 | 5_3:+50488258 | Msa0816270:CDS |
AGAGAATCGATTCGAGGATG+TGG | 0.533005 | 5_3:-50488020 | None:intergenic |
ACCAGAGGAGGAGCTGGTGG+TGG | 0.535853 | 5_3:-50488097 | None:intergenic |
AAGAAGGGGAGATGAATGTG+AGG | 0.536341 | 5_3:-50487987 | None:intergenic |
CCGAATTCATTTACCTCACG+TGG | 0.537243 | 5_3:+50488130 | Msa0816270:CDS |
GCGGTGGCGGAAGGGAGTTG+AGG | 0.538128 | 5_3:-50488072 | None:intergenic |
GATAAAACTGCAAGCGCAGA+TGG | 0.542599 | 5_3:+50489259 | Msa0816270:CDS |
ATCACTTATCGATTGTCTTG+TGG | 0.543229 | 5_3:+50488182 | Msa0816270:CDS |
ATGAAAGTCAATTAAGCTCA+AGG | 0.545065 | 5_3:+50489287 | Msa0816270:CDS |
GAGGAATCACTGCTTGGTGA+AGG | 0.547446 | 5_3:-50491865 | None:intergenic |
GGCTAAAGATTTATTGGACC+AGG | 0.548798 | 5_3:+50496135 | Msa0816270:CDS |
ACCTCTTTGAACACATCCAA+TGG | 0.549353 | 5_3:-50490534 | None:intergenic |
GATCAACTGTTTGGTGCACC+GGG | 0.550891 | 5_3:+50493319 | Msa0816270:CDS |
AAAGCTCACAAGAAATTTGG+AGG | 0.555352 | 5_3:+50489079 | Msa0816270:CDS |
TTGAACACATCCAATGGAAG+TGG | 0.555934 | 5_3:-50490528 | None:intergenic |
GCCAGGTAAGCTGGAAGAAG+GGG | 0.560855 | 5_3:-50493191 | None:intergenic |
TCCATTGGATGTGTTCAAAG+AGG | 0.564996 | 5_3:+50490533 | Msa0816270:CDS |
GGTGTTTACCATAACATGAT+GGG | 0.565453 | 5_3:-50491899 | None:intergenic |
ATATGGTGTAGTACATATTG+TGG | 0.566500 | 5_3:-50489665 | None:intergenic |
AAGGGGAGATGAATGTGAGG+AGG | 0.575380 | 5_3:-50487984 | None:intergenic |
AGGGAGGTTGTTGATGTGTG+AGG | 0.576196 | 5_3:-50487959 | None:intergenic |
TTGCACCATTGCAGATTACA+CGG | 0.577570 | 5_3:+50495981 | Msa0816270:intron |
TGGCGGAAGGGAGTTGAGGG+AGG | 0.579360 | 5_3:-50488068 | None:intergenic |
CCTCAATGTTAAAATGGTCA+AGG | 0.580409 | 5_3:-50494842 | None:intergenic |
AACTTGGATAATGCTCAGAA+TGG | 0.586561 | 5_3:+50494795 | Msa0816270:CDS |
AGACAGGAGGACAGTAGTGG+TGG | 0.591867 | 5_3:-50495350 | None:intergenic |
ACAGATGAGGAATCACTGCT+TGG | 0.595439 | 5_3:-50491871 | None:intergenic |
GATTCGAGGATGTGGTGAGG+TGG | 0.595441 | 5_3:-50488012 | None:intergenic |
TCATGGCAAAACATCGTGCA+AGG | 0.595702 | 5_3:+50492137 | Msa0816270:CDS |
ACCATTGCAGATTACACGGA+GGG | 0.596485 | 5_3:+50495985 | Msa0816270:intron |
TTATGCAACAATACTTGGAG+CGG | 0.603488 | 5_3:+50495582 | Msa0816270:CDS |
TTCGGATTGATCGGAACCAG+AGG | 0.606360 | 5_3:-50488112 | None:intergenic |
TATATCCTAATGACCCAGCA+TGG | 0.606697 | 5_3:+50492058 | Msa0816270:CDS |
GAGGTTGTTGATGTGTGAGG+CGG | 0.608742 | 5_3:-50487956 | None:intergenic |
TGCAACAATACTTGGAGCGG+AGG | 0.610817 | 5_3:+50495585 | Msa0816270:CDS |
ACTTATCGATTGTCTTGTGG+CGG | 0.611390 | 5_3:+50488185 | Msa0816270:CDS |
ATCATCGACAATAATGAGAA+CGG | 0.612651 | 5_3:+50496112 | Msa0816270:CDS |
ATCATTCTCTGAAAAGAGAG+AGG | 0.615510 | 5_3:-50496047 | None:intergenic |
ATAACCAATGCACCAGAAGG+TGG | 0.616650 | 5_3:-50493257 | None:intergenic |
TGCACCAAACAGTTGATCGA+AGG | 0.618010 | 5_3:-50493314 | None:intergenic |
CATATTGTGGATGATGCACT+CGG | 0.624795 | 5_3:-50489652 | None:intergenic |
ATACATCTGATTTAGAAATG+TGG | 0.629117 | 5_3:+50489718 | Msa0816270:CDS |
ACTACTGTCCTCCTGTCTCA+CGG | 0.630327 | 5_3:+50495355 | Msa0816270:CDS |
ATCACTGAAATCAAAACCCT+AGG | 0.631706 | 5_3:+50487916 | Msa0816270:CDS |
GTAATAACCAATGCACCAGA+AGG | 0.635450 | 5_3:-50493260 | None:intergenic |
AAGCTCACAAGAAATTTGGA+GGG | 0.638699 | 5_3:+50489080 | Msa0816270:CDS |
GGAACCAGAGGAGGAGCTGG+TGG | 0.642590 | 5_3:-50488100 | None:intergenic |
ATCGATTCGAGGATGTGGTG+AGG | 0.646651 | 5_3:-50488015 | None:intergenic |
GTGAGACAGGAGGACAGTAG+TGG | 0.650028 | 5_3:-50495353 | None:intergenic |
CATTTGCAAAGAAATTGAGT+AGG | 0.655411 | 5_3:+50493219 | Msa0816270:CDS |
GAAACTCGTCGAACTTCGAA+CGG | 0.658319 | 5_3:-50488155 | None:intergenic |
ACTTCGAACGGAGCCACGTG+AGG | 0.663920 | 5_3:-50488143 | None:intergenic |
TGTGCAGTGATTTCTTGACA+AGG | 0.666059 | 5_3:+50491987 | Msa0816270:intron |
GGATTGATCGGAACCAGAGG+AGG | 0.668743 | 5_3:-50488109 | None:intergenic |
AGGTGGTGTAGTCAGCGTGA+TGG | 0.671351 | 5_3:+50492021 | Msa0816270:CDS |
AACACTTACCGTGAGACAGG+AGG | 0.675774 | 5_3:-50495363 | None:intergenic |
CATCGACAATAATGAGAACG+GGG | 0.677716 | 5_3:+50496114 | Msa0816270:CDS |
ACAAGGTCGTATGATGTAGG+TGG | 0.691770 | 5_3:+50492004 | Msa0816270:CDS |
ATGATGGGATTAGACAGATG+AGG | 0.697642 | 5_3:-50491884 | None:intergenic |
AAATTAGTAGTATTAATTAG+GGG | 0.699771 | 5_3:-50496425 | None:intergenic |
CACCATTGCAGATTACACGG+AGG | 0.732506 | 5_3:+50495984 | Msa0816270:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTATATTTCATAATCAAT+TGG | + | chr5_3:50489794-50489813 | Msa0816270:intron | 10.0% |
!!! | TACATTTATATTTTGTAATT+TGG | + | chr5_3:50490136-50490155 | Msa0816270:intron | 10.0% |
!!! | TTTTTTTTTTAATTACAAAG+AGG | + | chr5_3:50491576-50491595 | Msa0816270:intron | 10.0% |
!!! | TTTTTTTTTAATTACAAAGA+GGG | + | chr5_3:50491577-50491596 | Msa0816270:intron | 10.0% |
!! | TTATATAAAATTGAACTTAA+GGG | - | chr5_3:50491615-50491634 | None:intergenic | 10.0% |
!! | ATTATATAAAATTGAACTTA+AGG | - | chr5_3:50491616-50491635 | None:intergenic | 10.0% |
!! | AAAGATAAAAAATTTCTATT+TGG | + | chr5_3:50492692-50492711 | Msa0816270:intron | 10.0% |
!! | GTTTCTAATTTATATAAAAT+TGG | + | chr5_3:50495718-50495737 | Msa0816270:intron | 10.0% |
!!! | TATATTTTTTATTTTTCTGT+TGG | + | chr5_3:50496261-50496280 | Msa0816270:three_prime_UTR | 10.0% |
!!! | ATATTTTTTATTTTTCTGTT+GGG | + | chr5_3:50496262-50496281 | Msa0816270:three_prime_UTR | 10.0% |
!! | AATAATAACTTACAATACTA+CGG | - | chr5_3:50488317-50488336 | None:intergenic | 15.0% |
!!! | ATTTGTTAGTTTGATTTTAT+TGG | + | chr5_3:50488409-50488428 | Msa0816270:intron | 15.0% |
!! | AACTAAAAATACAAATTCTT+GGG | - | chr5_3:50488607-50488626 | None:intergenic | 15.0% |
!!! | TGCATTTATATTTTGTAATT+TGG | + | chr5_3:50490048-50490067 | Msa0816270:intron | 15.0% |
!!! | TTATTTTCAAAGATTTGTTT+AGG | - | chr5_3:50490818-50490837 | None:intergenic | 15.0% |
!! | AAAGATTGATTAAAAAATAC+AGG | - | chr5_3:50491425-50491444 | None:intergenic | 15.0% |
!! | TAAAAAAAAAATGAACTCAA+GGG | - | chr5_3:50491567-50491586 | None:intergenic | 15.0% |
!! | TTAAAAAAAAAATGAACTCA+AGG | - | chr5_3:50491568-50491587 | None:intergenic | 15.0% |
!!! | AGAGTTTTTCATAAAATTTT+GGG | - | chr5_3:50492093-50492112 | None:intergenic | 15.0% |
!!! | TAGAGTTTTTCATAAAATTT+TGG | - | chr5_3:50492094-50492113 | None:intergenic | 15.0% |
!! | AAAAATTTGCAATATAATTC+TGG | + | chr5_3:50494181-50494200 | Msa0816270:intron | 15.0% |
!! | TGTAAATTATATCTAAATGT+TGG | - | chr5_3:50494541-50494560 | None:intergenic | 15.0% |
!!! | ATATATGGTAAATTTTGTAA+GGG | + | chr5_3:50496347-50496366 | Msa0816270:three_prime_UTR | 15.0% |
!! | AAATTAGTAGTATTAATTAG+GGG | - | chr5_3:50496428-50496447 | None:intergenic | 15.0% |
!! | CAAATTAGTAGTATTAATTA+GGG | - | chr5_3:50496429-50496448 | None:intergenic | 15.0% |
!! | ACAAATTAGTAGTATTAATT+AGG | - | chr5_3:50496430-50496449 | None:intergenic | 15.0% |
!!! | ATTTCAAGTATATTGATGTT+CGG | + | chr5_3:50488494-50488513 | Msa0816270:CDS | 20.0% |
!! | GAACTAAAAATACAAATTCT+TGG | - | chr5_3:50488608-50488627 | None:intergenic | 20.0% |
!!! | TAAAAAGTGTTGTTAAATAG+AGG | + | chr5_3:50488831-50488850 | Msa0816270:intron | 20.0% |
!! | CACAAAACAAAACTAAAATA+GGG | - | chr5_3:50488959-50488978 | None:intergenic | 20.0% |
!!! | TCTTTTCAATTCCAAATATT+TGG | + | chr5_3:50489195-50489214 | Msa0816270:intron | 20.0% |
!! | AATGAGAATAACCAAATATT+TGG | - | chr5_3:50489209-50489228 | None:intergenic | 20.0% |
!! | CATAAAATATAGAACTCAAA+AGG | - | chr5_3:50489835-50489854 | None:intergenic | 20.0% |
!!! | CATTTTATGATCATTTTCTA+TGG | - | chr5_3:50490170-50490189 | None:intergenic | 20.0% |
!! | AGTTAAAATTTACTAAAGCT+TGG | + | chr5_3:50490487-50490506 | Msa0816270:CDS | 20.0% |
!! | TTTAGTAATATATGACACTA+TGG | + | chr5_3:50490653-50490672 | Msa0816270:intron | 20.0% |
!! | TAAAACAAAAAAGTCAAACT+GGG | - | chr5_3:50491122-50491141 | None:intergenic | 20.0% |
!! | TTAAAACAAAAAAGTCAAAC+TGG | - | chr5_3:50491123-50491142 | None:intergenic | 20.0% |
!! | AAGAAAGAAGAAAAGATAAA+TGG | - | chr5_3:50491284-50491303 | None:intergenic | 20.0% |
!!! | TTTTAATCAATCTTTATAGC+AGG | + | chr5_3:50491430-50491449 | Msa0816270:intron | 20.0% |
!! | ATAAAATGAATCTAGTCAAA+GGG | - | chr5_3:50491684-50491703 | None:intergenic | 20.0% |
!!! | AAAGTGAATTCTATTTGTTT+TGG | + | chr5_3:50491717-50491736 | Msa0816270:intron | 20.0% |
!!! | AAGTGAATTCTATTTGTTTT+GGG | + | chr5_3:50491718-50491737 | Msa0816270:intron | 20.0% |
!! | TATGTTCTGTTTAATATGAA+TGG | + | chr5_3:50491769-50491788 | Msa0816270:intron | 20.0% |
!! | AAGAAAATGCAAAATCAAAA+GGG | - | chr5_3:50491825-50491844 | None:intergenic | 20.0% |
!! | AAAGAAAATGCAAAATCAAA+AGG | - | chr5_3:50491826-50491845 | None:intergenic | 20.0% |
!!! | TTTGCATTTTCTTTTTTACT+AGG | + | chr5_3:50491832-50491851 | Msa0816270:intron | 20.0% |
!!! | CAGAAATTGACATTTTATTA+TGG | + | chr5_3:50491929-50491948 | Msa0816270:intron | 20.0% |
!! | ATGCTGCAAAATTAATTTAT+CGG | + | chr5_3:50492616-50492635 | Msa0816270:intron | 20.0% |
!!! | AGCATATATCATTTTCTAAA+TGG | - | chr5_3:50493506-50493525 | None:intergenic | 20.0% |
!!! | ACTTTTCTATTCATCTTATT+CGG | + | chr5_3:50493539-50493558 | Msa0816270:intron | 20.0% |
!!! | TTATATTGCAAATTTTTGTC+TGG | - | chr5_3:50494178-50494197 | None:intergenic | 20.0% |
!!! | GAAAGATTTGTTAACTTAAA+TGG | + | chr5_3:50494358-50494377 | Msa0816270:intron | 20.0% |
!! | ACAATACATGTAAAACTAAA+TGG | - | chr5_3:50495070-50495089 | None:intergenic | 20.0% |
!! | CATGTATTGTTAATGTTATA+TGG | + | chr5_3:50495080-50495099 | Msa0816270:intron | 20.0% |
!! | AAGATTAAATACAACAATGA+AGG | - | chr5_3:50495423-50495442 | None:intergenic | 20.0% |
!!! | GTAAAAGCATATAATGTTTA+AGG | - | chr5_3:50495469-50495488 | None:intergenic | 20.0% |
!! | ATTCTCTTATTATGCAAATT+TGG | - | chr5_3:50495661-50495680 | None:intergenic | 20.0% |
!! | AAATTTGCATAATAAGAGAA+TGG | + | chr5_3:50495660-50495679 | Msa0816270:intron | 20.0% |
!!! | CATTTTTGTATTTTGTATAC+TGG | + | chr5_3:50495831-50495850 | Msa0816270:intron | 20.0% |
!!! | AATTTTATTTTTGTCCTACA+AGG | - | chr5_3:50495872-50495891 | None:intergenic | 20.0% |
!!! | AACAAACATTTTAATTTCAC+AGG | - | chr5_3:50496223-50496242 | None:intergenic | 20.0% |
!! | GTGAAATTAAAATGTTTGTT+TGG | + | chr5_3:50496223-50496242 | Msa0816270:three_prime_UTR | 20.0% |
!!! | GATATATGGTAAATTTTGTA+AGG | + | chr5_3:50496346-50496365 | Msa0816270:three_prime_UTR | 20.0% |
! | GCACAAAACAAAACTAAAAT+AGG | - | chr5_3:50488960-50488979 | None:intergenic | 25.0% |
! | TCATCTTCTTCTCTTTATAA+AGG | - | chr5_3:50489357-50489376 | None:intergenic | 25.0% |
!! | ATACATCTAGTTTCAAAACT+AGG | - | chr5_3:50489569-50489588 | None:intergenic | 25.0% |
! | ATACATCTGATTTAGAAATG+TGG | + | chr5_3:50489718-50489737 | Msa0816270:CDS | 25.0% |
! | TACATTATTGTTACGTTTCT+TGG | - | chr5_3:50490233-50490252 | None:intergenic | 25.0% |
! | GAAAATTACAATGTAATCCA+AGG | - | chr5_3:50490319-50490338 | None:intergenic | 25.0% |
! | TATGCATAACAATGATGTAA+TGG | - | chr5_3:50490430-50490449 | None:intergenic | 25.0% |
!! | ATGTGTTTGAAATTTCAGTA+TGG | + | chr5_3:50490570-50490589 | Msa0816270:intron | 25.0% |
! | CATCAATTTCCAGAATATAA+TGG | - | chr5_3:50490599-50490618 | None:intergenic | 25.0% |
!!! | TTTACAGATATGCTATTTCT+AGG | + | chr5_3:50490688-50490707 | Msa0816270:intron | 25.0% |
! | TGTATATCTAAGTGTTTGTT+TGG | + | chr5_3:50490728-50490747 | Msa0816270:intron | 25.0% |
! | TAGGAAATGAAATGAAAACA+AGG | - | chr5_3:50490799-50490818 | None:intergenic | 25.0% |
!! | AGAGTCTTGATATAACATTT+TGG | + | chr5_3:50490970-50490989 | Msa0816270:intron | 25.0% |
! | AAAACAAAAAAGTCAAACTG+GGG | - | chr5_3:50491121-50491140 | None:intergenic | 25.0% |
!! | TATAATGAAGTATCTAGAGA+GGG | - | chr5_3:50491349-50491368 | None:intergenic | 25.0% |
! | TAAAATTGAACTTAAGGGAA+GGG | - | chr5_3:50491610-50491629 | None:intergenic | 25.0% |
! | ATAAAATTGAACTTAAGGGA+AGG | - | chr5_3:50491611-50491630 | None:intergenic | 25.0% |
! | CATAAAATGAATCTAGTCAA+AGG | - | chr5_3:50491685-50491704 | None:intergenic | 25.0% |
!!! | AGTGAATTCTATTTGTTTTG+GGG | + | chr5_3:50491719-50491738 | Msa0816270:intron | 25.0% |
! | AGAAAATGCAAAATCAAAAG+GGG | - | chr5_3:50491824-50491843 | None:intergenic | 25.0% |
! | ATACATGTAAAACTAACCAA+TGG | + | chr5_3:50492196-50492215 | Msa0816270:intron | 25.0% |
! | TACATGTAAAACTAACCAAT+GGG | + | chr5_3:50492197-50492216 | Msa0816270:intron | 25.0% |
! | TAAATGCAACATTAATATGC+CGG | + | chr5_3:50492295-50492314 | Msa0816270:intron | 25.0% |
!! | TTAAATCGTTTTATCCAAAC+CGG | - | chr5_3:50492317-50492336 | None:intergenic | 25.0% |
!!! | TTTTTTTTGCAACAATGATC+AGG | + | chr5_3:50492472-50492491 | Msa0816270:intron | 25.0% |
!! | CTAGATAACATTCAATGTTT+TGG | - | chr5_3:50493036-50493055 | None:intergenic | 25.0% |
!!! | CATTAGTAAATTTTGTTTCC+TGG | + | chr5_3:50493383-50493402 | Msa0816270:intron | 25.0% |
! | TACCAAACATAGATACAAAA+TGG | - | chr5_3:50493700-50493719 | None:intergenic | 25.0% |
!!! | TGGTTTTATATAGAACACTT+TGG | + | chr5_3:50493967-50493986 | Msa0816270:intron | 25.0% |
! | GTATCTATGTTTCTCAAATT+AGG | + | chr5_3:50494050-50494069 | Msa0816270:intron | 25.0% |
! | TTCTCAAATTAGGTTTCTAT+TGG | + | chr5_3:50494060-50494079 | Msa0816270:intron | 25.0% |
! | TGCAATTGAAAACTAAATAG+AGG | + | chr5_3:50494565-50494584 | Msa0816270:intron | 25.0% |
! | TTATTATCCCTAATCAAGTT+GGG | + | chr5_3:50494594-50494613 | Msa0816270:intron | 25.0% |
!!! | AATTTCAAAATTTGTTGCTC+TGG | + | chr5_3:50494634-50494653 | Msa0816270:intron | 25.0% |
! | CTAATTTCTGATATTTGAAC+AGG | + | chr5_3:50494722-50494741 | Msa0816270:intron | 25.0% |
! | TTGTTAATGTTATATGGTCA+AGG | + | chr5_3:50495086-50495105 | Msa0816270:intron | 25.0% |
! | AACAAATTAAGCATGACATT+AGG | + | chr5_3:50495192-50495211 | Msa0816270:intron | 25.0% |
! | TAAATACAACAATGAAGGAA+AGG | - | chr5_3:50495418-50495437 | None:intergenic | 25.0% |
! | AAAACAAGCGAAGTTAATAT+TGG | + | chr5_3:50495541-50495560 | Msa0816270:CDS | 25.0% |
! | ATAAAGGACGAAAAACAAAA+TGG | - | chr5_3:50495618-50495637 | None:intergenic | 25.0% |
! | TATAAGGCACATTACTATAA+AGG | - | chr5_3:50495634-50495653 | None:intergenic | 25.0% |
!! | ATGCAAATTTGGTGAATATA+AGG | - | chr5_3:50495650-50495669 | None:intergenic | 25.0% |
! | CATTATTTATGTCAAATGTG+TGG | - | chr5_3:50495768-50495787 | None:intergenic | 25.0% |
!! | TTGAAGATCAAAATTTTCAC+CGG | - | chr5_3:50496306-50496325 | None:intergenic | 25.0% |
!! | TATTAATTAGGGGTATGTTT+AGG | - | chr5_3:50496418-50496437 | None:intergenic | 25.0% |
AGCTTAAGAAAAAAACACCA+TGG | + | chr5_3:50487837-50487856 | Msa0816270:exon | 30.0% | |
GTAAATGAATTCGGATTGAT+CGG | - | chr5_3:50488124-50488143 | None:intergenic | 30.0% | |
TGAATGCGATGAAACTATTA+AGG | + | chr5_3:50488209-50488228 | Msa0816270:CDS | 30.0% | |
!! | TACTTTGATGGAGTTTGTTA+AGG | + | chr5_3:50488245-50488264 | Msa0816270:CDS | 30.0% |
TCGTCAATGTTGTTAAATAG+CGG | + | chr5_3:50488724-50488743 | Msa0816270:intron | 30.0% | |
CAGTACTAAATAGCATATCA+CGG | - | chr5_3:50488811-50488830 | None:intergenic | 30.0% | |
! | AATTTCTTGTGAGCTTTTCT+AGG | - | chr5_3:50489076-50489095 | None:intergenic | 30.0% |
AGAAAAGCTCACAAGAAATT+TGG | + | chr5_3:50489076-50489095 | Msa0816270:CDS | 30.0% | |
AGATTAAGAAAAGCAAGCTA+AGG | - | chr5_3:50489131-50489150 | None:intergenic | 30.0% | |
! | TGAGCTTAATTGACTTTCAT+TGG | - | chr5_3:50489287-50489306 | None:intergenic | 30.0% |
ATGAAAGTCAATTAAGCTCA+AGG | + | chr5_3:50489287-50489306 | Msa0816270:CDS | 30.0% | |
GCAAGAATAAAATTAACCAC+TGG | - | chr5_3:50489328-50489347 | None:intergenic | 30.0% | |
! | AAATCATTTAAGACCAGCTA+TGG | - | chr5_3:50489380-50489399 | None:intergenic | 30.0% |
! | ACATCTCTAATTTTTCTGCT+AGG | + | chr5_3:50489533-50489552 | Msa0816270:intron | 30.0% |
ATATGGTGTAGTACATATTG+TGG | - | chr5_3:50489668-50489687 | None:intergenic | 30.0% | |
!!! | TATCGTCTGATTTTTCAAGA+GGG | - | chr5_3:50489701-50489720 | None:intergenic | 30.0% |
!! | GATCAAGTAAGAAGTATCTT+TGG | + | chr5_3:50489923-50489942 | Msa0816270:intron | 30.0% |
TTTAAGTGGGATCAGTTATA+TGG | - | chr5_3:50489984-50490003 | None:intergenic | 30.0% | |
! | AACCAAAAGCTTGTTTAAGT+GGG | - | chr5_3:50489997-50490016 | None:intergenic | 30.0% |
! | TAACCAAAAGCTTGTTTAAG+TGG | - | chr5_3:50489998-50490017 | None:intergenic | 30.0% |
!! | TGGTTATTCTTGTTGTTCTA+AGG | + | chr5_3:50490012-50490031 | Msa0816270:intron | 30.0% |
!! | CTTGTTGTTCTAAGGAAAAA+TGG | + | chr5_3:50490020-50490039 | Msa0816270:intron | 30.0% |
AACCAAAAGCCTATTTAAGT+GGG | - | chr5_3:50490085-50490104 | None:intergenic | 30.0% | |
TAACCAAAAGCCTATTTAAG+TGG | - | chr5_3:50490086-50490105 | None:intergenic | 30.0% | |
!! | TGGTTATTCTTGTTGTTCTA+AGG | + | chr5_3:50490012-50490031 | Msa0816270:intron | 30.0% |
TAAAATGCTTTCTGTAGATG+TGG | + | chr5_3:50490183-50490202 | Msa0816270:intron | 30.0% | |
ATAAAAGGTCCTCATTAATG+GGG | - | chr5_3:50490296-50490315 | None:intergenic | 30.0% | |
GATAAAAGGTCCTCATTAAT+GGG | - | chr5_3:50490297-50490316 | None:intergenic | 30.0% | |
CAATGTAATCCAAGGATAAA+AGG | - | chr5_3:50490311-50490330 | None:intergenic | 30.0% | |
TACATCATTGTTATGCATAC+AGG | + | chr5_3:50490431-50490450 | Msa0816270:intron | 30.0% | |
ATCTAAGTGTTTGTTTGGTT+TGG | + | chr5_3:50490733-50490752 | Msa0816270:intron | 30.0% | |
! | TCTAAGTGTTTGTTTGGTTT+GGG | + | chr5_3:50490734-50490753 | Msa0816270:intron | 30.0% |
GAAATGAAATGAAAACAAGG+TGG | - | chr5_3:50490796-50490815 | None:intergenic | 30.0% | |
GAAATCAAGTGAAATCAATG+TGG | + | chr5_3:50490838-50490857 | Msa0816270:intron | 30.0% | |
GTGTAAACATGAATGAATGT+AGG | + | chr5_3:50490878-50490897 | Msa0816270:intron | 30.0% | |
TGTACATACGTGTATATATG+TGG | + | chr5_3:50490936-50490955 | Msa0816270:intron | 30.0% | |
CAAAAAGATATCCACATTTC+AGG | - | chr5_3:50491003-50491022 | None:intergenic | 30.0% | |
! | AAATACATGATGGGGATTTA+CGG | - | chr5_3:50491247-50491266 | None:intergenic | 30.0% |
CTTAGACAAAATACATGATG+GGG | - | chr5_3:50491255-50491274 | None:intergenic | 30.0% | |
CCTTAGACAAAATACATGAT+GGG | - | chr5_3:50491256-50491275 | None:intergenic | 30.0% | |
TCCTTAGACAAAATACATGA+TGG | - | chr5_3:50491257-50491276 | None:intergenic | 30.0% | |
! | GTATAATGAAGTATCTAGAG+AGG | - | chr5_3:50491350-50491369 | None:intergenic | 30.0% |
!! | ATCAATTTGGTGTTATGCAA+TGG | - | chr5_3:50491479-50491498 | None:intergenic | 30.0% |
!!! | GTGAATTCTATTTGTTTTGG+GGG | + | chr5_3:50491720-50491739 | Msa0816270:intron | 30.0% |
AAAATGCAAAATCAAAAGGG+GGG | - | chr5_3:50491822-50491841 | None:intergenic | 30.0% | |
GAAAATGCAAAATCAAAAGG+GGG | - | chr5_3:50491823-50491842 | None:intergenic | 30.0% | |
ATTAGTTCCATCTATCTTCA+TGG | + | chr5_3:50492120-50492139 | Msa0816270:CDS | 30.0% | |
!! | GTCATTTTATAAGCTTTACC+TGG | - | chr5_3:50492168-50492187 | None:intergenic | 30.0% |
ACATGTAAAACTAACCAATG+GGG | + | chr5_3:50492198-50492217 | Msa0816270:intron | 30.0% | |
ATAAAACGATTTAAGCATGC+TGG | + | chr5_3:50492323-50492342 | Msa0816270:intron | 30.0% | |
ACAACATCGTTAATATGCAA+CGG | + | chr5_3:50492435-50492454 | Msa0816270:intron | 30.0% | |
!!! | GAAAGTGTCATGTTTTTTGT+CGG | + | chr5_3:50492658-50492677 | Msa0816270:intron | 30.0% |
!!! | AAAGTGTCATGTTTTTTGTC+GGG | + | chr5_3:50492659-50492678 | Msa0816270:intron | 30.0% |
! | CTTTTTCTGTATAGCAATAG+AGG | - | chr5_3:50492751-50492770 | None:intergenic | 30.0% |
! | GAAAAGAGAGGTATAATATG+GGG | - | chr5_3:50492945-50492964 | None:intergenic | 30.0% |
! | CGAAAAGAGAGGTATAATAT+GGG | - | chr5_3:50492946-50492965 | None:intergenic | 30.0% |
! | TCGAAAAGAGAGGTATAATA+TGG | - | chr5_3:50492947-50492966 | None:intergenic | 30.0% |
! | CTAATTCACTATTTCTTTGG+GGG | - | chr5_3:50492984-50493003 | None:intergenic | 30.0% |
! | CCTAATTCACTATTTCTTTG+GGG | - | chr5_3:50492985-50493004 | None:intergenic | 30.0% |
! | GCCTAATTCACTATTTCTTT+GGG | - | chr5_3:50492986-50493005 | None:intergenic | 30.0% |
! | AGCCTAATTCACTATTTCTT+TGG | - | chr5_3:50492987-50493006 | None:intergenic | 30.0% |
TAATTGAGTGGTTTCTGTAA+TGG | + | chr5_3:50493006-50493025 | Msa0816270:intron | 30.0% | |
! | GTTATCTAGTGATGATGAAA+AGG | + | chr5_3:50493047-50493066 | Msa0816270:intron | 30.0% |
TGCATATTGTCAGAAAATGA+AGG | - | chr5_3:50493132-50493151 | None:intergenic | 30.0% | |
ACTCAATTTCTTTGCAAATG+AGG | - | chr5_3:50493219-50493238 | None:intergenic | 30.0% | |
CATTTGCAAAGAAATTGAGT+AGG | + | chr5_3:50493219-50493238 | Msa0816270:CDS | 30.0% | |
TTTCCTGGATTACTATATCT+TGG | + | chr5_3:50493398-50493417 | Msa0816270:intron | 30.0% | |
AAATGATATATGCTGTGTTC+AGG | + | chr5_3:50493512-50493531 | Msa0816270:intron | 30.0% | |
ACATTTGCATGTTTGTGATA+TGG | + | chr5_3:50493656-50493675 | Msa0816270:intron | 30.0% | |
!!! | TGCCATTTTGTATCTATGTT+TGG | + | chr5_3:50493695-50493714 | Msa0816270:intron | 30.0% |
! | TCTACCATCTTTTCTACTAT+AGG | - | chr5_3:50493777-50493796 | None:intergenic | 30.0% |
AAGATGGTAGAAACTAGATT+TGG | + | chr5_3:50493786-50493805 | Msa0816270:intron | 30.0% | |
AGATGGTAGAAACTAGATTT+GGG | + | chr5_3:50493787-50493806 | Msa0816270:intron | 30.0% | |
TATAGGAGAAGCTATTAAGA+AGG | + | chr5_3:50493914-50493933 | Msa0816270:intron | 30.0% | |
TTGCAATATAATTCTGGCAT+AGG | + | chr5_3:50494187-50494206 | Msa0816270:intron | 30.0% | |
TACTATGATAAGAGAAATGC+AGG | + | chr5_3:50494327-50494346 | Msa0816270:intron | 30.0% | |
TGTCTTTCCATATAAGAGAT+CGG | - | chr5_3:50494402-50494421 | None:intergenic | 30.0% | |
ATATTGTCTGATGTCACTAT+TGG | + | chr5_3:50494473-50494492 | Msa0816270:intron | 30.0% | |
GTTATTATCCCTAATCAAGT+TGG | + | chr5_3:50494593-50494612 | Msa0816270:intron | 30.0% | |
AAAAACACCCAACTTGATTA+GGG | - | chr5_3:50494604-50494623 | None:intergenic | 30.0% | |
TCTCCAATTAAACAGAAAGA+AGG | - | chr5_3:50494701-50494720 | None:intergenic | 30.0% | |
CAGATTCCTCAATGTTAAAA+TGG | - | chr5_3:50494851-50494870 | None:intergenic | 30.0% | |
TAGGAAAAATAACACACTTC+AGG | - | chr5_3:50494935-50494954 | None:intergenic | 30.0% | |
ATATACATACATATTGCGTG+AGG | + | chr5_3:50495025-50495044 | Msa0816270:intron | 30.0% | |
CGTCTTATAGCTTACAATAT+TGG | + | chr5_3:50495225-50495244 | Msa0816270:intron | 30.0% | |
CTTCATCAGCAAAACAAATA+AGG | - | chr5_3:50495286-50495305 | None:intergenic | 30.0% | |
! | ATGCTTTTACTTGTGCTTTT+AGG | + | chr5_3:50495479-50495498 | Msa0816270:intron | 30.0% |
!! | AATATTGGTGATTTTAGTGC+TGG | + | chr5_3:50495556-50495575 | Msa0816270:CDS | 30.0% |
! | CAAATAACTTTTCTCCTTGT+AGG | + | chr5_3:50495855-50495874 | Msa0816270:intron | 30.0% |
! | TTTTCAGAGAATGATTTTGC+TGG | + | chr5_3:50496055-50496074 | Msa0816270:CDS | 30.0% |
ATCATCGACAATAATGAGAA+CGG | + | chr5_3:50496112-50496131 | Msa0816270:CDS | 30.0% | |
TTTCTGTTGGGAAAGAAAAA+AGG | + | chr5_3:50496274-50496293 | Msa0816270:three_prime_UTR | 30.0% | |
! | TGAAGATCAAAATTTTCACC+GGG | - | chr5_3:50496305-50496324 | None:intergenic | 30.0% |
! | TTCTTCGTTTTCTTCATTGC+AGG | - | chr5_3:50487865-50487884 | None:intergenic | 35.0% |
ATCACTGAAATCAAAACCCT+AGG | + | chr5_3:50487916-50487935 | Msa0816270:CDS | 35.0% | |
! | ATCACTTATCGATTGTCTTG+TGG | + | chr5_3:50488182-50488201 | Msa0816270:CDS | 35.0% |
AGTTGTGCTTGATACTTTGA+TGG | + | chr5_3:50488233-50488252 | Msa0816270:CDS | 35.0% | |
!! | GAGTTTGTTAAGGTTGCTAA+TGG | + | chr5_3:50488255-50488274 | Msa0816270:CDS | 35.0% |
TTTGTTAAGGTTGCTAATGG+TGG | + | chr5_3:50488258-50488277 | Msa0816270:CDS | 35.0% | |
CTAGCGTCTAGAAAAATCAA+AGG | - | chr5_3:50488536-50488555 | None:intergenic | 35.0% | |
!!! | TTTTTTGCTTAGCGCCTTTA+TGG | + | chr5_3:50488673-50488692 | Msa0816270:intron | 35.0% |
TAAGAACTTCCCTTCCATAA+AGG | - | chr5_3:50488690-50488709 | None:intergenic | 35.0% | |
TTTATGGAAGGGAAGTTCTT+AGG | + | chr5_3:50488689-50488708 | Msa0816270:intron | 35.0% | |
TTAGTAATGCTATAGCGTAG+CGG | + | chr5_3:50488754-50488773 | Msa0816270:intron | 35.0% | |
AAATAGCATATCACGGATAG+CGG | - | chr5_3:50488804-50488823 | None:intergenic | 35.0% | |
AAAGCTCACAAGAAATTTGG+AGG | + | chr5_3:50489079-50489098 | Msa0816270:CDS | 35.0% | |
AAGCTCACAAGAAATTTGGA+GGG | + | chr5_3:50489080-50489099 | Msa0816270:CDS | 35.0% | |
!!! | ATCGTCTGATTTTTCAAGAG+GGG | - | chr5_3:50489700-50489719 | None:intergenic | 35.0% |
!!! | GTATCGTCTGATTTTTCAAG+AGG | - | chr5_3:50489702-50489721 | None:intergenic | 35.0% |
TTAGAAATGTGGAGTGTATC+AGG | + | chr5_3:50489729-50489748 | Msa0816270:CDS | 35.0% | |
! | GCTATAAAGCTGTCACTTAT+TGG | - | chr5_3:50489951-50489970 | None:intergenic | 35.0% |
! | ATCCCACTTAAACAAGCTTT+TGG | + | chr5_3:50489992-50490011 | Msa0816270:intron | 35.0% |
ATAGCTGATCCCACTTAAAT+AGG | + | chr5_3:50490073-50490092 | Msa0816270:intron | 35.0% | |
! | ATCCCACTTAAATAGGCTTT+TGG | + | chr5_3:50490080-50490099 | Msa0816270:intron | 35.0% |
TCATTAATGGGGAAAAAAGG+GGG | - | chr5_3:50490285-50490304 | None:intergenic | 35.0% | |
CTCATTAATGGGGAAAAAAG+GGG | - | chr5_3:50490286-50490305 | None:intergenic | 35.0% | |
CCTCATTAATGGGGAAAAAA+GGG | - | chr5_3:50490287-50490306 | None:intergenic | 35.0% | |
TCCTCATTAATGGGGAAAAA+AGG | - | chr5_3:50490288-50490307 | None:intergenic | 35.0% | |
GGATAAAAGGTCCTCATTAA+TGG | - | chr5_3:50490298-50490317 | None:intergenic | 35.0% | |
! | TAATGAGGACCTTTTATCCT+TGG | + | chr5_3:50490299-50490318 | Msa0816270:intron | 35.0% |
GTATGGTTGCCATTATATTC+TGG | + | chr5_3:50490587-50490606 | Msa0816270:intron | 35.0% | |
TATGTACAGTTGTATTCAGG+TGG | - | chr5_3:50490924-50490943 | None:intergenic | 35.0% | |
ACGTATGTACAGTTGTATTC+AGG | - | chr5_3:50490927-50490946 | None:intergenic | 35.0% | |
GTCAAAGTCAAATCCATTGT+TGG | + | chr5_3:50491056-50491075 | Msa0816270:intron | 35.0% | |
! | ATCCATTGTTGGTCTATAGT+AGG | + | chr5_3:50491067-50491086 | Msa0816270:intron | 35.0% |
TTCCTACTATAGACCAACAA+TGG | - | chr5_3:50491072-50491091 | None:intergenic | 35.0% | |
TAACCAAACATTTCTCCACT+TGG | + | chr5_3:50491193-50491212 | Msa0816270:intron | 35.0% | |
! | CCCATCATGTATTTTGTCTA+AGG | + | chr5_3:50491253-50491272 | Msa0816270:intron | 35.0% |
! | ATCTAGAGAGGGTTTGTTTA+AGG | - | chr5_3:50491338-50491357 | None:intergenic | 35.0% |
CACATCGCAGAAAATCAATT+TGG | - | chr5_3:50491492-50491511 | None:intergenic | 35.0% | |
TCAAGGGATACAATGAATCT+GGG | - | chr5_3:50491551-50491570 | None:intergenic | 35.0% | |
! | AGGGTTCTTTGTTAGTCTAT+TGG | - | chr5_3:50491665-50491684 | None:intergenic | 35.0% |
AAATGCAAAATCAAAAGGGG+GGG | - | chr5_3:50491821-50491840 | None:intergenic | 35.0% | |
TGTCTAATCCCATCATGTTA+TGG | + | chr5_3:50491891-50491910 | Msa0816270:intron | 35.0% | |
GGTGTTTACCATAACATGAT+GGG | - | chr5_3:50491902-50491921 | None:intergenic | 35.0% | |
AGGTGTTTACCATAACATGA+TGG | - | chr5_3:50491903-50491922 | None:intergenic | 35.0% | |
AATGTCAATTTCTGTAGCAC+AGG | - | chr5_3:50491923-50491942 | None:intergenic | 35.0% | |
! | TGTTTTGCCATGAAGATAGA+TGG | - | chr5_3:50492130-50492149 | None:intergenic | 35.0% |
! | TTTTGCTTGATATTCCCCAT+TGG | - | chr5_3:50492215-50492234 | None:intergenic | 35.0% |
TCCAACAATGCAACAAGAAT+AGG | + | chr5_3:50492373-50492392 | Msa0816270:intron | 35.0% | |
TCCTATTCTTGTTGCATTGT+TGG | - | chr5_3:50492377-50492396 | None:intergenic | 35.0% | |
! | TTATTCTAGTTGGACCTGAT+TGG | - | chr5_3:50492514-50492533 | None:intergenic | 35.0% |
CACAGCAGATTTATTCTAGT+TGG | - | chr5_3:50492524-50492543 | None:intergenic | 35.0% | |
!!! | AAGTGTCATGTTTTTTGTCG+GGG | + | chr5_3:50492660-50492679 | Msa0816270:intron | 35.0% |
ATTTCTATTTGGCGCATAGA+TGG | + | chr5_3:50492703-50492722 | Msa0816270:intron | 35.0% | |
TTATACCTCTCTTTGCTAAG+TGG | + | chr5_3:50492777-50492796 | Msa0816270:intron | 35.0% | |
TAACCGAGTAGTTTCTGTAA+TGG | + | chr5_3:50492833-50492852 | Msa0816270:intron | 35.0% | |
AACCGAGTAGTTTCTGTAAT+GGG | + | chr5_3:50492834-50492853 | Msa0816270:intron | 35.0% | |
TTCCCATTACAGAAACTACT+CGG | - | chr5_3:50492839-50492858 | None:intergenic | 35.0% | |
! | AACCAAAGCCTTGTATGTTA+TGG | + | chr5_3:50492859-50492878 | Msa0816270:intron | 35.0% |
TCATCACTCCATAACATACA+AGG | - | chr5_3:50492870-50492889 | None:intergenic | 35.0% | |
! | TTATACCTCTCTTTTCGAAG+TGG | + | chr5_3:50492949-50492968 | Msa0816270:intron | 35.0% |
CCCCAAAGAAATAGTGAATT+AGG | + | chr5_3:50492982-50493001 | Msa0816270:intron | 35.0% | |
AGTGAATTAGGCTAATTGAG+TGG | + | chr5_3:50492994-50493013 | Msa0816270:intron | 35.0% | |
GAAACAAGACTATCTTTACC+CGG | - | chr5_3:50493340-50493359 | None:intergenic | 35.0% | |
TCTCCAAGATATAGTAATCC+AGG | - | chr5_3:50493404-50493423 | None:intergenic | 35.0% | |
ATTACAACATTAGCGAGAGT+TGG | + | chr5_3:50493744-50493763 | Msa0816270:intron | 35.0% | |
TTACAACATTAGCGAGAGTT+GGG | + | chr5_3:50493745-50493764 | Msa0816270:intron | 35.0% | |
AGCACCTATAGTAGAAAAGA+TGG | + | chr5_3:50493770-50493789 | Msa0816270:intron | 35.0% | |
AAACTAGATTTGGGTGGTTT+GGG | + | chr5_3:50493796-50493815 | Msa0816270:intron | 35.0% | |
GGAAGACCTAGAAAAACTAT+AGG | + | chr5_3:50493897-50493916 | Msa0816270:intron | 35.0% | |
! | GCTTCTCCTATAGTTTTTCT+AGG | - | chr5_3:50493906-50493925 | None:intergenic | 35.0% |
GGATCTAGAGATTAATGAGT+TGG | + | chr5_3:50493935-50493954 | Msa0816270:intron | 35.0% | |
! | TAATGAGTTGGAGAAAGACA+TGG | + | chr5_3:50493947-50493966 | Msa0816270:intron | 35.0% |
AAACTCCACTTATTGGGTTA+AGG | + | chr5_3:50494010-50494029 | Msa0816270:intron | 35.0% | |
CAATATAATTCTGGCATAGG+AGG | + | chr5_3:50494190-50494209 | Msa0816270:intron | 35.0% | |
AGTGACATCAGACAATATGA+CGG | - | chr5_3:50494471-50494490 | None:intergenic | 35.0% | |
TGTTGGATTAAGCAAGATGT+TGG | - | chr5_3:50494524-50494543 | None:intergenic | 35.0% | |
CAAAAACACCCAACTTGATT+AGG | - | chr5_3:50494605-50494624 | None:intergenic | 35.0% | |
CCAATTAAACAGAAAGAAGG+CGG | - | chr5_3:50494698-50494717 | None:intergenic | 35.0% | |
AACTTGGATAATGCTCAGAA+TGG | + | chr5_3:50494795-50494814 | Msa0816270:CDS | 35.0% | |
CCTCAATGTTAAAATGGTCA+AGG | - | chr5_3:50494845-50494864 | None:intergenic | 35.0% | |
!! | CCTTGACCATTTTAACATTG+AGG | + | chr5_3:50494842-50494861 | Msa0816270:CDS | 35.0% |
AACACACTTCAGGTCATATT+GGG | - | chr5_3:50494925-50494944 | None:intergenic | 35.0% | |
TAACACACTTCAGGTCATAT+TGG | - | chr5_3:50494926-50494945 | None:intergenic | 35.0% | |
! | TATTTTTCCTAAACCAGACC+AGG | + | chr5_3:50494944-50494963 | Msa0816270:intron | 35.0% |
! | ACAGTTTTCCAATTTTCTCC+TGG | - | chr5_3:50494965-50494984 | None:intergenic | 35.0% |
!!! | ACGGTAAGTGTTTTGATCTT+TGG | + | chr5_3:50495374-50495393 | Msa0816270:intron | 35.0% |
CAATGAAGGAAAGGAAAACA+AGG | - | chr5_3:50495409-50495428 | None:intergenic | 35.0% | |
! | TTTAGGTTTGCTTTGTCTCT+TGG | + | chr5_3:50495496-50495515 | Msa0816270:intron | 35.0% |
! | TTAGGTTTGCTTTGTCTCTT+GGG | + | chr5_3:50495497-50495516 | Msa0816270:intron | 35.0% |
GGTTCTTATGCAACAATACT+TGG | + | chr5_3:50495577-50495596 | Msa0816270:CDS | 35.0% | |
TTATGCAACAATACTTGGAG+CGG | + | chr5_3:50495582-50495601 | Msa0816270:CDS | 35.0% | |
!!! | TGTTTTTAGTCGTTCATCAG+TGG | + | chr5_3:50495788-50495807 | Msa0816270:intron | 35.0% |
ATACTCATCCTTGTATCTTC+TGG | + | chr5_3:50495951-50495970 | Msa0816270:intron | 35.0% | |
!! | GTTGTTTTGTAGAATGCTAG+AGG | - | chr5_3:50496022-50496041 | None:intergenic | 35.0% |
! | ATCATTCTCTGAAAAGAGAG+AGG | - | chr5_3:50496050-50496069 | None:intergenic | 35.0% |
TCATCGACAATAATGAGAAC+GGG | + | chr5_3:50496113-50496132 | Msa0816270:CDS | 35.0% | |
! | TCAATTCGTTGTCTTTTAGC+GGG | - | chr5_3:50496169-50496188 | None:intergenic | 35.0% |
! | CTCAATTCGTTGTCTTTTAG+CGG | - | chr5_3:50496170-50496189 | None:intergenic | 35.0% |
! | GAAGATCAAAATTTTCACCG+GGG | - | chr5_3:50496304-50496323 | None:intergenic | 35.0% |
CTGCAGATACTTGAGATATA+TGG | + | chr5_3:50496332-50496351 | Msa0816270:three_prime_UTR | 35.0% | |
TTTCTTCATTGCAGGTTCCA+TGG | - | chr5_3:50487857-50487876 | None:intergenic | 40.0% | |
!!! | TCAGTGATGCTGTGTTGTTT+TGG | - | chr5_3:50487904-50487923 | None:intergenic | 40.0% |
CCACGTGAGGTAAATGAATT+CGG | - | chr5_3:50488133-50488152 | None:intergenic | 40.0% | |
! | ACTTATCGATTGTCTTGTGG+CGG | + | chr5_3:50488185-50488204 | Msa0816270:CDS | 40.0% |
CACTATAGCACTGTTGCATA+GGG | + | chr5_3:50488854-50488873 | Msa0816270:intron | 40.0% | |
ACTATAGCACTGTTGCATAG+GGG | + | chr5_3:50488855-50488874 | Msa0816270:intron | 40.0% | |
TCATGAATCGTGTCATATGC+AGG | + | chr5_3:50488995-50489014 | Msa0816270:intron | 40.0% | |
CATGAATCGTGTCATATGCA+GGG | + | chr5_3:50488996-50489015 | Msa0816270:intron | 40.0% | |
TTGGAGGGAAAAGATGTTTC+AGG | + | chr5_3:50489095-50489114 | Msa0816270:CDS | 40.0% | |
CTAGTTTCAAAACTAGGACC+AGG | - | chr5_3:50489563-50489582 | None:intergenic | 40.0% | |
CATATTGTGGATGATGCACT+CGG | - | chr5_3:50489655-50489674 | None:intergenic | 40.0% | |
AAGAGGGGGAATATGTGATA+TGG | - | chr5_3:50489685-50489704 | None:intergenic | 40.0% | |
!!! | TCGTCTGATTTTTCAAGAGG+GGG | - | chr5_3:50489699-50489718 | None:intergenic | 40.0% |
!!! | CCCTTTTTTCCCCATTAATG+AGG | + | chr5_3:50490284-50490303 | Msa0816270:intron | 40.0% |
CTTCATCTTCTTCGCAATTC+TGG | - | chr5_3:50490469-50490488 | None:intergenic | 40.0% | |
AAGCTTGGATTGCGTATCTT+AGG | + | chr5_3:50490502-50490521 | Msa0816270:CDS | 40.0% | |
TTGAACACATCCAATGGAAG+TGG | - | chr5_3:50490531-50490550 | None:intergenic | 40.0% | |
TCCATTGGATGTGTTCAAAG+AGG | + | chr5_3:50490533-50490552 | Msa0816270:CDS | 40.0% | |
ACCTCTTTGAACACATCCAA+TGG | - | chr5_3:50490537-50490556 | None:intergenic | 40.0% | |
! | TTGGTAGTAGTCCTGAAATG+TGG | + | chr5_3:50490989-50491008 | Msa0816270:intron | 40.0% |
! | AATGGATTTGACTTTGACCC+TGG | - | chr5_3:50491054-50491073 | None:intergenic | 40.0% |
AAGGGATACAATGAATCTGG+GGG | - | chr5_3:50491549-50491568 | None:intergenic | 40.0% | |
CAAGGGATACAATGAATCTG+GGG | - | chr5_3:50491550-50491569 | None:intergenic | 40.0% | |
CTCAAGGGATACAATGAATC+TGG | - | chr5_3:50491552-50491571 | None:intergenic | 40.0% | |
! | ATGATGGGATTAGACAGATG+AGG | - | chr5_3:50491887-50491906 | None:intergenic | 40.0% |
TGTGCAGTGATTTCTTGACA+AGG | + | chr5_3:50491987-50492006 | Msa0816270:intron | 40.0% | |
TTGACAAGGTCGTATGATGT+AGG | + | chr5_3:50492001-50492020 | Msa0816270:CDS | 40.0% | |
GCTGGGTCATTAGGATATAA+AGG | - | chr5_3:50492057-50492076 | None:intergenic | 40.0% | |
TATATCCTAATGACCCAGCA+TGG | + | chr5_3:50492058-50492077 | Msa0816270:CDS | 40.0% | |
! | GCAACATTAATATGCCGGTT+TGG | + | chr5_3:50492300-50492319 | Msa0816270:intron | 40.0% |
! | TGATCAGGTCCAATTAGTCT+AGG | + | chr5_3:50492487-50492506 | Msa0816270:intron | 40.0% |
CTGATTGGACCTAGACTAAT+TGG | - | chr5_3:50492499-50492518 | None:intergenic | 40.0% | |
! | CAATTAGTCTAGGTCCAATC+AGG | + | chr5_3:50492497-50492516 | Msa0816270:intron | 40.0% |
ATTTGGCGCATAGATGGATA+TGG | + | chr5_3:50492709-50492728 | Msa0816270:intron | 40.0% | |
ATGGATATGGAATGCGATTG+AGG | + | chr5_3:50492722-50492741 | Msa0816270:intron | 40.0% | |
CTCCATAACATACAAGGCTT+TGG | - | chr5_3:50492864-50492883 | None:intergenic | 40.0% | |
ATTGTCCACTTCGAAAAGAG+AGG | - | chr5_3:50492957-50492976 | None:intergenic | 40.0% | |
GTAATAACCAATGCACCAGA+AGG | - | chr5_3:50493263-50493282 | None:intergenic | 40.0% | |
!! | TGCATTGGTTATTACAGCTC+TGG | + | chr5_3:50493268-50493287 | Msa0816270:CDS | 40.0% |
ACATCCTTCGATCAACTGTT+TGG | + | chr5_3:50493310-50493329 | Msa0816270:CDS | 40.0% | |
ATACGAAGTCAAGAGAACAG+AGG | + | chr5_3:50493438-50493457 | Msa0816270:intron | 40.0% | |
TACAACATTAGCGAGAGTTG+GGG | + | chr5_3:50493746-50493765 | Msa0816270:intron | 40.0% | |
TGGTAGAAACTAGATTTGGG+TGG | + | chr5_3:50493790-50493809 | Msa0816270:intron | 40.0% | |
GAAACTAGATTTGGGTGGTT+TGG | + | chr5_3:50493795-50493814 | Msa0816270:intron | 40.0% | |
GGTAAAGAGAGTAGATCTGA+TGG | + | chr5_3:50493848-50493867 | Msa0816270:intron | 40.0% | |
AAAGAGAGTAGATCTGATGG+AGG | + | chr5_3:50493851-50493870 | Msa0816270:intron | 40.0% | |
AAGAGAGTAGATCTGATGGA+GGG | + | chr5_3:50493852-50493871 | Msa0816270:intron | 40.0% | |
AGGTCAAATCACTAGAGGTA+GGG | + | chr5_3:50493875-50493894 | Msa0816270:intron | 40.0% | |
ATGCAGCAAACTCCACTTAT+TGG | + | chr5_3:50494003-50494022 | Msa0816270:intron | 40.0% | |
TGCAGCAAACTCCACTTATT+GGG | + | chr5_3:50494004-50494023 | Msa0816270:intron | 40.0% | |
!! | TCACTTTGAAACTCAGCTGT+TGG | + | chr5_3:50494134-50494153 | Msa0816270:intron | 40.0% |
GTTGGATTGCAGATTTGTGT+AGG | + | chr5_3:50494152-50494171 | Msa0816270:intron | 40.0% | |
GGAAACATGGAGGATGTAAT+AGG | + | chr5_3:50494211-50494230 | Msa0816270:intron | 40.0% | |
ATGTTGACAAATTGCAGCCA+TGG | - | chr5_3:50494306-50494325 | None:intergenic | 40.0% | |
GATAAGAGAAATGCAGGCAT+TGG | + | chr5_3:50494333-50494352 | Msa0816270:intron | 40.0% | |
CTACTGTCCGATCTCTTATA+TGG | + | chr5_3:50494392-50494411 | Msa0816270:intron | 40.0% | |
!! | ATGTCACTATTGGTTCTGTC+TGG | + | chr5_3:50494483-50494502 | Msa0816270:intron | 40.0% |
!! | TGTCACTATTGGTTCTGTCT+GGG | + | chr5_3:50494484-50494503 | Msa0816270:intron | 40.0% |
CCGCCTTCTTTCTGTTTAAT+TGG | + | chr5_3:50494695-50494714 | Msa0816270:intron | 40.0% | |
GAATCTGATCCTATGAAGTC+AGG | + | chr5_3:50494864-50494883 | Msa0816270:CDS | 40.0% | |
!! | ATTTTCTCCTGGTCTGGTTT+AGG | - | chr5_3:50494954-50494973 | None:intergenic | 40.0% |
AAACCAGACCAGGAGAAAAT+TGG | + | chr5_3:50494954-50494973 | Msa0816270:intron | 40.0% | |
! | TTTCCAATTTTCTCCTGGTC+TGG | - | chr5_3:50494960-50494979 | None:intergenic | 40.0% |
TACATATTGCGTGAGGTAAG+AGG | + | chr5_3:50495032-50495051 | Msa0816270:intron | 40.0% | |
GCAAGCATGCATTCATGTAA+GGG | - | chr5_3:50495140-50495159 | None:intergenic | 40.0% | |
AGCAAGCATGCATTCATGTA+AGG | - | chr5_3:50495141-50495160 | None:intergenic | 40.0% | |
CTGATGAAGATTTCTTGAGC+AGG | + | chr5_3:50495297-50495316 | Msa0816270:intron | 40.0% | |
CGTTCATCAGTGGCTTATTA+AGG | + | chr5_3:50495798-50495817 | Msa0816270:intron | 40.0% | |
TTGCACCATTGCAGATTACA+CGG | + | chr5_3:50495981-50496000 | Msa0816270:intron | 40.0% | |
! | TTCTCTGAAAAGAGAGAGGA+TGG | - | chr5_3:50496046-50496065 | None:intergenic | 40.0% |
! | CAGAGAATGATTTTGCTGGT+TGG | + | chr5_3:50496059-50496078 | Msa0816270:CDS | 40.0% |
CATCGACAATAATGAGAACG+GGG | + | chr5_3:50496114-50496133 | Msa0816270:CDS | 40.0% | |
GAACGGGGCTAAAGATTTAT+TGG | + | chr5_3:50496129-50496148 | Msa0816270:CDS | 40.0% | |
GGCTAAAGATTTATTGGACC+AGG | + | chr5_3:50496135-50496154 | Msa0816270:CDS | 40.0% | |
! | CAATTCGTTGTCTTTTAGCG+GGG | - | chr5_3:50496168-50496187 | None:intergenic | 40.0% |
GGAGAGAAGTTCTTGACCTA+GGG | - | chr5_3:50487935-50487954 | None:intergenic | 45.0% | |
AGGAGAGAAGTTCTTGACCT+AGG | - | chr5_3:50487936-50487955 | None:intergenic | 45.0% | |
AGATGAATGTGAGGAGGAGA+GGG | - | chr5_3:50487981-50488000 | None:intergenic | 45.0% | |
AAGAAGGGGAGATGAATGTG+AGG | - | chr5_3:50487990-50488009 | None:intergenic | 45.0% | |
!! | AGAGAATCGATTCGAGGATG+TGG | - | chr5_3:50488023-50488042 | None:intergenic | 45.0% |
!! | GAAGAGAGAGAATCGATTCG+AGG | - | chr5_3:50488029-50488048 | None:intergenic | 45.0% |
CCGAATTCATTTACCTCACG+TGG | + | chr5_3:50488130-50488149 | Msa0816270:CDS | 45.0% | |
GAAACTCGTCGAACTTCGAA+CGG | - | chr5_3:50488158-50488177 | None:intergenic | 45.0% | |
ATGACAATGTACAGCGTGTG+TGG | + | chr5_3:50488650-50488669 | Msa0816270:intron | 45.0% | |
TTGCTTAGCGCCTTTATGGA+AGG | + | chr5_3:50488677-50488696 | Msa0816270:intron | 45.0% | |
TGCTTAGCGCCTTTATGGAA+GGG | + | chr5_3:50488678-50488697 | Msa0816270:intron | 45.0% | |
GCACTATAGCACTGTTGCAT+AGG | + | chr5_3:50488853-50488872 | Msa0816270:intron | 45.0% | |
CAATCTGCGTTTGACAACAG+TGG | + | chr5_3:50488903-50488922 | Msa0816270:intron | 45.0% | |
! | ACAGTGGTCAGCGTGTTATT+TGG | + | chr5_3:50488919-50488938 | Msa0816270:intron | 45.0% |
GATAAAACTGCAAGCGCAGA+TGG | + | chr5_3:50489259-50489278 | Msa0816270:CDS | 45.0% | |
GTTAGTAAGACTCTAGCCAG+TGG | + | chr5_3:50489309-50489328 | Msa0816270:intron | 45.0% | |
GAGAAGAAGATGACCATAGC+TGG | + | chr5_3:50489364-50489383 | Msa0816270:intron | 45.0% | |
! | ACATCACCTCCTTTTCTGCT+AGG | + | chr5_3:50489506-50489525 | Msa0816270:intron | 45.0% |
GATGTTCTGCCTAGCAGAAA+AGG | - | chr5_3:50489518-50489537 | None:intergenic | 45.0% | |
! | ATTTTTCTGCTAGGCAGACC+TGG | + | chr5_3:50489542-50489561 | Msa0816270:intron | 45.0% |
GGGAGCAACATTAACGAGTA+CGG | - | chr5_3:50490265-50490284 | None:intergenic | 45.0% | |
! | TCTTAGGTTGCCACTTCCAT+TGG | + | chr5_3:50490518-50490537 | Msa0816270:CDS | 45.0% |
TGCTATTAAAGCCCCTGTCA+TGG | + | chr5_3:50491021-50491040 | Msa0816270:intron | 45.0% | |
CCAAACATTTCTCCACTTGG+CGG | + | chr5_3:50491196-50491215 | Msa0816270:intron | 45.0% | |
CAAACATTTCTCCACTTGGC+GGG | + | chr5_3:50491197-50491216 | Msa0816270:intron | 45.0% | |
AAACATTTCTCCACTTGGCG+GGG | + | chr5_3:50491198-50491217 | Msa0816270:intron | 45.0% | |
ACAGATGAGGAATCACTGCT+TGG | - | chr5_3:50491874-50491893 | None:intergenic | 45.0% | |
ACAAGGTCGTATGATGTAGG+TGG | + | chr5_3:50492004-50492023 | Msa0816270:CDS | 45.0% | |
TGGGTATTCCAATCCATGCT+GGG | - | chr5_3:50492074-50492093 | None:intergenic | 45.0% | |
TTGGGTATTCCAATCCATGC+TGG | - | chr5_3:50492075-50492094 | None:intergenic | 45.0% | |
TCATGGCAAAACATCGTGCA+AGG | + | chr5_3:50492137-50492156 | Msa0816270:CDS | 45.0% | |
! | ACATCGTGCAAGGTTTTTCC+AGG | + | chr5_3:50492147-50492166 | Msa0816270:CDS | 45.0% |
!!! | TGTCATGTTTTTTGTCGGGG+AGG | + | chr5_3:50492663-50492682 | Msa0816270:intron | 45.0% |
!!! | GTCATGTTTTTTGTCGGGGA+GGG | + | chr5_3:50492664-50492683 | Msa0816270:intron | 45.0% |
CTTGTCCACTTAGCAAAGAG+AGG | - | chr5_3:50492785-50492804 | None:intergenic | 45.0% | |
CTCTCTTTGCTAAGTGGACA+AGG | + | chr5_3:50492783-50492802 | Msa0816270:intron | 45.0% | |
TTGCTTTCAGTTCCACCTTC+TGG | + | chr5_3:50493245-50493264 | Msa0816270:CDS | 45.0% | |
ATAACCAATGCACCAGAAGG+TGG | - | chr5_3:50493260-50493279 | None:intergenic | 45.0% | |
TGCACCAAACAGTTGATCGA+AGG | - | chr5_3:50493317-50493336 | None:intergenic | 45.0% | |
CTCTTTACCACAGAATCCAC+AGG | - | chr5_3:50493837-50493856 | None:intergenic | 45.0% | |
GAGGTCAAATCACTAGAGGT+AGG | + | chr5_3:50493874-50493893 | Msa0816270:intron | 45.0% | |
GGTCAAATCACTAGAGGTAG+GGG | + | chr5_3:50493876-50493895 | Msa0816270:intron | 45.0% | |
CCAAGCCTTAACCCAATAAG+TGG | - | chr5_3:50494018-50494037 | None:intergenic | 45.0% | |
CCACTTATTGGGTTAAGGCT+TGG | + | chr5_3:50494015-50494034 | Msa0816270:intron | 45.0% | |
AGGTTTCTATTGGTAGAGCC+AGG | + | chr5_3:50494070-50494089 | Msa0816270:intron | 45.0% | |
TATTGGTAGAGCCAGGAGAT+TGG | + | chr5_3:50494077-50494096 | Msa0816270:intron | 45.0% | |
TTGGTTGGATTCCTGGTTCA+AGG | + | chr5_3:50494096-50494115 | Msa0816270:intron | 45.0% | |
TTGGATTCCTGGTTCAAGGA+TGG | + | chr5_3:50494100-50494119 | Msa0816270:intron | 45.0% | |
CCTTAAACCATCCTTGAACC+AGG | - | chr5_3:50494110-50494129 | None:intergenic | 45.0% | |
CCTGGTTCAAGGATGGTTTA+AGG | + | chr5_3:50494107-50494126 | Msa0816270:intron | 45.0% | |
GGTTCAAGGATGGTTTAAGG+TGG | + | chr5_3:50494110-50494129 | Msa0816270:intron | 45.0% | |
TTCTGGCATAGGAGGAAACA+TGG | + | chr5_3:50494198-50494217 | Msa0816270:intron | 45.0% | |
ATCAGCACTGCCATAATCCA+TGG | + | chr5_3:50494270-50494289 | Msa0816270:intron | 45.0% | |
TTGACAAATTGCAGCCATGG+TGG | - | chr5_3:50494303-50494322 | None:intergenic | 45.0% | |
CGAAGAGACTGCTTCTAACT+TGG | + | chr5_3:50494779-50494798 | Msa0816270:CDS | 45.0% | |
AATGGTCAAGGCCTGATTTC+TGG | - | chr5_3:50494833-50494852 | None:intergenic | 45.0% | |
TTGAGCAGGAAGCTCTCTTT+GGG | + | chr5_3:50495311-50495330 | Msa0816270:intron | 45.0% | |
CAAAACACTTACCGTGAGAC+AGG | - | chr5_3:50495369-50495388 | None:intergenic | 45.0% | |
AGTCGTCACCAGAAGATACA+AGG | - | chr5_3:50495962-50495981 | None:intergenic | 45.0% | |
ACCATTGCAGATTACACGGA+GGG | + | chr5_3:50495985-50496004 | Msa0816270:intron | 45.0% | |
! | GAAAGAAAAAAGGCATGCCC+CGG | + | chr5_3:50496284-50496303 | Msa0816270:three_prime_UTR | 45.0% |
GAGGTTGTTGATGTGTGAGG+CGG | - | chr5_3:50487959-50487978 | None:intergenic | 50.0% | |
AGGGAGGTTGTTGATGTGTG+AGG | - | chr5_3:50487962-50487981 | None:intergenic | 50.0% | |
GAGATGAATGTGAGGAGGAG+AGG | - | chr5_3:50487982-50488001 | None:intergenic | 50.0% | |
AAGGGGAGATGAATGTGAGG+AGG | - | chr5_3:50487987-50488006 | None:intergenic | 50.0% | |
TGTGGTGAGGTGGAGAAGAA+GGG | - | chr5_3:50488005-50488024 | None:intergenic | 50.0% | |
ATGTGGTGAGGTGGAGAAGA+AGG | - | chr5_3:50488006-50488025 | None:intergenic | 50.0% | |
!! | ATCGATTCGAGGATGTGGTG+AGG | - | chr5_3:50488018-50488037 | None:intergenic | 50.0% |
TTCGGATTGATCGGAACCAG+AGG | - | chr5_3:50488115-50488134 | None:intergenic | 50.0% | |
!! | GTGGTCAGCGTGTTATTTGG+TGG | + | chr5_3:50488922-50488941 | Msa0816270:intron | 50.0% |
GTTCTGCCTAGCAGAAAAGG+AGG | - | chr5_3:50489515-50489534 | None:intergenic | 50.0% | |
ATTAAAGCCCCTGTCATGGC+AGG | + | chr5_3:50491025-50491044 | Msa0816270:intron | 50.0% | |
TTAAAGCCCCTGTCATGGCA+GGG | + | chr5_3:50491026-50491045 | Msa0816270:intron | 50.0% | |
AGTAGGAACCTGTGACCTTC+TGG | + | chr5_3:50491084-50491103 | Msa0816270:intron | 50.0% | |
TTGTGTGACCAGAAGGTCAC+AGG | - | chr5_3:50491095-50491114 | None:intergenic | 50.0% | |
CCGCCAAGTGGAGAAATGTT+TGG | - | chr5_3:50491199-50491218 | None:intergenic | 50.0% | |
! | GAGGAATCACTGCTTGGTGA+AGG | - | chr5_3:50491868-50491887 | None:intergenic | 50.0% |
CCAATCCATGCTGGGTCATT+AGG | - | chr5_3:50492066-50492085 | None:intergenic | 50.0% | |
CCTAATGACCCAGCATGGAT+TGG | + | chr5_3:50492063-50492082 | Msa0816270:CDS | 50.0% | |
CTGGAAGAAGGGGTGACTTT+AGG | - | chr5_3:50493184-50493203 | None:intergenic | 50.0% | |
AGCCAGGTAAGCTGGAAGAA+GGG | - | chr5_3:50493195-50493214 | None:intergenic | 50.0% | |
TCTTTGCAAATGAGGCAGCC+AGG | - | chr5_3:50493211-50493230 | None:intergenic | 50.0% | |
AGTTCCACCTTCTGGTGCAT+TGG | + | chr5_3:50493253-50493272 | Msa0816270:CDS | 50.0% | |
!! | CGATCAACTGTTTGGTGCAC+CGG | + | chr5_3:50493318-50493337 | Msa0816270:CDS | 50.0% |
!! | GATCAACTGTTTGGTGCACC+GGG | + | chr5_3:50493319-50493338 | Msa0816270:CDS | 50.0% |
GCATGTAGAGAGAAGACCTG+TGG | + | chr5_3:50493818-50493837 | Msa0816270:intron | 50.0% | |
GAGAAGACCTGTGGATTCTG+TGG | + | chr5_3:50493827-50493846 | Msa0816270:intron | 50.0% | |
AGAGTAGATCTGATGGAGGG+AGG | + | chr5_3:50493855-50493874 | Msa0816270:intron | 50.0% | |
GAGGGAGGTCAAATCACTAG+AGG | + | chr5_3:50493870-50493889 | Msa0816270:intron | 50.0% | |
CAGGAATCCAACCAATCTCC+TGG | - | chr5_3:50494091-50494110 | None:intergenic | 50.0% | |
! | CAGGAGATTGGTTGGATTCC+TGG | + | chr5_3:50494089-50494108 | Msa0816270:intron | 50.0% |
TGGCATAGGAGGAAACATGG+AGG | + | chr5_3:50494201-50494220 | Msa0816270:intron | 50.0% | |
GGAGGATGTAATAGGCTCTG+TGG | + | chr5_3:50494219-50494238 | Msa0816270:intron | 50.0% | |
GTAATAGGCTCTGTGGCCTA+TGG | + | chr5_3:50494226-50494245 | Msa0816270:intron | 50.0% | |
! | TGGCATGGCACCATGGATTA+TGG | - | chr5_3:50494283-50494302 | None:intergenic | 50.0% |
AAATTGCAGCCATGGTGGCA+TGG | - | chr5_3:50494298-50494317 | None:intergenic | 50.0% | |
GCAAAGCTCTGCCAGAAATC+AGG | + | chr5_3:50494819-50494838 | Msa0816270:CDS | 50.0% | |
CTCATAGCGCCTGACTTCAT+AGG | - | chr5_3:50494876-50494895 | None:intergenic | 50.0% | |
CTTGAGCAGGAAGCTCTCTT+TGG | + | chr5_3:50495310-50495329 | Msa0816270:intron | 50.0% | |
ACTACTGTCCTCCTGTCTCA+CGG | + | chr5_3:50495355-50495374 | Msa0816270:CDS | 50.0% | |
AACACTTACCGTGAGACAGG+AGG | - | chr5_3:50495366-50495385 | None:intergenic | 50.0% | |
TGCAACAATACTTGGAGCGG+AGG | + | chr5_3:50495585-50495604 | Msa0816270:CDS | 50.0% | |
CACCATTGCAGATTACACGG+AGG | + | chr5_3:50495984-50496003 | Msa0816270:intron | 50.0% | |
ACCCTCCGTGTAATCTGCAA+TGG | - | chr5_3:50495989-50496008 | None:intergenic | 50.0% | |
GTTGTTGATGTGTGAGGCGG+AGG | - | chr5_3:50487956-50487975 | None:intergenic | 55.0% | |
TGAATGTGAGGAGGAGAGGG+AGG | - | chr5_3:50487978-50487997 | None:intergenic | 55.0% | |
GTGGTGAGGTGGAGAAGAAG+GGG | - | chr5_3:50488004-50488023 | None:intergenic | 55.0% | |
GATTCGAGGATGTGGTGAGG+TGG | - | chr5_3:50488015-50488034 | None:intergenic | 55.0% | |
AAGGGAGTTGAGGGAGGAGA+GGG | - | chr5_3:50488065-50488084 | None:intergenic | 55.0% | |
GGATTGATCGGAACCAGAGG+AGG | - | chr5_3:50488112-50488131 | None:intergenic | 55.0% | |
GGGGCTATTGTGTGACCAGA+AGG | - | chr5_3:50491102-50491121 | None:intergenic | 55.0% | |
ATTTCTCCACTTGGCGGGGT+TGG | + | chr5_3:50491202-50491221 | Msa0816270:intron | 55.0% | |
AGGTGGTGTAGTCAGCGTGA+TGG | + | chr5_3:50492021-50492040 | Msa0816270:CDS | 55.0% | |
ACCCCTTCTTCCAGCTTACC+TGG | + | chr5_3:50493190-50493209 | Msa0816270:CDS | 55.0% | |
GCCAGGTAAGCTGGAAGAAG+GGG | - | chr5_3:50493194-50493213 | None:intergenic | 55.0% | |
CAGCCAGGTAAGCTGGAAGA+AGG | - | chr5_3:50493196-50493215 | None:intergenic | 55.0% | |
AATGAGGCAGCCAGGTAAGC+TGG | - | chr5_3:50493203-50493222 | None:intergenic | 55.0% | |
GGTAGAGCCAGGAGATTGGT+TGG | + | chr5_3:50494081-50494100 | Msa0816270:intron | 55.0% | |
AGACAGGAGGACAGTAGTGG+TGG | - | chr5_3:50495353-50495372 | None:intergenic | 55.0% | |
GTGAGACAGGAGGACAGTAG+TGG | - | chr5_3:50495356-50495375 | None:intergenic | 55.0% | |
GATTACACGGAGGGTGAAGC+AGG | + | chr5_3:50495994-50496013 | Msa0816270:intron | 55.0% | |
! | TTTTAGCGGGGCTGTGTTCC+TGG | - | chr5_3:50496156-50496175 | None:intergenic | 55.0% |
AGGGAGGAGAGGGAGGAAGA+AGG | - | chr5_3:50488055-50488074 | None:intergenic | 60.0% | |
GAAGGGAGTTGAGGGAGGAG+AGG | - | chr5_3:50488066-50488085 | None:intergenic | 60.0% | |
ATCGGAACCAGAGGAGGAGC+TGG | - | chr5_3:50488106-50488125 | None:intergenic | 60.0% | |
ACTTCGAACGGAGCCACGTG+AGG | - | chr5_3:50488146-50488165 | None:intergenic | 60.0% | |
CTGGAACCCTGCCATGACAG+GGG | - | chr5_3:50491035-50491054 | None:intergenic | 60.0% | |
CCTGGAACCCTGCCATGACA+GGG | - | chr5_3:50491036-50491055 | None:intergenic | 60.0% | |
CCTGTCATGGCAGGGTTCCA+GGG | + | chr5_3:50491034-50491053 | Msa0816270:intron | 60.0% | |
ATGTAGCCAACCCCGCCAAG+TGG | - | chr5_3:50491211-50491230 | None:intergenic | 60.0% | |
!! | ACTTGGCGGGGTTGGCTACA+TGG | + | chr5_3:50491210-50491229 | Msa0816270:intron | 60.0% |
GCTCTGTGGCCTATGGAAGC+TGG | + | chr5_3:50494233-50494252 | Msa0816270:intron | 60.0% | |
GCCTATGGAAGCTGGAAGCC+TGG | + | chr5_3:50494241-50494260 | Msa0816270:intron | 60.0% | |
GCCAGGCTTCCAGCTTCCAT+AGG | - | chr5_3:50494245-50494264 | None:intergenic | 60.0% | |
!! | GGCAGTGCTGATTCTGTGCC+AGG | - | chr5_3:50494262-50494281 | None:intergenic | 60.0% |
!! | TCCATGGTGCCATGCCACCA+TGG | + | chr5_3:50494286-50494305 | Msa0816270:intron | 60.0% |
GGAGTTGAGGGAGGAGAGGG+AGG | - | chr5_3:50488062-50488081 | None:intergenic | 65.0% | |
TGGCGGAAGGGAGTTGAGGG+AGG | - | chr5_3:50488071-50488090 | None:intergenic | 65.0% | |
!! | CGGTGGCGGAAGGGAGTTGA+GGG | - | chr5_3:50488074-50488093 | None:intergenic | 65.0% |
!! | TGGTGGTTGCGGTGGCGGAA+GGG | - | chr5_3:50488083-50488102 | None:intergenic | 65.0% |
!! | GGAGGAGCTGGTGGTGGTTG+CGG | - | chr5_3:50488094-50488113 | None:intergenic | 65.0% |
ACCACCACCAGCTCCTCCTC+TGG | + | chr5_3:50488096-50488115 | Msa0816270:CDS | 65.0% | |
ACCAGAGGAGGAGCTGGTGG+TGG | - | chr5_3:50488100-50488119 | None:intergenic | 65.0% | |
GGAACCAGAGGAGGAGCTGG+TGG | - | chr5_3:50488103-50488122 | None:intergenic | 65.0% | |
CCCTGTCATGGCAGGGTTCC+AGG | + | chr5_3:50491033-50491052 | Msa0816270:intron | 65.0% | |
CCCTGGAACCCTGCCATGAC+AGG | - | chr5_3:50491037-50491056 | None:intergenic | 65.0% | |
GCCATGGTGGCATGGCACCA+TGG | - | chr5_3:50494290-50494309 | None:intergenic | 65.0% | |
!! | GCGGTGGCGGAAGGGAGTTG+AGG | - | chr5_3:50488075-50488094 | None:intergenic | 70.0% |
!! | GTGGTGGTTGCGGTGGCGGA+AGG | - | chr5_3:50488084-50488103 | None:intergenic | 70.0% |
!! | GCTGGTGGTGGTTGCGGTGG+CGG | - | chr5_3:50488088-50488107 | None:intergenic | 70.0% |
!! | GGAGCTGGTGGTGGTTGCGG+TGG | - | chr5_3:50488091-50488110 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 50487832 | 50496455 | 50487832 | ID=Msa0816270;Name=Msa0816270 |
chr5_3 | mRNA | 50487832 | 50496455 | 50487832 | ID=Msa0816270-mRNA-1;Parent=Msa0816270;Name=Msa0816270-mRNA-1;_AED=0.13;_eAED=0.13;_QI=24|0.92|0.92|1|0.84|0.85|14|257|609 |
chr5_3 | exon | 50487832 | 50488323 | 50487832 | ID=Msa0816270-mRNA-1:exon:15153;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50488442 | 50488515 | 50488442 | ID=Msa0816270-mRNA-1:exon:15154;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50489055 | 50489116 | 50489055 | ID=Msa0816270-mRNA-1:exon:15155;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50489257 | 50489308 | 50489257 | ID=Msa0816270-mRNA-1:exon:15156;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50489650 | 50489750 | 50489650 | ID=Msa0816270-mRNA-1:exon:15157;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50490200 | 50490249 | 50490200 | ID=Msa0816270-mRNA-1:exon:15158;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50490453 | 50490554 | 50490453 | ID=Msa0816270-mRNA-1:exon:15159;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50491854 | 50491906 | 50491854 | ID=Msa0816270-mRNA-1:exon:15160;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50491994 | 50492168 | 50491994 | ID=Msa0816270-mRNA-1:exon:15161;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50493167 | 50493340 | 50493167 | ID=Msa0816270-mRNA-1:exon:15162;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50494744 | 50494894 | 50494744 | ID=Msa0816270-mRNA-1:exon:15163;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50495319 | 50495376 | 50495319 | ID=Msa0816270-mRNA-1:exon:15164;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50495501 | 50495606 | 50495501 | ID=Msa0816270-mRNA-1:exon:15165;Parent=Msa0816270-mRNA-1 |
chr5_3 | exon | 50495995 | 50496455 | 50495995 | ID=Msa0816270-mRNA-1:exon:15166;Parent=Msa0816270-mRNA-1 |
chr5_3 | five_prime_UTR | 50487832 | 50487855 | 50487832 | ID=Msa0816270-mRNA-1:five_prime_utr;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50487856 | 50488323 | 50487856 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50488442 | 50488515 | 50488442 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50489055 | 50489116 | 50489055 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50489257 | 50489308 | 50489257 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50489650 | 50489750 | 50489650 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50490200 | 50490249 | 50490200 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50490453 | 50490554 | 50490453 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50491854 | 50491906 | 50491854 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50491994 | 50492168 | 50491994 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50493167 | 50493340 | 50493167 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50494744 | 50494894 | 50494744 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50495319 | 50495376 | 50495319 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50495501 | 50495606 | 50495501 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | CDS | 50495995 | 50496198 | 50495995 | ID=Msa0816270-mRNA-1:cds;Parent=Msa0816270-mRNA-1 |
chr5_3 | three_prime_UTR | 50496199 | 50496455 | 50496199 | ID=Msa0816270-mRNA-1:three_prime_utr;Parent=Msa0816270-mRNA-1 |
Gene Sequence |
Protein sequence |