AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0822470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0822470 MtrunA17_Chr5g0442771 93.248 311 19 2 1 309 1 311 0.0 607
Msa0822470 MtrunA17_Chr2g0311651 54.915 295 119 10 14 298 18 308 9.68e-96 285
Msa0822470 MtrunA17_Chr2g0311661 52.055 292 112 8 14 298 17 287 2.64e-91 273
Msa0822470 MtrunA17_Chr5g0417001 66.860 172 55 2 10 181 6 175 6.87e-78 242
Msa0822470 MtrunA17_Chr8g0361731 64.671 167 58 1 12 178 8 173 2.35e-76 238
Msa0822470 MtrunA17_Chr6g0453131 58.564 181 64 2 1 181 7 176 3.44e-71 225
Msa0822470 MtrunA17_Chr4g0076731 53.333 165 64 3 14 178 50 201 1.74e-54 183
Msa0822470 MtrunA17_Chr2g0326361 49.724 181 85 3 20 200 16 190 5.15e-53 176
Msa0822470 MtrunA17_Chr2g0318101 47.191 178 87 4 20 193 17 191 3.14e-52 175
Msa0822470 MtrunA17_Chr3g0124761 53.459 159 64 3 20 178 9 157 7.92e-52 172
Msa0822470 MtrunA17_Chr4g0047841 48.000 175 72 3 20 178 17 188 1.04e-51 173
Msa0822470 MtrunA17_Chr7g0252971 49.091 165 73 2 20 178 10 169 1.97e-51 172
Msa0822470 MtrunA17_Chr8g0384721 42.424 231 86 6 20 246 9 196 2.09e-51 171
Msa0822470 MtrunA17_Chr7g0263931 48.851 174 82 5 9 181 1 168 5.57e-50 168
Msa0822470 MtrunA17_Chr5g0417791 50.314 159 71 2 20 178 5 155 2.06e-49 165
Msa0822470 MtrunA17_Chr2g0318081 49.704 169 73 2 20 188 18 174 2.48e-49 167
Msa0822470 MtrunA17_Chr4g0042561 50.943 159 70 3 20 178 11 161 1.96e-48 162
Msa0822470 MtrunA17_Chr3g0130731 47.429 175 78 4 20 190 9 173 5.12e-48 162
Msa0822470 MtrunA17_Chr7g0214071 49.738 191 79 6 12 200 8 183 9.60e-48 160
Msa0822470 MtrunA17_Chr4g0018391 43.889 180 79 4 18 194 7 167 3.08e-47 162
Msa0822470 MtrunA17_Chr4g0060931 44.262 183 90 3 2 184 3 173 4.55e-47 162
Msa0822470 MtrunA17_Chr8g0359921 49.405 168 75 2 20 187 16 173 6.43e-47 160
Msa0822470 MtrunA17_Chr4g0038751 45.556 180 84 3 15 194 12 177 7.96e-47 159
Msa0822470 MtrunA17_Chr3g0091921 47.126 174 81 3 12 184 9 172 1.50e-46 159
Msa0822470 MtrunA17_Chr8g0372121 36.620 284 148 11 15 293 3 259 2.12e-46 159
Msa0822470 MtrunA17_Chr2g0316971 47.561 164 78 3 15 178 20 175 4.15e-46 160
Msa0822470 MtrunA17_Chr5g0398971 37.751 249 130 7 18 261 7 235 6.23e-46 158
Msa0822470 MtrunA17_Chr7g0253011 47.458 177 83 3 11 184 8 177 8.24e-46 159
Msa0822470 MtrunA17_Chr4g0056541 45.732 164 72 3 18 178 7 156 2.14e-45 157
Msa0822470 MtrunA17_Chr6g0453451 45.946 185 89 4 1 184 2 176 8.56e-45 155
Msa0822470 MtrunA17_Chr5g0405211 43.713 167 77 3 15 178 5 157 2.44e-44 154
Msa0822470 MtrunA17_Chr3g0139331 41.053 190 100 2 14 203 7 184 4.27e-44 154
Msa0822470 MtrunA17_Chr3g0109821 50.311 161 67 5 20 178 8 157 4.98e-44 159
Msa0822470 MtrunA17_Chr6g0481091 45.963 161 73 3 20 178 8 156 6.61e-44 150
Msa0822470 MtrunA17_Chr4g0017921 43.902 164 74 3 18 178 8 156 7.23e-43 150
Msa0822470 MtrunA17_Chr8g0346001 43.293 164 87 2 18 178 15 175 1.61e-42 151
Msa0822470 MtrunA17_Chr2g0309891 45.963 161 74 3 20 178 8 157 1.75e-42 149
Msa0822470 MtrunA17_Chr6g0461661 46.707 167 80 4 11 176 10 168 2.42e-42 150
Msa0822470 MtrunA17_Chr1g0147421 40.909 176 91 3 11 185 20 183 2.77e-42 149
Msa0822470 MtrunA17_Chr5g0433781 42.553 188 90 5 20 201 8 183 3.13e-42 154
Msa0822470 MtrunA17_Chr6g0484441 40.212 189 97 4 15 203 2 174 8.99e-42 147
Msa0822470 MtrunA17_Chr2g0309331 40.984 183 84 4 17 192 9 174 1.07e-41 147
Msa0822470 MtrunA17_Chr1g0200561 40.426 188 93 6 15 197 16 189 2.40e-41 146
Msa0822470 MtrunA17_Chr3g0131911 48.125 160 77 3 20 178 16 170 6.67e-41 142
Msa0822470 MtrunA17_Chr8g0385991 46.067 178 79 6 20 190 16 183 1.07e-40 141
Msa0822470 MtrunA17_Chr4g0054791 36.052 233 118 5 14 236 2 213 2.04e-40 143
Msa0822470 MtrunA17_Chr5g0400461 42.857 168 72 4 20 178 8 160 2.78e-40 143
Msa0822470 MtrunA17_Chr3g0144271 48.905 137 68 2 11 146 16 151 1.17e-39 144
Msa0822470 MtrunA17_Chr1g0183741 42.073 164 71 3 20 178 12 156 2.41e-39 139
Msa0822470 MtrunA17_Chr2g0312321 45.679 162 65 4 20 176 13 156 2.93e-39 140
Msa0822470 MtrunA17_Chr1g0197351 44.262 183 90 4 18 194 42 218 2.97e-39 144
Msa0822470 MtrunA17_Chr7g0217721 41.808 177 92 4 10 178 9 182 3.07e-39 141
Msa0822470 MtrunA17_Chr5g0428991 46.875 160 71 3 21 178 28 175 2.81e-38 143
Msa0822470 MtrunA17_Chr1g0201021 50.769 130 59 2 19 146 20 146 7.14e-38 141
Msa0822470 MtrunA17_Chr3g0130101 40.719 167 85 3 14 178 3 157 1.41e-37 137
Msa0822470 MtrunA17_Chr3g0128151 34.276 283 139 10 21 279 25 284 1.69e-37 140
Msa0822470 MtrunA17_Chr7g0217711 44.156 154 81 2 10 161 9 159 3.90e-37 130
Msa0822470 MtrunA17_Chr8g0364791 41.718 163 81 4 18 178 6 156 4.79e-37 137
Msa0822470 MtrunA17_Chr7g0261411 41.975 162 70 3 20 176 12 154 7.57e-37 133
Msa0822470 MtrunA17_Chr1g0197361 42.857 168 80 5 20 184 10 164 1.73e-36 137
Msa0822470 MtrunA17_Chr8g0384201 40.491 163 83 4 18 178 6 156 2.44e-36 136
Msa0822470 MtrunA17_Chr3g0128111 40.625 160 81 3 21 178 45 192 3.92e-35 127
Msa0822470 MtrunA17_Chr3g0092671 42.353 170 78 5 20 184 7 161 5.63e-35 132
Msa0822470 MtrunA17_Chr8g0345671 46.457 127 63 4 21 144 14 138 1.76e-29 115
Msa0822470 MtrunA17_Chr2g0321631 29.825 285 147 10 20 292 6 249 1.80e-28 110
Msa0822470 MtrunA17_Chr4g0026141 38.547 179 91 7 15 185 2 169 1.63e-27 107
Msa0822470 MtrunA17_Chr8g0345691 46.457 127 63 4 21 144 15 139 7.81e-27 108
Msa0822470 MtrunA17_Chr8g0345711 43.307 127 67 4 21 144 15 139 2.46e-26 102
Msa0822470 MtrunA17_Chr4g0050701 32.075 159 96 3 20 178 13 159 9.81e-25 98.6
Msa0822470 MtrunA17_Chr7g0266701 34.118 170 90 6 20 178 6 164 2.00e-24 99.4
Msa0822470 MtrunA17_Chr3g0113001 42.623 122 61 3 63 184 10 122 2.42e-24 100
Msa0822470 MtrunA17_Chr8g0345731 39.394 132 73 5 19 144 24 154 6.54e-22 90.5
Msa0822470 MtrunA17_Chr2g0321741 43.434 99 52 2 47 144 21 116 2.12e-21 92.8
Msa0822470 MtrunA17_Chr8g0345721 36.538 156 65 5 21 144 38 191 5.45e-21 89.0
Msa0822470 MtrunA17_Chr7g0243371 47.253 91 44 2 71 161 17 103 2.58e-20 84.7
Msa0822470 MtrunA17_Chr7g0251651 38.060 134 75 5 14 144 13 141 7.69e-20 85.5
Msa0822470 MtrunA17_Chr8g0345741 38.333 120 69 4 29 145 2 119 2.46e-19 83.2
Msa0822470 MtrunA17_Chr8g0384351 32.704 159 75 6 20 178 12 138 3.32e-19 83.6
Msa0822470 MtrunA17_Chr8g0345701 37.838 148 71 7 21 151 10 153 1.18e-17 79.0
Msa0822470 MtrunA17_Chr7g0251661 31.788 151 92 6 16 160 7 152 3.80e-17 77.4
Msa0822470 MtrunA17_Chr7g0251671 33.333 126 77 4 21 144 13 133 5.89e-17 77.0
Msa0822470 MtrunA17_Chr3g0113031 42.000 100 50 3 79 178 1 92 1.28e-16 78.2
Msa0822470 MtrunA17_Chr3g0130321 26.875 160 107 4 20 177 9 160 1.15e-14 71.6
Msa0822470 MtrunA17_Chr1g0194791 61.702 47 17 1 20 65 48 94 9.95e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0822470 AT2G43000.1 51.877 293 111 7 10 299 10 275 4.88e-93 277
Msa0822470 AT3G12910.1 47.756 312 118 12 10 300 13 300 2.69e-80 246
Msa0822470 AT5G39820.1 60.335 179 58 2 12 178 14 191 2.01e-74 232
Msa0822470 AT1G26870.1 62.791 172 63 1 7 178 5 175 4.04e-72 229
Msa0822470 AT2G02450.1 53.704 162 62 3 17 178 50 198 2.28e-55 184
Msa0822470 AT2G02450.2 53.704 162 62 3 17 178 50 198 2.94e-55 185
Msa0822470 AT5G63790.1 45.960 198 96 5 12 208 43 230 4.57e-53 176
Msa0822470 AT5G63790.2 45.960 198 96 5 12 208 53 240 5.59e-53 176
Msa0822470 AT5G08790.1 48.677 189 88 4 16 203 4 184 1.30e-52 174
Msa0822470 AT3G04070.2 52.174 161 73 2 20 178 12 170 3.05e-52 175
Msa0822470 AT3G04070.1 49.714 175 72 4 20 178 12 186 4.59e-51 172
Msa0822470 AT1G69490.1 44.041 193 94 3 20 206 11 195 6.37e-51 169
Msa0822470 AT1G61110.1 51.852 162 73 4 20 178 18 177 1.75e-50 170
Msa0822470 AT2G43000.2 45.536 224 92 7 79 299 1 197 5.07e-50 165
Msa0822470 AT3G15510.1 49.689 161 74 4 22 178 21 178 1.78e-49 168
Msa0822470 AT2G24430.2 34.483 290 169 5 7 294 5 275 2.47e-49 167
Msa0822470 AT2G24430.1 34.483 290 169 5 7 294 5 275 2.47e-49 167
Msa0822470 AT1G01720.1 51.572 159 68 3 20 178 9 158 6.92e-49 165
Msa0822470 AT4G27410.2 50.314 159 67 2 20 178 16 162 5.67e-48 162
Msa0822470 AT1G52890.1 49.697 165 71 2 20 184 16 168 7.67e-48 163
Msa0822470 AT1G77450.1 44.271 192 90 4 20 211 12 186 1.26e-47 160
Msa0822470 AT3G15500.1 49.112 169 74 2 20 188 16 172 1.52e-47 162
Msa0822470 AT5G61430.1 45.763 177 86 2 8 184 6 172 2.16e-47 162
Msa0822470 AT1G12260.2 47.561 164 69 3 18 178 7 156 5.26e-47 161
Msa0822470 AT1G12260.1 47.561 164 69 3 18 178 7 156 7.94e-47 162
Msa0822470 AT2G17040.1 54.545 132 60 0 16 147 4 135 1.25e-46 159
Msa0822470 AT5G07680.1 46.286 175 82 3 10 184 11 173 3.24e-46 159
Msa0822470 AT5G07680.2 47.273 165 77 2 20 184 5 159 9.15e-46 157
Msa0822470 AT1G62700.1 46.328 177 73 5 18 191 7 164 4.08e-45 158
Msa0822470 AT1G62700.2 46.328 177 73 5 18 191 7 164 4.08e-45 158
Msa0822470 AT4G36160.1 45.181 166 74 3 18 180 10 161 7.97e-45 157
Msa0822470 AT4G36160.3 45.181 166 74 3 18 180 10 161 7.97e-45 157
Msa0822470 AT4G36160.2 45.181 166 74 3 18 180 14 165 8.24e-45 157
Msa0822470 AT5G39610.1 47.170 159 74 2 20 178 22 170 1.11e-44 154
Msa0822470 AT5G66300.1 43.017 179 81 5 18 188 12 177 1.83e-44 153
Msa0822470 AT5G18270.1 49.686 159 71 3 20 178 23 172 2.42e-44 154
Msa0822470 AT3G18400.1 45.294 170 80 3 15 184 2 158 2.70e-44 154
Msa0822470 AT1G52880.1 48.734 158 79 2 22 178 21 177 3.10e-44 154
Msa0822470 AT4G10350.1 38.222 225 115 6 18 237 9 214 4.03e-44 154
Msa0822470 AT5G13180.1 50.955 157 63 3 20 176 16 158 4.99e-44 151
Msa0822470 AT5G62380.2 45.122 164 73 4 18 178 7 156 5.10e-44 154
Msa0822470 AT5G62380.1 45.122 164 73 4 18 178 7 156 5.10e-44 154
Msa0822470 AT4G27410.3 46.023 176 66 3 20 178 16 179 5.16e-44 153
Msa0822470 AT5G18270.2 49.057 159 72 3 20 178 23 172 8.53e-44 153
Msa0822470 AT2G18060.3 43.902 164 75 3 18 178 9 158 1.53e-43 153
Msa0822470 AT2G18060.1 43.902 164 75 3 18 178 9 158 1.53e-43 153
Msa0822470 AT1G71930.2 37.736 265 132 12 20 275 11 251 2.75e-43 151
Msa0822470 AT1G71930.1 37.736 265 132 12 20 275 11 251 2.75e-43 151
Msa0822470 AT3G04060.1 49.693 163 72 4 20 181 22 175 4.15e-43 151
Msa0822470 AT3G29035.1 53.846 130 57 1 20 149 26 152 9.85e-43 149
Msa0822470 AT5G53950.1 44.444 171 87 3 8 178 7 169 1.38e-42 150
Msa0822470 AT1G33280.1 45.122 164 72 4 18 178 8 156 2.41e-42 148
Msa0822470 AT1G65910.1 49.068 161 68 4 20 178 8 156 2.86e-42 154
Msa0822470 AT3G10480.1 42.541 181 87 4 18 192 27 196 2.94e-42 151
Msa0822470 AT3G12977.1 45.283 159 76 3 20 178 20 167 3.11e-42 147
Msa0822470 AT3G10480.2 42.541 181 86 4 18 192 27 195 3.52e-42 151
Msa0822470 AT4G17980.1 52.713 129 58 2 20 146 8 135 3.91e-42 146
Msa0822470 AT4G17980.2 52.713 129 58 2 20 146 8 135 4.18e-42 147
Msa0822470 AT3G17730.1 45.963 161 73 5 20 178 8 156 5.38e-42 145
Msa0822470 AT3G15170.1 44.068 177 89 5 1 175 1 169 5.89e-42 147
Msa0822470 AT1G76420.1 41.667 168 87 2 11 178 15 171 6.84e-42 148
Msa0822470 AT3G03200.1 48.765 162 70 5 20 179 8 158 9.57e-42 150
Msa0822470 AT5G17260.1 47.531 162 72 5 20 179 8 158 2.41e-41 149
Msa0822470 AT1G32770.1 37.611 226 106 8 18 232 16 217 4.66e-41 146
Msa0822470 AT1G79580.3 42.690 171 81 4 18 185 17 173 5.57e-41 146
Msa0822470 AT1G79580.5 42.690 171 81 4 18 185 17 173 5.57e-41 146
Msa0822470 AT1G79580.4 42.690 171 81 4 18 185 17 173 5.57e-41 146
Msa0822470 AT1G79580.2 42.690 171 81 4 18 185 17 173 5.57e-41 146
Msa0822470 AT1G79580.1 42.690 171 81 4 18 185 17 173 5.57e-41 146
Msa0822470 AT3G10490.1 41.989 181 88 5 18 192 27 196 9.34e-41 142
Msa0822470 AT2G33480.2 48.408 157 64 3 20 176 17 156 1.93e-40 142
Msa0822470 AT1G54330.1 45.963 161 70 3 20 178 8 153 3.60e-40 142
Msa0822470 AT2G33480.1 48.408 157 66 4 20 176 17 158 6.47e-40 141
Msa0822470 AT1G32510.1 44.848 165 77 4 20 178 8 164 7.94e-40 141
Msa0822470 AT5G46590.2 50.388 129 60 2 20 146 8 134 1.26e-39 140
Msa0822470 AT2G46770.1 41.420 169 87 4 18 178 16 180 1.73e-39 142
Msa0822470 AT5G46590.1 50.388 129 60 2 20 146 8 134 2.23e-39 140
Msa0822470 AT3G10490.2 42.541 181 87 6 18 192 27 196 2.91e-39 143
Msa0822470 AT5G04410.1 44.785 163 76 4 18 178 9 159 6.11e-39 144
Msa0822470 AT3G10500.1 43.195 169 82 4 18 184 9 165 9.27e-39 144
Msa0822470 AT1G56010.2 45.625 160 77 5 20 178 21 171 1.41e-38 139
Msa0822470 AT5G09330.5 42.331 163 80 4 18 178 6 156 2.07e-38 142
Msa0822470 AT5G09330.2 42.331 163 80 4 18 178 6 156 2.07e-38 142
Msa0822470 AT5G09330.4 42.331 163 80 4 18 178 6 156 2.07e-38 142
Msa0822470 AT5G09330.3 42.331 163 80 4 18 178 6 156 2.07e-38 142
Msa0822470 AT5G09330.1 42.331 163 80 4 18 178 6 156 2.07e-38 142
Msa0822470 AT1G33060.2 35.685 241 136 6 16 252 22 247 4.80e-38 142
Msa0822470 AT1G34190.1 49.612 129 60 2 20 146 18 143 4.81e-38 142
Msa0822470 AT1G33060.1 35.685 241 136 6 16 252 22 247 5.22e-38 142
Msa0822470 AT3G61910.1 40.000 170 88 4 18 178 11 175 1.32e-37 136
Msa0822470 AT1G34180.3 49.612 129 60 2 20 146 18 143 2.10e-37 138
Msa0822470 AT3G10480.3 36.449 214 86 5 18 192 27 229 6.20e-37 138
Msa0822470 AT4G35580.1 45.000 160 74 3 21 178 12 159 6.68e-37 138
Msa0822470 AT4G35580.3 45.399 163 74 4 19 178 9 159 7.10e-37 138
Msa0822470 AT4G35580.2 45.399 163 74 4 19 178 9 159 8.09e-37 138
Msa0822470 AT1G34180.1 47.794 136 66 2 13 146 11 143 8.53e-37 138
Msa0822470 AT2G27300.1 44.186 129 68 2 17 144 13 138 4.64e-35 130
Msa0822470 AT5G22290.1 32.377 244 140 6 14 251 17 241 5.24e-35 130
Msa0822470 AT5G24590.2 37.657 239 106 8 13 236 2 212 1.26e-34 131
Msa0822470 AT1G34180.4 44.681 141 61 2 20 146 18 155 1.35e-34 131
Msa0822470 AT3G44290.2 45.669 127 65 2 19 144 15 138 3.15e-34 125
Msa0822470 AT4G28530.1 40.000 175 75 4 20 178 12 172 4.24e-34 127
Msa0822470 AT1G34180.2 43.243 148 67 2 13 146 11 155 4.89e-34 131
Msa0822470 AT5G64060.1 41.718 163 81 4 18 178 6 156 5.74e-34 127
Msa0822470 AT3G49530.2 41.104 163 82 4 19 178 13 164 7.52e-34 128
Msa0822470 AT3G44290.1 45.669 127 65 2 19 144 15 138 1.18e-33 126
Msa0822470 AT3G49530.1 41.104 163 82 4 19 178 13 164 2.67e-33 127
Msa0822470 AT5G04395.1 40.000 140 71 1 20 146 30 169 4.29e-29 110
Msa0822470 AT1G32870.2 46.429 140 68 3 9 146 1 135 7.70e-29 115
Msa0822470 AT1G32870.1 46.429 140 68 3 9 146 1 135 9.93e-29 115
Msa0822470 AT1G32870.3 46.429 140 68 3 9 146 37 171 1.26e-28 115
Msa0822470 AT5G61430.2 46.552 116 52 2 69 184 4 109 8.25e-28 109
Msa0822470 AT5G64530.2 39.844 128 64 3 20 147 5 119 4.17e-27 104
Msa0822470 AT5G64530.1 39.844 128 64 3 20 147 5 119 5.82e-27 104
Msa0822470 AT3G12977.2 44.828 116 53 3 63 178 10 114 6.75e-26 103
Msa0822470 AT5G22380.1 29.268 246 142 8 15 254 3 222 4.02e-25 101
Msa0822470 AT4G01550.1 41.985 131 73 2 19 146 5 135 3.12e-24 102
Msa0822470 AT4G01520.1 29.197 274 160 11 21 284 7 256 9.00e-24 99.0
Msa0822470 AT4G10350.2 34.857 175 93 5 65 237 12 167 4.37e-23 97.1
Msa0822470 AT3G44350.2 31.553 206 117 7 21 214 8 201 4.92e-23 95.9
Msa0822470 AT1G56010.1 44.643 112 53 4 67 178 2 104 1.26e-22 95.1
Msa0822470 AT4G01540.4 40.152 132 75 3 19 146 5 136 5.65e-22 95.5
Msa0822470 AT4G01540.2 40.152 132 75 3 19 146 5 136 8.91e-22 95.1
Msa0822470 AT4G01540.3 40.152 132 75 3 19 146 5 136 9.13e-22 95.1
Msa0822470 AT3G44350.1 36.486 148 82 5 21 160 8 151 9.70e-22 90.1
Msa0822470 AT4G01540.1 40.152 132 75 3 19 146 5 136 1.12e-21 95.1
Msa0822470 AT1G02230.1 39.844 128 70 4 21 144 6 130 2.10e-20 90.5
Msa0822470 AT1G02250.1 41.406 128 68 4 21 144 6 130 6.23e-20 89.4
Msa0822470 AT4G28530.2 43.810 105 43 2 20 108 12 116 7.23e-20 88.6
Msa0822470 AT2G33480.3 43.396 106 48 3 71 176 8 101 1.86e-19 85.5
Msa0822470 AT1G01010.1 37.584 149 80 5 14 152 2 147 4.94e-18 84.3
Msa0822470 AT3G04420.2 38.760 129 70 4 21 144 6 130 2.50e-17 80.9
Msa0822470 AT3G04420.1 38.760 129 70 4 21 144 6 130 8.07e-17 80.1
Msa0822470 AT1G02220.1 33.125 160 83 6 21 176 6 145 3.39e-14 72.8
Msa0822470 AT5G14000.2 32.812 128 79 3 21 146 18 140 4.54e-14 69.3
Msa0822470 AT5G50820.1 36.552 145 73 7 20 157 19 151 5.12e-14 69.7
Msa0822470 AT2G18060.2 40.964 83 35 2 96 178 2 70 6.00e-14 71.2
Msa0822470 AT5G14000.1 33.588 131 79 4 19 146 15 140 1.84e-13 68.6
Msa0822470 AT3G10490.4 38.614 101 47 5 91 187 2 91 1.87e-12 67.4
Msa0822470 AT3G10490.3 38.614 101 47 5 91 187 2 91 1.87e-12 67.4

Find 59 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCATTTGCAAATGATAAT+TGG 0.204767 5_3:+60907274 Msa0822470:CDS
GAGTGACAGGATCTGGATTT+TGG 0.226878 5_3:+60901880 Msa0822470:CDS
GAAATGAGTGGTTAAATCTT+TGG 0.258441 5_3:-60907167 None:intergenic
TTACAATCATAAACCTTTGA+TGG 0.272440 5_3:-60907333 None:intergenic
GAAGATGAAGTTGTGCTTCC+TGG 0.272458 5_3:+60900995 Msa0822470:CDS
GAAACCAAACCATTCATTAA+TGG 0.288779 5_3:+60907135 Msa0822470:CDS
AGATTCTATGCTGCATGTTT+TGG 0.299357 5_3:-60907049 None:intergenic
CACTGGTACCCATTCAATAA+AGG 0.300520 5_3:-60907464 None:intergenic
CACTCATTTCTAAATCAATT+AGG 0.323141 5_3:+60907180 Msa0822470:CDS
ATGCATCATCCAATCAGTTT+TGG 0.326620 5_3:-60902009 None:intergenic
CCAGATCCTGTCACTCTATT+AGG 0.347513 5_3:-60901873 None:intergenic
CATTGGACTCAAGAAATCAT+TGG 0.361070 5_3:+60901956 Msa0822470:CDS
GATTCTTTAACACAATATAT+AGG 0.374225 5_3:-60901924 None:intergenic
CCTAATAGAGTGACAGGATC+TGG 0.379091 5_3:+60901873 Msa0822470:CDS
CCACCTACTCCTTTATTGAA+TGG 0.389225 5_3:+60907455 Msa0822470:three_prime_UTR
CCAACAGATGAAGAGCTTGT+TGG 0.392234 5_3:+60901031 Msa0822470:CDS
CACCTACTCCTTTATTGAAT+GGG 0.402674 5_3:+60907456 Msa0822470:three_prime_UTR
ATGTCCATTAATGAATGGTT+TGG 0.424757 5_3:-60907139 None:intergenic
GTTTATTACCGTGGAAGTGC+AGG 0.429710 5_3:+60901978 Msa0822470:CDS
TGCATTTGCAAATGATAATT+GGG 0.437550 5_3:+60907275 Msa0822470:CDS
TCAAGAGTTTGTGGTACTCT+AGG 0.440130 5_3:+60900921 None:intergenic
GTTTAAGAGGAAGAAAATAC+AGG 0.449796 5_3:+60901838 Msa0822470:CDS
TCATCATGTCCATTAATGAA+TGG 0.458277 5_3:-60907144 None:intergenic
GAAAATACAGGAACAGCATA+AGG 0.468401 5_3:+60901850 Msa0822470:CDS
CAACAAGCTCTTCATCTGTT+GGG 0.469343 5_3:-60901030 None:intergenic
AAGATGAAGTTGTGCTTCCT+GGG 0.478780 5_3:+60900996 Msa0822470:CDS
CCAACAAGCTCTTCATCTGT+TGG 0.483221 5_3:-60901031 None:intergenic
GGAAAGGCACCAAAACTGAT+TGG 0.496667 5_3:+60902000 Msa0822470:CDS
GAATTTCGTCTCCCACCTAA+AGG 0.503701 5_3:+60902032 Msa0822470:CDS
ACATATACAAATATGATCCA+TGG 0.505053 5_3:+60901116 Msa0822470:CDS
ATAAGGCCTAATAGAGTGAC+AGG 0.505529 5_3:+60901867 Msa0822470:CDS
ATCTTACTTGGTAGATCCCA+TGG 0.505712 5_3:-60901133 None:intergenic
TGCCTTTCCCTGCACTTCCA+CGG 0.521527 5_3:-60901986 None:intergenic
TATGAAGAAGCTAGTACTGT+GGG 0.526184 5_3:+60901792 Msa0822470:intron
TTGGAATGATCAAAATGTTG+TGG 0.532956 5_3:+60907248 Msa0822470:CDS
GAGTGAGACAAGGTGGTTGT+TGG 0.535066 5_3:-60907219 None:intergenic
AATAAAGGAGTAGGTGGGAC+CGG 0.536483 5_3:-60907449 None:intergenic
AAAGAATCACATGAATGCAT+TGG 0.548150 5_3:+60901939 Msa0822470:CDS
CCATTCAATAAAGGAGTAGG+TGG 0.553141 5_3:-60907455 None:intergenic
GAAGAGTTAATAGCGAATGC+TGG 0.553313 5_3:-60907021 None:intergenic
ATAAACCTTTGATGGATCAA+AGG 0.554674 5_3:-60907325 None:intergenic
CATATACAAATATGATCCAT+GGG 0.566140 5_3:+60901117 Msa0822470:CDS
GTTTACCTTTGATCCATCAA+AGG 0.568973 5_3:+60907320 Msa0822470:CDS
TACCGTGGAAGTGCAGGGAA+AGG 0.579675 5_3:+60901984 Msa0822470:CDS
CTAATTGATTTAGAAATGAG+TGG 0.579913 5_3:-60907179 None:intergenic
AAATCATTGGTTTATTACCG+TGG 0.595243 5_3:+60901969 Msa0822470:CDS
CAAGCTCTTCATCTGTTGGG+TGG 0.597957 5_3:-60901027 None:intergenic
TTGATGAGTTCAATTCGAAG+AGG 0.598835 5_3:-60901085 None:intergenic
TTTATTACCGTGGAAGTGCA+GGG 0.598928 5_3:+60901979 Msa0822470:CDS
TCATTGCTATGATTAAGAAG+TGG 0.602276 5_3:-60902071 None:intergenic
ATATGAAGAAGCTAGTACTG+TGG 0.602894 5_3:+60901791 Msa0822470:intron
TTTGTGAAAGTCAAGTATTG+TGG 0.625769 5_3:-60907084 None:intergenic
AATTTGCATTGCAGGAAGTG+TGG 0.627428 5_3:+60906926 Msa0822470:intron
TACCCATTCAATAAAGGAGT+AGG 0.644704 5_3:-60907458 None:intergenic
TGAAGAAGCTAGTACTGTGG+GGG 0.650951 5_3:+60901794 Msa0822470:intron
GTTGGGTGGAATCTAAACCC+AGG 0.685010 5_3:-60901013 None:intergenic
CATTCAATAAAGGAGTAGGT+GGG 0.689434 5_3:-60907454 None:intergenic
ATGAAGAAGCTAGTACTGTG+GGG 0.690541 5_3:+60901793 Msa0822470:intron
AAAACTTGAGTGAGACAAGG+TGG 0.702006 5_3:-60907226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCTTTTTCATTTTTATAA+AGG - chr5_3:60903496-60903515 None:intergenic 10.0%
!!! AGTTTTTTTTTGTTTTTTTA+AGG + chr5_3:60903551-60903570 Msa0822470:intron 10.0%
!!! CCTTATTTATTAATTTTATT+AGG - chr5_3:60904169-60904188 None:intergenic 10.0%
!! CCTAATAAAATTAATAAATA+AGG + chr5_3:60904166-60904185 Msa0822470:intron 10.0%
!! TTAATAAATAAGGATAAATA+AGG + chr5_3:60904176-60904195 Msa0822470:intron 10.0%
!!! ATTTTATCATATATTTTTGT+AGG - chr5_3:60904861-60904880 None:intergenic 10.0%
!! AATATATGATAAAATTAAAG+TGG + chr5_3:60904866-60904885 Msa0822470:intron 10.0%
!!! CTTTTTTTTTTTTTTTTTAG+GGG + chr5_3:60905252-60905271 Msa0822470:intron 10.0%
!!! AAAGAATTATATATTTTATG+AGG - chr5_3:60905531-60905550 None:intergenic 10.0%
!! TTATAAATTAAATAATGACT+TGG + chr5_3:60906748-60906767 Msa0822470:intron 10.0%
!! CCATATATTATAATCAAAAT+GGG - chr5_3:60901713-60901732 None:intergenic 15.0%
!! ACCATATATTATAATCAAAA+TGG - chr5_3:60901714-60901733 None:intergenic 15.0%
!!! TGTTTTTGCATTTATAATTA+AGG + chr5_3:60902149-60902168 Msa0822470:intron 15.0%
!!! GTTTTTGCATTTATAATTAA+GGG + chr5_3:60902150-60902169 Msa0822470:intron 15.0%
!!! TTTTTGCATTTATAATTAAG+GGG + chr5_3:60902151-60902170 Msa0822470:intron 15.0%
!! AATTTACCAAATTTATTCAT+AGG + chr5_3:60902287-60902306 Msa0822470:intron 15.0%
!! GTATTTAGAAAAAATATGTT+TGG + chr5_3:60902358-60902377 Msa0822470:intron 15.0%
!!! TCATGAGAATAAAATATTTT+CGG - chr5_3:60902529-60902548 None:intergenic 15.0%
!!! TTAATTTTGCTTTTCTTAAT+AGG + chr5_3:60902892-60902911 Msa0822470:intron 15.0%
!!! TAATTTTGCTTTTCTTAATA+GGG + chr5_3:60902893-60902912 Msa0822470:intron 15.0%
!! TATTTCAATAAAAATGTTAG+TGG + chr5_3:60903271-60903290 Msa0822470:intron 15.0%
!!! TTTTTTAAAATTGTTTTGCA+AGG - chr5_3:60903345-60903364 None:intergenic 15.0%
!!! TTTTTGTTTCTTTTGTTTTT+AGG + chr5_3:60903585-60903604 Msa0822470:intron 15.0%
!!! TTTTGTTTCTTTTGTTTTTA+GGG + chr5_3:60903586-60903605 Msa0822470:intron 15.0%
!!! ATGTGATATTTTTATTTTCA+CGG + chr5_3:60903613-60903632 Msa0822470:intron 15.0%
!! AAATAAATCAAATTATTACG+TGG - chr5_3:60903645-60903664 None:intergenic 15.0%
!! TAATAAAAAAAACGAAAAGA+CGG - chr5_3:60903730-60903749 None:intergenic 15.0%
!! ACTATATTTATAAACAATAG+AGG - chr5_3:60903897-60903916 None:intergenic 15.0%
!! ATTTGATTAAAAAAAAAAGG+AGG + chr5_3:60904286-60904305 Msa0822470:intron 15.0%
!!! ATTTGTTAGGTTAAAAAATA+AGG + chr5_3:60904320-60904339 Msa0822470:intron 15.0%
!!! TTTTGTCAAAAAAAATCATT+TGG - chr5_3:60904716-60904735 None:intergenic 15.0%
!! TTAGTTAATTAAAAGTCATT+TGG - chr5_3:60905199-60905218 None:intergenic 15.0%
!! TAATCTTGCAAAATATATAT+TGG + chr5_3:60905216-60905235 Msa0822470:intron 15.0%
!! TTAAAAAAGACATAATTGAA+TGG - chr5_3:60906076-60906095 None:intergenic 15.0%
!!! TAAGCGAAAATATATTTTTT+AGG - chr5_3:60906604-60906623 None:intergenic 15.0%
!! TCAATAACATATATTATGAG+AGG - chr5_3:60901167-60901186 None:intergenic 20.0%
!! GCAAAAAAATTTGTGTAAAA+AGG + chr5_3:60901430-60901449 Msa0822470:intron 20.0%
!!! CCCATTTTGATTATAATATA+TGG + chr5_3:60901710-60901729 Msa0822470:intron 20.0%
!!! TGTTATTTCTTTTGTTTAAG+AGG + chr5_3:60901825-60901844 Msa0822470:CDS 20.0%
!! GATTCTTTAACACAATATAT+AGG - chr5_3:60901927-60901946 None:intergenic 20.0%
!! TACTTTCCTATGAATAAATT+TGG - chr5_3:60902296-60902315 None:intergenic 20.0%
!! GTTAACTTTATAATATTCCT+AGG + chr5_3:60902380-60902399 Msa0822470:intron 20.0%
!! AATTATAATCCCTATCTTTA+TGG - chr5_3:60902408-60902427 None:intergenic 20.0%
!! AAGATAGGGATTATAATTAT+AGG + chr5_3:60902410-60902429 Msa0822470:intron 20.0%
!! AAAAAATTTCCCAAAGAAAA+GGG - chr5_3:60902483-60902502 None:intergenic 20.0%
!!! CATGAGAATAAAATATTTTC+GGG - chr5_3:60902528-60902547 None:intergenic 20.0%
!! ATGTTTATGCAAGAAATTAT+TGG + chr5_3:60902634-60902653 Msa0822470:intron 20.0%
!! CAAATTCTTATTCTCTTAAA+TGG + chr5_3:60902664-60902683 Msa0822470:intron 20.0%
!! AAGAAAAGCAAAATTAAAGA+GGG - chr5_3:60902889-60902908 None:intergenic 20.0%
!! TAAGAAAAGCAAAATTAAAG+AGG - chr5_3:60902890-60902909 None:intergenic 20.0%
!! AAATGGATATGTAATCTTAA+AGG - chr5_3:60903239-60903258 None:intergenic 20.0%
!!! AAATATAGTTGCTTCTAAAA+TGG - chr5_3:60903256-60903275 None:intergenic 20.0%
!!! TGTGATATTTTTATTTTCAC+GGG + chr5_3:60903614-60903633 Msa0822470:intron 20.0%
!! GTAACAAACAAAATTGTTTA+AGG + chr5_3:60903839-60903858 Msa0822470:intron 20.0%
!!! TATAAACAATAGAGGATTTT+AGG - chr5_3:60903889-60903908 None:intergenic 20.0%
!! AGGATAAATAAGGATAAAAA+AGG + chr5_3:60904186-60904205 Msa0822470:intron 20.0%
!!! CAAATATTTTCTACACTTTT+AGG - chr5_3:60904271-60904290 None:intergenic 20.0%
!! ATTAAAAAAAAAAGGAGGAT+AGG + chr5_3:60904291-60904310 Msa0822470:intron 20.0%
!! TAGGTTAAAAAATAAGGATT+CGG + chr5_3:60904326-60904345 Msa0822470:intron 20.0%
!!! TATCAAGTTAGCTATAATTT+TGG - chr5_3:60904356-60904375 None:intergenic 20.0%
!! TAATTAAGTAAGATGATCAA+TGG + chr5_3:60904394-60904413 Msa0822470:intron 20.0%
!!! TGGTTTTGAATTGTTTTTTT+AGG - chr5_3:60904625-60904644 None:intergenic 20.0%
!! ATATATTCTTCGTCAATTAA+TGG - chr5_3:60904645-60904664 None:intergenic 20.0%
!! TTACCTAAAAAAAAGTCATT+TGG - chr5_3:60904691-60904710 None:intergenic 20.0%
!! AAGATTAAAGATTAATCTGA+TGG - chr5_3:60905649-60905668 None:intergenic 20.0%
!! TTACTTATAATAGTGATGTT+TGG - chr5_3:60906502-60906521 None:intergenic 20.0%
!! TTTATAAATTATACACCTTG+CGG - chr5_3:60906636-60906655 None:intergenic 20.0%
!!! TTTGTTTTAAACATACTGTA+TGG + chr5_3:60906903-60906922 Msa0822470:intron 20.0%
!!! TAGTACATATAACAATTTTC+CGG + chr5_3:60907430-60907449 Msa0822470:three_prime_UTR 20.0%
! ACATATACAAATATGATCCA+TGG + chr5_3:60901116-60901135 Msa0822470:CDS 25.0%
! CATATACAAATATGATCCAT+GGG + chr5_3:60901117-60901136 Msa0822470:CDS 25.0%
! GAGGAAAATAAAATCTTACT+TGG - chr5_3:60901148-60901167 None:intergenic 25.0%
!! AGACTCATCATAATTTTACT+CGG + chr5_3:60901381-60901400 Msa0822470:intron 25.0%
!!! TTTGTGTAAAAAGGTGTTAT+CGG + chr5_3:60901439-60901458 Msa0822470:intron 25.0%
!!! TTATTGCTAGTTTTTCCTTT+AGG - chr5_3:60902050-60902069 None:intergenic 25.0%
! AAAGTAGAAATAACGTTTCT+TGG + chr5_3:60902310-60902329 Msa0822470:intron 25.0%
! GTTTCTTGGAATATAAAGAT+GGG + chr5_3:60902324-60902343 Msa0822470:intron 25.0%
! GAAAAAATTTCCCAAAGAAA+AGG - chr5_3:60902484-60902503 None:intergenic 25.0%
! TTTATCGCAAAATTTAATGC+GGG - chr5_3:60902827-60902846 None:intergenic 25.0%
! CTTTATCGCAAAATTTAATG+CGG - chr5_3:60902828-60902847 None:intergenic 25.0%
! TTAAAGAGGGAAATTAAAGA+CGG - chr5_3:60902876-60902895 None:intergenic 25.0%
! ACAATAAAAATGAGTGTTAG+TGG + chr5_3:60903200-60903219 Msa0822470:intron 25.0%
! TAGGGTTAATTAAGATTGAT+TGG + chr5_3:60903399-60903418 Msa0822470:intron 25.0%
!!! CATTTTAGAAGGAATTTGTT+AGG + chr5_3:60904080-60904099 Msa0822470:intron 25.0%
!!! AATTTTGGAGGGAAATTATT+AGG + chr5_3:60904128-60904147 Msa0822470:intron 25.0%
!! GCTAACTTGATAACAAAATT+CGG + chr5_3:60904364-60904383 Msa0822470:intron 25.0%
! AACACACTTATGAAAATATC+TGG + chr5_3:60904568-60904587 Msa0822470:intron 25.0%
!!! AGTCCAAATGACTTTTTTTT+AGG + chr5_3:60904685-60904704 Msa0822470:intron 25.0%
! TCCAAGTTAATAGCATATAA+CGG + chr5_3:60904828-60904847 Msa0822470:intron 25.0%
! TATGATAAAATTAAAGTGGC+CGG + chr5_3:60904870-60904889 Msa0822470:intron 25.0%
!! AGTGATTTTCACATAGATTT+AGG - chr5_3:60905068-60905087 None:intergenic 25.0%
! TCTTTACATAGATTCTAGAT+GGG - chr5_3:60905357-60905376 None:intergenic 25.0%
! AATATACATCATCTTTGATG+TGG + chr5_3:60905561-60905580 Msa0822470:intron 25.0%
!!! ATGTCTCAAATTTGATTTTC+TGG - chr5_3:60906014-60906033 None:intergenic 25.0%
! TGAAAATACAATATTGAACC+AGG - chr5_3:60906262-60906281 None:intergenic 25.0%
! AATCTAAGGGTTAAATTAAG+TGG + chr5_3:60906433-60906452 Msa0822470:intron 25.0%
! CAACGTGAATAAGTAAAAAT+TGG - chr5_3:60906676-60906695 None:intergenic 25.0%
!! CAATTTTTACTTATTCACGT+TGG + chr5_3:60906674-60906693 Msa0822470:intron 25.0%
! CATGTACATAGACAAAATTA+AGG + chr5_3:60906806-60906825 Msa0822470:intron 25.0%
!! AACAAAAACACACTTTTCAA+AGG - chr5_3:60906889-60906908 None:intergenic 25.0%
!!! GTGTGTATTTTTTGTATGAT+GGG - chr5_3:60906978-60906997 None:intergenic 25.0%
!! CTAATTGATTTAGAAATGAG+TGG - chr5_3:60907182-60907201 None:intergenic 25.0%
! CACTCATTTCTAAATCAATT+AGG + chr5_3:60907180-60907199 Msa0822470:CDS 25.0%
! ATGCATTTGCAAATGATAAT+TGG + chr5_3:60907274-60907293 Msa0822470:CDS 25.0%
! TGCATTTGCAAATGATAATT+GGG + chr5_3:60907275-60907294 Msa0822470:CDS 25.0%
! TTACAATCATAAACCTTTGA+TGG - chr5_3:60907336-60907355 None:intergenic 25.0%
!!! CTCTAGGATTTTGACAAATA+TGG + chr5_3:60900937-60900956 Msa0822470:exon 30.0%
!! GATTTTGACAAATATGGATG+TGG + chr5_3:60900943-60900962 Msa0822470:exon 30.0%
!!! AGCTTGTTGGATTTTATCTA+CGG + chr5_3:60901044-60901063 Msa0822470:CDS 30.0%
TGCATGCATGTTTACATTAT+AGG + chr5_3:60901659-60901678 Msa0822470:intron 30.0%
CATGTTTACATTATAGGCTA+TGG + chr5_3:60901665-60901684 Msa0822470:intron 30.0%
ATTATAGGCTATGGATCTAT+AGG + chr5_3:60901674-60901693 Msa0822470:intron 30.0%
GTTTAAGAGGAAGAAAATAC+AGG + chr5_3:60901838-60901857 Msa0822470:CDS 30.0%
AAAGAATCACATGAATGCAT+TGG + chr5_3:60901939-60901958 Msa0822470:CDS 30.0%
!! AAATCATTGGTTTATTACCG+TGG + chr5_3:60901969-60901988 Msa0822470:CDS 30.0%
TCATTGCTATGATTAAGAAG+TGG - chr5_3:60902074-60902093 None:intergenic 30.0%
CGTTTCTTGGAATATAAAGA+TGG + chr5_3:60902323-60902342 Msa0822470:intron 30.0%
AATAAAGTTCCTATGGAGAT+GGG - chr5_3:60902456-60902475 None:intergenic 30.0%
! TTTATTCTCACCCTTTTCTT+TGG + chr5_3:60902470-60902489 Msa0822470:intron 30.0%
! TTATTCTCACCCTTTTCTTT+GGG + chr5_3:60902471-60902490 Msa0822470:intron 30.0%
TGAAGAAGAAGATTTAGAGA+GGG + chr5_3:60902777-60902796 Msa0822470:intron 30.0%
! CGCATTAAATTTTGCGATAA+AGG + chr5_3:60902826-60902845 Msa0822470:intron 30.0%
TTGCGATAAAGGAATTTGTA+AGG + chr5_3:60902837-60902856 Msa0822470:intron 30.0%
TGCATCAACAAAAATGAACA+TGG + chr5_3:60903125-60903144 Msa0822470:intron 30.0%
GTGTTAGTGGCTTAAAAAAA+AGG + chr5_3:60903213-60903232 Msa0822470:intron 30.0%
TAAAAATGTTAGTGGTCTAG+TGG + chr5_3:60903279-60903298 Msa0822470:intron 30.0%
!!! TGTTTCTTTTGTTTTTAGGG+AGG + chr5_3:60903589-60903608 Msa0822470:intron 30.0%
ATTTACATTATGTCAACGTG+TGG + chr5_3:60903684-60903703 Msa0822470:intron 30.0%
GAATAAAAAACTTATCAGCG+AGG + chr5_3:60904037-60904056 Msa0822470:intron 30.0%
! GCTAATCTAATGCAGAATTT+TGG + chr5_3:60904113-60904132 Msa0822470:intron 30.0%
! AATCTAATGCAGAATTTTGG+AGG + chr5_3:60904116-60904135 Msa0822470:intron 30.0%
! ATCTAATGCAGAATTTTGGA+GGG + chr5_3:60904117-60904136 Msa0822470:intron 30.0%
! GGATAAAAAAGGCATGAAAT+TGG + chr5_3:60904197-60904216 Msa0822470:intron 30.0%
! GGATAGGAATGAAATTTGTT+AGG + chr5_3:60904307-60904326 Msa0822470:intron 30.0%
TTAAAAAATAAGGATTCGGC+TGG + chr5_3:60904330-60904349 Msa0822470:intron 30.0%
GATCAATGGCTAAAATTGAA+TGG + chr5_3:60904408-60904427 Msa0822470:intron 30.0%
GAAATGGAGGGAAAATATTA+GGG + chr5_3:60904474-60904493 Msa0822470:intron 30.0%
TAGGGTTAGAAATAGCTATA+TGG + chr5_3:60904492-60904511 Msa0822470:intron 30.0%
AGGGTTAGAAATAGCTATAT+GGG + chr5_3:60904493-60904512 Msa0822470:intron 30.0%
ACACTTATGAAAATATCTGG+CGG + chr5_3:60904571-60904590 Msa0822470:intron 30.0%
!! TTCATCCTTTACGTTTTTAG+CGG - chr5_3:60904787-60904806 None:intergenic 30.0%
AAAAACGTAAAGGATGAATC+TGG + chr5_3:60904789-60904808 Msa0822470:intron 30.0%
AAAACGTAAAGGATGAATCT+GGG + chr5_3:60904790-60904809 Msa0822470:intron 30.0%
ATAGAGAGAAAAAGATGAAG+AGG + chr5_3:60905101-60905120 Msa0822470:intron 30.0%
TAGAGAGAAAAAGATGAAGA+GGG + chr5_3:60905102-60905121 Msa0822470:intron 30.0%
!! TCTTCTAGTTTCTTCATTGA+GGG - chr5_3:60905162-60905181 None:intergenic 30.0%
TAAAAGTCATTTGGACTTAC+AGG - chr5_3:60905190-60905209 None:intergenic 30.0%
GTCTTTACATAGATTCTAGA+TGG - chr5_3:60905358-60905377 None:intergenic 30.0%
ACAACATTAATGCTGAGATT+TGG + chr5_3:60905413-60905432 Msa0822470:intron 30.0%
CAACATTAATGCTGAGATTT+GGG + chr5_3:60905414-60905433 Msa0822470:intron 30.0%
AACATTAATGCTGAGATTTG+GGG + chr5_3:60905415-60905434 Msa0822470:intron 30.0%
AGTAGTATAATAGTATGCTC+AGG - chr5_3:60905468-60905487 None:intergenic 30.0%
! GCTCTGAATGTTTCTTATAA+TGG - chr5_3:60905627-60905646 None:intergenic 30.0%
TGGTGTATAAAGTACACAAT+AGG - chr5_3:60905676-60905695 None:intergenic 30.0%
ACATAAATGTTTGTGTTGTG+TGG - chr5_3:60905855-60905874 None:intergenic 30.0%
ACACAACACAAACATTTATG+TGG + chr5_3:60905854-60905873 Msa0822470:intron 30.0%
!! TATCAAGCTTTAAGCACATA+TGG + chr5_3:60906214-60906233 Msa0822470:intron 30.0%
GGTGATGAATAATTAGATCA+GGG + chr5_3:60906400-60906419 Msa0822470:intron 30.0%
CTTATAATAGTGATGTTTGG+TGG - chr5_3:60906499-60906518 None:intergenic 30.0%
!! GCAATGGATTGATTTACATT+AGG + chr5_3:60906704-60906723 Msa0822470:intron 30.0%
!!! GGTGTGTATTTTTTGTATGA+TGG - chr5_3:60906979-60906998 None:intergenic 30.0%
!!! TCTGAGTCTTTTTTCACATT+TGG - chr5_3:60907000-60907019 None:intergenic 30.0%
! TTTGTGAAAGTCAAGTATTG+TGG - chr5_3:60907087-60907106 None:intergenic 30.0%
GAAACCAAACCATTCATTAA+TGG + chr5_3:60907135-60907154 Msa0822470:CDS 30.0%
ATGTCCATTAATGAATGGTT+TGG - chr5_3:60907142-60907161 None:intergenic 30.0%
TCATCATGTCCATTAATGAA+TGG - chr5_3:60907147-60907166 None:intergenic 30.0%
GAAATGAGTGGTTAAATCTT+TGG - chr5_3:60907170-60907189 None:intergenic 30.0%
TTGGAATGATCAAAATGTTG+TGG + chr5_3:60907248-60907267 Msa0822470:CDS 30.0%
! ATAAACCTTTGATGGATCAA+AGG - chr5_3:60907328-60907347 None:intergenic 30.0%
TTGATGAGTTCAATTCGAAG+AGG - chr5_3:60901088-60901107 None:intergenic 35.0%
ATATGAAGAAGCTAGTACTG+TGG + chr5_3:60901791-60901810 Msa0822470:intron 35.0%
TATGAAGAAGCTAGTACTGT+GGG + chr5_3:60901792-60901811 Msa0822470:intron 35.0%
GAAAATACAGGAACAGCATA+AGG + chr5_3:60901850-60901869 Msa0822470:CDS 35.0%
CATTGGACTCAAGAAATCAT+TGG + chr5_3:60901956-60901975 Msa0822470:CDS 35.0%
! ATGCATCATCCAATCAGTTT+TGG - chr5_3:60902012-60902031 None:intergenic 35.0%
!!! TGCTAGTTTTTCCTTTAGGT+GGG - chr5_3:60902046-60902065 None:intergenic 35.0%
!!! TTGCTAGTTTTTCCTTTAGG+TGG - chr5_3:60902047-60902066 None:intergenic 35.0%
TTCCTAGGAACCATAAAGAT+AGG + chr5_3:60902395-60902414 Msa0822470:intron 35.0%
TCCTAGGAACCATAAAGATA+GGG + chr5_3:60902396-60902415 Msa0822470:intron 35.0%
GAATTTATTCCCATCTCCAT+AGG + chr5_3:60902444-60902463 Msa0822470:intron 35.0%
GAATAAAGTTCCTATGGAGA+TGG - chr5_3:60902457-60902476 None:intergenic 35.0%
ACTCTTAAGCATGTGTTCAT+TGG + chr5_3:60902577-60902596 Msa0822470:intron 35.0%
!! TCATTGGTTTGATTCATGAG+TGG + chr5_3:60902593-60902612 Msa0822470:intron 35.0%
TAGTCTCTGACTTCTAGATA+TGG + chr5_3:60902708-60902727 Msa0822470:intron 35.0%
GTGAAGAAGAAGATTTAGAG+AGG + chr5_3:60902776-60902795 Msa0822470:intron 35.0%
!! AAAGCTCTAAGGTGTTGTTA+TGG + chr5_3:60903304-60903323 Msa0822470:intron 35.0%
!! AAGCTCTAAGGTGTTGTTAT+GGG + chr5_3:60903305-60903324 Msa0822470:intron 35.0%
TATACAAACGATGACACAAC+AGG + chr5_3:60904010-60904029 Msa0822470:intron 35.0%
TATCAGCGAGGAGAAATATT+AGG + chr5_3:60904049-60904068 Msa0822470:intron 35.0%
ATCAGCGAGGAGAAATATTA+GGG + chr5_3:60904050-60904069 Msa0822470:intron 35.0%
! ACTTGATAACAAAATTCGGC+TGG + chr5_3:60904368-60904387 Msa0822470:intron 35.0%
GGAAATGGAGGGAAAATATT+AGG + chr5_3:60904473-60904492 Msa0822470:intron 35.0%
GCCGTTATATGCTATTAACT+TGG - chr5_3:60904832-60904851 None:intergenic 35.0%
! TTTGATTTCTCGTCTTCTTG+CGG - chr5_3:60904980-60904999 None:intergenic 35.0%
ATTTCATCATCTAAGTGTGG+TGG - chr5_3:60905032-60905051 None:intergenic 35.0%
GTGATTTCATCATCTAAGTG+TGG - chr5_3:60905035-60905054 None:intergenic 35.0%
!! CTTCTAGTTTCTTCATTGAG+GGG - chr5_3:60905161-60905180 None:intergenic 35.0%
!! CTCTTCTAGTTTCTTCATTG+AGG - chr5_3:60905163-60905182 None:intergenic 35.0%
TCATCTTTGATGTGGATTCT+AGG + chr5_3:60905569-60905588 Msa0822470:intron 35.0%
CATCTTTGATGTGGATTCTA+GGG + chr5_3:60905570-60905589 Msa0822470:intron 35.0%
TGTTTCTTATAATGGTCCAC+CGG - chr5_3:60905619-60905638 None:intergenic 35.0%
GTATGGGTGACATTAAATCT+GGG - chr5_3:60905820-60905839 None:intergenic 35.0%
TGTATGGGTGACATTAAATC+TGG - chr5_3:60905821-60905840 None:intergenic 35.0%
ACTTCAGTGACATAATGTCA+CGG - chr5_3:60905896-60905915 None:intergenic 35.0%
TTGACATGAAGTTAGAAAGG+GGG - chr5_3:60905924-60905943 None:intergenic 35.0%
CTTGACATGAAGTTAGAAAG+GGG - chr5_3:60905925-60905944 None:intergenic 35.0%
CCTTGACATGAAGTTAGAAA+GGG - chr5_3:60905926-60905945 None:intergenic 35.0%
CCTTTCTAACTTCATGTCAA+GGG + chr5_3:60905924-60905943 Msa0822470:intron 35.0%
ATTGTTCTTTCTCTCTCTCA+CGG - chr5_3:60906352-60906371 None:intergenic 35.0%
GAAAGAAGTTAGATCTGATG+CGG + chr5_3:60906379-60906398 Msa0822470:intron 35.0%
CGGTGATGAATAATTAGATC+AGG + chr5_3:60906399-60906418 Msa0822470:intron 35.0%
! AGGGAGACTGATTTAATCTA+AGG + chr5_3:60906419-60906438 Msa0822470:intron 35.0%
! GGGAGACTGATTTAATCTAA+GGG + chr5_3:60906420-60906439 Msa0822470:intron 35.0%
GGTTAAATTAAGTGGTACAC+CGG + chr5_3:60906441-60906460 Msa0822470:intron 35.0%
TGGACGTATCAAAATCTTTC+AGG + chr5_3:60906768-60906787 Msa0822470:intron 35.0%
! AGATTCTATGCTGCATGTTT+TGG - chr5_3:60907052-60907071 None:intergenic 35.0%
GTTTACCTTTGATCCATCAA+AGG + chr5_3:60907320-60907339 Msa0822470:CDS 35.0%
CATTCAATAAAGGAGTAGGT+GGG - chr5_3:60907457-60907476 None:intergenic 35.0%
CACCTACTCCTTTATTGAAT+GGG + chr5_3:60907456-60907475 Msa0822470:three_prime_UTR 35.0%
TACCCATTCAATAAAGGAGT+AGG - chr5_3:60907461-60907480 None:intergenic 35.0%
AAGATGAAGTTGTGCTTCCT+GGG + chr5_3:60900996-60901015 Msa0822470:CDS 40.0%
CAACAAGCTCTTCATCTGTT+GGG - chr5_3:60901033-60901052 None:intergenic 40.0%
ATCTTACTTGGTAGATCCCA+TGG - chr5_3:60901136-60901155 None:intergenic 40.0%
ATAAAGCAGTCGTAGAGATC+GGG - chr5_3:60901254-60901273 None:intergenic 40.0%
CATAAAGCAGTCGTAGAGAT+CGG - chr5_3:60901255-60901274 None:intergenic 40.0%
TAGGCTATGGATCTATAGGT+AGG + chr5_3:60901678-60901697 Msa0822470:intron 40.0%
ATGAAGAAGCTAGTACTGTG+GGG + chr5_3:60901793-60901812 Msa0822470:intron 40.0%
ATAAGGCCTAATAGAGTGAC+AGG + chr5_3:60901867-60901886 Msa0822470:CDS 40.0%
!! TCTGGATTTTGGAAAGCTAC+AGG + chr5_3:60901891-60901910 Msa0822470:CDS 40.0%
!! CTGGATTTTGGAAAGCTACA+GGG + chr5_3:60901892-60901911 Msa0822470:CDS 40.0%
! TTTATTACCGTGGAAGTGCA+GGG + chr5_3:60901979-60901998 Msa0822470:CDS 40.0%
TCGTTATCGAGTCACATTGT+TGG - chr5_3:60902243-60902262 None:intergenic 40.0%
ACTCGATAACGAGTCTCTTA+GGG + chr5_3:60902251-60902270 Msa0822470:intron 40.0%
TCCCTATCTTTATGGTTCCT+AGG - chr5_3:60902400-60902419 None:intergenic 40.0%
GGGTGAGAATAAAGTTCCTA+TGG - chr5_3:60902463-60902482 None:intergenic 40.0%
TACAAAACCCGTACATCGTA+CGG - chr5_3:60902966-60902985 None:intergenic 40.0%
GTCTAGTGGTAAAAGCTCTA+AGG + chr5_3:60903293-60903312 Msa0822470:intron 40.0%
!! AAGGTGTTGTTATGGGTAGT+TGG + chr5_3:60903312-60903331 Msa0822470:intron 40.0%
ATATTTAGACCCGCCCAAAA+AGG + chr5_3:60903369-60903388 Msa0822470:intron 40.0%
TATTTAGACCCGCCCAAAAA+GGG + chr5_3:60903370-60903389 Msa0822470:intron 40.0%
TATGTCAACGTGTGGAAAGA+CGG + chr5_3:60903692-60903711 Msa0822470:intron 40.0%
! AGGGATTGCTGCATTTTAGA+AGG + chr5_3:60904069-60904088 Msa0822470:intron 40.0%
CCATTGGATCTTGCACATTT+AGG - chr5_3:60904436-60904455 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG + chr5_3:60904433-60904452 Msa0822470:intron 40.0%
!! GGGACAAAAGAAGTGTCATA+TGG - chr5_3:60905696-60905715 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG + chr5_3:60905768-60905787 Msa0822470:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr5_3:60905769-60905788 Msa0822470:intron 40.0%
! ACACAAAAGTGTGTGTTGTG+TGG - chr5_3:60905795-60905814 None:intergenic 40.0%
! ACACAACACACACTTTTGTG+TGG + chr5_3:60905794-60905813 Msa0822470:intron 40.0%
GTCACGGTGACATTAAATCT+AGG - chr5_3:60905880-60905899 None:intergenic 40.0%
CCCTTTCTAACTTCATGTCA+AGG + chr5_3:60905923-60905942 Msa0822470:intron 40.0%
CCCTTGACATGAAGTTAGAA+AGG - chr5_3:60905927-60905946 None:intergenic 40.0%
TTCTAACTTCATGTCAAGGG+TGG + chr5_3:60905927-60905946 Msa0822470:intron 40.0%
CAGCTTCAGCATATCAAATG+AGG + chr5_3:60905965-60905984 Msa0822470:intron 40.0%
ACAATATTGAACCAGGAAGC+AGG - chr5_3:60906255-60906274 None:intergenic 40.0%
AAGCAGAAGAGAGAAAACGA+TGG + chr5_3:60906296-60906315 Msa0822470:intron 40.0%
AGCAGAAGAGAGAAAACGAT+GGG + chr5_3:60906297-60906316 Msa0822470:intron 40.0%
!! GTGATGTTTGGTGGATTCTA+GGG - chr5_3:60906490-60906509 None:intergenic 40.0%
!! AGTGATGTTTGGTGGATTCT+AGG - chr5_3:60906491-60906510 None:intergenic 40.0%
CTGTATGGAATTTGCATTGC+AGG + chr5_3:60906918-60906937 Msa0822470:intron 40.0%
AATTTGCATTGCAGGAAGTG+TGG + chr5_3:60906926-60906945 Msa0822470:intron 40.0%
GAAGAGTTAATAGCGAATGC+TGG - chr5_3:60907024-60907043 None:intergenic 40.0%
AAAACTTGAGTGAGACAAGG+TGG - chr5_3:60907229-60907248 None:intergenic 40.0%
CCAAAAACTTGAGTGAGACA+AGG - chr5_3:60907232-60907251 None:intergenic 40.0%
! CCTTGTCTCACTCAAGTTTT+TGG + chr5_3:60907229-60907248 Msa0822470:CDS 40.0%
CCATTCAATAAAGGAGTAGG+TGG - chr5_3:60907458-60907477 None:intergenic 40.0%
CCACCTACTCCTTTATTGAA+TGG + chr5_3:60907455-60907474 Msa0822470:three_prime_UTR 40.0%
CACTGGTACCCATTCAATAA+AGG - chr5_3:60907467-60907486 None:intergenic 40.0%
GAAGATGAAGTTGTGCTTCC+TGG + chr5_3:60900995-60901014 Msa0822470:CDS 45.0%
CCAACAAGCTCTTCATCTGT+TGG - chr5_3:60901034-60901053 None:intergenic 45.0%
CCAACAGATGAAGAGCTTGT+TGG + chr5_3:60901031-60901050 Msa0822470:CDS 45.0%
CGATCTCTACGACTGCTTTA+TGG + chr5_3:60901253-60901272 Msa0822470:intron 45.0%
!! AAAGGTGTTATCGGATGCAG+TGG + chr5_3:60901448-60901467 Msa0822470:intron 45.0%
TGAAGAAGCTAGTACTGTGG+GGG + chr5_3:60901794-60901813 Msa0822470:intron 45.0%
CCAGATCCTGTCACTCTATT+AGG - chr5_3:60901876-60901895 None:intergenic 45.0%
CCTAATAGAGTGACAGGATC+TGG + chr5_3:60901873-60901892 Msa0822470:CDS 45.0%
! GAGTGACAGGATCTGGATTT+TGG + chr5_3:60901880-60901899 Msa0822470:CDS 45.0%
! GTTTATTACCGTGGAAGTGC+AGG + chr5_3:60901978-60901997 Msa0822470:CDS 45.0%
!! GGAAAGGCACCAAAACTGAT+TGG + chr5_3:60902000-60902019 Msa0822470:CDS 45.0%
GAATTTCGTCTCCCACCTAA+AGG + chr5_3:60902032-60902051 Msa0822470:CDS 45.0%
GACTCGATAACGAGTCTCTT+AGG + chr5_3:60902250-60902269 Msa0822470:intron 45.0%
ACTCTAACCCGTACGATGTA+CGG + chr5_3:60902955-60902974 Msa0822470:intron 45.0%
ACAAAACCCGTACATCGTAC+GGG - chr5_3:60902965-60902984 None:intergenic 45.0%
ATGTCAACGTGTGGAAAGAC+GGG + chr5_3:60903693-60903712 Msa0822470:intron 45.0%
GATCCAATGGCTCAGAAAAG+TGG + chr5_3:60904446-60904465 Msa0822470:intron 45.0%
CAATGGCTCAGAAAAGTGGA+GGG + chr5_3:60904450-60904469 Msa0822470:intron 45.0%
AATGGCTCAGAAAAGTGGAG+GGG + chr5_3:60904451-60904470 Msa0822470:intron 45.0%
CAACGCCGCTAAAAACGTAA+AGG + chr5_3:60904779-60904798 Msa0822470:intron 45.0%
TAAAGTGGCCGGAATATCCA+TGG + chr5_3:60904881-60904900 Msa0822470:intron 45.0%
! TTGTTGTTCGTCGTCTTGTG+CGG - chr5_3:60905008-60905027 None:intergenic 45.0%
! CTTCATTGAGGGGTGGTTTT+GGG - chr5_3:60905151-60905170 None:intergenic 45.0%
! TCTTCATTGAGGGGTGGTTT+TGG - chr5_3:60905152-60905171 None:intergenic 45.0%
CTAGTTTCTTCATTGAGGGG+TGG - chr5_3:60905158-60905177 None:intergenic 45.0%
!! TTGATGTGGATTCTAGGGTG+AGG + chr5_3:60905575-60905594 Msa0822470:intron 45.0%
!! TGATGTGGATTCTAGGGTGA+GGG + chr5_3:60905576-60905595 Msa0822470:intron 45.0%
TTATAATGGTCCACCGGTGA+GGG - chr5_3:60905613-60905632 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr5_3:60905813-60905832 None:intergenic 45.0%
TGTCACCCATACAACACATC+TGG + chr5_3:60905828-60905847 Msa0822470:intron 45.0%
GTCACCCATACAACACATCT+GGG + chr5_3:60905829-60905848 Msa0822470:intron 45.0%
GCAGAAGAGAGAAAACGATG+GGG + chr5_3:60906298-60906317 Msa0822470:intron 45.0%
AATTAAGTGGTACACCGGTG+AGG + chr5_3:60906446-60906465 Msa0822470:intron 45.0%
ATTAAGTGGTACACCGGTGA+GGG + chr5_3:60906447-60906466 Msa0822470:intron 45.0%
!! TTTGGTGGATTCTAGGGTGA+GGG - chr5_3:60906484-60906503 None:intergenic 45.0%
CGCTTATAATAGAGACCGCA+AGG + chr5_3:60906618-60906637 Msa0822470:intron 45.0%
AATAAAGGAGTAGGTGGGAC+CGG - chr5_3:60907452-60907471 None:intergenic 45.0%
!! AATATTTGATTAAAAAAAAA+AGG + chr5_3:60904283-60904302 Msa0822470:intron 5.0%
!!! TTCTTTTTTTTTTTTTTTTT+AGG + chr5_3:60905250-60905269 Msa0822470:intron 5.0%
!!! TCTTTTTTTTTTTTTTTTTA+GGG + chr5_3:60905251-60905270 Msa0822470:intron 5.0%
GTTGGGTGGAATCTAAACCC+AGG - chr5_3:60901016-60901035 None:intergenic 50.0%
CAAGCTCTTCATCTGTTGGG+TGG - chr5_3:60901030-60901049 None:intergenic 50.0%
GTTCCTTTCTCGCAGTACAG+CGG + chr5_3:60901403-60901422 Msa0822470:intron 50.0%
GAGTGGTGTGTTTATGCGAG+TGG + chr5_3:60902610-60902629 Msa0822470:intron 50.0%
CTCTAACCCGTACGATGTAC+GGG + chr5_3:60902956-60902975 Msa0822470:intron 50.0%
! ACCCTAATCCCGCCCTTTTT+GGG - chr5_3:60903385-60903404 None:intergenic 50.0%
! AACCCTAATCCCGCCCTTTT+TGG - chr5_3:60903386-60903405 None:intergenic 50.0%
!! CCTCCACTTTTCTGAGCCAT+TGG - chr5_3:60904452-60904471 None:intergenic 50.0%
CCAATGGCTCAGAAAAGTGG+AGG + chr5_3:60904449-60904468 Msa0822470:intron 50.0%
ATGGCTCAGAAAAGTGGAGG+GGG + chr5_3:60904452-60904471 Msa0822470:intron 50.0%
CAGAAAAGTGGAGGGGGAAA+TGG + chr5_3:60904458-60904477 Msa0822470:intron 50.0%
AAAAGTGGAGGGGGAAATGG+AGG + chr5_3:60904461-60904480 Msa0822470:intron 50.0%
AAAGTGGAGGGGGAAATGGA+GGG + chr5_3:60904462-60904481 Msa0822470:intron 50.0%
TCCGGATGCCATGGATATTC+CGG - chr5_3:60904892-60904911 None:intergenic 50.0%
! GATGAAGAGGGCGTGATTTC+AGG + chr5_3:60905114-60905133 Msa0822470:intron 50.0%
GGATCTAACAAGTCCCTCAC+CGG + chr5_3:60905597-60905616 Msa0822470:intron 50.0%
CTTATAATGGTCCACCGGTG+AGG - chr5_3:60905614-60905633 None:intergenic 50.0%
! TATGTCACCAAAGTGCCACC+CGG - chr5_3:60905747-60905766 None:intergenic 50.0%
GTGGCCCAGATGTGTTGTAT+GGG - chr5_3:60905836-60905855 None:intergenic 50.0%
TGTGGCCCAGATGTGTTGTA+TGG - chr5_3:60905837-60905856 None:intergenic 50.0%
CTCTTGTTAAGCCTGCTTCC+TGG + chr5_3:60906241-60906260 Msa0822470:intron 50.0%
!! GTTTGGTGGATTCTAGGGTG+AGG - chr5_3:60906485-60906504 None:intergenic 50.0%
!! TCACGTTGGCTCTCTAGCAA+TGG + chr5_3:60906688-60906707 Msa0822470:intron 50.0%
GAGTGAGACAAGGTGGTTGT+TGG - chr5_3:60907222-60907241 None:intergenic 50.0%
AGCTAGTACTGTGGGGGAGA+AGG + chr5_3:60901800-60901819 Msa0822470:CDS 55.0%
! TACCGTGGAAGTGCAGGGAA+AGG + chr5_3:60901984-60902003 Msa0822470:CDS 55.0%
TGCCTTTCCCTGCACTTCCA+CGG - chr5_3:60901989-60902008 None:intergenic 55.0%
TTAGACCCGCCCAAAAAGGG+CGG + chr5_3:60903373-60903392 Msa0822470:intron 55.0%
!! TAATCCCGCCCTTTTTGGGC+GGG - chr5_3:60903381-60903400 None:intergenic 55.0%
!! CTAATCCCGCCCTTTTTGGG+CGG - chr5_3:60903382-60903401 None:intergenic 55.0%
GCCCAAAAAGGGCGGGATTA+GGG + chr5_3:60903381-60903400 Msa0822470:intron 55.0%
GCCGGAATATCCATGGCATC+CGG + chr5_3:60904888-60904907 Msa0822470:intron 55.0%
TCTAACAAGTCCCTCACCGG+TGG + chr5_3:60905600-60905619 Msa0822470:intron 55.0%
AGGAAGAGGCTAGAGCGAGA+GGG - chr5_3:60905716-60905735 None:intergenic 55.0%
! ATGTCACCAAAGTGCCACCC+GGG - chr5_3:60905746-60905765 None:intergenic 55.0%
GGCTCTGTTAAGTCCCTCAC+CGG - chr5_3:60906463-60906482 None:intergenic 55.0%
GCACCGCTGTACTGCGAGAA+AGG - chr5_3:60901409-60901428 None:intergenic 60.0%
TAGACCCGCCCAAAAAGGGC+GGG + chr5_3:60903374-60903393 Msa0822470:intron 60.0%
CGCCCAAAAAGGGCGGGATT+AGG + chr5_3:60903380-60903399 Msa0822470:intron 60.0%
CGTTGCAGATCCGGATGCCA+TGG - chr5_3:60904901-60904920 None:intergenic 60.0%
GGGCGTCAACGTTGCAGATC+CGG - chr5_3:60904910-60904929 None:intergenic 60.0%
GAGGAAGAGGCTAGAGCGAG+AGG - chr5_3:60905717-60905736 None:intergenic 60.0%
AGCCTCTTCCTCCCCTTTCC+CGG + chr5_3:60905725-60905744 Msa0822470:intron 60.0%
! CAAAGTGCCACCCGGGAAAG+GGG - chr5_3:60905739-60905758 None:intergenic 60.0%
! CCAAAGTGCCACCCGGGAAA+GGG - chr5_3:60905740-60905759 None:intergenic 60.0%
! ACCAAAGTGCCACCCGGGAA+AGG - chr5_3:60905741-60905760 None:intergenic 60.0%
GCCTCTTCCTCCCCTTTCCC+GGG + chr5_3:60905726-60905745 Msa0822470:intron 65.0%
ACCCGGGAAAGGGGAGGAAG+AGG - chr5_3:60905730-60905749 None:intergenic 65.0%
TCTTCCTCCCCTTTCCCGGG+TGG + chr5_3:60905729-60905748 Msa0822470:intron 65.0%
CCCTTTCCCGGGTGGCACTT+TGG + chr5_3:60905737-60905756 Msa0822470:intron 65.0%
AGTGCCACCCGGGAAAGGGG+AGG - chr5_3:60905736-60905755 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 60900932 60907490 60900932 ID=Msa0822470;Name=Msa0822470
chr5_3 mRNA 60900932 60907490 60900932 ID=Msa0822470-mRNA-1;Parent=Msa0822470;Name=Msa0822470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=24|1|1|1|1|1|3|122|309
chr5_3 exon 60900932 60901148 60900932 ID=Msa0822470-mRNA-1:exon:18690;Parent=Msa0822470-mRNA-1
chr5_3 exon 60901799 60902106 60901799 ID=Msa0822470-mRNA-1:exon:18691;Parent=Msa0822470-mRNA-1
chr5_3 exon 60906940 60907490 60906940 ID=Msa0822470-mRNA-1:exon:18692;Parent=Msa0822470-mRNA-1
chr5_3 five_prime_UTR 60900932 60900955 60900932 ID=Msa0822470-mRNA-1:five_prime_utr;Parent=Msa0822470-mRNA-1
chr5_3 CDS 60900956 60901148 60900956 ID=Msa0822470-mRNA-1:cds;Parent=Msa0822470-mRNA-1
chr5_3 CDS 60901799 60902106 60901799 ID=Msa0822470-mRNA-1:cds;Parent=Msa0822470-mRNA-1
chr5_3 CDS 60906940 60907368 60906940 ID=Msa0822470-mRNA-1:cds;Parent=Msa0822470-mRNA-1
chr5_3 three_prime_UTR 60907369 60907490 60907369 ID=Msa0822470-mRNA-1:three_prime_utr;Parent=Msa0822470-mRNA-1
Gene Sequence

>Msa0822470

ATGGATGTGGCAAAGTTAGATAACTTTGATGACAAGAAAGAAGATGAAGTTGTGCTTCCTGGGTTTAGATTCCACCCAACAGATGAAGAGCTTGTTGGATTTTATCTACGGCGAAAAGTGAAGAAGAAGCCTCTTCGAATTGAACTCATCAAAGAGATTGACATATACAAATATGATCCATGGGATCTACCAAAAGCTAGTACTGTGGGGGAGAAGGAATGTTATTTCTTTTGTTTAAGAGGAAGAAAATACAGGAACAGCATAAGGCCTAATAGAGTGACAGGATCTGGATTTTGGAAAGCTACAGGGATTGATAAACCTATATATTGTGTTAAAGAATCACATGAATGCATTGGACTCAAGAAATCATTGGTTTATTACCGTGGAAGTGCAGGGAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGTCTCCCACCTAAAGGAAAAACTAGCAATAATCCACTTCTTAATCATAGCAATGATATTCAAGAAGCTGAAGTGTGGACACTATGCAGAATATTCAAACGAATCCCATCATACAAAAAATACACACCAAATGTGAAAAAAGACTCAGAACCAGCATTCGCTATTAACTCTTCAAGTTCCAAAACATGCAGCATAGAATCTGACAACAGCAAACCACAATACTTGACTTTCACAAACTCACAACATGTTGTTCAACAGAATCATGAAACCAAACCATTCATTAATGGACATGATGACCAAAGATTTAACCACTCATTTCTAAATCAATTAGGCAATGTAGCACAAGTTCCAACAACCACCTTGTCTCACTCAAGTTTTTGGAATGATCAAAATGTTGTGGATGATGCATTTGCAAATGATAATTGGGATGATCTTACATCTGTTGTTCAGTTTACCTTTGATCCATCAAAGGTTTATGATTGTAAAGATTTTAATTAG
Protein sequence

>Msa0822470

MDVAKLDNFDDKKEDEVVLPGFRFHPTDEELVGFYLRRKVKKKPLRIELIKEIDIYKYDPWDLPKASTVGEKECYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKESHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPKGKTSNNPLLNHSNDIQEAEVWTLCRIFKRIPSYKKYTPNVKKDSEPAFAINSSSSKTCSIESDNSKPQYLTFTNSQHVVQQNHETKPFINGHDDQRFNHSFLNQLGNVAQVPTTTLSHSSFWNDQNVVDDAFANDNWDDLTSVVQFTFDPSKVYDCKDFN*