AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0856530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856530 MtrunA17_Chr5g0434811 94.220 519 24 2 12 528 93 607 0.0 1000
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856530 AT2G17250.1 59.026 493 191 5 14 500 89 576 0.0 592

Find 116 sgRNAs with CRISPR-Local

Find 553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACATTATTGTTACGTTTCT+TGG 0.096967 5_4:+51300500 None:intergenic
AATGGTCAAGGCCTGATTTC+TGG 0.177335 5_4:+51296266 None:intergenic
CCACGTGAGGTAAATGAATT+TGG 0.192695 5_4:+51302556 None:intergenic
CTTCATCTTCTTCGCAATTC+TGG 0.241906 5_4:+51300264 None:intergenic
TTGGAGGGAAAAGATGTTTC+AGG 0.244460 5_4:-51301635 Msa0856530:intron
TTGCTTTCAGTTCCACCTTC+TGG 0.244476 5_4:-51297851 Msa0856530:CDS
AGAAAAGCTCACAAGAAATT+TGG 0.246404 5_4:-51301654 Msa0856530:CDS
CTTGAGCAGGAAGCTCTCTT+TGG 0.255727 5_4:-51295787 Msa0856530:intron
TTTAGGTTTGCTTTGTCTCT+TGG 0.268396 5_4:-51295601 Msa0856530:intron
ATTTATTTGTAGTTTATCTA+TGG 0.269211 5_4:-51294607 Msa0856530:three_prime_UTR
CAGATTCCTCAATGTTAAAA+TGG 0.289979 5_4:+51296248 None:intergenic
GAACGGGGCTAAAGATTTAT+TGG 0.290532 5_4:-51294968 Msa0856530:CDS
AAGCTTGGATTGCGTATCTT+AGG 0.300738 5_4:-51300228 Msa0856530:CDS
CCAATCCATGCTGGGTCATT+AGG 0.303403 5_4:+51299033 None:intergenic
AGACTGCAAAACTGGTAGTT+TGG 0.305724 5_4:+51294567 None:intergenic
TTAGGTTTGCTTTGTCTCTT+GGG 0.321498 5_4:-51295600 Msa0856530:intron
TATAACAGGAGTATGGATTT+AGG 0.322547 5_4:+51294667 None:intergenic
GCTTCTTATGCAACAATACT+TGG 0.323139 5_4:-51295520 Msa0856530:CDS
ATTAGTTCCATCTATCTTCA+TGG 0.328121 5_4:-51298976 Msa0856530:CDS
TGAGCTTAATTGACTTTCAT+TGG 0.332356 5_4:+51301446 None:intergenic
ATTAATAAAGACTGCAAAAC+TGG 0.334729 5_4:+51294559 None:intergenic
TGAATGCGATGAAACTATTA+AGG 0.339514 5_4:-51302477 Msa0856530:CDS
CTGCAGATACTTGAGATATA+TGG 0.357343 5_4:-51294765 Msa0856530:three_prime_UTR
ATAGTCTTCACTACTATAAC+AGG 0.368499 5_4:+51294653 None:intergenic
ACCCCTTCTTCCAGCTTACC+TGG 0.387473 5_4:-51297906 Msa0856530:CDS
TGCATTGGTTATTACAGCTC+TGG 0.389369 5_4:-51297828 Msa0856530:CDS
GCTGGGTCATTAGGATATAA+AGG 0.391038 5_4:+51299042 None:intergenic
AAAACAAGCGAAGTTAATAT+TGG 0.391828 5_4:-51295556 Msa0856530:CDS
GACTGCAAAACTGGTAGTTT+GGG 0.392164 5_4:+51294568 None:intergenic
TTGAGCAGGAAGCTCTCTTT+GGG 0.394155 5_4:-51295786 Msa0856530:intron
CTGGAAGAAGGGGTGACTTT+AGG 0.399170 5_4:+51297915 None:intergenic
GAGTTTGTTAAGGTTGCTAA+TGG 0.401292 5_4:-51302431 Msa0856530:CDS
CGAAGAGACTGCTTCTAACT+TGG 0.405411 5_4:-51296317 Msa0856530:CDS
CGATCAACTGTTTGGTGCAC+CGG 0.416098 5_4:-51297778 Msa0856530:CDS
GTTATAGTAGTGAAGACTAT+TGG 0.416171 5_4:-51294650 Msa0856530:three_prime_UTR
GCAAAGCTCTGCCAGAAATC+AGG 0.417403 5_4:-51296277 Msa0856530:CDS
TTAGAAATGTGGAGTGTATC+AGG 0.418848 5_4:-51301001 Msa0856530:intron
TCACTACTATAACAGGAGTA+TGG 0.425893 5_4:+51294660 None:intergenic
GTGAAATTAAAATGTTTGTT+TGG 0.426506 5_4:-51294874 Msa0856530:three_prime_UTR
TCATCGACAATAATGAGAAC+GGG 0.429049 5_4:-51294984 Msa0856530:CDS
TCTTAGGTTGCCACTTCCAT+TGG 0.431065 5_4:-51300212 Msa0856530:CDS
TACTTTGATGGAGTTTGTTA+AGG 0.432512 5_4:-51302441 Msa0856530:CDS
AGTTGTGCTTGATACTTTGA+TGG 0.436883 5_4:-51302453 Msa0856530:CDS
AGTTCCACCTTCTGGTGCAT+TGG 0.437968 5_4:-51297843 Msa0856530:CDS
ACATCCTTCGATCAACTGTT+TGG 0.439932 5_4:-51297786 Msa0856530:CDS
AGTTAAAATTTACTAAAGCT+TGG 0.442017 5_4:-51300243 Msa0856530:CDS
CTCATAGCGCCTGACTTCAT+AGG 0.448545 5_4:+51296223 None:intergenic
AATGAGGCAGCCAGGTAAGC+TGG 0.457951 5_4:+51297896 None:intergenic
ACCACCACCAGCTCCTCCTC+TGG 0.470797 5_4:-51302590 Msa0856530:intron
TTGGGTATTCCAATCCATGC+TGG 0.473646 5_4:+51299024 None:intergenic
GTAAATGAATTTGGATTGAT+CGG 0.478506 5_4:+51302565 None:intergenic
CCTAATGACCCAGCATGGAT+TGG 0.485238 5_4:-51299033 Msa0856530:CDS
CAGCCAGGTAAGCTGGAAGA+AGG 0.488496 5_4:+51297903 None:intergenic
AGCCAGGTAAGCTGGAAGAA+GGG 0.489279 5_4:+51297904 None:intergenic
ATTTCAAGTATATTGATGTT+CGG 0.489524 5_4:-51302193 Msa0856530:intron
ACTCAATTTCTTTGCAAATG+AGG 0.492729 5_4:+51297880 None:intergenic
CAAAACACTTACCGTGAGAC+AGG 0.494028 5_4:+51295731 None:intergenic
GAATCTGATCCTATGAAGTC+AGG 0.505902 5_4:-51296232 Msa0856530:CDS
TTGACAAGGTCGTATGATGT+AGG 0.506754 5_4:-51299095 Msa0856530:CDS
TTCTCTGAAAAGAGAGAGGA+TGG 0.507254 5_4:+51295054 None:intergenic
GATTACACGGAGGGTGAAGC+AGG 0.509973 5_4:-51295103 Msa0856530:CDS
TCTTTGCAAATGAGGCAGCC+AGG 0.517329 5_4:+51297888 None:intergenic
TGGGTATTCCAATCCATGCT+GGG 0.522547 5_4:+51299025 None:intergenic
AATAATAACTTACAATACTA+CGG 0.526362 5_4:+51302372 None:intergenic
TATTTGTAGTTTATCTATGG+TGG 0.527038 5_4:-51294604 Msa0856530:three_prime_UTR
TTTGTTAAGGTTGCTAATGG+TGG 0.527835 5_4:-51302428 Msa0856530:CDS
CCAAATTCATTTACCTCACG+TGG 0.537243 5_4:-51302556 Msa0856530:CDS
GATAAAACTGCAAGCGCAGA+TGG 0.542599 5_4:-51301471 Msa0856530:CDS
ATCACTTATCGATTGTCTTG+TGG 0.543229 5_4:-51302504 Msa0856530:CDS
ATGAAAGTCAATTAAGCTCA+AGG 0.545065 5_4:-51301443 Msa0856530:intron
GAGGAATCACTGCTTGGTGA+AGG 0.547446 5_4:+51299231 None:intergenic
GGCTAAAGATTTATTGGACC+AGG 0.548798 5_4:-51294962 Msa0856530:CDS
ACCTCTTTGAACACATCCAA+TGG 0.549353 5_4:+51300196 None:intergenic
GATCAACTGTTTGGTGCACC+GGG 0.550891 5_4:-51297777 Msa0856530:intron
AACTTGGATAATACTCAGAA+TGG 0.551493 5_4:-51296301 Msa0856530:CDS
AAAGCTCACAAGAAATTTGG+AGG 0.555352 5_4:-51301651 Msa0856530:CDS
TTGAACACATCCAATGGAAG+TGG 0.555934 5_4:+51300202 None:intergenic
GCCAGGTAAGCTGGAAGAAG+GGG 0.560855 5_4:+51297905 None:intergenic
TCCATTGGATGTGTTCAAAG+AGG 0.564996 5_4:-51300197 Msa0856530:intron
GGTGTTTACCATAACATGAT+GGG 0.565453 5_4:+51299197 None:intergenic
ATATGGTGTAGTACATATTG+TGG 0.566500 5_4:+51301065 None:intergenic
TTGCACCATTGCAGATTACA+CGG 0.577570 5_4:-51295116 Msa0856530:intron
CCTCAATGTTAAAATGGTCA+AGG 0.580409 5_4:+51296254 None:intergenic
AGACAGGAGGACAGTAGTGG+TGG 0.591867 5_4:+51295747 None:intergenic
ACAGATGAGGAATCACTGCT+TGG 0.595439 5_4:+51299225 None:intergenic
TCATGGCAAAACATCGTGCA+AGG 0.595702 5_4:-51298959 Msa0856530:CDS
ACCATTGCAGATTACACGGA+GGG 0.596485 5_4:-51295112 Msa0856530:intron
TTATGCAACAATACTTGGAG+CGG 0.600906 5_4:-51295515 Msa0856530:CDS
AGAAGTAATACGTCTAGCGG+AGG 0.603896 5_4:-51294711 Msa0856530:three_prime_UTR
TATATCCTAATGACCCAGCA+TGG 0.606697 5_4:-51299038 Msa0856530:CDS
TGCAACAATACTTGGAGCGG+AGG 0.610817 5_4:-51295512 Msa0856530:intron
ACTTATCGATTGTCTTGTGG+CGG 0.611390 5_4:-51302501 Msa0856530:CDS
ATCATCGACAATAATGAGAA+CGG 0.612651 5_4:-51294985 Msa0856530:CDS
AAAAGAAGTAATACGTCTAG+CGG 0.612735 5_4:-51294714 Msa0856530:three_prime_UTR
ATCATTCTCTGAAAAGAGAG+AGG 0.615510 5_4:+51295050 None:intergenic
ATAACCAATGCACCAGAAGG+TGG 0.616650 5_4:+51297839 None:intergenic
TGCACCAAACAGTTGATCGA+AGG 0.618010 5_4:+51297782 None:intergenic
TTTGGATTGATCGGAACCAG+AGG 0.619745 5_4:+51302574 None:intergenic
CATATTGTGGATGATGCACT+CGG 0.624795 5_4:+51301078 None:intergenic
ATACATCTGATTTAGAAATG+TGG 0.629117 5_4:-51301012 Msa0856530:CDS
ACTACTGTCCTCCTGTCTCA+CGG 0.630327 5_4:-51295742 Msa0856530:intron
GTAATAACCAATGCACCAGA+AGG 0.635450 5_4:+51297836 None:intergenic
GGATTGATCGGAACCAGAGG+AGG 0.638563 5_4:+51302577 None:intergenic
AAGCTCACAAGAAATTTGGA+GGG 0.638699 5_4:-51301650 Msa0856530:CDS
GAAGTAATACGTCTAGCGGA+GGG 0.639426 5_4:-51294710 Msa0856530:three_prime_UTR
GTGAGACAGGAGGACAGTAG+TGG 0.650028 5_4:+51295744 None:intergenic
CATTTGCAAAGAAATTGAGT+AGG 0.655411 5_4:-51297877 Msa0856530:CDS
GAAACTCGTCGAACTTCGAA+CGG 0.658319 5_4:+51302531 None:intergenic
ACTTCGAACGGAGCCACGTG+AGG 0.663920 5_4:+51302543 None:intergenic
TGTGCAGTGATTTCTTGACA+AGG 0.666059 5_4:-51299109 Msa0856530:intron
AGGTGGTGTAGTCAGCGTGA+TGG 0.671351 5_4:-51299075 Msa0856530:CDS
AACACTTACCGTGAGACAGG+AGG 0.675774 5_4:+51295734 None:intergenic
CATCGACAATAATGAGAACG+GGG 0.677716 5_4:-51294983 Msa0856530:CDS
ACAAGGTCGTATGATGTAGG+TGG 0.691770 5_4:-51299092 Msa0856530:CDS
ATGATGGGATTAGACAGATG+AGG 0.697642 5_4:+51299212 None:intergenic
CACCATTGCAGATTACACGG+AGG 0.732506 5_4:-51295113 Msa0856530:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATATTTCATAATCAAT+TGG - chr5_4:51297393-51297412 Msa0856530:intron 10.0%
!!! TACATTTATATTTTGTAATT+TGG - chr5_4:51297735-51297754 Msa0856530:intron 10.0%
!! AAAGATAAAAAATTTCTATT+TGG - chr5_4:51299925-51299944 Msa0856530:intron 10.0%
!!! TATATTTTTTATTTTTCTGT+TGG - chr5_4:51303493-51303512 Msa0856530:intron 10.0%
!!! ATATTTTTTATTTTTCTGTT+GGG - chr5_4:51303494-51303513 Msa0856530:intron 10.0%
!! TTGTTTGTAAATAAATAATG+TGG - chr5_4:51295250-51295269 Msa0856530:intron 15.0%
!! TGTTTGTAAATAAATAATGT+GGG - chr5_4:51295251-51295270 Msa0856530:intron 15.0%
!! AAAACTAAATTGAAATTCTT+TGG - chr5_4:51295333-51295352 Msa0856530:intron 15.0%
!! AAACTAAATTGAAATTCTTT+GGG - chr5_4:51295334-51295353 Msa0856530:intron 15.0%
!! AATAATAACTTACAATACTA+CGG + chr5_4:51295960-51295979 None:intergenic 15.0%
!!! ATTTGTTAGTTTGATTTTAT+TGG - chr5_4:51296051-51296070 Msa0856530:intron 15.0%
!!! TGCATTTATATTTTGTAATT+TGG - chr5_4:51297647-51297666 Msa0856530:intron 15.0%
!!! CATTTTATGATCATTTTATA+TGG + chr5_4:51297769-51297788 None:intergenic 15.0%
!!! TTATTTTCAAAGATTTGTTT+AGG + chr5_4:51298417-51298436 None:intergenic 15.0%
!!! AGAGTTTTTCATAAAATTTT+GGG + chr5_4:51299326-51299345 None:intergenic 15.0%
!!! TAGAGTTTTTCATAAAATTT+TGG + chr5_4:51299327-51299346 None:intergenic 15.0%
!! TGTAAATTATATCTAAATGT+TGG + chr5_4:51301774-51301793 None:intergenic 15.0%
!! GTTTCTAATTTCTATAAAAT+TGG - chr5_4:51302950-51302969 Msa0856530:intron 15.0%
!!! ATATATGGTAAATTTTGTAA+GGG - chr5_4:51303579-51303598 Msa0856530:intron 15.0%
!! ATTTATTTGTAGTTTATCTA+TGG - chr5_4:51303722-51303741 Msa0856530:intron 15.0%
!! AAAATCAATAGAAAAAGGTT+TGG + chr5_4:51294809-51294828 None:intergenic 20.0%
!! ACAAGAAAATCAATAGAAAA+AGG + chr5_4:51294814-51294833 None:intergenic 20.0%
!! ATTTATTTACAAACAAGACT+TGG + chr5_4:51295246-51295265 None:intergenic 20.0%
!!! ATTTCAAGTATATTGATGTT+CGG - chr5_4:51296136-51296155 Msa0856530:intron 20.0%
!! GAACTAAAAATACAAATTCT+TGG + chr5_4:51296201-51296220 None:intergenic 20.0%
!!! TAAAAAGTGTTGTTAAATAG+AGG - chr5_4:51296430-51296449 Msa0856530:intron 20.0%
!! CACAAAACAAAACTAAAATA+GGG + chr5_4:51296558-51296577 None:intergenic 20.0%
!!! TCTTTTCAATTCCAAATATT+TGG - chr5_4:51296794-51296813 Msa0856530:intron 20.0%
!! AATGAGAATAACCAAATATT+TGG + chr5_4:51296808-51296827 None:intergenic 20.0%
!! CATAAAATATAGAACTCAAA+AGG + chr5_4:51297434-51297453 None:intergenic 20.0%
!! TATGCATAACAATTATGTAA+TGG + chr5_4:51298029-51298048 None:intergenic 20.0%
!! AGTTAAAATTTACTAAAGCT+TGG - chr5_4:51298086-51298105 Msa0856530:intron 20.0%
!! TTTAGTAATATATGACACTA+TGG - chr5_4:51298252-51298271 Msa0856530:intron 20.0%
!! TAAAACAAAAAAGTCAAACT+GGG + chr5_4:51298721-51298740 None:intergenic 20.0%
!! TTAAAACAAAAAAGTCAAAC+TGG + chr5_4:51298722-51298741 None:intergenic 20.0%
!! AAGAAAGAAGAAAAGATAAA+TGG + chr5_4:51298883-51298902 None:intergenic 20.0%
!!! AAAGTGAATTCTATTTGTTT+TGG - chr5_4:51298950-51298969 Msa0856530:CDS 20.0%
!!! AAGTGAATTCTATTTGTTTT+GGG - chr5_4:51298951-51298970 Msa0856530:CDS 20.0%
!! TATGTTCTGTTTAATATGAA+TGG - chr5_4:51299002-51299021 Msa0856530:CDS 20.0%
!! AAGAAAATGCAAAATCAAAA+GGG + chr5_4:51299058-51299077 None:intergenic 20.0%
!! AAAGAAAATGCAAAATCAAA+AGG + chr5_4:51299059-51299078 None:intergenic 20.0%
!!! TTTGCATTTTCTTTTTTACT+AGG - chr5_4:51299065-51299084 Msa0856530:CDS 20.0%
!!! CAGAAATTGACATTTTATTA+TGG - chr5_4:51299162-51299181 Msa0856530:intron 20.0%
!!! TTAAATTGTTTTATCCAAAC+TGG + chr5_4:51299550-51299569 None:intergenic 20.0%
!! ATGCTGCAAAATTAATTTAT+CGG - chr5_4:51299849-51299868 Msa0856530:intron 20.0%
!!! AGCATATATCATTTTCTAAA+TGG + chr5_4:51300739-51300758 None:intergenic 20.0%
!!! ACTTTTCTATTCATCTTATT+CGG - chr5_4:51300772-51300791 Msa0856530:intron 20.0%
!! AAAAATCTGCAATATAATTC+TGG - chr5_4:51301414-51301433 Msa0856530:intron 20.0%
!!! GAAAGATTTGTTAACTTAAA+TGG - chr5_4:51301591-51301610 Msa0856530:intron 20.0%
!! ACAATACATGTAAAACTAAA+TGG + chr5_4:51302302-51302321 None:intergenic 20.0%
!! CATGTATTGTTAATGTTATA+TGG - chr5_4:51302312-51302331 Msa0856530:intron 20.0%
!! AAGATTAAATACAACAATGA+AGG + chr5_4:51302655-51302674 None:intergenic 20.0%
!!! GTAAAAGCATATAATGTTTA+AGG + chr5_4:51302701-51302720 None:intergenic 20.0%
!!! CATTTTTGTATTTTGTATAC+TGG - chr5_4:51303063-51303082 Msa0856530:intron 20.0%
!!! AATTTTATTTTTGTCCTACA+AGG + chr5_4:51303104-51303123 None:intergenic 20.0%
!!! AACAAACATTTTAATTTCAC+AGG + chr5_4:51303455-51303474 None:intergenic 20.0%
!! GTGAAATTAAAATGTTTGTT+TGG - chr5_4:51303455-51303474 Msa0856530:intron 20.0%
!!! GATATATGGTAAATTTTGTA+AGG - chr5_4:51303578-51303597 Msa0856530:intron 20.0%
!!! AATTTTTCAAGGAGTTTTAG+AGG + chr5_4:51294786-51294805 None:intergenic 25.0%
!!! AAAAGGTTTGGAATTTTTCA+AGG + chr5_4:51294797-51294816 None:intergenic 25.0%
!!! ATGATAAGTACTGAAATATG+TGG - chr5_4:51294866-51294885 Msa0856530:three_prime_UTR 25.0%
!! AATCTTTTGCATGTTGAAAA+TGG - chr5_4:51295023-51295042 Msa0856530:CDS 25.0%
! AAATGGATGGATAAAAACAT+AGG - chr5_4:51295040-51295059 Msa0856530:CDS 25.0%
!! AAAACATAGGTGATTTTGTT+TGG - chr5_4:51295053-51295072 Msa0856530:CDS 25.0%
!!! AAACATAGGTGATTTTGTTT+GGG - chr5_4:51295054-51295073 Msa0856530:CDS 25.0%
! ACTTCACAAATATTGACAAA+AGG + chr5_4:51295090-51295109 None:intergenic 25.0%
! TATAATTTGATTCCAATGCT+TGG - chr5_4:51295117-51295136 Msa0856530:intron 25.0%
!! TGTCTTTAGTATGAAGTATT+TGG - chr5_4:51295184-51295203 Msa0856530:intron 25.0%
!! TAATTTTTGTCTTAGATGCT+TGG - chr5_4:51295281-51295300 Msa0856530:intron 25.0%
!!! TCAATTTAGTTTTCACAAAG+AGG + chr5_4:51295326-51295345 None:intergenic 25.0%
! AAGCAAAAACAATGTGAAAT+AGG + chr5_4:51295425-51295444 None:intergenic 25.0%
! GTAAATGAATTTGGATTGAT+CGG + chr5_4:51295767-51295786 None:intergenic 25.0%
! GCACAAAACAAAACTAAAAT+AGG + chr5_4:51296559-51296578 None:intergenic 25.0%
! TCATCTTCTTCTCTTTATAA+AGG + chr5_4:51296956-51296975 None:intergenic 25.0%
! TTATAGCATATTGTATGACA+TGG + chr5_4:51297043-51297062 None:intergenic 25.0%
!! ATACATCTAGTTTCAAAACT+AGG + chr5_4:51297168-51297187 None:intergenic 25.0%
! ATACATCTGATTTAGAAATG+TGG - chr5_4:51297317-51297336 Msa0856530:intron 25.0%
! TACATTATTGTTACGTTTCT+TGG + chr5_4:51297832-51297851 None:intergenic 25.0%
! GAAAATTACAATGTAATCCA+AGG + chr5_4:51297918-51297937 None:intergenic 25.0%
! TACATAATTGTTATGCATAC+AGG - chr5_4:51298030-51298049 Msa0856530:intron 25.0%
!! ATGTGTTTGAAATTTCAGTA+TGG - chr5_4:51298169-51298188 Msa0856530:intron 25.0%
!!! TTTACAGATATGCTATTTCT+AGG - chr5_4:51298287-51298306 Msa0856530:intron 25.0%
! TGTATATCTAAGTGTTTGTT+TGG - chr5_4:51298327-51298346 Msa0856530:intron 25.0%
! TAGGAAATGAAATGAAAACA+AGG + chr5_4:51298398-51298417 None:intergenic 25.0%
!! TTGTCATTAAAAGTGTAAAC+AGG - chr5_4:51298465-51298484 Msa0856530:intron 25.0%
!! AGAGTCTTGATATAACATTT+TGG - chr5_4:51298569-51298588 Msa0856530:intron 25.0%
! AAAACAAAAAAGTCAAACTG+GGG + chr5_4:51298720-51298739 None:intergenic 25.0%
!!! AGTGAATTCTATTTGTTTTG+GGG - chr5_4:51298952-51298971 Msa0856530:CDS 25.0%
! AGAAAATGCAAAATCAAAAG+GGG + chr5_4:51299057-51299076 None:intergenic 25.0%
! ATACATGTAAAACTAACCAA+TGG - chr5_4:51299429-51299448 Msa0856530:intron 25.0%
! TACATGTAAAACTAACCAAT+GGG - chr5_4:51299430-51299449 Msa0856530:intron 25.0%
! ATAAAACAATTTAAGCATGC+TGG - chr5_4:51299556-51299575 Msa0856530:intron 25.0%
!!! TTTTTTTTGCAACAATGATC+AGG - chr5_4:51299705-51299724 Msa0856530:intron 25.0%
!! CTAGATAACATTCAATGTTT+TGG + chr5_4:51300269-51300288 None:intergenic 25.0%
!!! CATTAGTAAATTTTGTTTCC+TGG - chr5_4:51300616-51300635 Msa0856530:intron 25.0%
! TTTCCTGGATTAATATATCT+TGG - chr5_4:51300631-51300650 Msa0856530:intron 25.0%
! TACCAAACATAGATACAAAA+TGG + chr5_4:51300933-51300952 None:intergenic 25.0%
!!! TGGTTTTATATAGAACACTT+TGG - chr5_4:51301200-51301219 Msa0856530:intron 25.0%
! GTATCTATGTTTCTCAAATT+AGG - chr5_4:51301283-51301302 Msa0856530:intron 25.0%
! TTCTCAAATTAGGTTTCTAT+TGG - chr5_4:51301293-51301312 Msa0856530:intron 25.0%
!! TTATATTGCAGATTTTTGTC+TGG + chr5_4:51301411-51301430 None:intergenic 25.0%
! TGCAATTGAAAACTAAATAG+AGG - chr5_4:51301798-51301817 Msa0856530:intron 25.0%
! TTATTATCCCTAATCAAGTT+GGG - chr5_4:51301827-51301846 Msa0856530:intron 25.0%
!!! AATTTCAAAATTTGTTGCTC+TGG - chr5_4:51301867-51301886 Msa0856530:intron 25.0%
!! AAATTAGCTCTCCAATTAAA+CGG + chr5_4:51301942-51301961 None:intergenic 25.0%
! CTAATTTCTGATATTTGAAC+AGG - chr5_4:51301955-51301974 Msa0856530:intron 25.0%
! TTGTTAATGTTATATGGTCA+AGG - chr5_4:51302318-51302337 Msa0856530:intron 25.0%
! AACAAATTAAGCATGACATT+AGG - chr5_4:51302424-51302443 Msa0856530:CDS 25.0%
! TAAATACAACAATGAAGGAA+AGG + chr5_4:51302650-51302669 None:intergenic 25.0%
! AAAACAAGCGAAGTTAATAT+TGG - chr5_4:51302773-51302792 Msa0856530:intron 25.0%
! ATAAAGGACGAAAAACAAAA+TGG + chr5_4:51302850-51302869 None:intergenic 25.0%
! TATAAGGCACATTACTATAA+AGG + chr5_4:51302866-51302885 None:intergenic 25.0%
! ATTCTCTTATTGTGCAAATT+TGG + chr5_4:51302893-51302912 None:intergenic 25.0%
! AAATTTGCACAATAAGAGAA+TGG - chr5_4:51302892-51302911 Msa0856530:intron 25.0%
!! TTGAAGATCAAAATTTTCAC+CGG + chr5_4:51303538-51303557 None:intergenic 25.0%
! TATTTGTAGTTTATCTATGG+TGG - chr5_4:51303725-51303744 Msa0856530:intron 25.0%
! TTTTCACGTGTTTGAGAAAA+TGG - chr5_4:51294586-51294605 Msa0856530:three_prime_UTR 30.0%
ACGAAAATTGCAAACAAAAC+AGG + chr5_4:51294705-51294724 None:intergenic 30.0%
! TTTTGCATGTTGAAAATGGA+TGG - chr5_4:51295027-51295046 Msa0856530:CDS 30.0%
! GTTTTCACAAAGAGGATTAA+AGG + chr5_4:51295318-51295337 None:intergenic 30.0%
CTATAATCCTCATGTTTCAA+AGG + chr5_4:51295363-51295382 None:intergenic 30.0%
!! CTTTGAAACATGAGGATTAT+AGG - chr5_4:51295361-51295380 Msa0856530:intron 30.0%
AATGAAACATGAAACGAAAG+TGG + chr5_4:51295519-51295538 None:intergenic 30.0%
TGAATGCGATGAAACTATTA+AGG - chr5_4:51295852-51295871 Msa0856530:intron 30.0%
!! TACTTTGATGGAGTTTGTTA+AGG - chr5_4:51295888-51295907 Msa0856530:intron 30.0%
TCGTCAATGTTGTTAAATAG+CGG - chr5_4:51296323-51296342 Msa0856530:CDS 30.0%
CAGTACTAAATAGCATATCA+CGG + chr5_4:51296410-51296429 None:intergenic 30.0%
! AATTTCTTGTGAGCTTTTCT+AGG + chr5_4:51296675-51296694 None:intergenic 30.0%
AGAAAAGCTCACAAGAAATT+TGG - chr5_4:51296675-51296694 Msa0856530:intron 30.0%
AGATTAAGAAAAGCAAGCTA+AGG + chr5_4:51296730-51296749 None:intergenic 30.0%
! TGAGCTTAATTGACTTTCAT+TGG + chr5_4:51296886-51296905 None:intergenic 30.0%
ATGAAAGTCAATTAAGCTCA+AGG - chr5_4:51296886-51296905 Msa0856530:intron 30.0%
GCAAGAATAAAATTAACCAC+TGG + chr5_4:51296927-51296946 None:intergenic 30.0%
! AAATCATTTAAGACCAGCTA+TGG + chr5_4:51296979-51296998 None:intergenic 30.0%
! ACATCTCTAATTTTTCTGCT+AGG - chr5_4:51297132-51297151 Msa0856530:intron 30.0%
ATATGGTGTAGTACATATTG+TGG + chr5_4:51297267-51297286 None:intergenic 30.0%
!!! TATCGTCTGATTTTTCAAGA+GGG + chr5_4:51297300-51297319 None:intergenic 30.0%
!! GATCAAGTAAGAAGTATCTT+TGG - chr5_4:51297522-51297541 Msa0856530:intron 30.0%
TTTATGTGGGATCAGTTATA+TGG + chr5_4:51297583-51297602 None:intergenic 30.0%
! AACCAAAAGCTTGTTTATGT+GGG + chr5_4:51297596-51297615 None:intergenic 30.0%
! TAACCAAAAGCTTGTTTATG+TGG + chr5_4:51297597-51297616 None:intergenic 30.0%
!! TGGTTATTCTTGTTGTTCTA+AGG - chr5_4:51297611-51297630 Msa0856530:intron 30.0%
!! CTTGTTGTTCTAAGGAAAAA+TGG - chr5_4:51297619-51297638 Msa0856530:intron 30.0%
AACCAAAAGCCTATTTAAGT+GGG + chr5_4:51297684-51297703 None:intergenic 30.0%
TAACCAAAAGCCTATTTAAG+TGG + chr5_4:51297685-51297704 None:intergenic 30.0%
!! TGGTTATTCTTGTTGTTCTA+TGG - chr5_4:51297611-51297630 Msa0856530:intron 30.0%
TAAAATGCTTTCTGTAGATG+TGG - chr5_4:51297782-51297801 Msa0856530:CDS 30.0%
ATAAAAGGTCCTCATTAATG+GGG + chr5_4:51297895-51297914 None:intergenic 30.0%
GATAAAAGGTCCTCATTAAT+GGG + chr5_4:51297896-51297915 None:intergenic 30.0%
CAATGTAATCCAAGGATAAA+AGG + chr5_4:51297910-51297929 None:intergenic 30.0%
CATCAATCTCCAGAATATAA+TGG + chr5_4:51298198-51298217 None:intergenic 30.0%
ATCTAAGTGTTTGTTTGGTT+TGG - chr5_4:51298332-51298351 Msa0856530:intron 30.0%
! TCTAAGTGTTTGTTTGGTTT+GGG - chr5_4:51298333-51298352 Msa0856530:intron 30.0%
GAAATGAAATGAAAACAAGG+TGG + chr5_4:51298395-51298414 None:intergenic 30.0%
GAAATCAAGTGAAATCAATG+TGG - chr5_4:51298437-51298456 Msa0856530:intron 30.0%
TGTACATACGTGTATATATG+TGG - chr5_4:51298535-51298554 Msa0856530:intron 30.0%
CAAAAAGATATCCACATTTC+AGG + chr5_4:51298602-51298621 None:intergenic 30.0%
! AAATACATGATGGGGATTTA+CGG + chr5_4:51298846-51298865 None:intergenic 30.0%
CTTAGACAAAATACATGATG+GGG + chr5_4:51298854-51298873 None:intergenic 30.0%
CCTTAGACAAAATACATGAT+GGG + chr5_4:51298855-51298874 None:intergenic 30.0%
TCCTTAGACAAAATACATGA+TGG + chr5_4:51298856-51298875 None:intergenic 30.0%
!!! GTGAATTCTATTTGTTTTGG+GGG - chr5_4:51298953-51298972 Msa0856530:CDS 30.0%
AAAATGCAAAATCAAAAGGG+GGG + chr5_4:51299055-51299074 None:intergenic 30.0%
GAAAATGCAAAATCAAAAGG+GGG + chr5_4:51299056-51299075 None:intergenic 30.0%
ATTAGTTCCATCTATCTTCA+TGG - chr5_4:51299353-51299372 Msa0856530:intron 30.0%
!! GTCATTTTATAAGCTTTACC+TGG + chr5_4:51299401-51299420 None:intergenic 30.0%
ACATGTAAAACTAACCAATG+GGG - chr5_4:51299431-51299450 Msa0856530:intron 30.0%
ACAACATCGTTAATATGCAA+CGG - chr5_4:51299668-51299687 Msa0856530:intron 30.0%
!!! GAAAGTGTCATGTTTTTTGT+CGG - chr5_4:51299891-51299910 Msa0856530:intron 30.0%
!!! AAAGTGTCATGTTTTTTGTC+GGG - chr5_4:51299892-51299911 Msa0856530:intron 30.0%
! CTTTTTCTGTATAGCAATAG+AGG + chr5_4:51299984-51300003 None:intergenic 30.0%
ACCCAAAGAAATAGTCAATT+AGG - chr5_4:51300042-51300061 Msa0856530:intron 30.0%
! GCCTAATTGACTATTTCTTT+GGG + chr5_4:51300046-51300065 None:intergenic 30.0%
! AGCCTAATTGACTATTTCTT+TGG + chr5_4:51300047-51300066 None:intergenic 30.0%
!! AACCAAAGCATTGTATGTTA+TGG - chr5_4:51300092-51300111 Msa0856530:intron 30.0%
! GAAAAGAGAGGTATAATATG+GGG + chr5_4:51300178-51300197 None:intergenic 30.0%
! CGAAAAGAGAGGTATAATAT+GGG + chr5_4:51300179-51300198 None:intergenic 30.0%
! TCGAAAAGAGAGGTATAATA+TGG + chr5_4:51300180-51300199 None:intergenic 30.0%
! CTAATTCACTATTTCTTTGG+GGG + chr5_4:51300217-51300236 None:intergenic 30.0%
! CCTAATTCACTATTTCTTTG+GGG + chr5_4:51300218-51300237 None:intergenic 30.0%
! GCCTAATTCACTATTTCTTT+GGG + chr5_4:51300219-51300238 None:intergenic 30.0%
! AGCCTAATTCACTATTTCTT+TGG + chr5_4:51300220-51300239 None:intergenic 30.0%
TAATTGAGTGGTTTCTGTAA+TGG - chr5_4:51300239-51300258 Msa0856530:CDS 30.0%
! GTTATCTAGTGATGATGAAA+AGG - chr5_4:51300280-51300299 Msa0856530:CDS 30.0%
TGCATATTGTCAGAAAATGA+AGG + chr5_4:51300365-51300384 None:intergenic 30.0%
ACTCAATTTCTTTGCAAATG+AGG + chr5_4:51300452-51300471 None:intergenic 30.0%
CATTTGCAAAGAAATTGAGT+AGG - chr5_4:51300452-51300471 Msa0856530:intron 30.0%
TCTCCAAGATATATTAATCC+AGG + chr5_4:51300637-51300656 None:intergenic 30.0%
AAATGATATATGCTGTGTTC+AGG - chr5_4:51300745-51300764 Msa0856530:intron 30.0%
!!! TGCCATTTTGTATCTATGTT+TGG - chr5_4:51300928-51300947 Msa0856530:intron 30.0%
! TCTACCATCTTTTCTACTAT+AGG + chr5_4:51301010-51301029 None:intergenic 30.0%
AAGATGGTAGAAACTAGATT+TGG - chr5_4:51301019-51301038 Msa0856530:CDS 30.0%
AGATGGTAGAAACTAGATTT+GGG - chr5_4:51301020-51301039 Msa0856530:CDS 30.0%
TATAGGAGAAGCTATTAAGA+AGG - chr5_4:51301147-51301166 Msa0856530:intron 30.0%
TACTATGATAAGAGAAATGC+AGG - chr5_4:51301560-51301579 Msa0856530:intron 30.0%
TGTCTTTCCATATAAGAGAT+CGG + chr5_4:51301635-51301654 None:intergenic 30.0%
ATATTGTCTGATGTCACTAT+TGG - chr5_4:51301706-51301725 Msa0856530:intron 30.0%
GTTATTATCCCTAATCAAGT+TGG - chr5_4:51301826-51301845 Msa0856530:intron 30.0%
AAAAACACCCAACTTGATTA+GGG + chr5_4:51301837-51301856 None:intergenic 30.0%
AACTTGGATAATACTCAGAA+TGG - chr5_4:51302028-51302047 Msa0856530:intron 30.0%
CAGATTCCTCAATGTTAAAA+TGG + chr5_4:51302084-51302103 None:intergenic 30.0%
! AACACACTTCAGGTTATATT+GGG + chr5_4:51302158-51302177 None:intergenic 30.0%
! TAACACACTTCAGGTTATAT+TGG + chr5_4:51302159-51302178 None:intergenic 30.0%
TAGGAAAAATAACACACTTC+AGG + chr5_4:51302168-51302187 None:intergenic 30.0%
CGTCTTATAGCTTACAATAT+TGG - chr5_4:51302457-51302476 Msa0856530:CDS 30.0%
CTTCATCAGCAAAACAAATA+AGG + chr5_4:51302518-51302537 None:intergenic 30.0%
! ATGCTTTTACTTGTGCTTTT+AGG - chr5_4:51302711-51302730 Msa0856530:intron 30.0%
! GTGCAAATTTGGTGAATATA+AGG + chr5_4:51302882-51302901 None:intergenic 30.0%
! CAAATAACTTTTCTCCTTGT+AGG - chr5_4:51303087-51303106 Msa0856530:intron 30.0%
! TTTTCAGAGAATGATTTTGC+TGG - chr5_4:51303287-51303306 Msa0856530:intron 30.0%
ATCATCGACAATAATGAGAA+CGG - chr5_4:51303344-51303363 Msa0856530:intron 30.0%
TTTCTGTTGGGAAAGAAAAA+AGG - chr5_4:51303506-51303525 Msa0856530:intron 30.0%
! TGAAGATCAAAATTTTCACC+GGG + chr5_4:51303537-51303556 None:intergenic 30.0%
AAAAGAAGTAATACGTCTAG+CGG - chr5_4:51303615-51303634 Msa0856530:intron 30.0%
! TATAACAGGAGTATGGATTT+AGG + chr5_4:51303665-51303684 None:intergenic 30.0%
ATAGTCTTCACTACTATAAC+AGG + chr5_4:51303679-51303698 None:intergenic 30.0%
GTTATAGTAGTGAAGACTAT+TGG - chr5_4:51303679-51303698 Msa0856530:intron 30.0%
! TTTGTTTGCAATTTTCGTCC+TGG - chr5_4:51294707-51294726 Msa0856530:three_prime_UTR 35.0%
!! TAAAAAGCATTGAACAGCGT+AGG + chr5_4:51294752-51294771 None:intergenic 35.0%
GAGTTCTATTGCATTTGTCT+CGG - chr5_4:51294978-51294997 Msa0856530:CDS 35.0%
!! GTGATTTTGTTTGGGATCTT+TGG - chr5_4:51295062-51295081 Msa0856530:CDS 35.0%
ATCAAGCATCAATCATCATG+AGG + chr5_4:51295143-51295162 None:intergenic 35.0%
AGAAATTCATCACCAATGCA+AGG + chr5_4:51295398-51295417 None:intergenic 35.0%
!! GCATTGGTGATGAATTTCTT+AGG - chr5_4:51295399-51295418 Msa0856530:intron 35.0%
! ATCACTTATCGATTGTCTTG+TGG - chr5_4:51295825-51295844 Msa0856530:intron 35.0%
AGTTGTGCTTGATACTTTGA+TGG - chr5_4:51295876-51295895 Msa0856530:intron 35.0%
!! GAGTTTGTTAAGGTTGCTAA+TGG - chr5_4:51295898-51295917 Msa0856530:intron 35.0%
TTTGTTAAGGTTGCTAATGG+TGG - chr5_4:51295901-51295920 Msa0856530:intron 35.0%
!!! TTTTTTGCTTAGCGCCTTTA+TGG - chr5_4:51296272-51296291 Msa0856530:CDS 35.0%
TTAGTAATGCTATAGCGTAG+CGG - chr5_4:51296353-51296372 Msa0856530:CDS 35.0%
AAATAGCATATCACGGATAG+CGG + chr5_4:51296403-51296422 None:intergenic 35.0%
AAAGCTCACAAGAAATTTGG+AGG - chr5_4:51296678-51296697 Msa0856530:intron 35.0%
AAGCTCACAAGAAATTTGGA+GGG - chr5_4:51296679-51296698 Msa0856530:intron 35.0%
!!! ATCGTCTGATTTTTCAAGAG+GGG + chr5_4:51297299-51297318 None:intergenic 35.0%
!!! GTATCGTCTGATTTTTCAAG+AGG + chr5_4:51297301-51297320 None:intergenic 35.0%
TTAGAAATGTGGAGTGTATC+AGG - chr5_4:51297328-51297347 Msa0856530:intron 35.0%
! GCTATAAAGCTGTCACTTAT+TGG + chr5_4:51297550-51297569 None:intergenic 35.0%
! ATCCCACATAAACAAGCTTT+TGG - chr5_4:51297591-51297610 Msa0856530:intron 35.0%
ATAGCTGATCCCACTTAAAT+AGG - chr5_4:51297672-51297691 Msa0856530:intron 35.0%
! ATCCCACTTAAATAGGCTTT+TGG - chr5_4:51297679-51297698 Msa0856530:intron 35.0%
TCATTAATGGGGAAAAAAGG+GGG + chr5_4:51297884-51297903 None:intergenic 35.0%
CTCATTAATGGGGAAAAAAG+GGG + chr5_4:51297885-51297904 None:intergenic 35.0%
CCTCATTAATGGGGAAAAAA+GGG + chr5_4:51297886-51297905 None:intergenic 35.0%
TCCTCATTAATGGGGAAAAA+AGG + chr5_4:51297887-51297906 None:intergenic 35.0%
GGATAAAAGGTCCTCATTAA+TGG + chr5_4:51297897-51297916 None:intergenic 35.0%
! TAATGAGGACCTTTTATCCT+TGG - chr5_4:51297898-51297917 Msa0856530:CDS 35.0%
GTATGGTTGCCATTATATTC+TGG - chr5_4:51298186-51298205 Msa0856530:intron 35.0%
GTGTAAACAGGAATGAATGT+AGG - chr5_4:51298477-51298496 Msa0856530:intron 35.0%
TATGTACAGTTGTATTCAGG+TGG + chr5_4:51298523-51298542 None:intergenic 35.0%
ACGTATGTACAGTTGTATTC+AGG + chr5_4:51298526-51298545 None:intergenic 35.0%
! AATGGATTTGACTTTGACCT+TGG + chr5_4:51298653-51298672 None:intergenic 35.0%
GTCAAAGTCAAATCCATTGT+TGG - chr5_4:51298655-51298674 Msa0856530:intron 35.0%
! ATCCATTGTTGGTCTATAGT+AGG - chr5_4:51298666-51298685 Msa0856530:intron 35.0%
TTCCTACTATAGACCAACAA+TGG + chr5_4:51298671-51298690 None:intergenic 35.0%
TAACCAAACATTTCTCCACT+TGG - chr5_4:51298792-51298811 Msa0856530:intron 35.0%
! CCCATCATGTATTTTGTCTA+AGG - chr5_4:51298852-51298871 Msa0856530:intron 35.0%
AAATGCAAAATCAAAAGGGG+GGG + chr5_4:51299054-51299073 None:intergenic 35.0%
TGTCTAATCCCATCATGTTA+TGG - chr5_4:51299124-51299143 Msa0856530:intron 35.0%
GGTGTTTACCATAACATGAT+GGG + chr5_4:51299135-51299154 None:intergenic 35.0%
AGGTGTTTACCATAACATGA+TGG + chr5_4:51299136-51299155 None:intergenic 35.0%
AATGTCAATTTCTGTAGCAC+AGG + chr5_4:51299156-51299175 None:intergenic 35.0%
! TGTTTTGCCATGAAGATAGA+TGG + chr5_4:51299363-51299382 None:intergenic 35.0%
! TTTTGCTTGATATTCCCCAT+TGG + chr5_4:51299448-51299467 None:intergenic 35.0%
GCAACATTAATATGCCAGTT+TGG - chr5_4:51299533-51299552 Msa0856530:intron 35.0%
TCCAACAATGCAACAAGAAT+AGG - chr5_4:51299606-51299625 Msa0856530:intron 35.0%
TCCTATTCTTGTTGCATTGT+TGG + chr5_4:51299610-51299629 None:intergenic 35.0%
! TTATTCTAGTTGGACCTGAT+TGG + chr5_4:51299747-51299766 None:intergenic 35.0%
CACAGCAGATTTATTCTAGT+TGG + chr5_4:51299757-51299776 None:intergenic 35.0%
!!! AAGTGTCATGTTTTTTGTCG+GGG - chr5_4:51299893-51299912 Msa0856530:intron 35.0%
ATTTCTATTTGGCGCATAGA+TGG - chr5_4:51299936-51299955 Msa0856530:intron 35.0%
TTATACCTCTCTTTGCTAAG+TGG - chr5_4:51300010-51300029 Msa0856530:intron 35.0%
TAACCGAGTAGTTTCTGTAA+TGG - chr5_4:51300066-51300085 Msa0856530:intron 35.0%
AACCGAGTAGTTTCTGTAAT+GGG - chr5_4:51300067-51300086 Msa0856530:intron 35.0%
TTCCCATTACAGAAACTACT+CGG + chr5_4:51300072-51300091 None:intergenic 35.0%
CTCCATAACATACAATGCTT+TGG + chr5_4:51300097-51300116 None:intergenic 35.0%
! TTATACCTCTCTTTTCGAAG+TGG - chr5_4:51300182-51300201 Msa0856530:intron 35.0%
CCCCAAAGAAATAGTGAATT+AGG - chr5_4:51300215-51300234 Msa0856530:CDS 35.0%
AGTGAATTAGGCTAATTGAG+TGG - chr5_4:51300227-51300246 Msa0856530:CDS 35.0%
GAAACAAGACTATCTTTACC+CGG + chr5_4:51300573-51300592 None:intergenic 35.0%
ACACTTGCATGTTTGTGATA+TGG - chr5_4:51300889-51300908 Msa0856530:intron 35.0%
ATTACAACATTAGCGAGAGT+TGG - chr5_4:51300977-51300996 Msa0856530:intron 35.0%
TTACAACATTAGCGAGAGTT+GGG - chr5_4:51300978-51300997 Msa0856530:intron 35.0%
AGCTCCTATAGTAGAAAAGA+TGG - chr5_4:51301003-51301022 Msa0856530:CDS 35.0%
AAACTAGATTTGGGTGGTTT+GGG - chr5_4:51301029-51301048 Msa0856530:CDS 35.0%
GGTAAAAAGAGTAGATCTGA+TGG - chr5_4:51301081-51301100 Msa0856530:CDS 35.0%
AAAAAGAGTAGATCTGATGG+AGG - chr5_4:51301084-51301103 Msa0856530:intron 35.0%
AAAAGAGTAGATCTGATGGA+GGG - chr5_4:51301085-51301104 Msa0856530:intron 35.0%
GGAAGACCTAGAAAAACTAT+AGG - chr5_4:51301130-51301149 Msa0856530:intron 35.0%
! GCTTCTCCTATAGTTTTTCT+AGG + chr5_4:51301139-51301158 None:intergenic 35.0%
GGATCTAGAGATTAATGAGT+TGG - chr5_4:51301168-51301187 Msa0856530:intron 35.0%
! TAATGAGTTGGAGAAAGACA+TGG - chr5_4:51301180-51301199 Msa0856530:intron 35.0%
!! CTGCAATATAATTCTGGCTT+AGG - chr5_4:51301420-51301439 Msa0856530:intron 35.0%
!! CAATATAATTCTGGCTTAGG+AGG - chr5_4:51301423-51301442 Msa0856530:intron 35.0%
AGTGACATCAGACAATATGA+CGG + chr5_4:51301704-51301723 None:intergenic 35.0%
CAAAAACACCCAACTTGATT+AGG + chr5_4:51301838-51301857 None:intergenic 35.0%
TCTCCAATTAAACGGAAAGA+AGG + chr5_4:51301934-51301953 None:intergenic 35.0%
CCTCAATGTTAAAATGGTCA+AGG + chr5_4:51302078-51302097 None:intergenic 35.0%
!! CCTTGACCATTTTAACATTG+AGG - chr5_4:51302075-51302094 Msa0856530:intron 35.0%
! TATTTTTCCTAAACCAGACC+AGG - chr5_4:51302177-51302196 Msa0856530:intron 35.0%
! ACAGTTTTCCAATTTTCTCC+TGG + chr5_4:51302198-51302217 None:intergenic 35.0%
ATACATATTGCGTGAGTAAG+AGG - chr5_4:51302264-51302283 Msa0856530:intron 35.0%
!!! ACGGTAAGTGTTTTGATCTT+TGG - chr5_4:51302606-51302625 Msa0856530:intron 35.0%
CAATGAAGGAAAGGAAAACA+AGG + chr5_4:51302641-51302660 None:intergenic 35.0%
! TTTAGGTTTGCTTTGTCTCT+TGG - chr5_4:51302728-51302747 Msa0856530:intron 35.0%
! TTAGGTTTGCTTTGTCTCTT+GGG - chr5_4:51302729-51302748 Msa0856530:intron 35.0%
GCTTCTTATGCAACAATACT+TGG - chr5_4:51302809-51302828 Msa0856530:intron 35.0%
TTATGCAACAATACTTGGAG+CGG - chr5_4:51302814-51302833 Msa0856530:intron 35.0%
!!! TGTTTTTAGTCGTTCATCAG+TGG - chr5_4:51303020-51303039 Msa0856530:intron 35.0%
ATACTCATCCTTGTATCTTC+TGG - chr5_4:51303183-51303202 Msa0856530:intron 35.0%
!! GTTGTTTTGTAGAATGCTAG+AGG + chr5_4:51303254-51303273 None:intergenic 35.0%
! ATCATTCTCTGAAAAGAGAG+AGG + chr5_4:51303282-51303301 None:intergenic 35.0%
TCATCGACAATAATGAGAAC+GGG - chr5_4:51303345-51303364 Msa0856530:intron 35.0%
! TCAATTCGTTGTCTTTTAGC+GGG + chr5_4:51303401-51303420 None:intergenic 35.0%
! CTCAATTCGTTGTCTTTTAG+CGG + chr5_4:51303402-51303421 None:intergenic 35.0%
! GAAGATCAAAATTTTCACCG+GGG + chr5_4:51303536-51303555 None:intergenic 35.0%
CTGCAGATACTTGAGATATA+TGG - chr5_4:51303564-51303583 Msa0856530:intron 35.0%
TCACTACTATAACAGGAGTA+TGG + chr5_4:51303672-51303691 None:intergenic 35.0%
AATAGCAAGACAGTTCAACC+AGG + chr5_4:51294728-51294747 None:intergenic 40.0%
!! CAATGCTTTTTACACCTCTG+TGG - chr5_4:51294760-51294779 Msa0856530:three_prime_UTR 40.0%
CAAACAAGACTTGGAATGCA+AGG + chr5_4:51295237-51295256 None:intergenic 40.0%
!! TGGGAAACCTTTGAAACATG+AGG - chr5_4:51295353-51295372 Msa0856530:intron 40.0%
GTCATATTCAAGCCTTGCAT+TGG - chr5_4:51295383-51295402 Msa0856530:intron 40.0%
CCACGTGAGGTAAATGAATT+TGG + chr5_4:51295776-51295795 None:intergenic 40.0%
CCAAATTCATTTACCTCACG+TGG - chr5_4:51295773-51295792 Msa0856530:CDS 40.0%
! ACTTATCGATTGTCTTGTGG+CGG - chr5_4:51295828-51295847 Msa0856530:intron 40.0%
TGAGAACTTCCCTTCCATAA+AGG + chr5_4:51296289-51296308 None:intergenic 40.0%
TTTATGGAAGGGAAGTTCTC+AGG - chr5_4:51296288-51296307 Msa0856530:CDS 40.0%
CACTATAGCACTGTTGCATA+GGG - chr5_4:51296453-51296472 Msa0856530:intron 40.0%
ACTATAGCACTGTTGCATAG+GGG - chr5_4:51296454-51296473 Msa0856530:intron 40.0%
TCATGAATCGTGTCATATGC+AGG - chr5_4:51296594-51296613 Msa0856530:intron 40.0%
CATGAATCGTGTCATATGCA+GGG - chr5_4:51296595-51296614 Msa0856530:intron 40.0%
TTGGAGGGAAAAGATGTTTC+AGG - chr5_4:51296694-51296713 Msa0856530:intron 40.0%
!! ACATCACCTACTTTTCTGCT+AGG - chr5_4:51297105-51297124 Msa0856530:intron 40.0%
CTAGTTTCAAAACTAGGACC+AGG + chr5_4:51297162-51297181 None:intergenic 40.0%
CATATTGTGGATGATGCACT+CGG + chr5_4:51297254-51297273 None:intergenic 40.0%
AAGAGGGGGAATATGTGATA+TGG + chr5_4:51297284-51297303 None:intergenic 40.0%
!!! TCGTCTGATTTTTCAAGAGG+GGG + chr5_4:51297298-51297317 None:intergenic 40.0%
!!! CCCTTTTTTCCCCATTAATG+AGG - chr5_4:51297883-51297902 Msa0856530:CDS 40.0%
CTTCATCTTCTTCGCAATTC+TGG + chr5_4:51298068-51298087 None:intergenic 40.0%
AAGCTTGGATTGCGTATCTT+AGG - chr5_4:51298101-51298120 Msa0856530:intron 40.0%
TTGAACACATCCAATGGAAG+TGG + chr5_4:51298130-51298149 None:intergenic 40.0%
TCCATTGGATGTGTTCAAAG+AGG - chr5_4:51298132-51298151 Msa0856530:intron 40.0%
ACCTCTTTGAACACATCCAA+TGG + chr5_4:51298136-51298155 None:intergenic 40.0%
! TTGGTAGTAGTCCTGAAATG+TGG - chr5_4:51298588-51298607 Msa0856530:intron 40.0%
! ATGATGGGATTAGACAGATG+AGG + chr5_4:51299120-51299139 None:intergenic 40.0%
TGTGCAGTGATTTCTTGACA+AGG - chr5_4:51299220-51299239 Msa0856530:CDS 40.0%
TTGACAAGGTCGTATGATGT+AGG - chr5_4:51299234-51299253 Msa0856530:CDS 40.0%
GCTGGGTCATTAGGATATAA+AGG + chr5_4:51299290-51299309 None:intergenic 40.0%
TATATCCTAATGACCCAGCA+TGG - chr5_4:51299291-51299310 Msa0856530:intron 40.0%
! TGATCAGGTCCAATTAGTCT+AGG - chr5_4:51299720-51299739 Msa0856530:intron 40.0%
CTGATTGGACCTAGACTAAT+TGG + chr5_4:51299732-51299751 None:intergenic 40.0%
! CAATTAGTCTAGGTCCAATC+AGG - chr5_4:51299730-51299749 Msa0856530:intron 40.0%
ATTTGGCGCATAGATGGATA+TGG - chr5_4:51299942-51299961 Msa0856530:intron 40.0%
ATGGATATGGAATGCGATTG+AGG - chr5_4:51299955-51299974 Msa0856530:intron 40.0%
ATTGTCCACTTCGAAAAGAG+AGG + chr5_4:51300190-51300209 None:intergenic 40.0%
GTAATAACCAATGCACCAGA+AGG + chr5_4:51300496-51300515 None:intergenic 40.0%
!! TGCATTGGTTATTACAGCTC+TGG - chr5_4:51300501-51300520 Msa0856530:intron 40.0%
ACATCCTTCGATCAACTGTT+TGG - chr5_4:51300543-51300562 Msa0856530:intron 40.0%
ATACGAAGTCAAGAGAACAG+AGG - chr5_4:51300671-51300690 Msa0856530:intron 40.0%
TACAACATTAGCGAGAGTTG+GGG - chr5_4:51300979-51300998 Msa0856530:intron 40.0%
TGGTAGAAACTAGATTTGGG+TGG - chr5_4:51301023-51301042 Msa0856530:CDS 40.0%
GAAACTAGATTTGGGTGGTT+TGG - chr5_4:51301028-51301047 Msa0856530:CDS 40.0%
! CTTTTTACCACAGAATCCAC+AGG + chr5_4:51301070-51301089 None:intergenic 40.0%
AGGTCAAATCACTAGAGGTA+GGG - chr5_4:51301108-51301127 Msa0856530:intron 40.0%
ATGTAGCGAACTCCACTTAT+TGG - chr5_4:51301236-51301255 Msa0856530:intron 40.0%
TGTAGCGAACTCCACTTATT+GGG - chr5_4:51301237-51301256 Msa0856530:intron 40.0%
GAACTCCACTTATTGGGTTA+AGG - chr5_4:51301243-51301262 Msa0856530:intron 40.0%
!! TCACTTTGAAACTCAGCTGT+TGG - chr5_4:51301367-51301386 Msa0856530:intron 40.0%
GTTGGATTGCAGATTTGTGT+AGG - chr5_4:51301385-51301404 Msa0856530:intron 40.0%
GGAAACATGGAGGATGTAAT+AGG - chr5_4:51301444-51301463 Msa0856530:CDS 40.0%
ATGTTGACAAATTGCAGCCA+TGG + chr5_4:51301539-51301558 None:intergenic 40.0%
GATAAGAGAAATGCAGGCAT+TGG - chr5_4:51301566-51301585 Msa0856530:intron 40.0%
CTACTGTCCGATCTCTTATA+TGG - chr5_4:51301625-51301644 Msa0856530:intron 40.0%
!! ATGTCACTATTGGTTCTGTC+TGG - chr5_4:51301716-51301735 Msa0856530:intron 40.0%
!! TGTCACTATTGGTTCTGTCT+GGG - chr5_4:51301717-51301736 Msa0856530:intron 40.0%
TGTTGGATGAAGCAAGATGT+TGG + chr5_4:51301757-51301776 None:intergenic 40.0%
CCAATTAAACGGAAAGAAGG+CGG + chr5_4:51301931-51301950 None:intergenic 40.0%
GAATCTGATCCTATGAAGTC+AGG - chr5_4:51302097-51302116 Msa0856530:intron 40.0%
!! ATTTTCTCCTGGTCTGGTTT+AGG + chr5_4:51302187-51302206 None:intergenic 40.0%
AAACCAGACCAGGAGAAAAT+TGG - chr5_4:51302187-51302206 Msa0856530:intron 40.0%
! TTTCCAATTTTCTCCTGGTC+TGG + chr5_4:51302193-51302212 None:intergenic 40.0%
GCAAGCATGCATTCATGTAA+GGG + chr5_4:51302372-51302391 None:intergenic 40.0%
AGCAAGCATGCATTCATGTA+AGG + chr5_4:51302373-51302392 None:intergenic 40.0%
CTGATGAAGATTTCTTGAGC+AGG - chr5_4:51302529-51302548 Msa0856530:CDS 40.0%
CGTTCATCAGTGGCTTATTA+AGG - chr5_4:51303030-51303049 Msa0856530:intron 40.0%
TTGCACCATTGCAGATTACA+CGG - chr5_4:51303213-51303232 Msa0856530:intron 40.0%
! TTCTCTGAAAAGAGAGAGGA+TGG + chr5_4:51303278-51303297 None:intergenic 40.0%
! CAGAGAATGATTTTGCTGGT+TGG - chr5_4:51303291-51303310 Msa0856530:intron 40.0%
CATCGACAATAATGAGAACG+GGG - chr5_4:51303346-51303365 Msa0856530:intron 40.0%
GAACGGGGCTAAAGATTTAT+TGG - chr5_4:51303361-51303380 Msa0856530:intron 40.0%
GGCTAAAGATTTATTGGACC+AGG - chr5_4:51303367-51303386 Msa0856530:intron 40.0%
! CAATTCGTTGTCTTTTAGCG+GGG + chr5_4:51303400-51303419 None:intergenic 40.0%
!! GCAAAACGGGTTATTGGACT+GGG + chr5_4:51294628-51294647 None:intergenic 45.0%
!! AGCAAGGCAAAACGGGTTAT+TGG + chr5_4:51294634-51294653 None:intergenic 45.0%
! GTAATGGAGCAAGGCAAAAC+GGG + chr5_4:51294641-51294660 None:intergenic 45.0%
!! GGTAATGGAGCAAGGCAAAA+CGG + chr5_4:51294642-51294661 None:intergenic 45.0%
ATCATCATGAGGCCAAGCAT+TGG + chr5_4:51295132-51295151 None:intergenic 45.0%
!! TGGAATGCAAGGCATTGTCA+AGG + chr5_4:51295226-51295245 None:intergenic 45.0%
!! AGAGAATCGATTCGAGGATG+TGG + chr5_4:51295666-51295685 None:intergenic 45.0%
!! GAAGAGAGAGAATCGATTCG+AGG + chr5_4:51295672-51295691 None:intergenic 45.0%
TTTGGATTGATCGGAACCAG+AGG + chr5_4:51295758-51295777 None:intergenic 45.0%
GAAACTCGTCGAACTTCGAA+CGG + chr5_4:51295801-51295820 None:intergenic 45.0%
TTGCTTAGCGCCTTTATGGA+AGG - chr5_4:51296276-51296295 Msa0856530:CDS 45.0%
TGCTTAGCGCCTTTATGGAA+GGG - chr5_4:51296277-51296296 Msa0856530:CDS 45.0%
GCACTATAGCACTGTTGCAT+AGG - chr5_4:51296452-51296471 Msa0856530:intron 45.0%
CAATCTGCGTTTGACAACAG+TGG - chr5_4:51296502-51296521 Msa0856530:intron 45.0%
! ACAGTGGTCAGCGTGTTATT+TGG - chr5_4:51296518-51296537 Msa0856530:intron 45.0%
GATAAAACTGCAAGCGCAGA+TGG - chr5_4:51296858-51296877 Msa0856530:intron 45.0%
GTTAGTAAGACTCTAGCCAG+TGG - chr5_4:51296908-51296927 Msa0856530:intron 45.0%
GAGAAGAAGATGACCATAGC+TGG - chr5_4:51296963-51296982 Msa0856530:intron 45.0%
GTTCTGCCTAGCAGAAAAGT+AGG + chr5_4:51297114-51297133 None:intergenic 45.0%
! ATTTTTCTGCTAGGCAGACC+TGG - chr5_4:51297141-51297160 Msa0856530:intron 45.0%
GGGAGCAACATTAACGAGTA+CGG + chr5_4:51297864-51297883 None:intergenic 45.0%
! TCTTAGGTTGCCACTTCCAT+TGG - chr5_4:51298117-51298136 Msa0856530:intron 45.0%
TGCTATTAAAGCCCCTGTCA+TGG - chr5_4:51298620-51298639 Msa0856530:intron 45.0%
CCAAACATTTCTCCACTTGG+CGG - chr5_4:51298795-51298814 Msa0856530:intron 45.0%
CAAACATTTCTCCACTTGGC+GGG - chr5_4:51298796-51298815 Msa0856530:intron 45.0%
AAACATTTCTCCACTTGGCG+GGG - chr5_4:51298797-51298816 Msa0856530:intron 45.0%
ACAGATGAGGAATCACTGCT+TGG + chr5_4:51299107-51299126 None:intergenic 45.0%
ACAAGGTCGTATGATGTAGG+TGG - chr5_4:51299237-51299256 Msa0856530:CDS 45.0%
TGGGTATTCCAATCCATGCT+GGG + chr5_4:51299307-51299326 None:intergenic 45.0%
TTGGGTATTCCAATCCATGC+TGG + chr5_4:51299308-51299327 None:intergenic 45.0%
TCATGGCAAAACATCGTGCA+AGG - chr5_4:51299370-51299389 Msa0856530:intron 45.0%
! ACATCGTGCAAGGTTTTTCC+AGG - chr5_4:51299380-51299399 Msa0856530:intron 45.0%
!!! TGTCATGTTTTTTGTCGGGG+AGG - chr5_4:51299896-51299915 Msa0856530:intron 45.0%
!!! GTCATGTTTTTTGTCGGGGA+GGG - chr5_4:51299897-51299916 Msa0856530:intron 45.0%
CATGTCCACTTAGCAAAGAG+AGG + chr5_4:51300018-51300037 None:intergenic 45.0%
CTCTCTTTGCTAAGTGGACA+TGG - chr5_4:51300016-51300035 Msa0856530:intron 45.0%
TTGCTTTCAGTTCCACCTTC+TGG - chr5_4:51300478-51300497 Msa0856530:intron 45.0%
ATAACCAATGCACCAGAAGG+TGG + chr5_4:51300493-51300512 None:intergenic 45.0%
TGCACCAAACAGTTGATCGA+AGG + chr5_4:51300550-51300569 None:intergenic 45.0%
GAGGTCAAATCACTAGAGGT+AGG - chr5_4:51301107-51301126 Msa0856530:intron 45.0%
GGTCAAATCACTAGAGGTAG+GGG - chr5_4:51301109-51301128 Msa0856530:intron 45.0%
CCAAGCCTTAACCCAATAAG+TGG + chr5_4:51301251-51301270 None:intergenic 45.0%
CCACTTATTGGGTTAAGGCT+TGG - chr5_4:51301248-51301267 Msa0856530:intron 45.0%
AGGTTTCTATTGGTAGAGCC+AGG - chr5_4:51301303-51301322 Msa0856530:intron 45.0%
TATTGGTAGAGCCAGGAGAT+TGG - chr5_4:51301310-51301329 Msa0856530:intron 45.0%
TTGGTTGGATTCCTGGTTCA+AGG - chr5_4:51301329-51301348 Msa0856530:intron 45.0%
TTGGATTCCTGGTTCAAGGA+TGG - chr5_4:51301333-51301352 Msa0856530:intron 45.0%
CCTTAAACCATCCTTGAACC+AGG + chr5_4:51301343-51301362 None:intergenic 45.0%
CCTGGTTCAAGGATGGTTTA+AGG - chr5_4:51301340-51301359 Msa0856530:intron 45.0%
GGTTCAAGGATGGTTTAAGG+TGG - chr5_4:51301343-51301362 Msa0856530:intron 45.0%
!! TTCTGGCTTAGGAGGAAACA+TGG - chr5_4:51301431-51301450 Msa0856530:intron 45.0%
ATCAGCACTGCCATAATCCA+TGG - chr5_4:51301503-51301522 Msa0856530:intron 45.0%
TTGACAAATTGCAGCCATGG+TGG + chr5_4:51301536-51301555 None:intergenic 45.0%
CCGCCTTCTTTCCGTTTAAT+TGG - chr5_4:51301928-51301947 Msa0856530:intron 45.0%
CGAAGAGACTGCTTCTAACT+TGG - chr5_4:51302012-51302031 Msa0856530:intron 45.0%
AATGGTCAAGGCCTGATTTC+TGG + chr5_4:51302066-51302085 None:intergenic 45.0%
TTGAGCAGGAAGCTCTCTTT+GGG - chr5_4:51302543-51302562 Msa0856530:CDS 45.0%
CAAAACACTTACCGTGAGAC+AGG + chr5_4:51302601-51302620 None:intergenic 45.0%
AGTCGTCACCAGAAGATACA+AGG + chr5_4:51303194-51303213 None:intergenic 45.0%
ACCATTGCAGATTACACGGA+GGG - chr5_4:51303217-51303236 Msa0856530:intron 45.0%
! GAAAGAAAAAAGGCATGCCC+CGG - chr5_4:51303516-51303535 Msa0856530:intron 45.0%
AGAAGTAATACGTCTAGCGG+AGG - chr5_4:51303618-51303637 Msa0856530:intron 45.0%
GAAGTAATACGTCTAGCGGA+GGG - chr5_4:51303619-51303638 Msa0856530:intron 45.0%
!! TTAAAAAAAATCATATAAAA+AGG + chr5_4:51296178-51296197 None:intergenic 5.0%
!! GGCAAAACGGGTTATTGGAC+TGG + chr5_4:51294629-51294648 None:intergenic 50.0%
TTGCCTTGCTCCATTACCCA+TGG - chr5_4:51294644-51294663 Msa0856530:three_prime_UTR 50.0%
!! GATCCATGGGTAATGGAGCA+AGG + chr5_4:51294650-51294669 None:intergenic 50.0%
! ATCCGACCCGTTTTCCATCT+GGG - chr5_4:51294667-51294686 Msa0856530:three_prime_UTR 50.0%
!!! AGGAGTTTTAGAGGCCACAG+AGG + chr5_4:51294777-51294796 None:intergenic 50.0%
TGTGGTGAGGTGGAGAAGAA+GGG + chr5_4:51295648-51295667 None:intergenic 50.0%
ATGTGGTGAGGTGGAGAAGA+AGG + chr5_4:51295649-51295668 None:intergenic 50.0%
!! ATCGATTCGAGGATGTGGTG+AGG + chr5_4:51295661-51295680 None:intergenic 50.0%
!! GTGGTCAGCGTGTTATTTGG+TGG - chr5_4:51296521-51296540 Msa0856530:intron 50.0%
ATTAAAGCCCCTGTCATGGC+AGG - chr5_4:51298624-51298643 Msa0856530:intron 50.0%
TTAAAGCCCCTGTCATGGCA+GGG - chr5_4:51298625-51298644 Msa0856530:intron 50.0%
AGTAGGAACCTGTGACCTTC+TGG - chr5_4:51298683-51298702 Msa0856530:intron 50.0%
TTGTGTGACCAGAAGGTCAC+AGG + chr5_4:51298694-51298713 None:intergenic 50.0%
CCGCCAAGTGGAGAAATGTT+TGG + chr5_4:51298798-51298817 None:intergenic 50.0%
! GAGGAATCACTGCTTGGTGA+AGG + chr5_4:51299101-51299120 None:intergenic 50.0%
CCAATCCATGCTGGGTCATT+AGG + chr5_4:51299299-51299318 None:intergenic 50.0%
CCTAATGACCCAGCATGGAT+TGG - chr5_4:51299296-51299315 Msa0856530:intron 50.0%
CTGGAAGAAGGGGTGACTTT+AGG + chr5_4:51300417-51300436 None:intergenic 50.0%
AGCCAGGTAAGCTGGAAGAA+GGG + chr5_4:51300428-51300447 None:intergenic 50.0%
TCTTTGCAAATGAGGCAGCC+AGG + chr5_4:51300444-51300463 None:intergenic 50.0%
AGTTCCACCTTCTGGTGCAT+TGG - chr5_4:51300486-51300505 Msa0856530:intron 50.0%
!! CGATCAACTGTTTGGTGCAC+CGG - chr5_4:51300551-51300570 Msa0856530:intron 50.0%
!! GATCAACTGTTTGGTGCACC+GGG - chr5_4:51300552-51300571 Msa0856530:intron 50.0%
GCATGTAGAGAGAAGACCTG+TGG - chr5_4:51301051-51301070 Msa0856530:CDS 50.0%
GAGAAGACCTGTGGATTCTG+TGG - chr5_4:51301060-51301079 Msa0856530:CDS 50.0%
AGAGTAGATCTGATGGAGGG+AGG - chr5_4:51301088-51301107 Msa0856530:intron 50.0%
GAGGGAGGTCAAATCACTAG+AGG - chr5_4:51301103-51301122 Msa0856530:intron 50.0%
CAGGAATCCAACCAATCTCC+TGG + chr5_4:51301324-51301343 None:intergenic 50.0%
! CAGGAGATTGGTTGGATTCC+TGG - chr5_4:51301322-51301341 Msa0856530:intron 50.0%
TGGCTTAGGAGGAAACATGG+AGG - chr5_4:51301434-51301453 Msa0856530:intron 50.0%
GGAGGATGTAATAGGCTCTG+TGG - chr5_4:51301452-51301471 Msa0856530:CDS 50.0%
GTAATAGGCTCTGTGGCCTA+TGG - chr5_4:51301459-51301478 Msa0856530:CDS 50.0%
! TGGCATGGCACCATGGATTA+TGG + chr5_4:51301516-51301535 None:intergenic 50.0%
AAATTGCAGCCATGGTGGCA+TGG + chr5_4:51301531-51301550 None:intergenic 50.0%
GCAAAGCTCTGCCAGAAATC+AGG - chr5_4:51302052-51302071 Msa0856530:intron 50.0%
CTCATAGCGCCTGACTTCAT+AGG + chr5_4:51302109-51302128 None:intergenic 50.0%
CTTGAGCAGGAAGCTCTCTT+TGG - chr5_4:51302542-51302561 Msa0856530:CDS 50.0%
ACTACTGTCCTCCTGTCTCA+CGG - chr5_4:51302587-51302606 Msa0856530:intron 50.0%
AACACTTACCGTGAGACAGG+AGG + chr5_4:51302598-51302617 None:intergenic 50.0%
TGCAACAATACTTGGAGCGG+AGG - chr5_4:51302817-51302836 Msa0856530:intron 50.0%
CACCATTGCAGATTACACGG+AGG - chr5_4:51303216-51303235 Msa0856530:intron 50.0%
ACCCTCCGTGTAATCTGCAA+TGG + chr5_4:51303221-51303240 None:intergenic 50.0%
GGAAAACGGGTCGGATCCAT+GGG + chr5_4:51294663-51294682 None:intergenic 55.0%
TGGAAAACGGGTCGGATCCA+TGG + chr5_4:51294664-51294683 None:intergenic 55.0%
! GATCCGACCCGTTTTCCATC+TGG - chr5_4:51294666-51294685 Msa0856530:three_prime_UTR 55.0%
GTCCCAGATGGAAAACGGGT+CGG + chr5_4:51294672-51294691 None:intergenic 55.0%
!! ACCCGTTTTCCATCTGGGAC+TGG - chr5_4:51294672-51294691 Msa0856530:three_prime_UTR 55.0%
CCCAGTCCCAGATGGAAAAC+GGG + chr5_4:51294676-51294695 None:intergenic 55.0%
!! CCCGTTTTCCATCTGGGACT+GGG - chr5_4:51294673-51294692 Msa0856530:three_prime_UTR 55.0%
GCCCAGTCCCAGATGGAAAA+CGG + chr5_4:51294677-51294696 None:intergenic 55.0%
! TTTCCATCTGGGACTGGGCT+TGG - chr5_4:51294678-51294697 Msa0856530:three_prime_UTR 55.0%
! TTCCATCTGGGACTGGGCTT+GGG - chr5_4:51294679-51294698 Msa0856530:three_prime_UTR 55.0%
GTGGTGAGGTGGAGAAGAAG+GGG + chr5_4:51295647-51295666 None:intergenic 55.0%
GATTCGAGGATGTGGTGAGG+TGG + chr5_4:51295658-51295677 None:intergenic 55.0%
AAGGGAGTTGAGGGAGGAGA+GGG + chr5_4:51295708-51295727 None:intergenic 55.0%
GGATTGATCGGAACCAGAGG+AGG + chr5_4:51295755-51295774 None:intergenic 55.0%
TTGGAACCCTGCCATGACAG+GGG + chr5_4:51298634-51298653 None:intergenic 55.0%
CTTGGAACCCTGCCATGACA+GGG + chr5_4:51298635-51298654 None:intergenic 55.0%
GGGGCTATTGTGTGACCAGA+AGG + chr5_4:51298701-51298720 None:intergenic 55.0%
ATTTCTCCACTTGGCGGGGT+TGG - chr5_4:51298801-51298820 Msa0856530:intron 55.0%
ACCCCTTCTTCCAGCTTACC+TGG - chr5_4:51300423-51300442 Msa0856530:intron 55.0%
GCCAGGTAAGCTGGAAGAAG+GGG + chr5_4:51300427-51300446 None:intergenic 55.0%
CAGCCAGGTAAGCTGGAAGA+AGG + chr5_4:51300429-51300448 None:intergenic 55.0%
AATGAGGCAGCCAGGTAAGC+TGG + chr5_4:51300436-51300455 None:intergenic 55.0%
GGTAGAGCCAGGAGATTGGT+TGG - chr5_4:51301314-51301333 Msa0856530:intron 55.0%
AGACAGGAGGACAGTAGTGG+TGG + chr5_4:51302585-51302604 None:intergenic 55.0%
GTGAGACAGGAGGACAGTAG+TGG + chr5_4:51302588-51302607 None:intergenic 55.0%
GATTACACGGAGGGTGAAGC+AGG - chr5_4:51303226-51303245 Msa0856530:intron 55.0%
! TTTTAGCGGGGCTGTGTTCC+TGG + chr5_4:51303388-51303407 None:intergenic 55.0%
CGGGTCGGATCCATGGGTAA+TGG + chr5_4:51294657-51294676 None:intergenic 60.0%
AGGGAGGAGAGGGAGGAAGA+AGG + chr5_4:51295698-51295717 None:intergenic 60.0%
GAAGGGAGTTGAGGGAGGAG+AGG + chr5_4:51295709-51295728 None:intergenic 60.0%
ATCGGAACCAGAGGAGGAGC+TGG + chr5_4:51295749-51295768 None:intergenic 60.0%
ACTTCGAACGGAGCCACGTG+AGG + chr5_4:51295789-51295808 None:intergenic 60.0%
CCTTGGAACCCTGCCATGAC+AGG + chr5_4:51298636-51298655 None:intergenic 60.0%
CCTGTCATGGCAGGGTTCCA+AGG - chr5_4:51298633-51298652 Msa0856530:intron 60.0%
ATGTAGCCAACCCCGCCAAG+TGG + chr5_4:51298810-51298829 None:intergenic 60.0%
!! ACTTGGCGGGGTTGGCTACA+TGG - chr5_4:51298809-51298828 Msa0856530:intron 60.0%
GCTCTGTGGCCTATGGAAGC+TGG - chr5_4:51301466-51301485 Msa0856530:CDS 60.0%
GCCTATGGAAGCTGGAAGCC+TGG - chr5_4:51301474-51301493 Msa0856530:CDS 60.0%
GCCAGGCTTCCAGCTTCCAT+AGG + chr5_4:51301478-51301497 None:intergenic 60.0%
!! GGCAGTGCTGATTCTGTGCC+AGG + chr5_4:51301495-51301514 None:intergenic 60.0%
!! TCCATGGTGCCATGCCACCA+TGG - chr5_4:51301519-51301538 Msa0856530:intron 60.0%
GGAGTTGAGGGAGGAGAGGG+AGG + chr5_4:51295705-51295724 None:intergenic 65.0%
TGGCGGAAGGGAGTTGAGGG+AGG + chr5_4:51295714-51295733 None:intergenic 65.0%
!! CGGTGGCGGAAGGGAGTTGA+GGG + chr5_4:51295717-51295736 None:intergenic 65.0%
!! TGGTGGTTGCGGTGGCGGAA+GGG + chr5_4:51295726-51295745 None:intergenic 65.0%
!! GGAGGAGCTGGTGGTGGTTG+CGG + chr5_4:51295737-51295756 None:intergenic 65.0%
ACCACCACCAGCTCCTCCTC+TGG - chr5_4:51295739-51295758 Msa0856530:intron 65.0%
ACCAGAGGAGGAGCTGGTGG+TGG + chr5_4:51295743-51295762 None:intergenic 65.0%
GGAACCAGAGGAGGAGCTGG+TGG + chr5_4:51295746-51295765 None:intergenic 65.0%
GCCATGGTGGCATGGCACCA+TGG + chr5_4:51301523-51301542 None:intergenic 65.0%
GGCCCAAGCCCAGTCCCAGA+TGG + chr5_4:51294684-51294703 None:intergenic 70.0%
!! GCGGTGGCGGAAGGGAGTTG+AGG + chr5_4:51295718-51295737 None:intergenic 70.0%
!! GTGGTGGTTGCGGTGGCGGA+AGG + chr5_4:51295727-51295746 None:intergenic 70.0%
!! GCTGGTGGTGGTTGCGGTGG+CGG + chr5_4:51295731-51295750 None:intergenic 70.0%
!! GGAGCTGGTGGTGGTTGCGG+TGG + chr5_4:51295734-51295753 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 51294572 51303779 51294572 ID=Msa0856530;Name=Msa0856530
chr5_4 mRNA 51294572 51303779 51294572 ID=Msa0856530-mRNA-1;Parent=Msa0856530;Name=Msa0856530-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.85|0.8|0.93|0.85|0.8|15|349|528
chr5_4 exon 51294572 51295124 51294572 ID=Msa0856530-mRNA-1:exon:16042;Parent=Msa0856530-mRNA-1
chr5_4 exon 51295513 51295618 51295513 ID=Msa0856530-mRNA-1:exon:16041;Parent=Msa0856530-mRNA-1
chr5_4 exon 51295743 51295800 51295743 ID=Msa0856530-mRNA-1:exon:16040;Parent=Msa0856530-mRNA-1
chr5_4 exon 51296224 51296374 51296224 ID=Msa0856530-mRNA-1:exon:16039;Parent=Msa0856530-mRNA-1
chr5_4 exon 51297778 51297951 51297778 ID=Msa0856530-mRNA-1:exon:16038;Parent=Msa0856530-mRNA-1
chr5_4 exon 51298950 51299124 51298950 ID=Msa0856530-mRNA-1:exon:16037;Parent=Msa0856530-mRNA-1
chr5_4 exon 51299212 51299264 51299212 ID=Msa0856530-mRNA-1:exon:16036;Parent=Msa0856530-mRNA-1
chr5_4 exon 51300198 51300299 51300198 ID=Msa0856530-mRNA-1:exon:16035;Parent=Msa0856530-mRNA-1
chr5_4 exon 51300503 51300552 51300503 ID=Msa0856530-mRNA-1:exon:16034;Parent=Msa0856530-mRNA-1
chr5_4 exon 51301002 51301102 51301002 ID=Msa0856530-mRNA-1:exon:16033;Parent=Msa0856530-mRNA-1
chr5_4 exon 51301444 51301495 51301444 ID=Msa0856530-mRNA-1:exon:16032;Parent=Msa0856530-mRNA-1
chr5_4 exon 51301636 51301697 51301636 ID=Msa0856530-mRNA-1:exon:16031;Parent=Msa0856530-mRNA-1
chr5_4 exon 51302194 51302267 51302194 ID=Msa0856530-mRNA-1:exon:16030;Parent=Msa0856530-mRNA-1
chr5_4 exon 51302385 51302601 51302385 ID=Msa0856530-mRNA-1:exon:16029;Parent=Msa0856530-mRNA-1
chr5_4 exon 51303772 51303779 51303772 ID=Msa0856530-mRNA-1:exon:16028;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51303772 51303779 51303772 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51302385 51302601 51302385 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51302194 51302267 51302194 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51301636 51301697 51301636 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51301444 51301495 51301444 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51301002 51301102 51301002 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51300503 51300552 51300503 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51300198 51300299 51300198 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51299212 51299264 51299212 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51298950 51299124 51298950 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51297778 51297951 51297778 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51296224 51296374 51296224 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51295743 51295800 51295743 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51295513 51295618 51295513 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 CDS 51294921 51295124 51294921 ID=Msa0856530-mRNA-1:cds;Parent=Msa0856530-mRNA-1
chr5_4 three_prime_UTR 51294572 51294920 51294572 ID=Msa0856530-mRNA-1:three_prime_utr;Parent=Msa0856530-mRNA-1
Gene Sequence

>Msa0856530

ATGAATTTCTCCTCCTCTGGTTCCGATCAATCCAAATTCATTTACCTCACGTGGCTCCGTTCGAAGTTCGACGAGTTTCTCAAATCACTTATCGATTGTCTTGTGGCGGATGAATGCGATGAAACTATTAAGGAAGTTGTGCTTGATACTTTGATGGAGTTTGTTAAGGTTGCTAATGGTGGAGCATTTCATTCTTCATTATATAACAGAATTCTCCGTAGTATTATTCACTCTACTAGTTCTGCTGAATTTTTGATTGATTTACTAATATCGAAGTATTTCAAGTATATTGATGTTCGTTATTTTACATTCATAAGCCTAGAAAAGCTCACAAGAAATTTGGAGGGAAAAGATGTTTCAGATGATAAAACTGCAAGCGCAGATGGCACCAATGAAAGTCAATTAAGCTCAAGTACCGAGTGCATCATCCACAATATGTACTACACCATATCACATATTCCCCCTCTTGAAAAATCAGACGATACATCTGATTTAGAAATGTGGAGTGTATCAGATGTGGATGCAGATGATAAGCAGCTTAAGTCCAAGAAACGTAACAATAATGTATTGTCTGCAGCCAGAATTGCGAAGAAGATGAAGTTAAAATTTACTAAAGCTTGGATTGCGTATCTTAGGTTGCCACTTCCATTGGATGTGTTCAAAGAGGTTCTTGTAAACCTTCACCAAGCAGTGATTCCTCATCTGTCTAATCCCATCATTGATTTCTTGACAAGGTCGTATGATGTAGGTGGTGTAGTCAGCGTGATGGCTCTTAATAGCCTTTATATCCTAATGACCCAGCATGGATTGGAATACCCAAAATTTTATGAAAAACTCTATGCACTATTAGTTCCATCTATCTTCATGGCAAAACATCGTGCAAGGTTTTTCCAGCTTCTTGATTCTTGCCTAAAGTCACCCCTTCTTCCAGCTTACCTGGCTGCCTCATTTGCAAAGAAATTGAGTAGGCTGTTGCTTTCAGTTCCACCTTCTGGTGCATTGGTTATTACAGCTCTGGTTCACAATATTTTGCGTAGACATCCTTCGATCAACTGTTTGGTGCACCGGGAAGAAGTTAATGAAGACACTGAACAAAGAACAGACGAAGAGACTGCTTCTAACTTGGATAATACTCAGAATGGTGCAAAGCTCTGCCAGAAATCAGGCCTTGACCATTTTAACATTGAGGAATCTGATCCTATGAAGTCAGGCGCTATGAGAAGCTCTCTTTGGGAAATTGATACTGCTCTCCACCACTACTGTCCTCCTGTCTCACGGTTTGCTTTGTCTCTTGGGACTGATTTGACAGTCAGAGCAAAAACAAGCGAAGTTAATATTGGTGATTTTAGTGCTGCTTCTTATGCAACAATACTTGGAGCGGAGATTACACGGAGGGTGAAGCAGGTTCCTCTAGCATTCTACAAAACAACTCCATCCTCTCTCTTTTCAGAGAATGATTTTGCTGGTTGGACTTTCAAATGTGAAGAAAATTCTGAAACGATCATCGACAATAATGAGAACGGGGCTAAAGATTTATTGGACCAGGAACACAGCCCCGCTAAAAGACAACGAATTGAGTGTCAGTGA

Protein sequence

>Msa0856530

MNFSSSGSDQSKFIYLTWLRSKFDEFLKSLIDCLVADECDETIKEVVLDTLMEFVKVANGGAFHSSLYNRILRSIIHSTSSAEFLIDLLISKYFKYIDVRYFTFISLEKLTRNLEGKDVSDDKTASADGTNESQLSSSTECIIHNMYYTISHIPPLEKSDDTSDLEMWSVSDVDADDKQLKSKKRNNNVLSAARIAKKMKLKFTKAWIAYLRLPLPLDVFKEVLVNLHQAVIPHLSNPIIDFLTRSYDVGGVVSVMALNSLYILMTQHGLEYPKFYEKLYALLVPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALVHNILRRHPSINCLVHREEVNEDTEQRTDEETASNLDNTQNGAKLCQKSGLDHFNIEESDPMKSGAMRSSLWEIDTALHHYCPPVSRFALSLGTDLTVRAKTSEVNIGDFSAASYATILGAEITRRVKQVPLAFYKTTPSSLFSENDFAGWTFKCEENSETIIDNNENGAKDLLDQEHSPAKRQRIECQ*