AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0823230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 106 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCTCGTGTCAAAGATTT+TGG 0.180958 5_3:+61885065 Msa0823230:three_prime_UTR
TATAGAAACTTAGAGAATTT+TGG 0.185509 5_3:+61885493 Msa0823230:three_prime_UTR
GCTAGTGAGTAAAGACTTAA+AGG 0.190975 5_3:-61884949 None:intergenic
GACGCTTCCCGCGTTTCTTC+TGG 0.262645 5_3:-61885262 None:intergenic
TCCTAAAGTTGCTTCGAGTT+TGG 0.279185 5_3:+61884815 Msa0823230:three_prime_UTR
TATGCGCACTATATTTGATT+TGG 0.290390 5_3:+61884536 Msa0823230:three_prime_UTR
CCTAAAGTTGCTTCGAGTTT+GGG 0.302689 5_3:+61884816 Msa0823230:three_prime_UTR
CCCAAACTCGAAGCAACTTT+AGG 0.324461 5_3:-61884816 None:intergenic
TATAATAATTCGATATTAAG+AGG 0.324633 5_3:-61883678 None:intergenic
ACAACAGCACTCCATTGATT+AGG 0.327716 5_3:-61884489 None:intergenic
CATTCAGAGGTTACTGTTGA+TGG 0.334111 5_3:+61885014 Msa0823230:three_prime_UTR
GAGTAAACCTTGTGTGATAT+TGG 0.347782 5_3:-61884151 None:intergenic
GCTTCGAGTTTGGGAAATAT+TGG 0.355075 5_3:+61884825 Msa0823230:three_prime_UTR
ATATGAAATTCCAGAGAGTT+AGG 0.359653 5_3:+61884298 Msa0823230:three_prime_UTR
TGGAGACGCGCATTGGCAAC+AGG 0.362282 5_3:-61884079 None:intergenic
TGATCTATTGGAGGAGCAGC+TGG 0.364240 5_3:+61885361 Msa0823230:three_prime_UTR
CACTATATTTGATTTGGAAC+AGG 0.370247 5_3:+61884542 Msa0823230:three_prime_UTR
ACTCACTAGCAAAGAGTTAG+TGG 0.372541 5_3:+61884962 Msa0823230:three_prime_UTR
AAATTTGGTGACCATGCTTT+TGG 0.374828 5_3:+61885137 Msa0823230:three_prime_UTR
CAACAGCACTCCATTGATTA+GGG 0.376117 5_3:-61884488 None:intergenic
ATTTAATATCAAGACTCATC+TGG 0.383930 5_3:+61885103 Msa0823230:three_prime_UTR
GATTCCTTCTAGATCATTTG+AGG 0.411291 5_3:-61885291 None:intergenic
GTTCAGAAAGAGGTTATGAA+TGG 0.422109 5_3:+61884384 Msa0823230:three_prime_UTR
AAACAGCGTGCCGATGTAAT+CGG 0.426263 5_3:-61884897 None:intergenic
GTCCTATTGTGATTTGTACT+AGG 0.431373 5_3:+61884847 Msa0823230:three_prime_UTR
TCCTATTGTGATTTGTACTA+GGG 0.431610 5_3:+61884848 Msa0823230:three_prime_UTR
AGTTTCTATATCAGCTTGTC+AGG 0.432340 5_3:-61885480 None:intergenic
TGCTCCTCCAATAGATCATA+AGG 0.436724 5_3:-61885356 None:intergenic
AGAGCTACCTTATGATCTAT+TGG 0.437768 5_3:+61885349 Msa0823230:three_prime_UTR
TCTTAGTTGGTGATATGTAT+TGG 0.440006 5_3:+61884919 Msa0823230:three_prime_UTR
AAGATGATCGGCTTATCATT+AGG 0.441042 5_3:+61885320 Msa0823230:three_prime_UTR
TCGTCCTCAAATGATCTAGA+AGG 0.441149 5_3:+61885287 Msa0823230:three_prime_UTR
ATCAAATCCCCACGACAAAC+AGG 0.446099 5_3:-61884783 None:intergenic
TTGCTTATTGCGGCGCCGTA+AGG 0.457438 5_3:-61883819 None:intergenic
TCGAGTCGGGTTCAGTTGGA+AGG 0.458339 5_3:-61884338 None:intergenic
TCGGCACGCTGTTTCTTAGT+TGG 0.464891 5_3:+61884906 Msa0823230:three_prime_UTR
TGGTGATAGTGAGATTGAAT+TGG 0.470003 5_3:+61885184 Msa0823230:three_prime_UTR
CTAGTGAGTAAAGACTTAAA+GGG 0.474026 5_3:-61884948 None:intergenic
TTGTAAATAGCATTCGCATT+CGG 0.479845 5_3:-61884199 None:intergenic
CGCGCATTGGCAACAGGGAA+TGG 0.483285 5_3:-61884073 None:intergenic
GACTTGTGTGGGGTGAATAG+TGG 0.483488 5_3:+61885164 Msa0823230:three_prime_UTR
GGTTATGAATGGAACAATAG+TGG 0.490331 5_3:+61884395 Msa0823230:three_prime_UTR
CATGTACTAACCTAACTCTC+TGG 0.498661 5_3:-61884308 None:intergenic
TTTAATATCAAGACTCATCT+GGG 0.499567 5_3:+61885104 Msa0823230:three_prime_UTR
ACCCTAGTACAAATCACAAT+AGG 0.501185 5_3:-61884849 None:intergenic
AAATTTGTCCTGTTTGTCGT+GGG 0.512966 5_3:+61884775 Msa0823230:three_prime_UTR
CGAGTCGGGTTCAGTTGGAA+GGG 0.523460 5_3:-61884337 None:intergenic
ATTGAATTGGAGGAGTACAT+AGG 0.524126 5_3:+61885197 Msa0823230:three_prime_UTR
GTATTTGTCAAAATTGTACT+CGG 0.533454 5_3:+61884454 Msa0823230:three_prime_UTR
TGATAGTGAGATTGAATTGG+AGG 0.536096 5_3:+61885187 Msa0823230:three_prime_UTR
ACATTTGACACACATGTTAG+CGG 0.536562 5_3:-61884115 None:intergenic
TATTAGTTTGATCCAAGTAG+TGG 0.540633 5_3:-61884226 None:intergenic
ACAACCACCTCCTCCTTCAC+AGG 0.545135 5_3:+61883851 Msa0823230:CDS
TGTGAGGATTTGTGATGGTA+AGG 0.546264 5_3:+61884692 Msa0823230:three_prime_UTR
GTTCGGTTTGGCTAATGTTG+AGG 0.547278 5_3:+61885043 Msa0823230:three_prime_UTR
TGTTGCCACTCCATTGCAGA+GGG 0.547819 5_3:-61883793 None:intergenic
AATGTCAAGATGCATACCAT+TGG 0.548934 5_3:+61884023 Msa0823230:CDS
GTTCGAGTGGAGACGCGCAT+TGG 0.549381 5_3:-61884086 None:intergenic
ATTAGTTTGATCCAAGTAGT+GGG 0.552372 5_3:-61884225 None:intergenic
GAAATTTGTCCTGTTTGTCG+TGG 0.553561 5_3:+61884774 Msa0823230:three_prime_UTR
TGAATGCTAACCCTAATCAA+TGG 0.555269 5_3:+61884478 Msa0823230:three_prime_UTR
GGAATCTATGATAAGATGAT+CGG 0.567757 5_3:+61885308 Msa0823230:three_prime_UTR
TTAGCGGTGTTTAGTTCGAG+TGG 0.569875 5_3:-61884099 None:intergenic
GGTAAGGAGCTTGTTTCTTG+TGG 0.571884 5_3:+61884708 Msa0823230:three_prime_UTR
GTGTTGCCACTCCATTGCAG+AGG 0.575146 5_3:-61883794 None:intergenic
TTGATAACCCTAACCTGTGA+AGG 0.575516 5_3:-61883864 None:intergenic
AGAAACGCCAGAAGAAACGC+GGG 0.576178 5_3:+61885255 Msa0823230:three_prime_UTR
TAGTTTGATCCAAGTAGTGG+GGG 0.576339 5_3:-61884223 None:intergenic
GCTACCTTATGATCTATTGG+AGG 0.578421 5_3:+61885352 Msa0823230:three_prime_UTR
TAGTTGGTGATATGTATTGG+AGG 0.578584 5_3:+61884922 Msa0823230:three_prime_UTR
GCATCAGAAACCCTCTGCAA+TGG 0.586753 5_3:+61883783 Msa0823230:CDS
TATTTGTCAAAATTGTACTC+GGG 0.589875 5_3:+61884455 Msa0823230:three_prime_UTR
TTGGAGGAGTACATAGGAGG+TGG 0.593850 5_3:+61885203 Msa0823230:three_prime_UTR
TCGTTGCGAGTTGCTTATTG+CGG 0.596684 5_3:-61883829 None:intergenic
ATTGCAGAGGGTTTCTGATG+CGG 0.597516 5_3:-61883781 None:intergenic
ACAGGGAATGGTGTGGAATG+TGG 0.599860 5_3:-61884061 None:intergenic
CTAACCTGTGAAGGAGGAGG+TGG 0.600100 5_3:-61883855 None:intergenic
TGTCGAGGAGGTTCATTCAG+AGG 0.600213 5_3:+61885001 Msa0823230:three_prime_UTR
AGTTGGTGATATGTATTGGA+GGG 0.602581 5_3:+61884923 Msa0823230:three_prime_UTR
AAACTCGAAGCAACTTTAGG+AGG 0.606354 5_3:-61884813 None:intergenic
CGAAGAGTAAGAAAGTGAGG+AGG 0.607260 5_3:+61885423 Msa0823230:three_prime_UTR
GAATTGGAGGAGTACATAGG+AGG 0.608809 5_3:+61885200 Msa0823230:three_prime_UTR
TTACCATCACAAATCCTCAC+AGG 0.611825 5_3:-61884690 None:intergenic
ACCCTAACCTGTGAAGGAGG+AGG 0.611880 5_3:-61883858 None:intergenic
ATCAAACAAAGCAATCGTGT+TGG 0.612522 5_3:-61884874 None:intergenic
AGGCGAAGAGTAAGAAAGTG+AGG 0.612790 5_3:+61885420 Msa0823230:three_prime_UTR
GATCTATTGGAGGAGCAGCT+GGG 0.615705 5_3:+61885362 Msa0823230:three_prime_UTR
TTTGTTTGATCCGATTACAT+CGG 0.620703 5_3:+61884887 Msa0823230:three_prime_UTR
ATAACCCTAACCTGTGAAGG+AGG 0.627381 5_3:-61883861 None:intergenic
TCTGAATGATGAGGAATCTG+AGG 0.627809 5_3:+61885400 Msa0823230:three_prime_UTR
TTAGTTTGATCCAAGTAGTG+GGG 0.628627 5_3:-61884224 None:intergenic
AAGTCTTCATCTGAATGATG+AGG 0.634247 5_3:+61885391 Msa0823230:three_prime_UTR
GAGAAACGCCAGAAGAAACG+CGG 0.636478 5_3:+61885254 Msa0823230:three_prime_UTR
GGAGACGCGCATTGGCAACA+GGG 0.637001 5_3:-61884078 None:intergenic
ATATGTTGTGCTTGATGTCG+AGG 0.641920 5_3:+61884986 Msa0823230:three_prime_UTR
ACAAGTCATAACCAAAAGCA+TGG 0.643564 5_3:-61885148 None:intergenic
AGTTTGATCCAAGTAGTGGG+GGG 0.647450 5_3:-61884222 None:intergenic
AGAAACCCTCTGCAATGGAG+TGG 0.649231 5_3:+61883788 Msa0823230:CDS
CTATTGGAGGAGCAGCTGGG+TGG 0.657467 5_3:+61885365 Msa0823230:three_prime_UTR
GGAGTGGCAACACCACCTTA+CGG 0.660886 5_3:+61883804 Msa0823230:CDS
ATGATCGGCTTATCATTAGG+TGG 0.673199 5_3:+61885323 Msa0823230:three_prime_UTR
TAAAGGCACAGGTTCCTGTG+AGG 0.699737 5_3:+61884676 Msa0823230:three_prime_UTR
ATTGGCAACAGGGAATGGTG+TGG 0.703792 5_3:-61884068 None:intergenic
GTTCCTGTGAGGATTTGTGA+TGG 0.713156 5_3:+61884687 Msa0823230:three_prime_UTR
AATTTGTCCTGTTTGTCGTG+GGG 0.713440 5_3:+61884776 Msa0823230:three_prime_UTR
TGTTGTGCTTGATGTCGAGG+AGG 0.736408 5_3:+61884989 Msa0823230:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTAATATATTTTAA+AGG + chr5_3:61883732-61883751 Msa0823230:five_prime_UTR 0.0%
!!! TTATTTTTAATATATTTTAA+AGG + chr5_3:61883732-61883751 Msa0823230:five_prime_UTR 0.0%
!! TATAATAATTCGATATTAAG+AGG - chr5_3:61883681-61883700 None:intergenic 15.0%
!! TATAATAATTCGATATTAAG+AGG - chr5_3:61883681-61883700 None:intergenic 15.0%
!! GAAAATTGAATGAATGAAAA+AGG - chr5_3:61883901-61883920 None:intergenic 20.0%
!!! ATCTCAATTTTTCTCTTTTT+CGG + chr5_3:61883923-61883942 Msa0823230:intron 20.0%
!!! TATAGAAACTTAGAGAATTT+TGG + chr5_3:61885493-61885512 Msa0823230:three_prime_UTR 20.0%
!! GAAAATTGAATGAATGAAAA+AGG - chr5_3:61883901-61883920 None:intergenic 20.0%
!!! ATCTCAATTTTTCTCTTTTT+CGG + chr5_3:61883923-61883942 Msa0823230:intron 20.0%
!!! TATAGAAACTTAGAGAATTT+TGG + chr5_3:61885493-61885512 Msa0823230:three_prime_UTR 20.0%
! GTATTTGTCAAAATTGTACT+CGG + chr5_3:61884454-61884473 Msa0823230:three_prime_UTR 25.0%
! TATTTGTCAAAATTGTACTC+GGG + chr5_3:61884455-61884474 Msa0823230:three_prime_UTR 25.0%
! AGAATCAAAAAGATGAAACA+AGG + chr5_3:61884600-61884619 Msa0823230:three_prime_UTR 25.0%
!!! GAAGTTTGTTGATTTTGTAA+AGG + chr5_3:61884659-61884678 Msa0823230:three_prime_UTR 25.0%
! ATTTAATATCAAGACTCATC+TGG + chr5_3:61885103-61885122 Msa0823230:three_prime_UTR 25.0%
! TTTAATATCAAGACTCATCT+GGG + chr5_3:61885104-61885123 Msa0823230:three_prime_UTR 25.0%
!!! GTGCAATTTTAATAAAGAAG+AGG + chr5_3:61885225-61885244 Msa0823230:three_prime_UTR 25.0%
!!! TTTTGGTTTTGTTTATGTCT+AGG + chr5_3:61885510-61885529 Msa0823230:three_prime_UTR 25.0%
! GTATTTGTCAAAATTGTACT+CGG + chr5_3:61884454-61884473 Msa0823230:three_prime_UTR 25.0%
! TATTTGTCAAAATTGTACTC+GGG + chr5_3:61884455-61884474 Msa0823230:three_prime_UTR 25.0%
! AGAATCAAAAAGATGAAACA+AGG + chr5_3:61884600-61884619 Msa0823230:three_prime_UTR 25.0%
!!! GAAGTTTGTTGATTTTGTAA+AGG + chr5_3:61884659-61884678 Msa0823230:three_prime_UTR 25.0%
! ATTTAATATCAAGACTCATC+TGG + chr5_3:61885103-61885122 Msa0823230:three_prime_UTR 25.0%
! TTTAATATCAAGACTCATCT+GGG + chr5_3:61885104-61885123 Msa0823230:three_prime_UTR 25.0%
!!! GTGCAATTTTAATAAAGAAG+AGG + chr5_3:61885225-61885244 Msa0823230:three_prime_UTR 25.0%
!!! TTTTGGTTTTGTTTATGTCT+AGG + chr5_3:61885510-61885529 Msa0823230:three_prime_UTR 25.0%
TACACTTTCGATTTCAAACA+GGG + chr5_3:61883971-61883990 Msa0823230:intron 30.0%
TCAAAAACCAATATCACACA+AGG + chr5_3:61884144-61884163 Msa0823230:three_prime_UTR 30.0%
TTGTAAATAGCATTCGCATT+CGG - chr5_3:61884202-61884221 None:intergenic 30.0%
! ATTAGTTTGATCCAAGTAGT+GGG - chr5_3:61884228-61884247 None:intergenic 30.0%
! TATTAGTTTGATCCAAGTAG+TGG - chr5_3:61884229-61884248 None:intergenic 30.0%
ATATGAAATTCCAGAGAGTT+AGG + chr5_3:61884298-61884317 Msa0823230:three_prime_UTR 30.0%
! CTGAACAAAAACCTTGATTT+TGG - chr5_3:61884370-61884389 None:intergenic 30.0%
TATGCGCACTATATTTGATT+TGG + chr5_3:61884536-61884555 Msa0823230:three_prime_UTR 30.0%
!! CACTATATTTGATTTGGAAC+AGG + chr5_3:61884542-61884561 Msa0823230:three_prime_UTR 30.0%
! TCCTATTGTGATTTGTACTA+GGG + chr5_3:61884848-61884867 Msa0823230:three_prime_UTR 30.0%
TTTGTTTGATCCGATTACAT+CGG + chr5_3:61884887-61884906 Msa0823230:three_prime_UTR 30.0%
!! TCTTAGTTGGTGATATGTAT+TGG + chr5_3:61884919-61884938 Msa0823230:three_prime_UTR 30.0%
CTAGTGAGTAAAGACTTAAA+GGG - chr5_3:61884951-61884970 None:intergenic 30.0%
!!! CTGGGTTATCTTTTGAAATT+TGG + chr5_3:61885122-61885141 Msa0823230:three_prime_UTR 30.0%
GGAATCTATGATAAGATGAT+CGG + chr5_3:61885308-61885327 Msa0823230:three_prime_UTR 30.0%
!!! GCTGTCGTTTATTTTTGTTT+AGG + chr5_3:61885532-61885551 Msa0823230:three_prime_UTR 30.0%
TACACTTTCGATTTCAAACA+GGG + chr5_3:61883971-61883990 Msa0823230:intron 30.0%
TCAAAAACCAATATCACACA+AGG + chr5_3:61884144-61884163 Msa0823230:three_prime_UTR 30.0%
TTGTAAATAGCATTCGCATT+CGG - chr5_3:61884202-61884221 None:intergenic 30.0%
! ATTAGTTTGATCCAAGTAGT+GGG - chr5_3:61884228-61884247 None:intergenic 30.0%
! TATTAGTTTGATCCAAGTAG+TGG - chr5_3:61884229-61884248 None:intergenic 30.0%
ATATGAAATTCCAGAGAGTT+AGG + chr5_3:61884298-61884317 Msa0823230:three_prime_UTR 30.0%
! CTGAACAAAAACCTTGATTT+TGG - chr5_3:61884370-61884389 None:intergenic 30.0%
TATGCGCACTATATTTGATT+TGG + chr5_3:61884536-61884555 Msa0823230:three_prime_UTR 30.0%
!! CACTATATTTGATTTGGAAC+AGG + chr5_3:61884542-61884561 Msa0823230:three_prime_UTR 30.0%
! TCCTATTGTGATTTGTACTA+GGG + chr5_3:61884848-61884867 Msa0823230:three_prime_UTR 30.0%
TTTGTTTGATCCGATTACAT+CGG + chr5_3:61884887-61884906 Msa0823230:three_prime_UTR 30.0%
!! TCTTAGTTGGTGATATGTAT+TGG + chr5_3:61884919-61884938 Msa0823230:three_prime_UTR 30.0%
CTAGTGAGTAAAGACTTAAA+GGG - chr5_3:61884951-61884970 None:intergenic 30.0%
!!! CTGGGTTATCTTTTGAAATT+TGG + chr5_3:61885122-61885141 Msa0823230:three_prime_UTR 30.0%
GGAATCTATGATAAGATGAT+CGG + chr5_3:61885308-61885327 Msa0823230:three_prime_UTR 30.0%
!!! GCTGTCGTTTATTTTTGTTT+AGG + chr5_3:61885532-61885551 Msa0823230:three_prime_UTR 30.0%
CTACACTTTCGATTTCAAAC+AGG + chr5_3:61883970-61883989 Msa0823230:intron 35.0%
ACACTTTCGATTTCAAACAG+GGG + chr5_3:61883972-61883991 Msa0823230:intron 35.0%
AATGTCAAGATGCATACCAT+TGG + chr5_3:61884023-61884042 Msa0823230:CDS 35.0%
! GCAAGATTTTGTTGATCCAA+TGG - chr5_3:61884042-61884061 None:intergenic 35.0%
ACATTTGACACACATGTTAG+CGG - chr5_3:61884118-61884137 None:intergenic 35.0%
GAGTAAACCTTGTGTGATAT+TGG - chr5_3:61884154-61884173 None:intergenic 35.0%
! TTAGTTTGATCCAAGTAGTG+GGG - chr5_3:61884227-61884246 None:intergenic 35.0%
!!! GCAAGAAACTGTTTTGATTG+TGG - chr5_3:61884252-61884271 None:intergenic 35.0%
!!! ATTTTGGTCTTTTTCGAGTC+GGG - chr5_3:61884354-61884373 None:intergenic 35.0%
!!! GATTTTGGTCTTTTTCGAGT+CGG - chr5_3:61884355-61884374 None:intergenic 35.0%
CTCGAAAAAGACCAAAATCA+AGG + chr5_3:61884356-61884375 Msa0823230:three_prime_UTR 35.0%
! CAAGGTTTTTGTTCAGAAAG+AGG + chr5_3:61884374-61884393 Msa0823230:three_prime_UTR 35.0%
GTTCAGAAAGAGGTTATGAA+TGG + chr5_3:61884384-61884403 Msa0823230:three_prime_UTR 35.0%
GGTTATGAATGGAACAATAG+TGG + chr5_3:61884395-61884414 Msa0823230:three_prime_UTR 35.0%
TGAATGCTAACCCTAATCAA+TGG + chr5_3:61884478-61884497 Msa0823230:three_prime_UTR 35.0%
!!! GAACAGGCTATTTTGAAACA+TGG + chr5_3:61884558-61884577 Msa0823230:three_prime_UTR 35.0%
!!! GCTATTTTGAAACATGGTGT+TGG + chr5_3:61884564-61884583 Msa0823230:three_prime_UTR 35.0%
!!! TTTTGAAACATGGTGTTGGT+AGG + chr5_3:61884568-61884587 Msa0823230:three_prime_UTR 35.0%
!!! TGTTGATTTTGTAAAGGCAC+AGG + chr5_3:61884665-61884684 Msa0823230:three_prime_UTR 35.0%
AAATTTGTCCTGTTTGTCGT+GGG + chr5_3:61884775-61884794 Msa0823230:three_prime_UTR 35.0%
! GTCCTATTGTGATTTGTACT+AGG + chr5_3:61884847-61884866 Msa0823230:three_prime_UTR 35.0%
ACCCTAGTACAAATCACAAT+AGG - chr5_3:61884852-61884871 None:intergenic 35.0%
ATCAAACAAAGCAATCGTGT+TGG - chr5_3:61884877-61884896 None:intergenic 35.0%
!! TAGTTGGTGATATGTATTGG+AGG + chr5_3:61884922-61884941 Msa0823230:three_prime_UTR 35.0%
!! AGTTGGTGATATGTATTGGA+GGG + chr5_3:61884923-61884942 Msa0823230:three_prime_UTR 35.0%
GCTAGTGAGTAAAGACTTAA+AGG - chr5_3:61884952-61884971 None:intergenic 35.0%
!! ACTGTTGATGGCAAAAAGTT+CGG + chr5_3:61885026-61885045 Msa0823230:three_prime_UTR 35.0%
!! AAATTTGGTGACCATGCTTT+TGG + chr5_3:61885137-61885156 Msa0823230:three_prime_UTR 35.0%
ACAAGTCATAACCAAAAGCA+TGG - chr5_3:61885151-61885170 None:intergenic 35.0%
!! CTTTTGGTTATGACTTGTGT+GGG + chr5_3:61885153-61885172 Msa0823230:three_prime_UTR 35.0%
!! TTTTGGTTATGACTTGTGTG+GGG + chr5_3:61885154-61885173 Msa0823230:three_prime_UTR 35.0%
! TGGTGATAGTGAGATTGAAT+TGG + chr5_3:61885184-61885203 Msa0823230:three_prime_UTR 35.0%
! TGATAGTGAGATTGAATTGG+AGG + chr5_3:61885187-61885206 Msa0823230:three_prime_UTR 35.0%
! ATTGAATTGGAGGAGTACAT+AGG + chr5_3:61885197-61885216 Msa0823230:three_prime_UTR 35.0%
GATTCCTTCTAGATCATTTG+AGG - chr5_3:61885294-61885313 None:intergenic 35.0%
! AAGATGATCGGCTTATCATT+AGG + chr5_3:61885320-61885339 Msa0823230:three_prime_UTR 35.0%
AGAGCTACCTTATGATCTAT+TGG + chr5_3:61885349-61885368 Msa0823230:three_prime_UTR 35.0%
AAGTCTTCATCTGAATGATG+AGG + chr5_3:61885391-61885410 Msa0823230:three_prime_UTR 35.0%
AGTTTCTATATCAGCTTGTC+AGG - chr5_3:61885483-61885502 None:intergenic 35.0%
CTACACTTTCGATTTCAAAC+AGG + chr5_3:61883970-61883989 Msa0823230:intron 35.0%
ACACTTTCGATTTCAAACAG+GGG + chr5_3:61883972-61883991 Msa0823230:intron 35.0%
AATGTCAAGATGCATACCAT+TGG + chr5_3:61884023-61884042 Msa0823230:CDS 35.0%
! GCAAGATTTTGTTGATCCAA+TGG - chr5_3:61884042-61884061 None:intergenic 35.0%
ACATTTGACACACATGTTAG+CGG - chr5_3:61884118-61884137 None:intergenic 35.0%
GAGTAAACCTTGTGTGATAT+TGG - chr5_3:61884154-61884173 None:intergenic 35.0%
! TTAGTTTGATCCAAGTAGTG+GGG - chr5_3:61884227-61884246 None:intergenic 35.0%
!!! GCAAGAAACTGTTTTGATTG+TGG - chr5_3:61884252-61884271 None:intergenic 35.0%
!!! ATTTTGGTCTTTTTCGAGTC+GGG - chr5_3:61884354-61884373 None:intergenic 35.0%
!!! GATTTTGGTCTTTTTCGAGT+CGG - chr5_3:61884355-61884374 None:intergenic 35.0%
CTCGAAAAAGACCAAAATCA+AGG + chr5_3:61884356-61884375 Msa0823230:three_prime_UTR 35.0%
! CAAGGTTTTTGTTCAGAAAG+AGG + chr5_3:61884374-61884393 Msa0823230:three_prime_UTR 35.0%
GTTCAGAAAGAGGTTATGAA+TGG + chr5_3:61884384-61884403 Msa0823230:three_prime_UTR 35.0%
GGTTATGAATGGAACAATAG+TGG + chr5_3:61884395-61884414 Msa0823230:three_prime_UTR 35.0%
TGAATGCTAACCCTAATCAA+TGG + chr5_3:61884478-61884497 Msa0823230:three_prime_UTR 35.0%
!!! GAACAGGCTATTTTGAAACA+TGG + chr5_3:61884558-61884577 Msa0823230:three_prime_UTR 35.0%
!!! GCTATTTTGAAACATGGTGT+TGG + chr5_3:61884564-61884583 Msa0823230:three_prime_UTR 35.0%
!!! TTTTGAAACATGGTGTTGGT+AGG + chr5_3:61884568-61884587 Msa0823230:three_prime_UTR 35.0%
!!! TGTTGATTTTGTAAAGGCAC+AGG + chr5_3:61884665-61884684 Msa0823230:three_prime_UTR 35.0%
AAATTTGTCCTGTTTGTCGT+GGG + chr5_3:61884775-61884794 Msa0823230:three_prime_UTR 35.0%
! GTCCTATTGTGATTTGTACT+AGG + chr5_3:61884847-61884866 Msa0823230:three_prime_UTR 35.0%
ACCCTAGTACAAATCACAAT+AGG - chr5_3:61884852-61884871 None:intergenic 35.0%
ATCAAACAAAGCAATCGTGT+TGG - chr5_3:61884877-61884896 None:intergenic 35.0%
!! TAGTTGGTGATATGTATTGG+AGG + chr5_3:61884922-61884941 Msa0823230:three_prime_UTR 35.0%
!! AGTTGGTGATATGTATTGGA+GGG + chr5_3:61884923-61884942 Msa0823230:three_prime_UTR 35.0%
GCTAGTGAGTAAAGACTTAA+AGG - chr5_3:61884952-61884971 None:intergenic 35.0%
!! ACTGTTGATGGCAAAAAGTT+CGG + chr5_3:61885026-61885045 Msa0823230:three_prime_UTR 35.0%
!! AAATTTGGTGACCATGCTTT+TGG + chr5_3:61885137-61885156 Msa0823230:three_prime_UTR 35.0%
ACAAGTCATAACCAAAAGCA+TGG - chr5_3:61885151-61885170 None:intergenic 35.0%
!! CTTTTGGTTATGACTTGTGT+GGG + chr5_3:61885153-61885172 Msa0823230:three_prime_UTR 35.0%
!! TTTTGGTTATGACTTGTGTG+GGG + chr5_3:61885154-61885173 Msa0823230:three_prime_UTR 35.0%
! TGGTGATAGTGAGATTGAAT+TGG + chr5_3:61885184-61885203 Msa0823230:three_prime_UTR 35.0%
! TGATAGTGAGATTGAATTGG+AGG + chr5_3:61885187-61885206 Msa0823230:three_prime_UTR 35.0%
! ATTGAATTGGAGGAGTACAT+AGG + chr5_3:61885197-61885216 Msa0823230:three_prime_UTR 35.0%
GATTCCTTCTAGATCATTTG+AGG - chr5_3:61885294-61885313 None:intergenic 35.0%
! AAGATGATCGGCTTATCATT+AGG + chr5_3:61885320-61885339 Msa0823230:three_prime_UTR 35.0%
AGAGCTACCTTATGATCTAT+TGG + chr5_3:61885349-61885368 Msa0823230:three_prime_UTR 35.0%
AAGTCTTCATCTGAATGATG+AGG + chr5_3:61885391-61885410 Msa0823230:three_prime_UTR 35.0%
AGTTTCTATATCAGCTTGTC+AGG - chr5_3:61885483-61885502 None:intergenic 35.0%
! TTGATAACCCTAACCTGTGA+AGG - chr5_3:61883867-61883886 None:intergenic 40.0%
TAGTTTGATCCAAGTAGTGG+GGG - chr5_3:61884226-61884245 None:intergenic 40.0%
CATGTACTAACCTAACTCTC+TGG - chr5_3:61884311-61884330 None:intergenic 40.0%
! CAACAGCACTCCATTGATTA+GGG - chr5_3:61884491-61884510 None:intergenic 40.0%
! ACAACAGCACTCCATTGATT+AGG - chr5_3:61884492-61884511 None:intergenic 40.0%
TTACCATCACAAATCCTCAC+AGG - chr5_3:61884693-61884712 None:intergenic 40.0%
TGTGAGGATTTGTGATGGTA+AGG + chr5_3:61884692-61884711 Msa0823230:three_prime_UTR 40.0%
GAAATTTGTCCTGTTTGTCG+TGG + chr5_3:61884774-61884793 Msa0823230:three_prime_UTR 40.0%
AATTTGTCCTGTTTGTCGTG+GGG + chr5_3:61884776-61884795 Msa0823230:three_prime_UTR 40.0%
AAACTCGAAGCAACTTTAGG+AGG - chr5_3:61884816-61884835 None:intergenic 40.0%
! TCCTAAAGTTGCTTCGAGTT+TGG + chr5_3:61884815-61884834 Msa0823230:three_prime_UTR 40.0%
! CCTAAAGTTGCTTCGAGTTT+GGG + chr5_3:61884816-61884835 Msa0823230:three_prime_UTR 40.0%
! GCTTCGAGTTTGGGAAATAT+TGG + chr5_3:61884825-61884844 Msa0823230:three_prime_UTR 40.0%
ACTCACTAGCAAAGAGTTAG+TGG + chr5_3:61884962-61884981 Msa0823230:three_prime_UTR 40.0%
ATATGTTGTGCTTGATGTCG+AGG + chr5_3:61884986-61885005 Msa0823230:three_prime_UTR 40.0%
CATTCAGAGGTTACTGTTGA+TGG + chr5_3:61885014-61885033 Msa0823230:three_prime_UTR 40.0%
TGATGGCAAAAAGTTCGGTT+TGG + chr5_3:61885031-61885050 Msa0823230:three_prime_UTR 40.0%
! GTTGCTCGTGTCAAAGATTT+TGG + chr5_3:61885065-61885084 Msa0823230:three_prime_UTR 40.0%
!! GCTTTTGGTTATGACTTGTG+TGG + chr5_3:61885152-61885171 Msa0823230:three_prime_UTR 40.0%
TCGTCCTCAAATGATCTAGA+AGG + chr5_3:61885287-61885306 Msa0823230:three_prime_UTR 40.0%
! ATGATCGGCTTATCATTAGG+TGG + chr5_3:61885323-61885342 Msa0823230:three_prime_UTR 40.0%
GCTACCTTATGATCTATTGG+AGG + chr5_3:61885352-61885371 Msa0823230:three_prime_UTR 40.0%
TGCTCCTCCAATAGATCATA+AGG - chr5_3:61885359-61885378 None:intergenic 40.0%
TCTGAATGATGAGGAATCTG+AGG + chr5_3:61885400-61885419 Msa0823230:three_prime_UTR 40.0%
! TTGATAACCCTAACCTGTGA+AGG - chr5_3:61883867-61883886 None:intergenic 40.0%
TAGTTTGATCCAAGTAGTGG+GGG - chr5_3:61884226-61884245 None:intergenic 40.0%
CATGTACTAACCTAACTCTC+TGG - chr5_3:61884311-61884330 None:intergenic 40.0%
! CAACAGCACTCCATTGATTA+GGG - chr5_3:61884491-61884510 None:intergenic 40.0%
! ACAACAGCACTCCATTGATT+AGG - chr5_3:61884492-61884511 None:intergenic 40.0%
TTACCATCACAAATCCTCAC+AGG - chr5_3:61884693-61884712 None:intergenic 40.0%
TGTGAGGATTTGTGATGGTA+AGG + chr5_3:61884692-61884711 Msa0823230:three_prime_UTR 40.0%
GAAATTTGTCCTGTTTGTCG+TGG + chr5_3:61884774-61884793 Msa0823230:three_prime_UTR 40.0%
AATTTGTCCTGTTTGTCGTG+GGG + chr5_3:61884776-61884795 Msa0823230:three_prime_UTR 40.0%
AAACTCGAAGCAACTTTAGG+AGG - chr5_3:61884816-61884835 None:intergenic 40.0%
! TCCTAAAGTTGCTTCGAGTT+TGG + chr5_3:61884815-61884834 Msa0823230:three_prime_UTR 40.0%
! CCTAAAGTTGCTTCGAGTTT+GGG + chr5_3:61884816-61884835 Msa0823230:three_prime_UTR 40.0%
! GCTTCGAGTTTGGGAAATAT+TGG + chr5_3:61884825-61884844 Msa0823230:three_prime_UTR 40.0%
ACTCACTAGCAAAGAGTTAG+TGG + chr5_3:61884962-61884981 Msa0823230:three_prime_UTR 40.0%
ATATGTTGTGCTTGATGTCG+AGG + chr5_3:61884986-61885005 Msa0823230:three_prime_UTR 40.0%
CATTCAGAGGTTACTGTTGA+TGG + chr5_3:61885014-61885033 Msa0823230:three_prime_UTR 40.0%
TGATGGCAAAAAGTTCGGTT+TGG + chr5_3:61885031-61885050 Msa0823230:three_prime_UTR 40.0%
! GTTGCTCGTGTCAAAGATTT+TGG + chr5_3:61885065-61885084 Msa0823230:three_prime_UTR 40.0%
!! GCTTTTGGTTATGACTTGTG+TGG + chr5_3:61885152-61885171 Msa0823230:three_prime_UTR 40.0%
TCGTCCTCAAATGATCTAGA+AGG + chr5_3:61885287-61885306 Msa0823230:three_prime_UTR 40.0%
! ATGATCGGCTTATCATTAGG+TGG + chr5_3:61885323-61885342 Msa0823230:three_prime_UTR 40.0%
GCTACCTTATGATCTATTGG+AGG + chr5_3:61885352-61885371 Msa0823230:three_prime_UTR 40.0%
TGCTCCTCCAATAGATCATA+AGG - chr5_3:61885359-61885378 None:intergenic 40.0%
TCTGAATGATGAGGAATCTG+AGG + chr5_3:61885400-61885419 Msa0823230:three_prime_UTR 40.0%
ATTGCAGAGGGTTTCTGATG+CGG - chr5_3:61883784-61883803 None:intergenic 45.0%
TCGTTGCGAGTTGCTTATTG+CGG - chr5_3:61883832-61883851 None:intergenic 45.0%
ATAACCCTAACCTGTGAAGG+AGG - chr5_3:61883864-61883883 None:intergenic 45.0%
! TTAGCGGTGTTTAGTTCGAG+TGG - chr5_3:61884102-61884121 None:intergenic 45.0%
ATTTACAACCCCCCACTACT+TGG + chr5_3:61884214-61884233 Msa0823230:three_prime_UTR 45.0%
! AGTTTGATCCAAGTAGTGGG+GGG - chr5_3:61884225-61884244 None:intergenic 45.0%
!!! TTTTTCGAGTCGGGTTCAGT+TGG - chr5_3:61884345-61884364 None:intergenic 45.0%
GTTCCTGTGAGGATTTGTGA+TGG + chr5_3:61884687-61884706 Msa0823230:three_prime_UTR 45.0%
! GGTAAGGAGCTTGTTTCTTG+TGG + chr5_3:61884708-61884727 Msa0823230:three_prime_UTR 45.0%
ATCAAATCCCCACGACAAAC+AGG - chr5_3:61884786-61884805 None:intergenic 45.0%
CCCAAACTCGAAGCAACTTT+AGG - chr5_3:61884819-61884838 None:intergenic 45.0%
! AAACAGCGTGCCGATGTAAT+CGG - chr5_3:61884900-61884919 None:intergenic 45.0%
!! GTTCGGTTTGGCTAATGTTG+AGG + chr5_3:61885043-61885062 Msa0823230:three_prime_UTR 45.0%
! GAATTGGAGGAGTACATAGG+AGG + chr5_3:61885200-61885219 Msa0823230:three_prime_UTR 45.0%
AGGCGAAGAGTAAGAAAGTG+AGG + chr5_3:61885420-61885439 Msa0823230:three_prime_UTR 45.0%
CGAAGAGTAAGAAAGTGAGG+AGG + chr5_3:61885423-61885442 Msa0823230:three_prime_UTR 45.0%
ATTGCAGAGGGTTTCTGATG+CGG - chr5_3:61883784-61883803 None:intergenic 45.0%
TCGTTGCGAGTTGCTTATTG+CGG - chr5_3:61883832-61883851 None:intergenic 45.0%
ATAACCCTAACCTGTGAAGG+AGG - chr5_3:61883864-61883883 None:intergenic 45.0%
! TTAGCGGTGTTTAGTTCGAG+TGG - chr5_3:61884102-61884121 None:intergenic 45.0%
ATTTACAACCCCCCACTACT+TGG + chr5_3:61884214-61884233 Msa0823230:three_prime_UTR 45.0%
! AGTTTGATCCAAGTAGTGGG+GGG - chr5_3:61884225-61884244 None:intergenic 45.0%
!!! TTTTTCGAGTCGGGTTCAGT+TGG - chr5_3:61884345-61884364 None:intergenic 45.0%
GTTCCTGTGAGGATTTGTGA+TGG + chr5_3:61884687-61884706 Msa0823230:three_prime_UTR 45.0%
! GGTAAGGAGCTTGTTTCTTG+TGG + chr5_3:61884708-61884727 Msa0823230:three_prime_UTR 45.0%
ATCAAATCCCCACGACAAAC+AGG - chr5_3:61884786-61884805 None:intergenic 45.0%
CCCAAACTCGAAGCAACTTT+AGG - chr5_3:61884819-61884838 None:intergenic 45.0%
! AAACAGCGTGCCGATGTAAT+CGG - chr5_3:61884900-61884919 None:intergenic 45.0%
!! GTTCGGTTTGGCTAATGTTG+AGG + chr5_3:61885043-61885062 Msa0823230:three_prime_UTR 45.0%
! GAATTGGAGGAGTACATAGG+AGG + chr5_3:61885200-61885219 Msa0823230:three_prime_UTR 45.0%
AGGCGAAGAGTAAGAAAGTG+AGG + chr5_3:61885420-61885439 Msa0823230:three_prime_UTR 45.0%
CGAAGAGTAAGAAAGTGAGG+AGG + chr5_3:61885423-61885442 Msa0823230:three_prime_UTR 45.0%
GCATCAGAAACCCTCTGCAA+TGG + chr5_3:61883783-61883802 Msa0823230:CDS 50.0%
AGAAACCCTCTGCAATGGAG+TGG + chr5_3:61883788-61883807 Msa0823230:CDS 50.0%
TGTTGCCACTCCATTGCAGA+GGG - chr5_3:61883796-61883815 None:intergenic 50.0%
ACCTCCTCCTTCACAGGTTA+GGG + chr5_3:61883857-61883876 Msa0823230:intron 50.0%
ACAGGGAATGGTGTGGAATG+TGG - chr5_3:61884064-61884083 None:intergenic 50.0%
ATTGGCAACAGGGAATGGTG+TGG - chr5_3:61884071-61884090 None:intergenic 50.0%
! TAAAGGCACAGGTTCCTGTG+AGG + chr5_3:61884676-61884695 Msa0823230:three_prime_UTR 50.0%
!! TCGGCACGCTGTTTCTTAGT+TGG + chr5_3:61884906-61884925 Msa0823230:three_prime_UTR 50.0%
TGTTGTGCTTGATGTCGAGG+AGG + chr5_3:61884989-61885008 Msa0823230:three_prime_UTR 50.0%
TGTCGAGGAGGTTCATTCAG+AGG + chr5_3:61885001-61885020 Msa0823230:three_prime_UTR 50.0%
GACTTGTGTGGGGTGAATAG+TGG + chr5_3:61885164-61885183 Msa0823230:three_prime_UTR 50.0%
! TTGGAGGAGTACATAGGAGG+TGG + chr5_3:61885203-61885222 Msa0823230:three_prime_UTR 50.0%
GAGAAACGCCAGAAGAAACG+CGG + chr5_3:61885254-61885273 Msa0823230:three_prime_UTR 50.0%
AGAAACGCCAGAAGAAACGC+GGG + chr5_3:61885255-61885274 Msa0823230:three_prime_UTR 50.0%
TGATCTATTGGAGGAGCAGC+TGG + chr5_3:61885361-61885380 Msa0823230:three_prime_UTR 50.0%
GATCTATTGGAGGAGCAGCT+GGG + chr5_3:61885362-61885381 Msa0823230:three_prime_UTR 50.0%
GCATCAGAAACCCTCTGCAA+TGG + chr5_3:61883783-61883802 Msa0823230:CDS 50.0%
AGAAACCCTCTGCAATGGAG+TGG + chr5_3:61883788-61883807 Msa0823230:CDS 50.0%
TGTTGCCACTCCATTGCAGA+GGG - chr5_3:61883796-61883815 None:intergenic 50.0%
ACCTCCTCCTTCACAGGTTA+GGG + chr5_3:61883857-61883876 Msa0823230:intron 50.0%
ACAGGGAATGGTGTGGAATG+TGG - chr5_3:61884064-61884083 None:intergenic 50.0%
ATTGGCAACAGGGAATGGTG+TGG - chr5_3:61884071-61884090 None:intergenic 50.0%
! TAAAGGCACAGGTTCCTGTG+AGG + chr5_3:61884676-61884695 Msa0823230:three_prime_UTR 50.0%
!! TCGGCACGCTGTTTCTTAGT+TGG + chr5_3:61884906-61884925 Msa0823230:three_prime_UTR 50.0%
TGTTGTGCTTGATGTCGAGG+AGG + chr5_3:61884989-61885008 Msa0823230:three_prime_UTR 50.0%
TGTCGAGGAGGTTCATTCAG+AGG + chr5_3:61885001-61885020 Msa0823230:three_prime_UTR 50.0%
GACTTGTGTGGGGTGAATAG+TGG + chr5_3:61885164-61885183 Msa0823230:three_prime_UTR 50.0%
! TTGGAGGAGTACATAGGAGG+TGG + chr5_3:61885203-61885222 Msa0823230:three_prime_UTR 50.0%
GAGAAACGCCAGAAGAAACG+CGG + chr5_3:61885254-61885273 Msa0823230:three_prime_UTR 50.0%
AGAAACGCCAGAAGAAACGC+GGG + chr5_3:61885255-61885274 Msa0823230:three_prime_UTR 50.0%
TGATCTATTGGAGGAGCAGC+TGG + chr5_3:61885361-61885380 Msa0823230:three_prime_UTR 50.0%
GATCTATTGGAGGAGCAGCT+GGG + chr5_3:61885362-61885381 Msa0823230:three_prime_UTR 50.0%
GTGTTGCCACTCCATTGCAG+AGG - chr5_3:61883797-61883816 None:intergenic 55.0%
GGAGTGGCAACACCACCTTA+CGG + chr5_3:61883804-61883823 Msa0823230:CDS 55.0%
TTGCTTATTGCGGCGCCGTA+AGG - chr5_3:61883822-61883841 None:intergenic 55.0%
ACAACCACCTCCTCCTTCAC+AGG + chr5_3:61883851-61883870 Msa0823230:CDS 55.0%
CTAACCTGTGAAGGAGGAGG+TGG - chr5_3:61883858-61883877 None:intergenic 55.0%
CACCTCCTCCTTCACAGGTT+AGG + chr5_3:61883856-61883875 Msa0823230:intron 55.0%
ACCCTAACCTGTGAAGGAGG+AGG - chr5_3:61883861-61883880 None:intergenic 55.0%
CGAGTCGGGTTCAGTTGGAA+GGG - chr5_3:61884340-61884359 None:intergenic 55.0%
TCGAGTCGGGTTCAGTTGGA+AGG - chr5_3:61884341-61884360 None:intergenic 55.0%
GTGTTGCCACTCCATTGCAG+AGG - chr5_3:61883797-61883816 None:intergenic 55.0%
GGAGTGGCAACACCACCTTA+CGG + chr5_3:61883804-61883823 Msa0823230:CDS 55.0%
TTGCTTATTGCGGCGCCGTA+AGG - chr5_3:61883822-61883841 None:intergenic 55.0%
ACAACCACCTCCTCCTTCAC+AGG + chr5_3:61883851-61883870 Msa0823230:CDS 55.0%
CTAACCTGTGAAGGAGGAGG+TGG - chr5_3:61883858-61883877 None:intergenic 55.0%
CACCTCCTCCTTCACAGGTT+AGG + chr5_3:61883856-61883875 Msa0823230:intron 55.0%
ACCCTAACCTGTGAAGGAGG+AGG - chr5_3:61883861-61883880 None:intergenic 55.0%
CGAGTCGGGTTCAGTTGGAA+GGG - chr5_3:61884340-61884359 None:intergenic 55.0%
TCGAGTCGGGTTCAGTTGGA+AGG - chr5_3:61884341-61884360 None:intergenic 55.0%
CTTATTGCGGCGCCGTAAGG+TGG - chr5_3:61883819-61883838 None:intergenic 60.0%
! CGCGCATTGGCAACAGGGAA+TGG - chr5_3:61884076-61884095 None:intergenic 60.0%
! GGAGACGCGCATTGGCAACA+GGG - chr5_3:61884081-61884100 None:intergenic 60.0%
! TGGAGACGCGCATTGGCAAC+AGG - chr5_3:61884082-61884101 None:intergenic 60.0%
GTTCGAGTGGAGACGCGCAT+TGG - chr5_3:61884089-61884108 None:intergenic 60.0%
GACGCTTCCCGCGTTTCTTC+TGG - chr5_3:61885265-61885284 None:intergenic 60.0%
CTATTGGAGGAGCAGCTGGG+TGG + chr5_3:61885365-61885384 Msa0823230:three_prime_UTR 60.0%
CTTATTGCGGCGCCGTAAGG+TGG - chr5_3:61883819-61883838 None:intergenic 60.0%
! CGCGCATTGGCAACAGGGAA+TGG - chr5_3:61884076-61884095 None:intergenic 60.0%
! GGAGACGCGCATTGGCAACA+GGG - chr5_3:61884081-61884100 None:intergenic 60.0%
! TGGAGACGCGCATTGGCAAC+AGG - chr5_3:61884082-61884101 None:intergenic 60.0%
GTTCGAGTGGAGACGCGCAT+TGG - chr5_3:61884089-61884108 None:intergenic 60.0%
GACGCTTCCCGCGTTTCTTC+TGG - chr5_3:61885265-61885284 None:intergenic 60.0%
CTATTGGAGGAGCAGCTGGG+TGG + chr5_3:61885365-61885384 Msa0823230:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 61883670 61885559 61883670 ID=Msa0823230;Name=Msa0823230
chr5_3 mRNA 61883670 61885559 61883670 ID=Msa0823230-mRNA-1;Parent=Msa0823230;Name=Msa0823230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=101|1|1|1|1|1|2|1448|73
chr5_3 exon 61883670 61883872 61883670 ID=Msa0823230-mRNA-1:exon:19101;Parent=Msa0823230-mRNA-1
chr5_3 exon 61883992 61885559 61883992 ID=Msa0823230-mRNA-1:exon:19102;Parent=Msa0823230-mRNA-1
chr5_3 five_prime_UTR 61883670 61883770 61883670 ID=Msa0823230-mRNA-1:five_prime_utr;Parent=Msa0823230-mRNA-1
chr5_3 CDS 61883771 61883872 61883771 ID=Msa0823230-mRNA-1:cds;Parent=Msa0823230-mRNA-1
chr5_3 CDS 61883992 61884111 61883992 ID=Msa0823230-mRNA-1:cds;Parent=Msa0823230-mRNA-1
chr5_3 three_prime_UTR 61884112 61885559 61884112 ID=Msa0823230-mRNA-1:three_prime_utr;Parent=Msa0823230-mRNA-1
Gene Sequence

>Msa0823230

ATGCACAAAGCCGCATCAGAAACCCTCTGCAATGGAGTGGCAACACCACCTTACGGCGCCGCAATAAGCAACTCGCAACGACAACCACCTCCTCCTTCACAGGGGAACACACTTTTTTCTTTCGATCATCGAAAATGTCAAGATGCATACCATTGGATCAACAAAATCTTGCCACATTCCACACCATTCCCTGTTGCCAATGCGCGTCTCCACTCGAACTAA
Protein sequence

>Msa0823230

MHKAASETLCNGVATPPYGAAISNSQRQPPPPSQGNTLFSFDHRKCQDAYHWINKILPHSTPFPVANARLHSN*