Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824170 | XP_003617645.1 | 95.775 | 497 | 11 | 2 | 1 | 497 | 1 | 487 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824170 | sp|Q9SZ15|LIP5_ARATH | 55.410 | 305 | 109 | 7 | 4 | 303 | 5 | 287 | 4.71e-87 | 276 |
| Msa0824170 | sp|Q9SZ15|LIP5_ARATH | 55.114 | 176 | 65 | 7 | 334 | 496 | 244 | 418 | 4.54e-32 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824170 | G7K8Q1 | 95.775 | 497 | 11 | 2 | 1 | 497 | 1 | 487 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0655860 | Msa0824170 | 0.800842 | 1.191994e-48 | -8.615850e-47 |
| Msa0824160 | Msa0824170 | 0.818718 | 1.693544e-52 | -8.615850e-47 |
| Msa0824170 | Msa1147790 | 0.813678 | 2.266719e-51 | -8.615850e-47 |
| Msa0824170 | Msa1196960 | 0.816513 | 5.320479e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824170 | MtrunA17_Chr5g0444891 | 95.775 | 497 | 11 | 2 | 1 | 497 | 1 | 487 | 0.0 | 942 |
| Msa0824170 | MtrunA17_Chr1g0172721 | 51.613 | 93 | 37 | 3 | 256 | 348 | 4 | 88 | 1.33e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824170 | AT4G26750.1 | 55.410 | 305 | 109 | 7 | 4 | 303 | 5 | 287 | 4.78e-88 | 276 |
| Msa0824170 | AT4G26750.1 | 55.114 | 176 | 65 | 7 | 334 | 496 | 244 | 418 | 4.61e-33 | 130 |
Find 169 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGCCTCTGCTATTCTTTC+AGG | 0.134746 | 5_3:-63302155 | None:intergenic |
| TTCTGCTGCTGGAAATGTTT+TGG | 0.196850 | 5_3:-63302064 | None:intergenic |
| TTTGAGATTCTTAATCAATT+TGG | 0.204458 | 5_3:+63300887 | Msa0824170:CDS |
| AACTTGGATAAGATTGAAAA+TGG | 0.218480 | 5_3:-63301929 | None:intergenic |
| TTAAGAGTATCGTTGAATTT+AGG | 0.233125 | 5_3:-63301426 | None:intergenic |
| TTATCGTTTATAGGATAAAA+AGG | 0.235684 | 5_3:+63300380 | Msa0824170:intron |
| TGTTTATTCCTGCAGGATAT+TGG | 0.237590 | 5_3:+63301300 | Msa0824170:intron |
| GAGTTGTTGGCTTGGGTTCC+GGG | 0.246329 | 5_3:-63302097 | None:intergenic |
| GGAGTTGTTGGCTTGGGTTC+CGG | 0.263293 | 5_3:-63302098 | None:intergenic |
| TGATAGTAAGTGTGGTTTAC+TGG | 0.269896 | 5_3:-63301978 | None:intergenic |
| AAGAAGAGCATTAGTAGTTT+TGG | 0.272612 | 5_3:-63299507 | None:intergenic |
| AGTTTCGTGAGAAGGGTAAT+TGG | 0.281419 | 5_3:-63301886 | None:intergenic |
| GTGGAGGAGGATGGTATTCT+TGG | 0.285105 | 5_3:-63301623 | None:intergenic |
| GTGGAGGAGGATGGTATTCT+TGG | 0.285105 | 5_3:-63301650 | None:intergenic |
| CATCTTTGCAGTTTCATGAT+AGG | 0.285900 | 5_3:+63301475 | Msa0824170:CDS |
| GAAACTTCTGCTTCTGGTGC+TGG | 0.302418 | 5_3:+63301330 | Msa0824170:CDS |
| GTTTATTCCTGCAGGATATT+GGG | 0.307438 | 5_3:+63301301 | Msa0824170:intron |
| TGAGTATTGTTGGTGGTTGT+AGG | 0.317823 | 5_3:-63301838 | None:intergenic |
| GGATTTGCTTTGAATGTGTT+TGG | 0.322140 | 5_3:+63300441 | Msa0824170:CDS |
| CCAGATCAGTCACAGAATTT+AGG | 0.331190 | 5_3:+63301861 | Msa0824170:CDS |
| GTGGAGGAGGATGGTAATCC+TGG | 0.345422 | 5_3:-63301704 | None:intergenic |
| GAGGAACGCTTGGCAGATTC+TGG | 0.347196 | 5_3:-63301398 | None:intergenic |
| TACTGATATGTCGGAGTTGT+TGG | 0.364965 | 5_3:-63302110 | None:intergenic |
| CAATCTTACTGGCCAATTGA+TGG | 0.371505 | 5_3:-63302272 | None:intergenic |
| ACTTGGATAAGATTGAAAAT+GGG | 0.376597 | 5_3:-63301928 | None:intergenic |
| GTGGCGGAGGATGGTAATCT+TGG | 0.380172 | 5_3:-63301677 | None:intergenic |
| GTGGAGGCTGATGGTAATCT+TGG | 0.380493 | 5_3:-63301758 | None:intergenic |
| GTGGAGGCTGATGGTAATCT+TGG | 0.380493 | 5_3:-63301785 | None:intergenic |
| TAAGAACTGTCTGATCTTGC+AGG | 0.381758 | 5_3:-63301807 | None:intergenic |
| TGAAAATGGGGAAGAGAGTA+AGG | 0.385158 | 5_3:-63301915 | None:intergenic |
| AAGATTTGCTGTTGGGGCAC+TGG | 0.399437 | 5_3:+63302187 | Msa0824170:CDS |
| GTAATCTTGGGAAGGTGGAG+GGG | 0.399835 | 5_3:-63301745 | None:intergenic |
| GGCAGATTCTGGTAGTTGAC+AGG | 0.400705 | 5_3:-63301387 | None:intergenic |
| ATGGAGGAGGATGGTAGTCT+TGG | 0.402313 | 5_3:-63301569 | None:intergenic |
| CCTGTGGCTGGCCCACCTGC+TGG | 0.403221 | 5_3:+63301144 | Msa0824170:CDS |
| AACATTTCCAGCAGCAGAAA+TGG | 0.410422 | 5_3:+63302068 | Msa0824170:CDS |
| ACTACTGAAACTTCTGCTTC+TGG | 0.414352 | 5_3:+63301324 | Msa0824170:CDS |
| AAGCTGCAAGATTTGCTGTT+GGG | 0.416451 | 5_3:+63302180 | Msa0824170:CDS |
| GAAGATAATTTATATCTTGA+GGG | 0.424873 | 5_3:+63300420 | Msa0824170:CDS |
| TAATCTTGGGAAGGTGGAGG+GGG | 0.424946 | 5_3:-63301744 | None:intergenic |
| CTATTCTTTCAGGTGGTGGC+TGG | 0.426122 | 5_3:-63302145 | None:intergenic |
| ATCTTTGCAGTTTCATGATA+GGG | 0.431940 | 5_3:+63301476 | Msa0824170:CDS |
| ACTGATCTGGTGAGTATTGT+TGG | 0.436207 | 5_3:-63301848 | None:intergenic |
| GATTTGCTTTGAATGTGTTT+GGG | 0.440793 | 5_3:+63300442 | Msa0824170:CDS |
| TCATCGGCGCGTTGAAGGTA+TGG | 0.441195 | 5_3:-63299296 | None:intergenic |
| TCTCATGAAACAGCTTGAAA+AGG | 0.442260 | 5_3:+63299535 | Msa0824170:CDS |
| TGGTAATCTTGGGAAGGTGG+AGG | 0.443776 | 5_3:-63301747 | None:intergenic |
| AATCATACATATATATTACT+AGG | 0.444945 | 5_3:-63301198 | None:intergenic |
| CCATCCTCCGCCACCTTCCC+AGG | 0.445524 | 5_3:+63301686 | Msa0824170:CDS |
| ATGATAACTATGTGTTGAAT+CGG | 0.452063 | 5_3:-63301361 | None:intergenic |
| GGATGGTATTCTTGGGAAGT+AGG | 0.460720 | 5_3:-63301615 | None:intergenic |
| CTTGAGAAGGTGGAGGAGGA+TGG | 0.462748 | 5_3:-63301713 | None:intergenic |
| TCAAGATATAAATTATCTTC+AGG | 0.464007 | 5_3:-63300417 | None:intergenic |
| AGAAACAGAAATATGCAGTA+TGG | 0.466421 | 5_3:+63301079 | Msa0824170:CDS |
| GACAGTACCATTTCTGCTGC+TGG | 0.466540 | 5_3:-63302075 | None:intergenic |
| GTAAACCACACTTACTATCA+AGG | 0.467605 | 5_3:+63301981 | Msa0824170:CDS |
| CGCGGGTTCGTTCTCCGCCA+TGG | 0.468839 | 5_3:-63299261 | None:intergenic |
| CTTGGGAAGGTGGAGGAGGA+TGG | 0.470573 | 5_3:-63301632 | None:intergenic |
| CTTGGGAAGGTGGAGGAGGA+TGG | 0.470573 | 5_3:-63301659 | None:intergenic |
| GTTTCGTGAGAAGGGTAATT+GGG | 0.471358 | 5_3:-63301885 | None:intergenic |
| TTGCTAACAAACCCATCAAT+TGG | 0.476202 | 5_3:+63302260 | Msa0824170:CDS |
| CTATCATGAAACTGCAAAGA+TGG | 0.476651 | 5_3:-63301474 | None:intergenic |
| GTAATTCATCGGCGCGTTGA+AGG | 0.477074 | 5_3:-63299301 | None:intergenic |
| CCTAAATTCTGTGACTGATC+TGG | 0.477769 | 5_3:-63301861 | None:intergenic |
| AATCTTACTGGCCAATTGAT+GGG | 0.479049 | 5_3:-63302271 | None:intergenic |
| GGTAATCTTGGGAAGGTGGA+GGG | 0.479769 | 5_3:-63301746 | None:intergenic |
| TTGTAGTCAGAGGAGCTGAC+TGG | 0.480299 | 5_3:-63302025 | None:intergenic |
| GGATGGTATTCTTGGGAAGG+TGG | 0.483390 | 5_3:-63301642 | None:intergenic |
| GAGTATTGTTGGTGGTTGTA+GGG | 0.484794 | 5_3:-63301837 | None:intergenic |
| TGGAGGAGGATGGTAGTCTT+GGG | 0.486188 | 5_3:-63301568 | None:intergenic |
| TAATCTTGGGAAGGTGGAGG+AGG | 0.487363 | 5_3:-63301663 | None:intergenic |
| CGATTATATGCGATGGAAAG+AGG | 0.487636 | 5_3:+63299458 | Msa0824170:CDS |
| AGGCTGCTTTCTGTAAAACT+TGG | 0.488429 | 5_3:-63301945 | None:intergenic |
| TATGTCGGAGTTGTTGGCTT+GGG | 0.489287 | 5_3:-63302104 | None:intergenic |
| TGAAGATAATTTATATCTTG+AGG | 0.489442 | 5_3:+63300419 | Msa0824170:CDS |
| TATTCTTGGGAAGGTGGAGG+AGG | 0.490689 | 5_3:-63301636 | None:intergenic |
| TAATCTTGAGAAGGTGGAGG+AGG | 0.493863 | 5_3:-63301717 | None:intergenic |
| GGTATTCTTGGGAAGTAGGT+GGG | 0.494186 | 5_3:-63301611 | None:intergenic |
| TCTGCTATTCTTTCAGGTGG+TGG | 0.495830 | 5_3:-63302149 | None:intergenic |
| ATACGAAAGGCTTTGAAAGA+AGG | 0.495962 | 5_3:+63301114 | Msa0824170:CDS |
| TGATGATAATCCTGGGAAGA+TGG | 0.496116 | 5_3:-63301588 | None:intergenic |
| TGGGAAGAATATGAAGCATC+GGG | 0.496800 | 5_3:-63302005 | None:intergenic |
| AAACTTCTGCTTCTGGTGCT+GGG | 0.497466 | 5_3:+63301331 | Msa0824170:CDS |
| TAGGTGGGTGATGATAATCC+TGG | 0.498458 | 5_3:-63301596 | None:intergenic |
| CCTGGGAAGGTGGCGGAGGA+TGG | 0.500518 | 5_3:-63301686 | None:intergenic |
| CCAGCAGGTGGGCCAGCCAC+AGG | 0.500659 | 5_3:-63301144 | None:intergenic |
| TGGGGAAGAGAGTAAGGAGC+GGG | 0.501714 | 5_3:-63301909 | None:intergenic |
| TCTCCGCCATGGAAAATTCT+CGG | 0.508445 | 5_3:-63299250 | None:intergenic |
| TATGGTAACAAAGGCTTCGC+GGG | 0.510300 | 5_3:-63299278 | None:intergenic |
| TTAGGTGCAGGAGGAACGCT+TGG | 0.510436 | 5_3:-63301408 | None:intergenic |
| TGGAGGAGGATGGTATTCTT+GGG | 0.510443 | 5_3:-63301622 | None:intergenic |
| TGGAGGAGGATGGTATTCTT+GGG | 0.510443 | 5_3:-63301649 | None:intergenic |
| TGGAGGCTGATGGTAATCTT+GGG | 0.515458 | 5_3:-63301757 | None:intergenic |
| TGGAGGCTGATGGTAATCTT+GGG | 0.515458 | 5_3:-63301784 | None:intergenic |
| TTCGTGTTTCTGTAATTCAT+CGG | 0.516755 | 5_3:-63299312 | None:intergenic |
| TGGTATTCTTGGGAAGTAGG+TGG | 0.517149 | 5_3:-63301612 | None:intergenic |
| AGCTTATTTCTTCTAGTCGA+AGG | 0.520231 | 5_3:+63299184 | None:intergenic |
| GAAGGAAGGAAGCCTGTGGC+TGG | 0.522191 | 5_3:+63301132 | Msa0824170:CDS |
| AAAGCTGCAAGATTTGCTGT+TGG | 0.523329 | 5_3:+63302179 | Msa0824170:CDS |
| GACAGGTCCTCGTCACCAGC+AGG | 0.523402 | 5_3:-63301159 | None:intergenic |
| CTTGGATAAGATTGAAAATG+GGG | 0.523875 | 5_3:-63301927 | None:intergenic |
| GAGAGCTCGACAGAGCGGAC+AGG | 0.525622 | 5_3:-63301176 | None:intergenic |
| CTGTCTGATCTTGCAGGTGG+AGG | 0.526101 | 5_3:-63301801 | None:intergenic |
| AGGTCCTCGTCACCAGCAGG+TGG | 0.527025 | 5_3:-63301156 | None:intergenic |
| ATGCGATGGAAAGAGGATTG+AGG | 0.529928 | 5_3:+63299465 | Msa0824170:CDS |
| TGGTAATCCTGGGAAGGTGG+CGG | 0.530509 | 5_3:-63301693 | None:intergenic |
| TAATCCTGGGAAGGTGGCGG+AGG | 0.531006 | 5_3:-63301690 | None:intergenic |
| TGGTATTCTTGGGAAGGTGG+AGG | 0.531288 | 5_3:-63301639 | None:intergenic |
| TGGTAATCTTGGGAAGGTGG+AGG | 0.531288 | 5_3:-63301666 | None:intergenic |
| ATATGTCGGAGTTGTTGGCT+TGG | 0.532633 | 5_3:-63302105 | None:intergenic |
| CTGGGAAGAATATGAAGCAT+CGG | 0.540013 | 5_3:-63302006 | None:intergenic |
| TGGCGGAGGATGGTAATCTT+GGG | 0.543736 | 5_3:-63301676 | None:intergenic |
| GCAGACAAGCAAGATCGTGC+TGG | 0.548143 | 5_3:+63300468 | Msa0824170:CDS |
| CCATCCTCCTCCATCTTCCC+AGG | 0.549730 | 5_3:+63301578 | Msa0824170:CDS |
| TGTAGTCAGAGGAGCTGACT+GGG | 0.551319 | 5_3:-63302024 | None:intergenic |
| GTATCGTTGAATTTAGGTGC+AGG | 0.551418 | 5_3:-63301420 | None:intergenic |
| CTTGGGAAGGTGGAGGCTGA+TGG | 0.552617 | 5_3:-63301767 | None:intergenic |
| AATGAATGGTTTGTAGTCAG+AGG | 0.554312 | 5_3:-63302035 | None:intergenic |
| GTATGGTAACAAAGGCTTCG+CGG | 0.555681 | 5_3:-63299279 | None:intergenic |
| GCCTCTGCTATTCTTTCAGG+TGG | 0.559760 | 5_3:-63302152 | None:intergenic |
| GGATGGTAATCTTGGGAAGG+TGG | 0.559838 | 5_3:-63301669 | None:intergenic |
| AGCTGCAAGATTTGCTGTTG+GGG | 0.561218 | 5_3:+63302181 | Msa0824170:CDS |
| CAGCAGAAATGGTACTGTCC+CGG | 0.561919 | 5_3:+63302079 | Msa0824170:CDS |
| TGGCCCACCTGCTGGTGACG+AGG | 0.563390 | 5_3:+63301152 | Msa0824170:CDS |
| GGAGCGGGAGTTTCGTGAGA+AGG | 0.566359 | 5_3:-63301894 | None:intergenic |
| TTTAGGTCGATTATATGCGA+TGG | 0.567522 | 5_3:+63299451 | Msa0824170:intron |
| GGAGGATGGTATTCTTGGGA+AGG | 0.584118 | 5_3:-63301645 | None:intergenic |
| GGTTGATAATCTTGAGAAGG+TGG | 0.586451 | 5_3:-63301723 | None:intergenic |
| CTACTGTCATACTGATATGT+CGG | 0.586527 | 5_3:-63302119 | None:intergenic |
| TCTTGGGAAGGATAAACGCC+AGG | 0.587567 | 5_3:-63301552 | None:intergenic |
| GGATGGTAATCCTGGGAAGG+TGG | 0.588593 | 5_3:-63301696 | None:intergenic |
| TCATGAAACTGCAAAGATGG+TGG | 0.589439 | 5_3:-63301471 | None:intergenic |
| TGATGGTAATCTTGGGAAGG+TGG | 0.591057 | 5_3:-63301750 | None:intergenic |
| TGATGGTAATCTTGGGAAGG+TGG | 0.591057 | 5_3:-63301777 | None:intergenic |
| CGGGCCCTTGATAGTAAGTG+TGG | 0.593286 | 5_3:-63301986 | None:intergenic |
| GGTGTATATGAGTGAGATGA+TGG | 0.594338 | 5_3:-63301531 | None:intergenic |
| GATCTGGTGAGTATTGTTGG+TGG | 0.597064 | 5_3:-63301845 | None:intergenic |
| TGGTAATCTTGGGAAGGTGG+AGG | 0.601658 | 5_3:-63301774 | None:intergenic |
| GCAGATTCTGGTAGTTGACA+GGG | 0.602072 | 5_3:-63301386 | None:intergenic |
| GGAGGATGGTAGTCTTGGGA+AGG | 0.602964 | 5_3:-63301564 | None:intergenic |
| ATGGGGAAGAGAGTAAGGAG+CGG | 0.605913 | 5_3:-63301910 | None:intergenic |
| TAAACCACACTTACTATCAA+GGG | 0.607249 | 5_3:+63301982 | Msa0824170:CDS |
| TGATAATCTTGAGAAGGTGG+AGG | 0.608409 | 5_3:-63301720 | None:intergenic |
| CCTGGGAAGATGGAGGAGGA+TGG | 0.609866 | 5_3:-63301578 | None:intergenic |
| AGGTGGGTGATGATAATCCT+GGG | 0.611980 | 5_3:-63301595 | None:intergenic |
| GGCTGATGGTAATCTTGGGA+AGG | 0.611982 | 5_3:-63301753 | None:intergenic |
| GGCTGATGGTAATCTTGGGA+AGG | 0.611982 | 5_3:-63301780 | None:intergenic |
| ATCTTGCAGGTGGAGGCTGA+TGG | 0.612435 | 5_3:-63301794 | None:intergenic |
| GAAAGGCTTTGAAAGAAGGA+AGG | 0.614080 | 5_3:+63301118 | Msa0824170:CDS |
| CGTTGAAGGTATGGTAACAA+AGG | 0.615442 | 5_3:-63299287 | None:intergenic |
| TGGAGGAGGATGGTAATCCT+GGG | 0.619455 | 5_3:-63301703 | None:intergenic |
| GTGAGATGATGGCGAAACAA+TGG | 0.623344 | 5_3:-63301520 | None:intergenic |
| TCATCTCACTCATATACACC+TGG | 0.623498 | 5_3:+63301534 | Msa0824170:CDS |
| TAATCCTGGGAAGATGGAGG+AGG | 0.623898 | 5_3:-63301582 | None:intergenic |
| GAGCGGGAGTTTCGTGAGAA+GGG | 0.624363 | 5_3:-63301893 | None:intergenic |
| GGTTTACTGGTACCGACGGT+AGG | 0.625435 | 5_3:-63301965 | None:intergenic |
| GAAAGCAGCTGATATACGAA+AGG | 0.625932 | 5_3:+63301101 | Msa0824170:CDS |
| TACAGAAAGCAGCCTACCGT+CGG | 0.625941 | 5_3:+63301953 | Msa0824170:CDS |
| GGAGGATGGTAATCCTGGGA+AGG | 0.640989 | 5_3:-63301699 | None:intergenic |
| GTGTGGTTTACTGGTACCGA+CGG | 0.641933 | 5_3:-63301969 | None:intergenic |
| TCGTTGAATTTAGGTGCAGG+AGG | 0.647739 | 5_3:-63301417 | None:intergenic |
| GAACTGTCTGATCTTGCAGG+TGG | 0.649066 | 5_3:-63301804 | None:intergenic |
| TGATAATCCTGGGAAGATGG+AGG | 0.661390 | 5_3:-63301585 | None:intergenic |
| GGTCCTCGTCACCAGCAGGT+GGG | 0.661611 | 5_3:-63301155 | None:intergenic |
| GGAGGATGGTAATCTTGGGA+AGG | 0.668348 | 5_3:-63301672 | None:intergenic |
| ACCACCTGAAAGAATAGCAG+AGG | 0.670430 | 5_3:+63302151 | Msa0824170:CDS |
| GAAAGAAGGAAGGAAGCCTG+TGG | 0.681972 | 5_3:+63301128 | Msa0824170:CDS |
| TTACAGTAATAAGCAACGAG+AGG | 0.703762 | 5_3:-63299335 | None:intergenic |
| ACTAGGAGAGCTCGACAGAG+CGG | 0.717441 | 5_3:-63301181 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATAATTATTATCATT+AGG | - | chr5_3:63299414-63299433 | None:intergenic | 10.0% |
| !!! | TTATAGCTTTTGAAATATTA+CGG | + | chr5_3:63299785-63299804 | Msa0824170:intron | 15.0% |
| !! | TTAAAAATACAATTACACAA+AGG | - | chr5_3:63301030-63301049 | None:intergenic | 15.0% |
| !! | AATCATACATATATATTACT+AGG | - | chr5_3:63301201-63301220 | None:intergenic | 15.0% |
| !!! | TCATTTTTTTGTGTGTATTT+AGG | + | chr5_3:63299434-63299453 | Msa0824170:intron | 20.0% |
| !!! | TATTGCTATATTAGAACTTT+TGG | + | chr5_3:63300123-63300142 | Msa0824170:intron | 20.0% |
| !! | ATCTTTGTATTATCGTTTAT+AGG | + | chr5_3:63300371-63300390 | Msa0824170:intron | 20.0% |
| !! | TTATCGTTTATAGGATAAAA+AGG | + | chr5_3:63300380-63300399 | Msa0824170:intron | 20.0% |
| !! | TATCGTTTATAGGATAAAAA+GGG | + | chr5_3:63300381-63300400 | Msa0824170:intron | 20.0% |
| !! | TCAAGATATAAATTATCTTC+AGG | - | chr5_3:63300420-63300439 | None:intergenic | 20.0% |
| !! | TGAAGATAATTTATATCTTG+AGG | + | chr5_3:63300419-63300438 | Msa0824170:CDS | 20.0% |
| !! | GAAGATAATTTATATCTTGA+GGG | + | chr5_3:63300420-63300439 | Msa0824170:CDS | 20.0% |
| !!! | TTTGAGATTCTTAATCAATT+TGG | + | chr5_3:63300887-63300906 | Msa0824170:CDS | 20.0% |
| !!! | CAAATGACTCATTTTAAGTT+AGG | + | chr5_3:63300154-63300173 | Msa0824170:intron | 25.0% |
| !!! | ATTTTAAGTTAGGTGAATCT+GGG | + | chr5_3:63300164-63300183 | Msa0824170:intron | 25.0% |
| ! | CAAGAGATAAAGAAAAAAAC+AGG | - | chr5_3:63300263-63300282 | None:intergenic | 25.0% |
| ! | CTATTTAACAACACAGTTAT+AGG | - | chr5_3:63300581-63300600 | None:intergenic | 25.0% |
| ! | TTGTTAAATAGTAGCTATAG+CGG | + | chr5_3:63300590-63300609 | Msa0824170:intron | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | chr5_3:63300678-63300697 | Msa0824170:intron | 25.0% |
| ! | TATTTATATGCACTGCATAA+CGG | - | chr5_3:63301240-63301259 | None:intergenic | 25.0% |
| ! | ATGATAACTATGTGTTGAAT+CGG | - | chr5_3:63301364-63301383 | None:intergenic | 25.0% |
| !!! | TTAAGAGTATCGTTGAATTT+AGG | - | chr5_3:63301429-63301448 | None:intergenic | 25.0% |
| ! | ACTTGGATAAGATTGAAAAT+GGG | - | chr5_3:63301931-63301950 | None:intergenic | 25.0% |
| ! | AACTTGGATAAGATTGAAAA+TGG | - | chr5_3:63301932-63301951 | None:intergenic | 25.0% |
| !!! | TGTTTTGGGTATTTAATGAA+TGG | - | chr5_3:63302052-63302071 | None:intergenic | 25.0% |
| ! | TTCGTGTTTCTGTAATTCAT+CGG | - | chr5_3:63299315-63299334 | None:intergenic | 30.0% |
| !!! | AAGAAGAGCATTAGTAGTTT+TGG | - | chr5_3:63299510-63299529 | None:intergenic | 30.0% |
| !!! | TAGCTTTTGAAATATTACGG+TGG | + | chr5_3:63299788-63299807 | Msa0824170:intron | 30.0% |
| ! | ACATGAATGTGTGATTTTCT+TGG | - | chr5_3:63300094-63300113 | None:intergenic | 30.0% |
| !!! | CATTTTAAGTTAGGTGAATC+TGG | + | chr5_3:63300163-63300182 | Msa0824170:intron | 30.0% |
| TCTCTTGAAAACAATTTCAG+TGG | + | chr5_3:63300276-63300295 | Msa0824170:intron | 30.0% | |
| ! | GATTTGCTTTGAATGTGTTT+GGG | + | chr5_3:63300442-63300461 | Msa0824170:CDS | 30.0% |
| ACAAAATGTTGTCAAATAGC+GGG | + | chr5_3:63300679-63300698 | Msa0824170:intron | 30.0% | |
| CTTCTATCACATAACATTCT+TGG | + | chr5_3:63300768-63300787 | Msa0824170:intron | 30.0% | |
| !! | ATATATTTCTGACCTTTTGC+AGG | + | chr5_3:63300828-63300847 | Msa0824170:intron | 30.0% |
| !!! | TTTTGAGTTTATTTTCCAGC+TGG | + | chr5_3:63301053-63301072 | Msa0824170:intron | 30.0% |
| AGAAACAGAAATATGCAGTA+TGG | + | chr5_3:63301079-63301098 | Msa0824170:CDS | 30.0% | |
| GTATGATTCAAAACTCAACT+CGG | + | chr5_3:63301213-63301232 | Msa0824170:intron | 30.0% | |
| ATCTTTGCAGTTTCATGATA+GGG | + | chr5_3:63301476-63301495 | Msa0824170:CDS | 30.0% | |
| CTTGGATAAGATTGAAAATG+GGG | - | chr5_3:63301930-63301949 | None:intergenic | 30.0% | |
| TAAACCACACTTACTATCAA+GGG | + | chr5_3:63301982-63302001 | Msa0824170:CDS | 30.0% | |
| ! | TTATCTCCGAGAATTTTCCA+TGG | + | chr5_3:63299244-63299263 | Msa0824170:exon | 35.0% |
| TTACAGTAATAAGCAACGAG+AGG | - | chr5_3:63299338-63299357 | None:intergenic | 35.0% | |
| TTTAGGTCGATTATATGCGA+TGG | + | chr5_3:63299451-63299470 | Msa0824170:intron | 35.0% | |
| TCTCATGAAACAGCTTGAAA+AGG | + | chr5_3:63299535-63299554 | Msa0824170:CDS | 35.0% | |
| CATTCATGCACAACAAGTTT+GGG | - | chr5_3:63299684-63299703 | None:intergenic | 35.0% | |
| !!! | CAGCACAATATTTTGATAGC+CGG | - | chr5_3:63299866-63299885 | None:intergenic | 35.0% |
| AAGTCAAAGATGGTGATCTT+CGG | + | chr5_3:63299896-63299915 | Msa0824170:intron | 35.0% | |
| ! | GCATTGACAAATCAATAGCA+TGG | + | chr5_3:63300000-63300019 | Msa0824170:intron | 35.0% |
| ATCATCAAAATTCAAGCACG+AGG | - | chr5_3:63300215-63300234 | None:intergenic | 35.0% | |
| GATAAAAAGGGACTCAAGTT+GGG | + | chr5_3:63300393-63300412 | Msa0824170:CDS | 35.0% | |
| ! | ATAAAAAGGGACTCAAGTTG+GGG | + | chr5_3:63300394-63300413 | Msa0824170:CDS | 35.0% |
| ! | GGATTTGCTTTGAATGTGTT+TGG | + | chr5_3:63300441-63300460 | Msa0824170:CDS | 35.0% |
| CACAGTTATAGGCATAACAA+AGG | - | chr5_3:63300570-63300589 | None:intergenic | 35.0% | |
| GCTATATCACTAAATCGTAG+TGG | + | chr5_3:63300614-63300633 | Msa0824170:intron | 35.0% | |
| TAAAATTCCGCAAGGCAATA+GGG | - | chr5_3:63300721-63300740 | None:intergenic | 35.0% | |
| TTAAAATTCCGCAAGGCAAT+AGG | - | chr5_3:63300722-63300741 | None:intergenic | 35.0% | |
| TGGATTGTTAAAATTCCGCA+AGG | - | chr5_3:63300729-63300748 | None:intergenic | 35.0% | |
| !! | GATAGAAGTGCTATCAATCT+GGG | - | chr5_3:63300756-63300775 | None:intergenic | 35.0% |
| !! | TGATAGAAGTGCTATCAATC+TGG | - | chr5_3:63300757-63300776 | None:intergenic | 35.0% |
| !! | TTTTGCTGTATTCCTGCAAA+AGG | - | chr5_3:63300843-63300862 | None:intergenic | 35.0% |
| TGCATTGAAGTACATACATC+AGG | - | chr5_3:63300923-63300942 | None:intergenic | 35.0% | |
| ! | AGTTGCTAGTCTGTCTTATT+TGG | + | chr5_3:63300981-63301000 | Msa0824170:intron | 35.0% |
| !! | TGTCTTATTTGGCAACAACT+TGG | + | chr5_3:63300992-63301011 | Msa0824170:intron | 35.0% |
| !! | GTCTTATTTGGCAACAACTT+GGG | + | chr5_3:63300993-63301012 | Msa0824170:intron | 35.0% |
| ! | TCTTATTTGGCAACAACTTG+GGG | + | chr5_3:63300994-63301013 | Msa0824170:intron | 35.0% |
| !! | ATACGAAAGGCTTTGAAAGA+AGG | + | chr5_3:63301114-63301133 | Msa0824170:CDS | 35.0% |
| ATTCAACTGTTTATTCCTGC+AGG | + | chr5_3:63301293-63301312 | Msa0824170:intron | 35.0% | |
| TGTTTATTCCTGCAGGATAT+TGG | + | chr5_3:63301300-63301319 | Msa0824170:intron | 35.0% | |
| GTTTATTCCTGCAGGATATT+GGG | + | chr5_3:63301301-63301320 | Msa0824170:intron | 35.0% | |
| CTATCATGAAACTGCAAAGA+TGG | - | chr5_3:63301477-63301496 | None:intergenic | 35.0% | |
| CATCTTTGCAGTTTCATGAT+AGG | + | chr5_3:63301475-63301494 | Msa0824170:CDS | 35.0% | |
| TGATAGTAAGTGTGGTTTAC+TGG | - | chr5_3:63301981-63302000 | None:intergenic | 35.0% | |
| GTAAACCACACTTACTATCA+AGG | + | chr5_3:63301981-63302000 | Msa0824170:CDS | 35.0% | |
| ! | AATGAATGGTTTGTAGTCAG+AGG | - | chr5_3:63302038-63302057 | None:intergenic | 35.0% |
| CTACTGTCATACTGATATGT+CGG | - | chr5_3:63302122-63302141 | None:intergenic | 35.0% | |
| TTGCTAACAAACCCATCAAT+TGG | + | chr5_3:63302260-63302279 | Msa0824170:CDS | 35.0% | |
| ! | CGTTGAAGGTATGGTAACAA+AGG | - | chr5_3:63299290-63299309 | None:intergenic | 40.0% |
| CGATTATATGCGATGGAAAG+AGG | + | chr5_3:63299458-63299477 | Msa0824170:CDS | 40.0% | |
| CCATTCATGCACAACAAGTT+TGG | - | chr5_3:63299685-63299704 | None:intergenic | 40.0% | |
| !! | CCAAACTTGTTGTGCATGAA+TGG | + | chr5_3:63299682-63299701 | Msa0824170:intron | 40.0% |
| GTGCATGTTTAGTATCACCT+TGG | + | chr5_3:63299710-63299729 | Msa0824170:intron | 40.0% | |
| ACGAGATTCTGACAAATCCA+AGG | - | chr5_3:63299730-63299749 | None:intergenic | 40.0% | |
| TGGATTTGTCAGAATCTCGT+TGG | + | chr5_3:63299730-63299749 | Msa0824170:intron | 40.0% | |
| CGCAGTTAGTAAGTCAAAGA+TGG | + | chr5_3:63299886-63299905 | Msa0824170:intron | 40.0% | |
| GCTCTATCTAAGCGTTTAGA+TGG | - | chr5_3:63299955-63299974 | None:intergenic | 40.0% | |
| ACTATAGTGATCTCTGACTG+TGG | + | chr5_3:63300062-63300081 | Msa0824170:intron | 40.0% | |
| TGGCTGAGACATAGTTTGAT+TGG | + | chr5_3:63300296-63300315 | Msa0824170:intron | 40.0% | |
| GGATAAAAAGGGACTCAAGT+TGG | + | chr5_3:63300392-63300411 | Msa0824170:intron | 40.0% | |
| AGCATGTCACAGAACAATAG+CGG | - | chr5_3:63300652-63300671 | None:intergenic | 40.0% | |
| !! | TTGTCAAATAGCGGGTATAG+TGG | + | chr5_3:63300687-63300706 | Msa0824170:intron | 40.0% |
| GAAAGCAGCTGATATACGAA+AGG | + | chr5_3:63301101-63301120 | Msa0824170:CDS | 40.0% | |
| !! | GAAAGGCTTTGAAAGAAGGA+AGG | + | chr5_3:63301118-63301137 | Msa0824170:CDS | 40.0% |
| ACTACTGAAACTTCTGCTTC+TGG | + | chr5_3:63301324-63301343 | Msa0824170:CDS | 40.0% | |
| GTATCGTTGAATTTAGGTGC+AGG | - | chr5_3:63301423-63301442 | None:intergenic | 40.0% | |
| TCATGAAACTGCAAAGATGG+TGG | - | chr5_3:63301474-63301493 | None:intergenic | 40.0% | |
| GGTGTATATGAGTGAGATGA+TGG | - | chr5_3:63301534-63301553 | None:intergenic | 40.0% | |
| TCATCTCACTCATATACACC+TGG | + | chr5_3:63301534-63301553 | Msa0824170:CDS | 40.0% | |
| TGATGATAATCCTGGGAAGA+TGG | - | chr5_3:63301591-63301610 | None:intergenic | 40.0% | |
| TGATAATCTTGAGAAGGTGG+AGG | - | chr5_3:63301723-63301742 | None:intergenic | 40.0% | |
| !! | GGTTGATAATCTTGAGAAGG+TGG | - | chr5_3:63301726-63301745 | None:intergenic | 40.0% |
| TAAGAACTGTCTGATCTTGC+AGG | - | chr5_3:63301810-63301829 | None:intergenic | 40.0% | |
| !! | GAGTATTGTTGGTGGTTGTA+GGG | - | chr5_3:63301840-63301859 | None:intergenic | 40.0% |
| !! | TGAGTATTGTTGGTGGTTGT+AGG | - | chr5_3:63301841-63301860 | None:intergenic | 40.0% |
| ! | ACTGATCTGGTGAGTATTGT+TGG | - | chr5_3:63301851-63301870 | None:intergenic | 40.0% |
| CCTAAATTCTGTGACTGATC+TGG | - | chr5_3:63301864-63301883 | None:intergenic | 40.0% | |
| CCAGATCAGTCACAGAATTT+AGG | + | chr5_3:63301861-63301880 | Msa0824170:CDS | 40.0% | |
| GTTTCGTGAGAAGGGTAATT+GGG | - | chr5_3:63301888-63301907 | None:intergenic | 40.0% | |
| AGTTTCGTGAGAAGGGTAAT+TGG | - | chr5_3:63301889-63301908 | None:intergenic | 40.0% | |
| TGAAAATGGGGAAGAGAGTA+AGG | - | chr5_3:63301918-63301937 | None:intergenic | 40.0% | |
| ! | AGGCTGCTTTCTGTAAAACT+TGG | - | chr5_3:63301948-63301967 | None:intergenic | 40.0% |
| ! | TGGGAAGAATATGAAGCATC+GGG | - | chr5_3:63302008-63302027 | None:intergenic | 40.0% |
| CTGGGAAGAATATGAAGCAT+CGG | - | chr5_3:63302009-63302028 | None:intergenic | 40.0% | |
| ! | TCTGCTGCTGGAAATGTTTT+GGG | - | chr5_3:63302066-63302085 | None:intergenic | 40.0% |
| ! | TTCTGCTGCTGGAAATGTTT+TGG | - | chr5_3:63302067-63302086 | None:intergenic | 40.0% |
| AACATTTCCAGCAGCAGAAA+TGG | + | chr5_3:63302068-63302087 | Msa0824170:CDS | 40.0% | |
| TACTGATATGTCGGAGTTGT+TGG | - | chr5_3:63302113-63302132 | None:intergenic | 40.0% | |
| !! | AAAGCTGCAAGATTTGCTGT+TGG | + | chr5_3:63302179-63302198 | Msa0824170:CDS | 40.0% |
| !! | AAGCTGCAAGATTTGCTGTT+GGG | + | chr5_3:63302180-63302199 | Msa0824170:CDS | 40.0% |
| ! | TCTCCGAGAATTTTCCATGG+CGG | + | chr5_3:63299247-63299266 | Msa0824170:exon | 45.0% |
| TCTCCGCCATGGAAAATTCT+CGG | - | chr5_3:63299253-63299272 | None:intergenic | 45.0% | |
| TATGGTAACAAAGGCTTCGC+GGG | - | chr5_3:63299281-63299300 | None:intergenic | 45.0% | |
| GTATGGTAACAAAGGCTTCG+CGG | - | chr5_3:63299282-63299301 | None:intergenic | 45.0% | |
| ATGCGATGGAAAGAGGATTG+AGG | + | chr5_3:63299465-63299484 | Msa0824170:CDS | 45.0% | |
| !! | GTTTTGGTGCGATCACTTTG+CGG | - | chr5_3:63299494-63299513 | None:intergenic | 45.0% |
| GTGATACCAAACATGCACTC+AGG | + | chr5_3:63299837-63299856 | Msa0824170:intron | 45.0% | |
| CAAACATGCACTCAGGTTTC+CGG | + | chr5_3:63299844-63299863 | Msa0824170:intron | 45.0% | |
| !! | AAGCGTTTAGATGGACTGTG+AGG | - | chr5_3:63299946-63299965 | None:intergenic | 45.0% |
| AACGCTTAGATAGAGCCTAG+AGG | + | chr5_3:63299959-63299978 | Msa0824170:intron | 45.0% | |
| ACTATAGCCCTATTGCCTTG+CGG | + | chr5_3:63300711-63300730 | Msa0824170:intron | 45.0% | |
| ! | GTGCTATCAATCTGGGATAG+TGG | - | chr5_3:63300749-63300768 | None:intergenic | 45.0% |
| !! | ATTTCTGTTTCTGCTCCAGC+TGG | - | chr5_3:63301071-63301090 | None:intergenic | 45.0% |
| AAACTTCTGCTTCTGGTGCT+GGG | + | chr5_3:63301331-63301350 | Msa0824170:CDS | 45.0% | |
| GCAGATTCTGGTAGTTGACA+GGG | - | chr5_3:63301389-63301408 | None:intergenic | 45.0% | |
| TCGTTGAATTTAGGTGCAGG+AGG | - | chr5_3:63301420-63301439 | None:intergenic | 45.0% | |
| ! | GTGAGATGATGGCGAAACAA+TGG | - | chr5_3:63301523-63301542 | None:intergenic | 45.0% |
| TGATAATCCTGGGAAGATGG+AGG | - | chr5_3:63301588-63301607 | None:intergenic | 45.0% | |
| AGGTGGGTGATGATAATCCT+GGG | - | chr5_3:63301598-63301617 | None:intergenic | 45.0% | |
| TAGGTGGGTGATGATAATCC+TGG | - | chr5_3:63301599-63301618 | None:intergenic | 45.0% | |
| GGTATTCTTGGGAAGTAGGT+GGG | - | chr5_3:63301614-63301633 | None:intergenic | 45.0% | |
| TGGTATTCTTGGGAAGTAGG+TGG | - | chr5_3:63301615-63301634 | None:intergenic | 45.0% | |
| GGATGGTATTCTTGGGAAGT+AGG | - | chr5_3:63301618-63301637 | None:intergenic | 45.0% | |
| TGGAGGAGGATGGTATTCTT+GGG | - | chr5_3:63301625-63301644 | None:intergenic | 45.0% | |
| TGGAGGAGGATGGTATTCTT+GGG | - | chr5_3:63301625-63301644 | None:intergenic | 45.0% | |
| TAATCTTGAGAAGGTGGAGG+AGG | - | chr5_3:63301720-63301739 | None:intergenic | 45.0% | |
| !! | GGGGGTTGATAATCTTGAGA+AGG | - | chr5_3:63301729-63301748 | None:intergenic | 45.0% |
| TGATGGTAATCTTGGGAAGG+TGG | - | chr5_3:63301753-63301772 | None:intergenic | 45.0% | |
| TGGAGGCTGATGGTAATCTT+GGG | - | chr5_3:63301760-63301779 | None:intergenic | 45.0% | |
| TGATGGTAATCTTGGGAAGG+TGG | - | chr5_3:63301753-63301772 | None:intergenic | 45.0% | |
| TGGAGGCTGATGGTAATCTT+GGG | - | chr5_3:63301760-63301779 | None:intergenic | 45.0% | |
| ! | GATCTGGTGAGTATTGTTGG+TGG | - | chr5_3:63301848-63301867 | None:intergenic | 45.0% |
| !! | TATGTCGGAGTTGTTGGCTT+GGG | - | chr5_3:63302107-63302126 | None:intergenic | 45.0% |
| ! | ATATGTCGGAGTTGTTGGCT+TGG | - | chr5_3:63302108-63302127 | None:intergenic | 45.0% |
| ! | TCTGCTATTCTTTCAGGTGG+TGG | - | chr5_3:63302152-63302171 | None:intergenic | 45.0% |
| ACCACCTGAAAGAATAGCAG+AGG | + | chr5_3:63302151-63302170 | Msa0824170:CDS | 45.0% | |
| TGTGCCTCTGCTATTCTTTC+AGG | - | chr5_3:63302158-63302177 | None:intergenic | 45.0% | |
| !! | AGCTGCAAGATTTGCTGTTG+GGG | + | chr5_3:63302181-63302200 | Msa0824170:CDS | 45.0% |
| !!! | ATTTTAATTAAATTTTGATT+AGG | - | chr5_3:63299616-63299635 | None:intergenic | 5.0% |
| !!! | ATAATTTTATAAATATATTG+AGG | - | chr5_3:63300353-63300372 | None:intergenic | 5.0% |
| GTAATTCATCGGCGCGTTGA+AGG | - | chr5_3:63299304-63299323 | None:intergenic | 50.0% | |
| ACGGTGGCTCATTGTGATTC+TGG | + | chr5_3:63299804-63299823 | Msa0824170:intron | 50.0% | |
| CGGAAACCTGAGTGCATGTT+TGG | - | chr5_3:63299846-63299865 | None:intergenic | 50.0% | |
| ATGTGAGTCGTTCGACCTCT+AGG | - | chr5_3:63299977-63299996 | None:intergenic | 50.0% | |
| GAAAGAAGGAAGGAAGCCTG+TGG | + | chr5_3:63301128-63301147 | Msa0824170:CDS | 50.0% | |
| CAGTAGTCCCAATATCCTGC+AGG | - | chr5_3:63301311-63301330 | None:intergenic | 50.0% | |
| GAAACTTCTGCTTCTGGTGC+TGG | + | chr5_3:63301330-63301349 | Msa0824170:CDS | 50.0% | |
| GGCAGATTCTGGTAGTTGAC+AGG | - | chr5_3:63301390-63301409 | None:intergenic | 50.0% | |
| TCTTGGGAAGGATAAACGCC+AGG | - | chr5_3:63301555-63301574 | None:intergenic | 50.0% | |
| TGGAGGAGGATGGTAGTCTT+GGG | - | chr5_3:63301571-63301590 | None:intergenic | 50.0% | |
| ATGGAGGAGGATGGTAGTCT+TGG | - | chr5_3:63301572-63301591 | None:intergenic | 50.0% | |
| TAATCCTGGGAAGATGGAGG+AGG | - | chr5_3:63301585-63301604 | None:intergenic | 50.0% | |
| GTGGAGGAGGATGGTATTCT+TGG | - | chr5_3:63301626-63301645 | None:intergenic | 50.0% | |
| TATTCTTGGGAAGGTGGAGG+AGG | - | chr5_3:63301639-63301658 | None:intergenic | 50.0% | |
| TGGTATTCTTGGGAAGGTGG+AGG | - | chr5_3:63301642-63301661 | None:intergenic | 50.0% | |
| GGATGGTATTCTTGGGAAGG+TGG | - | chr5_3:63301645-63301664 | None:intergenic | 50.0% | |
| GGAGGATGGTATTCTTGGGA+AGG | - | chr5_3:63301621-63301640 | None:intergenic | 50.0% | |
| GTGGAGGAGGATGGTATTCT+TGG | - | chr5_3:63301626-63301645 | None:intergenic | 50.0% | |
| TAATCTTGGGAAGGTGGAGG+AGG | - | chr5_3:63301666-63301685 | None:intergenic | 50.0% | |
| TGGTAATCTTGGGAAGGTGG+AGG | - | chr5_3:63301669-63301688 | None:intergenic | 50.0% | |
| GGATGGTAATCTTGGGAAGG+TGG | - | chr5_3:63301672-63301691 | None:intergenic | 50.0% | |
| GGAGGATGGTAATCTTGGGA+AGG | - | chr5_3:63301675-63301694 | None:intergenic | 50.0% | |
| TGGCGGAGGATGGTAATCTT+GGG | - | chr5_3:63301679-63301698 | None:intergenic | 50.0% | |
| TGGAGGAGGATGGTAATCCT+GGG | - | chr5_3:63301706-63301725 | None:intergenic | 50.0% | |
| TAATCTTGGGAAGGTGGAGG+GGG | - | chr5_3:63301666-63301685 | None:intergenic | 50.0% | |
| GTAATCTTGGGAAGGTGGAG+GGG | - | chr5_3:63301667-63301686 | None:intergenic | 50.0% | |
| GGTAATCTTGGGAAGGTGGA+GGG | - | chr5_3:63301668-63301687 | None:intergenic | 50.0% | |
| TGGTAATCTTGGGAAGGTGG+AGG | - | chr5_3:63301669-63301688 | None:intergenic | 50.0% | |
| GGCTGATGGTAATCTTGGGA+AGG | - | chr5_3:63301756-63301775 | None:intergenic | 50.0% | |
| GTGGAGGCTGATGGTAATCT+TGG | - | chr5_3:63301761-63301780 | None:intergenic | 50.0% | |
| TGGTAATCTTGGGAAGGTGG+AGG | - | chr5_3:63301669-63301688 | None:intergenic | 50.0% | |
| GGCTGATGGTAATCTTGGGA+AGG | - | chr5_3:63301756-63301775 | None:intergenic | 50.0% | |
| GTGGAGGCTGATGGTAATCT+TGG | - | chr5_3:63301761-63301780 | None:intergenic | 50.0% | |
| GAACTGTCTGATCTTGCAGG+TGG | - | chr5_3:63301807-63301826 | None:intergenic | 50.0% | |
| ATGGGGAAGAGAGTAAGGAG+CGG | - | chr5_3:63301913-63301932 | None:intergenic | 50.0% | |
| TACAGAAAGCAGCCTACCGT+CGG | + | chr5_3:63301953-63301972 | Msa0824170:CDS | 50.0% | |
| ! | GTGTGGTTTACTGGTACCGA+CGG | - | chr5_3:63301972-63301991 | None:intergenic | 50.0% |
| TGTAGTCAGAGGAGCTGACT+GGG | - | chr5_3:63302027-63302046 | None:intergenic | 50.0% | |
| TTGTAGTCAGAGGAGCTGAC+TGG | - | chr5_3:63302028-63302047 | None:intergenic | 50.0% | |
| GACAGTACCATTTCTGCTGC+TGG | - | chr5_3:63302078-63302097 | None:intergenic | 50.0% | |
| CAGCAGAAATGGTACTGTCC+CGG | + | chr5_3:63302079-63302098 | Msa0824170:CDS | 50.0% | |
| ! | CTATTCTTTCAGGTGGTGGC+TGG | - | chr5_3:63302148-63302167 | None:intergenic | 50.0% |
| GCCTCTGCTATTCTTTCAGG+TGG | - | chr5_3:63302155-63302174 | None:intergenic | 50.0% | |
| !! | AAGATTTGCTGTTGGGGCAC+TGG | + | chr5_3:63302187-63302206 | Msa0824170:CDS | 50.0% |
| TCATCGGCGCGTTGAAGGTA+TGG | - | chr5_3:63299299-63299318 | None:intergenic | 55.0% | |
| GCAGACAAGCAAGATCGTGC+TGG | + | chr5_3:63300468-63300487 | Msa0824170:CDS | 55.0% | |
| ACTAGGAGAGCTCGACAGAG+CGG | - | chr5_3:63301184-63301203 | None:intergenic | 55.0% | |
| GAGGAACGCTTGGCAGATTC+TGG | - | chr5_3:63301401-63301420 | None:intergenic | 55.0% | |
| TTAGGTGCAGGAGGAACGCT+TGG | - | chr5_3:63301411-63301430 | None:intergenic | 55.0% | |
| ! | GGAGGATGGTAGTCTTGGGA+AGG | - | chr5_3:63301567-63301586 | None:intergenic | 55.0% |
| ! | GTGGCGGAGGATGGTAATCT+TGG | - | chr5_3:63301680-63301699 | None:intergenic | 55.0% |
| TGGTAATCCTGGGAAGGTGG+CGG | - | chr5_3:63301696-63301715 | None:intergenic | 55.0% | |
| GGATGGTAATCCTGGGAAGG+TGG | - | chr5_3:63301699-63301718 | None:intergenic | 55.0% | |
| GGAGGATGGTAATCCTGGGA+AGG | - | chr5_3:63301702-63301721 | None:intergenic | 55.0% | |
| GTGGAGGAGGATGGTAATCC+TGG | - | chr5_3:63301707-63301726 | None:intergenic | 55.0% | |
| CTTGAGAAGGTGGAGGAGGA+TGG | - | chr5_3:63301716-63301735 | None:intergenic | 55.0% | |
| ATCTTGCAGGTGGAGGCTGA+TGG | - | chr5_3:63301797-63301816 | None:intergenic | 55.0% | |
| CTGTCTGATCTTGCAGGTGG+AGG | - | chr5_3:63301804-63301823 | None:intergenic | 55.0% | |
| GAGCGGGAGTTTCGTGAGAA+GGG | - | chr5_3:63301896-63301915 | None:intergenic | 55.0% | |
| TGGGGAAGAGAGTAAGGAGC+GGG | - | chr5_3:63301912-63301931 | None:intergenic | 55.0% | |
| !! | GGTTTACTGGTACCGACGGT+AGG | - | chr5_3:63301968-63301987 | None:intergenic | 55.0% |
| ! | CGGGCCCTTGATAGTAAGTG+TGG | - | chr5_3:63301989-63302008 | None:intergenic | 55.0% |
| !! | GAGTTGTTGGCTTGGGTTCC+GGG | - | chr5_3:63302100-63302119 | None:intergenic | 55.0% |
| !! | GGAGTTGTTGGCTTGGGTTC+CGG | - | chr5_3:63302101-63302120 | None:intergenic | 55.0% |
| GAAGGAAGGAAGCCTGTGGC+TGG | + | chr5_3:63301132-63301151 | Msa0824170:CDS | 60.0% | |
| CCTGGGAAGATGGAGGAGGA+TGG | - | chr5_3:63301581-63301600 | None:intergenic | 60.0% | |
| CCATCCTCCTCCATCTTCCC+AGG | + | chr5_3:63301578-63301597 | Msa0824170:CDS | 60.0% | |
| CTTGGGAAGGTGGAGGAGGA+TGG | - | chr5_3:63301635-63301654 | None:intergenic | 60.0% | |
| CTTGGGAAGGTGGAGGAGGA+TGG | - | chr5_3:63301635-63301654 | None:intergenic | 60.0% | |
| ! | TAATCCTGGGAAGGTGGCGG+AGG | - | chr5_3:63301693-63301712 | None:intergenic | 60.0% |
| CTTGGGAAGGTGGAGGCTGA+TGG | - | chr5_3:63301770-63301789 | None:intergenic | 60.0% | |
| GGAGCGGGAGTTTCGTGAGA+AGG | - | chr5_3:63301897-63301916 | None:intergenic | 60.0% | |
| GGTCCTCGTCACCAGCAGGT+GGG | - | chr5_3:63301158-63301177 | None:intergenic | 65.0% | |
| AGGTCCTCGTCACCAGCAGG+TGG | - | chr5_3:63301159-63301178 | None:intergenic | 65.0% | |
| GACAGGTCCTCGTCACCAGC+AGG | - | chr5_3:63301162-63301181 | None:intergenic | 65.0% | |
| GAGAGCTCGACAGAGCGGAC+AGG | - | chr5_3:63301179-63301198 | None:intergenic | 65.0% | |
| CGCGGGTTCGTTCTCCGCCA+TGG | - | chr5_3:63299264-63299283 | None:intergenic | 70.0% | |
| ! | TGGCCCACCTGCTGGTGACG+AGG | + | chr5_3:63301152-63301171 | Msa0824170:CDS | 70.0% |
| !! | CCTGGGAAGGTGGCGGAGGA+TGG | - | chr5_3:63301689-63301708 | None:intergenic | 70.0% |
| CCATCCTCCGCCACCTTCCC+AGG | + | chr5_3:63301686-63301705 | Msa0824170:CDS | 70.0% | |
| CCAGCAGGTGGGCCAGCCAC+AGG | - | chr5_3:63301147-63301166 | None:intergenic | 75.0% | |
| ! | CCTGTGGCTGGCCCACCTGC+TGG | + | chr5_3:63301144-63301163 | Msa0824170:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 63299198 | 63302289 | 63299198 | ID=Msa0824170;Name=Msa0824170 |
| chr5_3 | mRNA | 63299198 | 63302289 | 63299198 | ID=Msa0824170-mRNA-1;Parent=Msa0824170;Name=Msa0824170-mRNA-1;_AED=0.11;_eAED=0.12;_QI=65|1|0.83|1|1|1|6|0|497 |
| chr5_3 | exon | 63299198 | 63299353 | 63299198 | ID=Msa0824170-mRNA-1:exon:19748;Parent=Msa0824170-mRNA-1 |
| chr5_3 | exon | 63299456 | 63299556 | 63299456 | ID=Msa0824170-mRNA-1:exon:19749;Parent=Msa0824170-mRNA-1 |
| chr5_3 | exon | 63300393 | 63300502 | 63300393 | ID=Msa0824170-mRNA-1:exon:19750;Parent=Msa0824170-mRNA-1 |
| chr5_3 | exon | 63300850 | 63300925 | 63300850 | ID=Msa0824170-mRNA-1:exon:19751;Parent=Msa0824170-mRNA-1 |
| chr5_3 | exon | 63301072 | 63301212 | 63301072 | ID=Msa0824170-mRNA-1:exon:19752;Parent=Msa0824170-mRNA-1 |
| chr5_3 | exon | 63301315 | 63302289 | 63301315 | ID=Msa0824170-mRNA-1:exon:19753;Parent=Msa0824170-mRNA-1 |
| chr5_3 | five_prime_UTR | 63299198 | 63299262 | 63299198 | ID=Msa0824170-mRNA-1:five_prime_utr;Parent=Msa0824170-mRNA-1 |
| chr5_3 | CDS | 63299263 | 63299353 | 63299263 | ID=Msa0824170-mRNA-1:cds;Parent=Msa0824170-mRNA-1 |
| chr5_3 | CDS | 63299456 | 63299556 | 63299456 | ID=Msa0824170-mRNA-1:cds;Parent=Msa0824170-mRNA-1 |
| chr5_3 | CDS | 63300393 | 63300502 | 63300393 | ID=Msa0824170-mRNA-1:cds;Parent=Msa0824170-mRNA-1 |
| chr5_3 | CDS | 63300850 | 63300925 | 63300850 | ID=Msa0824170-mRNA-1:cds;Parent=Msa0824170-mRNA-1 |
| chr5_3 | CDS | 63301072 | 63301212 | 63301072 | ID=Msa0824170-mRNA-1:cds;Parent=Msa0824170-mRNA-1 |
| chr5_3 | CDS | 63301315 | 63302289 | 63301315 | ID=Msa0824170-mRNA-1:cds;Parent=Msa0824170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
