Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826400 | XP_003617999.1 | 98.144 | 485 | 9 | 0 | 1 | 485 | 1 | 485 | 0.0 | 985 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826400 | sp|Q9P775|YBEG_SCHPO | 36.196 | 489 | 275 | 12 | 1 | 473 | 3 | 470 | 6.65e-89 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826400 | G7K4Y5 | 98.144 | 485 | 9 | 0 | 1 | 485 | 1 | 485 | 0.0 | 985 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0826400 | Msa0865790 | 0.846705 | 1.835950e-59 | -8.615850e-47 |
| Msa0826400 | Msa1407550 | 0.819895 | 9.135468e-53 | -8.615850e-47 |
| Msa0383690 | Msa0826400 | 0.827340 | 1.651863e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826400 | MtrunA17_Chr5g0447911 | 98.144 | 485 | 9 | 0 | 1 | 485 | 1 | 485 | 0.0 | 985 |
| Msa0826400 | MtrunA17_Chr2g0283891 | 25.778 | 225 | 155 | 3 | 252 | 473 | 62 | 277 | 2.11e-13 | 71.2 |
| Msa0826400 | MtrunA17_Chr2g0283891 | 27.811 | 169 | 115 | 1 | 250 | 418 | 106 | 267 | 9.05e-11 | 63.2 |
| Msa0826400 | MtrunA17_Chr4g0052291 | 26.816 | 179 | 115 | 3 | 250 | 419 | 177 | 348 | 8.08e-12 | 67.0 |
| Msa0826400 | MtrunA17_Chr1g0185501 | 26.339 | 224 | 148 | 6 | 242 | 462 | 60 | 269 | 1.15e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0826400 | AT4G18905.1 | 60.563 | 497 | 175 | 8 | 1 | 479 | 1 | 494 | 0.0 | 563 |
| Msa0826400 | AT4G18905.2 | 58.185 | 507 | 181 | 8 | 1 | 479 | 1 | 504 | 0.0 | 554 |
| Msa0826400 | AT4G18900.1 | 58.405 | 464 | 170 | 7 | 21 | 474 | 5 | 455 | 7.47e-178 | 507 |
| Msa0826400 | AT4G35370.1 | 52.609 | 460 | 166 | 7 | 2 | 456 | 3 | 415 | 7.10e-162 | 465 |
| Msa0826400 | AT1G29260.1 | 27.016 | 248 | 154 | 6 | 235 | 473 | 47 | 276 | 1.08e-14 | 75.5 |
| Msa0826400 | AT5G58230.1 | 28.333 | 180 | 113 | 3 | 250 | 420 | 177 | 349 | 1.44e-13 | 72.8 |
| Msa0826400 | AT5G13480.2 | 33.333 | 162 | 89 | 7 | 267 | 424 | 275 | 421 | 6.89e-12 | 68.2 |
| Msa0826400 | AT5G13480.3 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.00e-12 | 68.2 |
| Msa0826400 | AT5G13480.4 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.76e-12 | 68.2 |
| Msa0826400 | AT5G13480.1 | 33.333 | 162 | 89 | 7 | 267 | 424 | 264 | 410 | 8.28e-12 | 68.2 |
| Msa0826400 | AT2G43770.1 | 26.840 | 231 | 150 | 7 | 250 | 474 | 95 | 312 | 1.52e-11 | 66.2 |
| Msa0826400 | AT4G11110.1 | 29.878 | 164 | 103 | 4 | 256 | 418 | 777 | 929 | 4.79e-11 | 65.9 |
Find 148 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGAAGATGAAGATTT+AGG | 0.118417 | 5_3:-66732153 | None:intergenic |
| TGGGACCATCCATTGAAATT+TGG | 0.157308 | 5_3:+66735747 | Msa0826400:CDS |
| GGTTGCATGTTCCAACATTT+TGG | 0.201619 | 5_3:+66739119 | Msa0826400:three_prime_UTR |
| AAGAAGAAGATGAAGATTTA+GGG | 0.230024 | 5_3:-66732152 | None:intergenic |
| TTATACTTAAGATTGATATT+TGG | 0.252354 | 5_3:+66739167 | Msa0826400:three_prime_UTR |
| AACCCATTCTTGTTGGCTAT+TGG | 0.275591 | 5_3:+66738823 | Msa0826400:CDS |
| CTGACAAGCGAGTGAAGATT+TGG | 0.281740 | 5_3:+66737278 | Msa0826400:CDS |
| TTCTTGGCTGTTGGTTCAAT+GGG | 0.292446 | 5_3:+66735728 | Msa0826400:CDS |
| CTTCTTGGCTGTTGGTTCAA+TGG | 0.294754 | 5_3:+66735727 | Msa0826400:CDS |
| TCATTATTATTATATTTAAT+AGG | 0.294984 | 5_3:-66739541 | None:intergenic |
| ATTAGGTGCTGCCGTATTAT+AGG | 0.306215 | 5_3:-66738374 | None:intergenic |
| GGATTTGAGTTATTCAGTTC+GGG | 0.308747 | 5_3:+66734815 | Msa0826400:intron |
| GGGACCATCCATTGAAATTT+GGG | 0.330425 | 5_3:+66735748 | Msa0826400:CDS |
| CGGTGCGGCGGTATTGTTGC+CGG | 0.335986 | 5_3:-66732189 | None:intergenic |
| GCTTCTTGCGACTGGATCTA+TGG | 0.347478 | 5_3:+66738481 | Msa0826400:intron |
| TGGCAAAGAGAAAAGGAAAA+AGG | 0.348457 | 5_3:+66735891 | Msa0826400:CDS |
| GTAAGGACGCCGTCGCATTC+TGG | 0.349631 | 5_3:+66737937 | Msa0826400:CDS |
| AACTACAACGGTTGGGCATT+GGG | 0.354724 | 5_3:-66739315 | None:intergenic |
| GGAGTATGATTCTGAAGATA+TGG | 0.361330 | 5_3:+66734984 | Msa0826400:CDS |
| TATGGTAACAGGGAACTTCT+TGG | 0.361380 | 5_3:+66735712 | Msa0826400:intron |
| CAAGTTCATATCGCGGGTAT+TGG | 0.366174 | 5_3:-66735214 | None:intergenic |
| TCTTCAATTTCATCTTTAGA+AGG | 0.369876 | 5_3:-66732320 | None:intergenic |
| ACAATACCGCCGCACCGTTC+CGG | 0.371804 | 5_3:+66732195 | Msa0826400:five_prime_UTR |
| AAGTCCAAACATTGTCTTCA+TGG | 0.376616 | 5_3:-66739070 | None:intergenic |
| CTATAACTCAATATTATATC+AGG | 0.377134 | 5_3:-66739029 | None:intergenic |
| CCATTCTTGTTGGCTATTGG+AGG | 0.382353 | 5_3:+66738826 | Msa0826400:CDS |
| CCCCTTAAAGGAGGAGAAAA+AGG | 0.386260 | 5_3:+66735297 | Msa0826400:CDS |
| GCTTCAATGATATACAGTTT+TGG | 0.391642 | 5_3:+66739250 | Msa0826400:three_prime_UTR |
| AGGATTTGAGTTATTCAGTT+CGG | 0.394366 | 5_3:+66734814 | Msa0826400:intron |
| CTGCCCATGAAGACAATGTT+TGG | 0.395501 | 5_3:+66739066 | Msa0826400:three_prime_UTR |
| TCTGCTTTCGAAACCCCTTT+CGG | 0.399941 | 5_3:-66732278 | None:intergenic |
| ATTTGTAACAGGTAAAACTT+TGG | 0.407331 | 5_3:+66738590 | Msa0826400:intron |
| GAAGGCATCTCTCGAAAATA+CGG | 0.412196 | 5_3:+66738974 | Msa0826400:CDS |
| TTTGTAACAGGTAAAACTTT+GGG | 0.415218 | 5_3:+66738591 | Msa0826400:intron |
| GCTGTGCAAAGTGGAAATTC+CGG | 0.418822 | 5_3:-66735261 | None:intergenic |
| TCACCATGATATCATCATTC+CGG | 0.419784 | 5_3:+66735242 | Msa0826400:CDS |
| AAGATTTGGGATGTTGTTGC+TGG | 0.420460 | 5_3:+66737292 | Msa0826400:CDS |
| CACAGGTTCAAGCAGTTGCT+TGG | 0.423769 | 5_3:+66737650 | Msa0826400:intron |
| CAACTACAACGGTTGGGCAT+TGG | 0.427953 | 5_3:-66739316 | None:intergenic |
| GGTGCGGCGGTATTGTTGCC+GGG | 0.428879 | 5_3:-66732188 | None:intergenic |
| TGCAGAGGATTCCAAAATGT+TGG | 0.429002 | 5_3:-66739130 | None:intergenic |
| AACAGGAATCAACCTCAATC+CGG | 0.434693 | 5_3:+66739004 | Msa0826400:CDS |
| TTGCTTGGAACAAGGAATAC+AGG | 0.435006 | 5_3:+66737099 | Msa0826400:CDS |
| GAAAATACGGGAAATTCAAC+AGG | 0.436216 | 5_3:+66738987 | Msa0826400:CDS |
| ATTATTATATTTAATAGGTT+AGG | 0.443086 | 5_3:-66739536 | None:intergenic |
| TGATATTACCGACGCCTTGA+AGG | 0.443645 | 5_3:+66733380 | Msa0826400:CDS |
| AAGGCCCTTCAAAACATGTT+AGG | 0.446137 | 5_3:-66739292 | None:intergenic |
| CAATTTCGTGGATTCCGAAA+GGG | 0.447261 | 5_3:+66732264 | Msa0826400:CDS |
| TTAACCGTAGCTGGTGCAAT+TGG | 0.448209 | 5_3:+66733333 | Msa0826400:CDS |
| ATCCATGTTGAGATCCTTCA+AGG | 0.448626 | 5_3:-66733394 | None:intergenic |
| TTCTTCTTCTCTCGCGCCCC+CGG | 0.450355 | 5_3:+66732170 | Msa0826400:five_prime_UTR |
| TTGGCTATTGGAGGCTCAAA+GGG | 0.450629 | 5_3:+66738835 | Msa0826400:CDS |
| GTCATGCAGCTTCTTGCGAC+TGG | 0.450737 | 5_3:+66738473 | Msa0826400:intron |
| CCTCCAATAGCCAACAAGAA+TGG | 0.451448 | 5_3:-66738826 | None:intergenic |
| TCTTTAGATGCAACAGAAGA+TGG | 0.451968 | 5_3:-66738631 | None:intergenic |
| TACTCAACTGTGAACAAGTT+GGG | 0.452382 | 5_3:+66739098 | Msa0826400:three_prime_UTR |
| GCACAACAGATCCTTCTTAG+TGG | 0.453648 | 5_3:+66737682 | Msa0826400:CDS |
| CAAACATTGTCTTCATGGGC+AGG | 0.454570 | 5_3:-66739065 | None:intergenic |
| ACAGGGAACTTCTTGGCTGT+TGG | 0.465917 | 5_3:+66735719 | Msa0826400:intron |
| TTATGATTGCCGCAATTTCG+TGG | 0.471697 | 5_3:+66732252 | Msa0826400:exon |
| ACTCAGTACTTGGTCTTGCT+TGG | 0.472198 | 5_3:+66737084 | Msa0826400:CDS |
| CTCCAATAGCCAACAAGAAT+GGG | 0.472248 | 5_3:-66738825 | None:intergenic |
| ATCAAGGTCCCAAATTTCAA+TGG | 0.478209 | 5_3:-66735756 | None:intergenic |
| ACAGGAATCAACCTCAATCC+GGG | 0.485663 | 5_3:+66739005 | Msa0826400:CDS |
| GTTTGATCATACTGTTGCCT+TGG | 0.487656 | 5_3:+66737708 | Msa0826400:CDS |
| AGTCACACCGACTCAGTACT+TGG | 0.488863 | 5_3:+66737074 | Msa0826400:CDS |
| GACTGGATCTATGGATAAAA+CGG | 0.491616 | 5_3:+66738490 | Msa0826400:CDS |
| TCCTGCCATGCAATGACAAA+AGG | 0.496658 | 5_3:-66739383 | None:intergenic |
| TACCTCTGTATCCTATAATA+CGG | 0.501888 | 5_3:+66738363 | Msa0826400:CDS |
| AAACTTTGCAGAAGGATGTA+AGG | 0.503411 | 5_3:+66737920 | Msa0826400:intron |
| GGTAGAGCCATGTGTGGTGT+TGG | 0.505588 | 5_3:+66735867 | Msa0826400:CDS |
| GTAGAGCCATGTGTGGTGTT+GGG | 0.506307 | 5_3:+66735868 | Msa0826400:CDS |
| GATGTACCTAGTGAGAGTGT+TGG | 0.506656 | 5_3:-66732351 | None:intergenic |
| CTCAATATTATATCAGGCCC+CGG | 0.510053 | 5_3:-66739023 | None:intergenic |
| AATGGATCATCACTCTGATA+AGG | 0.510295 | 5_3:+66737330 | Msa0826400:CDS |
| AGAGGACAACCCATTCTTGT+TGG | 0.510888 | 5_3:+66738816 | Msa0826400:CDS |
| AAACATGTTAGGAAATATGA+TGG | 0.511291 | 5_3:-66739281 | None:intergenic |
| TTATATCAGGCCCCGGATTG+AGG | 0.518416 | 5_3:-66739016 | None:intergenic |
| TAGATGCAACAGAAGATGGT+TGG | 0.521703 | 5_3:-66738627 | None:intergenic |
| CAGCGCTGATGTAGAGAGCT+TGG | 0.522228 | 5_3:+66737975 | Msa0826400:CDS |
| AATTTCGTGGATTCCGAAAG+GGG | 0.523413 | 5_3:+66732265 | Msa0826400:CDS |
| TGTTGGGTGGCAAAGAGAAA+AGG | 0.525906 | 5_3:+66735884 | Msa0826400:CDS |
| TGGAAAGTGTACTATTACAA+TGG | 0.526286 | 5_3:+66737312 | Msa0826400:CDS |
| TTTATACACTTACAACATCA+AGG | 0.526703 | 5_3:-66735772 | None:intergenic |
| GAGTTATTCAGTTCGGGGAA+CGG | 0.531807 | 5_3:+66734821 | Msa0826400:CDS |
| GTTGGCTATTGGAGGCTCAA+AGG | 0.532924 | 5_3:+66738834 | Msa0826400:CDS |
| AATTTCCACTTTGCACAGCA+TGG | 0.534774 | 5_3:+66735265 | Msa0826400:CDS |
| ATTCCGGAATGATGATATCA+TGG | 0.539451 | 5_3:-66735245 | None:intergenic |
| GCACATGCTTTAACCGTAGC+TGG | 0.541928 | 5_3:+66733324 | Msa0826400:CDS |
| TGACAAGCGAGTGAAGATTT+GGG | 0.543098 | 5_3:+66737279 | Msa0826400:CDS |
| TACGGTCAGAGTGGTGGTGC+CGG | 0.545155 | 5_3:-66732214 | None:intergenic |
| GATCAAACGAACCACTAAGA+AGG | 0.549508 | 5_3:-66737693 | None:intergenic |
| TCAATTTCATCTTTAGAAGG+AGG | 0.552892 | 5_3:-66732317 | None:intergenic |
| TGGGACACCTTATCTGATGA+AGG | 0.553782 | 5_3:+66738956 | Msa0826400:CDS |
| AGGTCCCAAATTTCAATGGA+TGG | 0.555988 | 5_3:-66735752 | None:intergenic |
| AGAGATGCCTTCATCAGATA+AGG | 0.558744 | 5_3:-66738963 | None:intergenic |
| TCAGAGTGGTGGTGCCGGAA+CGG | 0.561104 | 5_3:-66732209 | None:intergenic |
| CATGGATAACTATGATGAAG+AGG | 0.561882 | 5_3:+66733410 | Msa0826400:CDS |
| GTGCGGCGGTATTGTTGCCG+GGG | 0.564212 | 5_3:-66732187 | None:intergenic |
| GAATGGGTTGTCCTCTGAGA+AGG | 0.566271 | 5_3:-66738809 | None:intergenic |
| TTTACCAATTGCACCAGCTA+CGG | 0.566294 | 5_3:-66733337 | None:intergenic |
| TGATGTAGAGAGCTTGGCAT+GGG | 0.570407 | 5_3:+66737981 | Msa0826400:CDS |
| CTACTCAACTGTGAACAAGT+TGG | 0.572927 | 5_3:+66739097 | Msa0826400:three_prime_UTR |
| TAACTCTGTTGTACACGATA+CGG | 0.573513 | 5_3:-66732232 | None:intergenic |
| AATATACAAGTTCATATCGC+GGG | 0.574203 | 5_3:-66735220 | None:intergenic |
| ACTTGGTCTTGCTTGGAACA+AGG | 0.574512 | 5_3:+66737091 | Msa0826400:CDS |
| TCATTGCATGGCAGGAACAT+CGG | 0.576715 | 5_3:+66739390 | Msa0826400:three_prime_UTR |
| CGCCTTGAAGGATCTCAACA+TGG | 0.577123 | 5_3:+66733392 | Msa0826400:CDS |
| AGTCCAAACATTGTCTTCAT+GGG | 0.580797 | 5_3:-66739069 | None:intergenic |
| ATTATAGGATACAGAGGTAA+CGG | 0.581773 | 5_3:-66738359 | None:intergenic |
| AAGGCATCTCTCGAAAATAC+GGG | 0.582528 | 5_3:+66738975 | Msa0826400:CDS |
| TTGCCACCCAACACCACACA+TGG | 0.587638 | 5_3:-66735874 | None:intergenic |
| TTTCGGAATCCACGAAATTG+CGG | 0.589319 | 5_3:-66732261 | None:intergenic |
| CAAACAACAACAGAATCAGT+TGG | 0.589362 | 5_3:-66735024 | None:intergenic |
| GCAATTGGTAAACCATCCAA+TGG | 0.595294 | 5_3:+66733348 | Msa0826400:CDS |
| AAACATTGTCTTCATGGGCA+GGG | 0.595322 | 5_3:-66739064 | None:intergenic |
| GCAATTTCGTGGATTCCGAA+AGG | 0.597881 | 5_3:+66732263 | Msa0826400:CDS |
| TCAAGCCATGCTGTGCAAAG+TGG | 0.598638 | 5_3:-66735270 | None:intergenic |
| ACAAAAGAGTGCTCAGTGTG+TGG | 0.598926 | 5_3:-66738006 | None:intergenic |
| CAGTCCGAACATCAAAACAT+TGG | 0.599001 | 5_3:-66738276 | None:intergenic |
| GAAATCAACAAAATACAAAG+AGG | 0.602238 | 5_3:+66737049 | Msa0826400:intron |
| TGTTAGGTGAGTCTTGAAGA+TGG | 0.604591 | 5_3:+66738247 | Msa0826400:intron |
| ACAACGGTTGGGCATTGGGA+AGG | 0.606527 | 5_3:-66739311 | None:intergenic |
| GAGCCATGTGTGGTGTTGGG+TGG | 0.607120 | 5_3:+66735871 | Msa0826400:CDS |
| GAAGGGTAATCTCATTACAA+TGG | 0.608417 | 5_3:-66739466 | None:intergenic |
| CTGATGTAGAGAGCTTGGCA+TGG | 0.610832 | 5_3:+66737980 | Msa0826400:CDS |
| TCATCTCCAACACTCTCACT+AGG | 0.616650 | 5_3:+66732345 | Msa0826400:CDS |
| TGTTGTTTGTGCGCGTACTG+AGG | 0.617359 | 5_3:+66735038 | Msa0826400:CDS |
| CCATGCAATGACAAAAGGCA+AGG | 0.617636 | 5_3:-66739378 | None:intergenic |
| GTTGAGATCCTTCAAGGCGT+CGG | 0.622922 | 5_3:-66733388 | None:intergenic |
| AGTAGCATTCTGCACAGATG+TGG | 0.625228 | 5_3:-66738311 | None:intergenic |
| ATTCTGCACAGATGTGGCAT+TGG | 0.628001 | 5_3:-66738305 | None:intergenic |
| GAATATACAAGTTCATATCG+CGG | 0.630543 | 5_3:-66735221 | None:intergenic |
| GCATTCTGGCTATACGTGGT+CGG | 0.636465 | 5_3:+66737951 | Msa0826400:CDS |
| AGCAAGACCAAGTACTGAGT+CGG | 0.637057 | 5_3:-66737081 | None:intergenic |
| CACGTATAGCCAGAATGCGA+CGG | 0.645659 | 5_3:-66737946 | None:intergenic |
| GATTTGAGTTATTCAGTTCG+GGG | 0.646430 | 5_3:+66734816 | Msa0826400:CDS |
| TGCGGCGGTATTGTTGCCGG+GGG | 0.649703 | 5_3:-66732186 | None:intergenic |
| CGTCGCATTCTGGCTATACG+TGG | 0.650851 | 5_3:+66737947 | Msa0826400:CDS |
| GTGGTGCCGGAACGGTGCGG+CGG | 0.654436 | 5_3:-66732201 | None:intergenic |
| CTGGCAGGTATGGATACTTG+AGG | 0.666889 | 5_3:+66735188 | Msa0826400:intron |
| CAGGAATCAACCTCAATCCG+GGG | 0.674342 | 5_3:+66739006 | Msa0826400:CDS |
| GTGGTGGTGCCGGAACGGTG+CGG | 0.676805 | 5_3:-66732204 | None:intergenic |
| ACACGATACGGTCAGAGTGG+TGG | 0.684721 | 5_3:-66732220 | None:intergenic |
| TATGATGAAGAGGATGACAA+AGG | 0.685139 | 5_3:+66733420 | Msa0826400:CDS |
| TGCCGTATTATAGGATACAG+AGG | 0.687331 | 5_3:-66738365 | None:intergenic |
| TGTACACGATACGGTCAGAG+TGG | 0.702564 | 5_3:-66732223 | None:intergenic |
| TGATGAGGTAGAGCCATGTG+TGG | 0.762909 | 5_3:+66735861 | Msa0826400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | chr5_3:66738756-66738775 | Msa0826400:intron | 0.0% |
| !!! | ATGTAATATATATGTTTTTA+AGG | + | chr5_3:66734960-66734979 | Msa0826400:intron | 10.0% |
| !! | ATTATTATATTTAATAGGTT+AGG | - | chr5_3:66739539-66739558 | None:intergenic | 10.0% |
| !! | TAAAACTTATAAGATGAAAA+TGG | + | chr5_3:66732784-66732803 | Msa0826400:intron | 15.0% |
| !! | AAAACTTATAAGATGAAAAT+GGG | + | chr5_3:66732785-66732804 | Msa0826400:intron | 15.0% |
| !! | CAATAATAATTAATACAAGA+TGG | - | chr5_3:66733239-66733258 | None:intergenic | 15.0% |
| !!! | TAATATATATGTTTTTAAGG+AGG | + | chr5_3:66734963-66734982 | Msa0826400:intron | 15.0% |
| !! | ATCTTAAAATAGTTTCATTA+TGG | + | chr5_3:66735694-66735713 | Msa0826400:intron | 15.0% |
| !! | AAAAAAATCCTTGTTAAATA+GGG | - | chr5_3:66735806-66735825 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTAACTAACTTT+TGG | + | chr5_3:66736714-66736733 | Msa0826400:intron | 15.0% |
| !!! | ATCAAGTTTTAATACAAAAA+TGG | - | chr5_3:66736978-66736997 | None:intergenic | 15.0% |
| !! | TTTAAATGCTTCATTAATTA+CGG | + | chr5_3:66737427-66737446 | Msa0826400:intron | 15.0% |
| !!! | TTTTACAAATTACTTAAGAA+AGG | - | chr5_3:66737544-66737563 | None:intergenic | 15.0% |
| !! | AAACAATTTAAATAAGTCAA+GGG | - | chr5_3:66737589-66737608 | None:intergenic | 15.0% |
| !! | ATAATAAATAAAACTAACGA+GGG | - | chr5_3:66738142-66738161 | None:intergenic | 15.0% |
| !! | TATAATAAATAAAACTAACG+AGG | - | chr5_3:66738143-66738162 | None:intergenic | 15.0% |
| !! | TTATACTTAAGATTGATATT+TGG | + | chr5_3:66739167-66739186 | Msa0826400:three_prime_UTR | 15.0% |
| !!! | TTATAAGTTTTAATCGCTTA+TGG | - | chr5_3:66732776-66732795 | None:intergenic | 20.0% |
| !!! | TTGGTATTTTTCTCTTTTAA+GGG | + | chr5_3:66732808-66732827 | Msa0826400:intron | 20.0% |
| !! | TCTGTATAGAATATGTAATT+TGG | - | chr5_3:66732918-66732937 | None:intergenic | 20.0% |
| !! | AAATTACATATTCTATACAG+AGG | + | chr5_3:66732917-66732936 | Msa0826400:intron | 20.0% |
| !! | AATTACATATTCTATACAGA+GGG | + | chr5_3:66732918-66732937 | Msa0826400:intron | 20.0% |
| !!! | TTGTGTATTATTTTTTGTAG+AGG | + | chr5_3:66733011-66733030 | Msa0826400:intron | 20.0% |
| !! | TTAAGTGTTAAATACAGATT+CGG | - | chr5_3:66733197-66733216 | None:intergenic | 20.0% |
| !! | ATATACTTTAAATAGCTGAA+AGG | - | chr5_3:66734273-66734292 | None:intergenic | 20.0% |
| !!! | ATTTTTTCTCATGATATATC+AGG | + | chr5_3:66734794-66734813 | Msa0826400:intron | 20.0% |
| !!! | TTTTTATCAGAGTAATGAAT+TGG | + | chr5_3:66734850-66734869 | Msa0826400:CDS | 20.0% |
| !! | CAAAAAAATCCTTGTTAAAT+AGG | - | chr5_3:66735807-66735826 | None:intergenic | 20.0% |
| !! | CTGTTTGAAAATTTAAATGT+TGG | + | chr5_3:66736064-66736083 | Msa0826400:intron | 20.0% |
| !!! | TCTAACATTTTTCCAAAATT+TGG | + | chr5_3:66736541-66736560 | Msa0826400:intron | 20.0% |
| !!! | TTTGGATTTTGATTAGTATT+TGG | + | chr5_3:66736732-66736751 | Msa0826400:intron | 20.0% |
| !! | ATAATTATACAAGAAAACGA+GGG | - | chr5_3:66736821-66736840 | None:intergenic | 20.0% |
| !! | AATAATTATACAAGAAAACG+AGG | - | chr5_3:66736822-66736841 | None:intergenic | 20.0% |
| !! | CAAATAAAACCATTATGTTA+AGG | - | chr5_3:66737173-66737192 | None:intergenic | 20.0% |
| !! | CAAACAATTTAAATAAGTCA+AGG | - | chr5_3:66737590-66737609 | None:intergenic | 20.0% |
| !! | ATTAAGTAAAATTAGTACAC+AGG | - | chr5_3:66738056-66738075 | None:intergenic | 20.0% |
| !! | TAATAAATAAAACTAACGAG+GGG | - | chr5_3:66738141-66738160 | None:intergenic | 20.0% |
| !!! | AATTTCCAATTTTGTTTTCT+TGG | + | chr5_3:66738184-66738203 | Msa0826400:intron | 20.0% |
| !! | TACAATAGAGATATATAGTA+GGG | - | chr5_3:66738683-66738702 | None:intergenic | 20.0% |
| !! | TTACAATAGAGATATATAGT+AGG | - | chr5_3:66738684-66738703 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACAGAAGTTGT+CGG | - | chr5_3:66738746-66738765 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGGTGTTTGTT+AGG | + | chr5_3:66738768-66738787 | Msa0826400:intron | 20.0% |
| !!! | TTTTTTTTTGGTGTTTGTTA+GGG | + | chr5_3:66738769-66738788 | Msa0826400:intron | 20.0% |
| !!! | ATCTAATTATTTTGCAGTTA+TGG | + | chr5_3:66738936-66738955 | Msa0826400:intron | 20.0% |
| !!! | TCTAATTATTTTGCAGTTAT+GGG | + | chr5_3:66738937-66738956 | Msa0826400:intron | 20.0% |
| !! | CTATAACTCAATATTATATC+AGG | - | chr5_3:66739032-66739051 | None:intergenic | 20.0% |
| ! | AAGAAGAAGATGAAGATTTA+GGG | - | chr5_3:66732155-66732174 | None:intergenic | 25.0% |
| ! | TCTTCAATTTCATCTTTAGA+AGG | - | chr5_3:66732323-66732342 | None:intergenic | 25.0% |
| ! | AGTTTCAATTATGAATGAAG+AGG | - | chr5_3:66732389-66732408 | None:intergenic | 25.0% |
| ! | TGTGAGTAGTCAATAAAATT+TGG | + | chr5_3:66732735-66732754 | Msa0826400:intron | 25.0% |
| ! | GTGAGTAGTCAATAAAATTT+GGG | + | chr5_3:66732736-66732755 | Msa0826400:intron | 25.0% |
| !! | GTTGGTATTTTTCTCTTTTA+AGG | + | chr5_3:66732807-66732826 | Msa0826400:intron | 25.0% |
| !! | TTTGGTATTATTTCTTGTCA+GGG | - | chr5_3:66732900-66732919 | None:intergenic | 25.0% |
| !! | ATTTGGTATTATTTCTTGTC+AGG | - | chr5_3:66732901-66732920 | None:intergenic | 25.0% |
| ! | ATTTGTCCCCAATATAAAAA+TGG | + | chr5_3:66732977-66732996 | Msa0826400:intron | 25.0% |
| !!! | TCTCTACCATTTTTATATTG+GGG | - | chr5_3:66732986-66733005 | None:intergenic | 25.0% |
| !!! | GTCTCTACCATTTTTATATT+GGG | - | chr5_3:66732987-66733006 | None:intergenic | 25.0% |
| !!! | AGTCTCTACCATTTTTATAT+TGG | - | chr5_3:66732988-66733007 | None:intergenic | 25.0% |
| !!! | TTTTTTGTAGAGGACTAAAT+TGG | + | chr5_3:66733021-66733040 | Msa0826400:intron | 25.0% |
| !! | TTTTTGTAGAGGACTAAATT+GGG | + | chr5_3:66733022-66733041 | Msa0826400:intron | 25.0% |
| !!! | AATATCATCACTTTTTCCAT+TGG | - | chr5_3:66733367-66733386 | None:intergenic | 25.0% |
| ! | CAATTAGATTCCACATTATT+TGG | - | chr5_3:66733898-66733917 | None:intergenic | 25.0% |
| ! | CAAATAATGTGGAATCTAAT+TGG | + | chr5_3:66733896-66733915 | Msa0826400:intron | 25.0% |
| !!! | ACATTTTTTTGTACGACTAA+GGG | - | chr5_3:66734016-66734035 | None:intergenic | 25.0% |
| !!! | TACATTTTTTTGTACGACTA+AGG | - | chr5_3:66734017-66734036 | None:intergenic | 25.0% |
| ! | AAATGTAAAAGAAATGGATG+AGG | - | chr5_3:66734139-66734158 | None:intergenic | 25.0% |
| !! | ATCCATTTCTTTTACATTTG+AGG | + | chr5_3:66734140-66734159 | Msa0826400:intron | 25.0% |
| !! | TCCATTTCTTTTACATTTGA+GGG | + | chr5_3:66734141-66734160 | Msa0826400:intron | 25.0% |
| ! | GTATTCCTGATTATATTCTT+AGG | - | chr5_3:66734190-66734209 | None:intergenic | 25.0% |
| ! | ACTATTTCAATGTAACACAA+TGG | + | chr5_3:66734308-66734327 | Msa0826400:intron | 25.0% |
| ! | TCCATAAGCTACAAATTAAA+CGG | + | chr5_3:66734710-66734729 | Msa0826400:intron | 25.0% |
| ! | GTATAAATATAAGCAGCATA+AGG | - | chr5_3:66734772-66734791 | None:intergenic | 25.0% |
| !! | ACATTTTTATCGTTGATGTA+TGG | - | chr5_3:66734878-66734897 | None:intergenic | 25.0% |
| !! | TTTACTTGATACTTGTTGAT+GGG | + | chr5_3:66735338-66735357 | Msa0826400:intron | 25.0% |
| !! | ACATTTTACTTGCAAAGAAA+TGG | - | chr5_3:66735403-66735422 | None:intergenic | 25.0% |
| ! | TTTCTTTGCAAGTAAAATGT+AGG | + | chr5_3:66735403-66735422 | Msa0826400:intron | 25.0% |
| ! | TTCTTTGCAAGTAAAATGTA+GGG | + | chr5_3:66735404-66735423 | Msa0826400:intron | 25.0% |
| ! | AATAAGAAGACTAATACTTG+AGG | + | chr5_3:66735545-66735564 | Msa0826400:intron | 25.0% |
| ! | AAGATAATAAGATGATGCAA+AGG | - | chr5_3:66735679-66735698 | None:intergenic | 25.0% |
| ! | AATAGTTTCATTATGGTAAC+AGG | + | chr5_3:66735701-66735720 | Msa0826400:intron | 25.0% |
| ! | ATAGTTTCATTATGGTAACA+GGG | + | chr5_3:66735702-66735721 | Msa0826400:intron | 25.0% |
| ! | TTTATACACTTACAACATCA+AGG | - | chr5_3:66735775-66735794 | None:intergenic | 25.0% |
| ! | TCAACCACCATAAAATTATT+TGG | + | chr5_3:66735955-66735974 | Msa0826400:intron | 25.0% |
| !! | GTAACCAAATAATTTTATGG+TGG | - | chr5_3:66735962-66735981 | None:intergenic | 25.0% |
| !! | GAGGTAACCAAATAATTTTA+TGG | - | chr5_3:66735965-66735984 | None:intergenic | 25.0% |
| ! | AGTGTTATAAAAACATAGAC+AGG | - | chr5_3:66736298-66736317 | None:intergenic | 25.0% |
| ! | CTAAAAGCAACTATTTAAGT+AGG | - | chr5_3:66736520-66736539 | None:intergenic | 25.0% |
| !! | TTTTTCCAAAATTTGGATTC+TGG | + | chr5_3:66736548-66736567 | Msa0826400:intron | 25.0% |
| !!! | ATTGATCATCTTTTGACTTT+TGG | + | chr5_3:66736684-66736703 | Msa0826400:intron | 25.0% |
| ! | GAAATCAACAAAATACAAAG+AGG | + | chr5_3:66737049-66737068 | Msa0826400:intron | 25.0% |
| !!! | GAATACAGGTTTGTTAAATT+TGG | + | chr5_3:66737113-66737132 | Msa0826400:intron | 25.0% |
| ! | AAAGTTCTATATTGTTGACA+AGG | + | chr5_3:66737502-66737521 | Msa0826400:intron | 25.0% |
| ! | AATATTGCAAACAAAGTGTA+AGG | - | chr5_3:66737797-66737816 | None:intergenic | 25.0% |
| !! | TTTGAAGTTTAGCTATCTAA+TGG | + | chr5_3:66737884-66737903 | Msa0826400:intron | 25.0% |
| ! | TAGATCCAAGAAAACAAAAT+TGG | - | chr5_3:66738192-66738211 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCTTGGATCTAA+AGG | + | chr5_3:66738193-66738212 | Msa0826400:intron | 25.0% |
| ! | AATGATTTAATTGTCCTGTT+AGG | + | chr5_3:66738231-66738250 | Msa0826400:intron | 25.0% |
| !! | GTTTTACCTGTTACAAATAA+TGG | - | chr5_3:66738588-66738607 | None:intergenic | 25.0% |
| ! | ATTTGTAACAGGTAAAACTT+TGG | + | chr5_3:66738590-66738609 | Msa0826400:intron | 25.0% |
| ! | TTTGTAACAGGTAAAACTTT+GGG | + | chr5_3:66738591-66738610 | Msa0826400:intron | 25.0% |
| ! | ACAATAGAGATATATAGTAG+GGG | - | chr5_3:66738682-66738701 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGTGTTTGTTAG+GGG | + | chr5_3:66738770-66738789 | Msa0826400:intron | 25.0% |
| !!! | TTCAATGTTTTTGGTAGTTT+AGG | + | chr5_3:66739213-66739232 | Msa0826400:three_prime_UTR | 25.0% |
| ! | AAACATGTTAGGAAATATGA+TGG | - | chr5_3:66739284-66739303 | None:intergenic | 25.0% |
| !!! | TATTTCCTAACATGTTTTGA+AGG | + | chr5_3:66739287-66739306 | Msa0826400:three_prime_UTR | 25.0% |
| !!! | ATTTCCTAACATGTTTTGAA+GGG | + | chr5_3:66739288-66739307 | Msa0826400:three_prime_UTR | 25.0% |
| GAAGAAGAAGATGAAGATTT+AGG | - | chr5_3:66732156-66732175 | None:intergenic | 30.0% | |
| ! | TCAATTTCATCTTTAGAAGG+AGG | - | chr5_3:66732320-66732339 | None:intergenic | 30.0% |
| ! | TCTGAAACATCGTTATCAAA+TGG | - | chr5_3:66732465-66732484 | None:intergenic | 30.0% |
| AAAAATAAACCAATCCGAAC+AGG | + | chr5_3:66732691-66732710 | Msa0826400:intron | 30.0% | |
| CTTATAAGATGAAAATGGGT+TGG | + | chr5_3:66732789-66732808 | Msa0826400:intron | 30.0% | |
| !! | ATTTTTCTCTTTTAAGGGAC+TGG | + | chr5_3:66732813-66732832 | Msa0826400:intron | 30.0% |
| TTCTTGTCAGGGAATAAATT+GGG | - | chr5_3:66732889-66732908 | None:intergenic | 30.0% | |
| TTTCTTGTCAGGGAATAAAT+TGG | - | chr5_3:66732890-66732909 | None:intergenic | 30.0% | |
| AAAATTATGAAGGACCAAAC+TGG | + | chr5_3:66733052-66733071 | Msa0826400:intron | 30.0% | |
| AAATTATGAAGGACCAAACT+GGG | + | chr5_3:66733053-66733072 | Msa0826400:intron | 30.0% | |
| ATTATTGCTTATTGCAGTGT+AGG | + | chr5_3:66733252-66733271 | Msa0826400:intron | 30.0% | |
| ATGAGTTAAAGATAGATGGA+TGG | - | chr5_3:66733458-66733477 | None:intergenic | 30.0% | |
| GTGAATGAGTTAAAGATAGA+TGG | - | chr5_3:66733462-66733481 | None:intergenic | 30.0% | |
| TACATGTGTCTATGTAATGT+CGG | - | chr5_3:66733641-66733660 | None:intergenic | 30.0% | |
| TAGACACATGTAGTTACATT+TGG | + | chr5_3:66733649-66733668 | Msa0826400:intron | 30.0% | |
| ! | TTTTCTGATCATGAGTTTAC+TGG | - | chr5_3:66733864-66733883 | None:intergenic | 30.0% |
| ACTACACTTACCAAATAATG+TGG | + | chr5_3:66733885-66733904 | Msa0826400:intron | 30.0% | |
| TAGAATATGAATGCACAACT+TGG | - | chr5_3:66733969-66733988 | None:intergenic | 30.0% | |
| TCCCTCAAATGTAAAAGAAA+TGG | - | chr5_3:66734145-66734164 | None:intergenic | 30.0% | |
| TTCCTGATTATATTCTTAGG+TGG | - | chr5_3:66734187-66734206 | None:intergenic | 30.0% | |
| ! | TGTATAAAAAGCGTAAACAC+TGG | + | chr5_3:66734227-66734246 | Msa0826400:intron | 30.0% |
| AATAGCTGAAAGGTTAATTG+CGG | - | chr5_3:66734263-66734282 | None:intergenic | 30.0% | |
| !! | TGTTTTTCAGTTGCATTAGT+AGG | + | chr5_3:66734414-66734433 | Msa0826400:intron | 30.0% |
| ATTCATAAGGTTTGTAGTGT+TGG | - | chr5_3:66734638-66734657 | None:intergenic | 30.0% | |
| GGAAAAACTATGATAAACCA+AGG | - | chr5_3:66734751-66734770 | None:intergenic | 30.0% | |
| ! | AGGATTTGAGTTATTCAGTT+CGG | + | chr5_3:66734814-66734833 | Msa0826400:intron | 30.0% |
| ATCTTCAATTCATGTTCACA+AGG | - | chr5_3:66735098-66735117 | None:intergenic | 30.0% | |
| AATATACAAGTTCATATCGC+GGG | - | chr5_3:66735223-66735242 | None:intergenic | 30.0% | |
| GAATATACAAGTTCATATCG+CGG | - | chr5_3:66735224-66735243 | None:intergenic | 30.0% | |
| AGTAAAGAACTCATAGGATT+TGG | - | chr5_3:66735324-66735343 | None:intergenic | 30.0% | |
| GTATCAAGTAAAGAACTCAT+AGG | - | chr5_3:66735330-66735349 | None:intergenic | 30.0% | |
| ! | CTTTACTTGATACTTGTTGA+TGG | + | chr5_3:66735337-66735356 | Msa0826400:intron | 30.0% |
| ! | CTGTAATGTTTTATGCAGTT+TGG | + | chr5_3:66735365-66735384 | Msa0826400:intron | 30.0% |
| ! | AACATGAACTGTCATGTTTT+TGG | - | chr5_3:66735485-66735504 | None:intergenic | 30.0% |
| AAAAGGAAAAAGGGGAAAAA+TGG | + | chr5_3:66735901-66735920 | Msa0826400:CDS | 30.0% | |
| AAAGGAAAAAGGGGAAAAAT+GGG | + | chr5_3:66735902-66735921 | Msa0826400:CDS | 30.0% | |
| AAGTTGGAACCAAATAATGT+GGG | - | chr5_3:66736148-66736167 | None:intergenic | 30.0% | |
| !! | GTCTTTTTCACTCTCAAATA+AGG | + | chr5_3:66736345-66736364 | Msa0826400:intron | 30.0% |
| ! | AGAATCCAGAATCCAAATTT+TGG | - | chr5_3:66736556-66736575 | None:intergenic | 30.0% |
| ACAATAGAGCAAAATGTACT+TGG | - | chr5_3:66736635-66736654 | None:intergenic | 30.0% | |
| ! | TACATTTTGCTCTATTGTCA+GGG | + | chr5_3:66736637-66736656 | Msa0826400:intron | 30.0% |
| !!! | GGATTTTGATTAGTATTTGG+TGG | + | chr5_3:66736735-66736754 | Msa0826400:intron | 30.0% |
| CTAGATTTACCAACAACAAA+TGG | + | chr5_3:66736890-66736909 | Msa0826400:intron | 30.0% | |
| !! | AAGAGATTTCCATTTGTTGT+TGG | - | chr5_3:66736902-66736921 | None:intergenic | 30.0% |
| !! | TGCTGATTCTGTAATTTGTT+TGG | + | chr5_3:66737021-66737040 | Msa0826400:intron | 30.0% |
| CTATGCTTTCCTTAACATAA+TGG | + | chr5_3:66737161-66737180 | Msa0826400:intron | 30.0% | |
| ! | TGGAAAGTGTACTATTACAA+TGG | + | chr5_3:66737312-66737331 | Msa0826400:CDS | 30.0% |
| CAATTTAAATAAGTCAAGGG+CGG | - | chr5_3:66737586-66737605 | None:intergenic | 30.0% | |
| GAAAAATTGGATCATTACCA+AGG | - | chr5_3:66737728-66737747 | None:intergenic | 30.0% | |
| ! | TCCAATTTTTCCTTGTTACT+TGG | + | chr5_3:66737737-66737756 | Msa0826400:intron | 30.0% |
| GTGTTAATAAACTTTGCAGA+AGG | + | chr5_3:66737912-66737931 | Msa0826400:intron | 30.0% | |
| ATTATAGGATACAGAGGTAA+CGG | - | chr5_3:66738362-66738381 | None:intergenic | 30.0% | |
| TACCTCTGTATCCTATAATA+CGG | + | chr5_3:66738363-66738382 | Msa0826400:CDS | 30.0% | |
| GTGTTGAAGATACATACATT+AGG | - | chr5_3:66738394-66738413 | None:intergenic | 30.0% | |
| TTACTGCCATTATTTGTAAC+AGG | + | chr5_3:66738579-66738598 | Msa0826400:intron | 30.0% | |
| ! | AAGAAAAAACTGACAGCTTT+TGG | - | chr5_3:66738658-66738677 | None:intergenic | 30.0% |
| !!! | TTTTTTTGGTGTTTGTTAGG+GGG | + | chr5_3:66738771-66738790 | Msa0826400:intron | 30.0% |
| TTAAGAATACCTGAAGTCAA+AGG | - | chr5_3:66738892-66738911 | None:intergenic | 30.0% | |
| ! | GTAATGAGCTTCAATGTTTT+TGG | + | chr5_3:66739204-66739223 | Msa0826400:three_prime_UTR | 30.0% |
| ! | GCTTCAATGATATACAGTTT+TGG | + | chr5_3:66739250-66739269 | Msa0826400:three_prime_UTR | 30.0% |
| AAAAAACAACTACAACGGTT+GGG | - | chr5_3:66739325-66739344 | None:intergenic | 30.0% | |
| TGAGGAAAAAACAACTACAA+CGG | - | chr5_3:66739330-66739349 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTTCCTCACTAAA+AGG | + | chr5_3:66739335-66739354 | Msa0826400:three_prime_UTR | 30.0% |
| ! | AAACTCTTAACCTTTTAGTG+AGG | - | chr5_3:66739348-66739367 | None:intergenic | 30.0% |
| TAACTCTGTTGTACACGATA+CGG | - | chr5_3:66732235-66732254 | None:intergenic | 35.0% | |
| !! | AAATTGTGACGGACCATAAT+GGG | - | chr5_3:66732858-66732877 | None:intergenic | 35.0% |
| !! | TAAATTGTGACGGACCATAA+TGG | - | chr5_3:66732859-66732878 | None:intergenic | 35.0% |
| ! | GGTCCTTCATAATTTTCTTG+TGG | - | chr5_3:66733048-66733067 | None:intergenic | 35.0% |
| ! | AAGAGCTTTTGAGCAGAAAA+TGG | - | chr5_3:66733112-66733131 | None:intergenic | 35.0% |
| AAGCTCTTCACTTAAAGTCT+TGG | + | chr5_3:66733124-66733143 | Msa0826400:intron | 35.0% | |
| AGCTCTTCACTTAAAGTCTT+GGG | + | chr5_3:66733125-66733144 | Msa0826400:intron | 35.0% | |
| ATACATGAAAAGGATGGCAA+TGG | - | chr5_3:66733173-66733192 | None:intergenic | 35.0% | |
| TTCGGAATACATGAAAAGGA+TGG | - | chr5_3:66733179-66733198 | None:intergenic | 35.0% | |
| CAGATTCGGAATACATGAAA+AGG | - | chr5_3:66733183-66733202 | None:intergenic | 35.0% | |
| !!! | TCATCACTTTTTCCATTGGA+TGG | - | chr5_3:66733363-66733382 | None:intergenic | 35.0% |
| CATGGATAACTATGATGAAG+AGG | + | chr5_3:66733410-66733429 | Msa0826400:CDS | 35.0% | |
| TATGATGAAGAGGATGACAA+AGG | + | chr5_3:66733420-66733439 | Msa0826400:CDS | 35.0% | |
| ! | AAAGTTTTGCACCTAAACCA+AGG | - | chr5_3:66733771-66733790 | None:intergenic | 35.0% |
| !!! | GGTGCAAAACTTTTTTCTGA+TGG | + | chr5_3:66733778-66733797 | Msa0826400:intron | 35.0% |
| CTGTAATGTAATACCAAACC+TGG | + | chr5_3:66733801-66733820 | Msa0826400:intron | 35.0% | |
| GTGGAATCTAATTGGTAAAG+AGG | + | chr5_3:66733904-66733923 | Msa0826400:intron | 35.0% | |
| TGCCACCTAAGAATATAATC+AGG | + | chr5_3:66734182-66734201 | Msa0826400:intron | 35.0% | |
| ! | TAAAAAGCGTAAACACTGGT+AGG | + | chr5_3:66734231-66734250 | Msa0826400:intron | 35.0% |
| !! | GCCGTTTAATTTGTAGCTTA+TGG | - | chr5_3:66734714-66734733 | None:intergenic | 35.0% |
| ATTAAACGGCTTATCCAAAC+AGG | + | chr5_3:66734724-66734743 | Msa0826400:intron | 35.0% | |
| TTAAACGGCTTATCCAAACA+GGG | + | chr5_3:66734725-66734744 | Msa0826400:intron | 35.0% | |
| ! | GGATTTGAGTTATTCAGTTC+GGG | + | chr5_3:66734815-66734834 | Msa0826400:intron | 35.0% |
| ! | GATTTGAGTTATTCAGTTCG+GGG | + | chr5_3:66734816-66734835 | Msa0826400:CDS | 35.0% |
| TAACAAAACCATGCAAGTGT+TGG | - | chr5_3:66734911-66734930 | None:intergenic | 35.0% | |
| !!! | ACACTTGCATGGTTTTGTTA+AGG | + | chr5_3:66734911-66734930 | Msa0826400:intron | 35.0% |
| ! | GGAGTATGATTCTGAAGATA+TGG | + | chr5_3:66734984-66735003 | Msa0826400:CDS | 35.0% |
| CAAACAACAACAGAATCAGT+TGG | - | chr5_3:66735027-66735046 | None:intergenic | 35.0% | |
| TATTACATGTTTATCTGCCC+TGG | + | chr5_3:66735169-66735188 | Msa0826400:intron | 35.0% | |
| TCACCATGATATCATCATTC+CGG | + | chr5_3:66735242-66735261 | Msa0826400:CDS | 35.0% | |
| ATTCCGGAATGATGATATCA+TGG | - | chr5_3:66735248-66735267 | None:intergenic | 35.0% | |
| ! | ACCTTTTTCTCCTCCTTTAA+GGG | - | chr5_3:66735301-66735320 | None:intergenic | 35.0% |
| ATCAAGGTCCCAAATTTCAA+TGG | - | chr5_3:66735759-66735778 | None:intergenic | 35.0% | |
| TGTTGTTGCCCTATTTAACA+AGG | + | chr5_3:66735795-66735814 | Msa0826400:intron | 35.0% | |
| ! | CTTTTGTTCTCAGATTGATG+AGG | + | chr5_3:66735846-66735865 | Msa0826400:intron | 35.0% |
| TGGCAAAGAGAAAAGGAAAA+AGG | + | chr5_3:66735891-66735910 | Msa0826400:CDS | 35.0% | |
| GGCAAAGAGAAAAGGAAAAA+GGG | + | chr5_3:66735892-66735911 | Msa0826400:CDS | 35.0% | |
| GCAAAGAGAAAAGGAAAAAG+GGG | + | chr5_3:66735893-66735912 | Msa0826400:CDS | 35.0% | |
| AAAGGGGAAAAATGGGAAAA+AGG | + | chr5_3:66735909-66735928 | Msa0826400:CDS | 35.0% | |
| GGAACTCAAAAAATGGGAAA+AGG | - | chr5_3:66736125-66736144 | None:intergenic | 35.0% | |
| AGTTGGAACCAAATAATGTG+GGG | - | chr5_3:66736147-66736166 | None:intergenic | 35.0% | |
| GAAGTTGGAACCAAATAATG+TGG | - | chr5_3:66736149-66736168 | None:intergenic | 35.0% | |
| TACTCCTTCAACTTGAATGT+GGG | + | chr5_3:66736176-66736195 | Msa0826400:intron | 35.0% | |
| ACAAAATCACCGTAATGTGA+GGG | + | chr5_3:66736218-66736237 | Msa0826400:intron | 35.0% | |
| ! | TTTTGTGTTCCCTCACATTA+CGG | - | chr5_3:66736230-66736249 | None:intergenic | 35.0% |
| AGGGAACACAAAAACTGTAT+TGG | + | chr5_3:66736237-66736256 | Msa0826400:intron | 35.0% | |
| GAACACAAAAACTGTATTGG+AGG | + | chr5_3:66736240-66736259 | Msa0826400:intron | 35.0% | |
| AAACCATTAGGCTCCATTTA+GGG | - | chr5_3:66736428-66736447 | None:intergenic | 35.0% | |
| TAGTATGCAGCTACTCAATA+TGG | - | chr5_3:66736469-66736488 | None:intergenic | 35.0% | |
| !! | CATATCTACCTTCTAGTTTG+TGG | + | chr5_3:66736584-66736603 | Msa0826400:intron | 35.0% |
| AATACCATCCACAAACTAGA+AGG | - | chr5_3:66736595-66736614 | None:intergenic | 35.0% | |
| ! | GTACATTTTGCTCTATTGTC+AGG | + | chr5_3:66736636-66736655 | Msa0826400:intron | 35.0% |
| ! | TGTTGTTGGTAAATCTAGCT+TGG | - | chr5_3:66736888-66736907 | None:intergenic | 35.0% |
| CAAATTACAGAATCAGCAAG+AGG | - | chr5_3:66737019-66737038 | None:intergenic | 35.0% | |
| GTCAAACTCAAAAGATGTCA+AGG | - | chr5_3:66737214-66737233 | None:intergenic | 35.0% | |
| AATGGATCATCACTCTGATA+AGG | + | chr5_3:66737330-66737349 | Msa0826400:CDS | 35.0% | |
| ! | ATGTGGATTGAAAGACATCA+TGG | - | chr5_3:66737625-66737644 | None:intergenic | 35.0% |
| GCCAAGTAACAAGGAAAAAT+TGG | - | chr5_3:66737741-66737760 | None:intergenic | 35.0% | |
| TGTAGAAAAGCCAAGTAACA+AGG | - | chr5_3:66737750-66737769 | None:intergenic | 35.0% | |
| AAACTTTGCAGAAGGATGTA+AGG | + | chr5_3:66737920-66737939 | Msa0826400:intron | 35.0% | |
| !!! | CGATCCAATGTTTTGATGTT+CGG | + | chr5_3:66738272-66738291 | Msa0826400:CDS | 35.0% |
| GACTGGATCTATGGATAAAA+CGG | + | chr5_3:66738490-66738509 | Msa0826400:CDS | 35.0% | |
| TCTTTAGATGCAACAGAAGA+TGG | - | chr5_3:66738634-66738653 | None:intergenic | 35.0% | |
| GAAAATACGGGAAATTCAAC+AGG | + | chr5_3:66738987-66739006 | Msa0826400:CDS | 35.0% | |
| AGTCCAAACATTGTCTTCAT+GGG | - | chr5_3:66739072-66739091 | None:intergenic | 35.0% | |
| AAGTCCAAACATTGTCTTCA+TGG | - | chr5_3:66739073-66739092 | None:intergenic | 35.0% | |
| TACTCAACTGTGAACAAGTT+GGG | + | chr5_3:66739098-66739117 | Msa0826400:three_prime_UTR | 35.0% | |
| ! | ATAAGACTTGCATTTTGCAG+AGG | - | chr5_3:66739148-66739167 | None:intergenic | 35.0% |
| GAAAAAACAACTACAACGGT+TGG | - | chr5_3:66739326-66739345 | None:intergenic | 35.0% | |
| GAAGGGTAATCTCATTACAA+TGG | - | chr5_3:66739469-66739488 | None:intergenic | 35.0% | |
| TGCTCATCACACAAAAAGAA+GGG | - | chr5_3:66739486-66739505 | None:intergenic | 35.0% | |
| TTGCTCATCACACAAAAAGA+AGG | - | chr5_3:66739487-66739506 | None:intergenic | 35.0% | |
| TTATGATTGCCGCAATTTCG+TGG | + | chr5_3:66732252-66732271 | Msa0826400:exon | 40.0% | |
| TTTCGGAATCCACGAAATTG+CGG | - | chr5_3:66732264-66732283 | None:intergenic | 40.0% | |
| CAATTTCGTGGATTCCGAAA+GGG | + | chr5_3:66732264-66732283 | Msa0826400:CDS | 40.0% | |
| AATTTCGTGGATTCCGAAAG+GGG | + | chr5_3:66732265-66732284 | Msa0826400:CDS | 40.0% | |
| AGAAGGAGGTTCAGCAAAAA+CGG | - | chr5_3:66732306-66732325 | None:intergenic | 40.0% | |
| !!! | CTTTTAAGGGACTGGCTTAT+TGG | + | chr5_3:66732821-66732840 | Msa0826400:intron | 40.0% |
| GGGCCACAAGAAAATTATGA+AGG | + | chr5_3:66733042-66733061 | Msa0826400:intron | 40.0% | |
| TAAAGTCTTGGGTGAAGAGA+TGG | + | chr5_3:66733136-66733155 | Msa0826400:intron | 40.0% | |
| TTTACCAATTGCACCAGCTA+CGG | - | chr5_3:66733340-66733359 | None:intergenic | 40.0% | |
| GCAATTGGTAAACCATCCAA+TGG | + | chr5_3:66733348-66733367 | Msa0826400:CDS | 40.0% | |
| ATCCATGTTGAGATCCTTCA+AGG | - | chr5_3:66733397-66733416 | None:intergenic | 40.0% | |
| TACCTAACTATGTACTCTGC+CGG | + | chr5_3:66733483-66733502 | Msa0826400:intron | 40.0% | |
| ATTACGCCACTGGATAAAAC+CGG | - | chr5_3:66733505-66733524 | None:intergenic | 40.0% | |
| TAATCACTTGTGAGGCTGTT+TGG | + | chr5_3:66733521-66733540 | Msa0826400:intron | 40.0% | |
| GTTTATGAGTTCAGCTACCT+TGG | + | chr5_3:66733751-66733770 | Msa0826400:intron | 40.0% | |
| TATGTGTAGTATCACATGCC+AGG | - | chr5_3:66733822-66733841 | None:intergenic | 40.0% | |
| ! | TTTTGTACGACTAAGGGTCA+AGG | - | chr5_3:66734010-66734029 | None:intergenic | 40.0% |
| ! | CATAAGGTTTGTAGTGTTGG+AGG | - | chr5_3:66734635-66734654 | None:intergenic | 40.0% |
| GATAAGTTCCAACACTTGCA+TGG | + | chr5_3:66734900-66734919 | Msa0826400:intron | 40.0% | |
| AATTTCCACTTTGCACAGCA+TGG | + | chr5_3:66735265-66735284 | Msa0826400:CDS | 40.0% | |
| !! | CTTTTTCTCCTCCTTTAAGG+GGG | - | chr5_3:66735299-66735318 | None:intergenic | 40.0% |
| ! | CCTTTTTCTCCTCCTTTAAG+GGG | - | chr5_3:66735300-66735319 | None:intergenic | 40.0% |
| ! | GACCTTTTTCTCCTCCTTTA+AGG | - | chr5_3:66735302-66735321 | None:intergenic | 40.0% |
| TATGGTAACAGGGAACTTCT+TGG | + | chr5_3:66735712-66735731 | Msa0826400:intron | 40.0% | |
| !! | TTCTTGGCTGTTGGTTCAAT+GGG | + | chr5_3:66735728-66735747 | Msa0826400:CDS | 40.0% |
| TGGGACCATCCATTGAAATT+TGG | + | chr5_3:66735747-66735766 | Msa0826400:CDS | 40.0% | |
| GGGACCATCCATTGAAATTT+GGG | + | chr5_3:66735748-66735767 | Msa0826400:CDS | 40.0% | |
| AGGTCCCAAATTTCAATGGA+TGG | - | chr5_3:66735755-66735774 | None:intergenic | 40.0% | |
| ! | TTTGGTTACCTCTTTTGCTC+TGG | + | chr5_3:66735973-66735992 | Msa0826400:intron | 40.0% |
| !! | ACATGTGCTGTTCTTTTGTG+TGG | + | chr5_3:66736035-66736054 | Msa0826400:intron | 40.0% |
| TGTTGGTCGTCTATAACTGT+TGG | + | chr5_3:66736081-66736100 | Msa0826400:intron | 40.0% | |
| GTTGGTCGTCTATAACTGTT+GGG | + | chr5_3:66736082-66736101 | Msa0826400:intron | 40.0% | |
| TGTGGGGGAACTCAAAAAAT+GGG | - | chr5_3:66736131-66736150 | None:intergenic | 40.0% | |
| ATGTGGGGGAACTCAAAAAA+TGG | - | chr5_3:66736132-66736151 | None:intergenic | 40.0% | |
| TTGAGTTCCCCCACATTATT+TGG | + | chr5_3:66736136-66736155 | Msa0826400:intron | 40.0% | |
| GTTGGAACCAAATAATGTGG+GGG | - | chr5_3:66736146-66736165 | None:intergenic | 40.0% | |
| GTACTCCTTCAACTTGAATG+TGG | + | chr5_3:66736175-66736194 | Msa0826400:intron | 40.0% | |
| ACTCCTTCAACTTGAATGTG+GGG | + | chr5_3:66736177-66736196 | Msa0826400:intron | 40.0% | |
| !! | AAACCCCACATTCAAGTTGA+AGG | - | chr5_3:66736183-66736202 | None:intergenic | 40.0% |
| CACAAAATCACCGTAATGTG+AGG | + | chr5_3:66736217-66736236 | Msa0826400:intron | 40.0% | |
| CACAAAAACTGTATTGGAGG+AGG | + | chr5_3:66736243-66736262 | Msa0826400:intron | 40.0% | |
| ACTGTATTGGAGGAGGATTT+AGG | + | chr5_3:66736250-66736269 | Msa0826400:intron | 40.0% | |
| AACCATTAGGCTCCATTTAG+GGG | - | chr5_3:66736427-66736446 | None:intergenic | 40.0% | |
| CAAACCATTAGGCTCCATTT+AGG | - | chr5_3:66736429-66736448 | None:intergenic | 40.0% | |
| CTAAATGGAGCCTAATGGTT+TGG | + | chr5_3:66736427-66736446 | Msa0826400:intron | 40.0% | |
| !! | TCTACCTTCTAGTTTGTGGA+TGG | + | chr5_3:66736588-66736607 | Msa0826400:intron | 40.0% |
| TGTACTTGGACTTGAGTGAA+TGG | - | chr5_3:66736621-66736640 | None:intergenic | 40.0% | |
| AGTGAAGACTTATCGAGTCA+GGG | - | chr5_3:66736663-66736682 | None:intergenic | 40.0% | |
| ATAGATGCCATATGCATGTG+AGG | + | chr5_3:66736768-66736787 | Msa0826400:intron | 40.0% | |
| TAGATGCCATATGCATGTGA+GGG | + | chr5_3:66736769-66736788 | Msa0826400:intron | 40.0% | |
| ! | GTTGGTAAATCTAGCTTGGA+AGG | - | chr5_3:66736884-66736903 | None:intergenic | 40.0% |
| TTGCTTGGAACAAGGAATAC+AGG | + | chr5_3:66737099-66737118 | Msa0826400:CDS | 40.0% | |
| TGACAAGCGAGTGAAGATTT+GGG | + | chr5_3:66737279-66737298 | Msa0826400:CDS | 40.0% | |
| ! | AAGATTTGGGATGTTGTTGC+TGG | + | chr5_3:66737292-66737311 | Msa0826400:CDS | 40.0% |
| GGATTGAAAGACATCATGGA+AGG | - | chr5_3:66737621-66737640 | None:intergenic | 40.0% | |
| TTCAATCCACATATCCTCAC+AGG | + | chr5_3:66737633-66737652 | Msa0826400:intron | 40.0% | |
| GATCAAACGAACCACTAAGA+AGG | - | chr5_3:66737696-66737715 | None:intergenic | 40.0% | |
| GTTTGATCATACTGTTGCCT+TGG | + | chr5_3:66737708-66737727 | Msa0826400:CDS | 40.0% | |
| !! | GTGCGTTATGGTTATTTCTG+AGG | + | chr5_3:66738030-66738049 | Msa0826400:intron | 40.0% |
| ATCTTCAAGACTCACCTAAC+AGG | - | chr5_3:66738248-66738267 | None:intergenic | 40.0% | |
| TGTTAGGTGAGTCTTGAAGA+TGG | + | chr5_3:66738247-66738266 | Msa0826400:intron | 40.0% | |
| CAGTCCGAACATCAAAACAT+TGG | - | chr5_3:66738279-66738298 | None:intergenic | 40.0% | |
| TGCCGTATTATAGGATACAG+AGG | - | chr5_3:66738368-66738387 | None:intergenic | 40.0% | |
| ! | ATTAGGTGCTGCCGTATTAT+AGG | - | chr5_3:66738377-66738396 | None:intergenic | 40.0% |
| TTAACCCTACCCTATTGACA+TGG | + | chr5_3:66738449-66738468 | Msa0826400:intron | 40.0% | |
| TGCATGACACCATGTCAATA+GGG | - | chr5_3:66738461-66738480 | None:intergenic | 40.0% | |
| TAGATGCAACAGAAGATGGT+TGG | - | chr5_3:66738630-66738649 | None:intergenic | 40.0% | |
| ! | CTTTTCTATCTCCTTCTCAG+AGG | + | chr5_3:66738798-66738817 | Msa0826400:CDS | 40.0% |
| ! | AACCCATTCTTGTTGGCTAT+TGG | + | chr5_3:66738823-66738842 | Msa0826400:CDS | 40.0% |
| CTCCAATAGCCAACAAGAAT+GGG | - | chr5_3:66738828-66738847 | None:intergenic | 40.0% | |
| AGAGATGCCTTCATCAGATA+AGG | - | chr5_3:66738966-66738985 | None:intergenic | 40.0% | |
| !! | GAAGGCATCTCTCGAAAATA+CGG | + | chr5_3:66738974-66738993 | Msa0826400:CDS | 40.0% |
| ! | AAGGCATCTCTCGAAAATAC+GGG | + | chr5_3:66738975-66738994 | Msa0826400:CDS | 40.0% |
| AACAGGAATCAACCTCAATC+CGG | + | chr5_3:66739004-66739023 | Msa0826400:CDS | 40.0% | |
| CTCAATATTATATCAGGCCC+CGG | - | chr5_3:66739026-66739045 | None:intergenic | 40.0% | |
| AAACATTGTCTTCATGGGCA+GGG | - | chr5_3:66739067-66739086 | None:intergenic | 40.0% | |
| CTACTCAACTGTGAACAAGT+TGG | + | chr5_3:66739097-66739116 | Msa0826400:three_prime_UTR | 40.0% | |
| ! | GGTTGCATGTTCCAACATTT+TGG | + | chr5_3:66739119-66739138 | Msa0826400:three_prime_UTR | 40.0% |
| TGCAGAGGATTCCAAAATGT+TGG | - | chr5_3:66739133-66739152 | None:intergenic | 40.0% | |
| AAGGCCCTTCAAAACATGTT+AGG | - | chr5_3:66739295-66739314 | None:intergenic | 40.0% | |
| GCAATTTCGTGGATTCCGAA+AGG | + | chr5_3:66732263-66732282 | Msa0826400:CDS | 45.0% | |
| TCTGCTTTCGAAACCCCTTT+CGG | - | chr5_3:66732281-66732300 | None:intergenic | 45.0% | |
| GAAGGAGGTTCAGCAAAAAC+GGG | - | chr5_3:66732305-66732324 | None:intergenic | 45.0% | |
| TCATCTCCAACACTCTCACT+AGG | + | chr5_3:66732345-66732364 | Msa0826400:CDS | 45.0% | |
| ! | GATGTACCTAGTGAGAGTGT+TGG | - | chr5_3:66732354-66732373 | None:intergenic | 45.0% |
| CAAGTGATTAACGGCCTGTT+CGG | - | chr5_3:66732708-66732727 | None:intergenic | 45.0% | |
| GGTTGAGTGAAGACCCATTA+TGG | + | chr5_3:66732842-66732861 | Msa0826400:intron | 45.0% | |
| GGGTCGAGAGTAAATTGTGA+CGG | - | chr5_3:66732869-66732888 | None:intergenic | 45.0% | |
| TCCCTGACAGATTACATCAG+AGG | + | chr5_3:66732949-66732968 | Msa0826400:intron | 45.0% | |
| CCCTCTGATGTAATCTGTCA+GGG | - | chr5_3:66732953-66732972 | None:intergenic | 45.0% | |
| CCCTGACAGATTACATCAGA+GGG | + | chr5_3:66732950-66732969 | Msa0826400:intron | 45.0% | |
| TCCCTCTGATGTAATCTGTC+AGG | - | chr5_3:66732954-66732973 | None:intergenic | 45.0% | |
| CTAAGAGTGAAGACCCAGTT+TGG | - | chr5_3:66733069-66733088 | None:intergenic | 45.0% | |
| TTAACCGTAGCTGGTGCAAT+TGG | + | chr5_3:66733333-66733352 | Msa0826400:CDS | 45.0% | |
| TGATATTACCGACGCCTTGA+AGG | + | chr5_3:66733380-66733399 | Msa0826400:CDS | 45.0% | |
| AACCGGCAGAGTACATAGTT+AGG | - | chr5_3:66733488-66733507 | None:intergenic | 45.0% | |
| GAGTTCAGCTACCTTGGTTT+AGG | + | chr5_3:66733757-66733776 | Msa0826400:intron | 45.0% | |
| GTAGTATCACATGCCAGGTT+TGG | - | chr5_3:66733817-66733836 | None:intergenic | 45.0% | |
| AAGGGTCAAGGTTCTGTTCT+AGG | - | chr5_3:66733998-66734017 | None:intergenic | 45.0% | |
| TGATAAACCAAGGCCCTGTT+TGG | - | chr5_3:66734741-66734760 | None:intergenic | 45.0% | |
| GAGTTATTCAGTTCGGGGAA+CGG | + | chr5_3:66734821-66734840 | Msa0826400:CDS | 45.0% | |
| TCAAGTATCCATACCTGCCA+GGG | - | chr5_3:66735189-66735208 | None:intergenic | 45.0% | |
| CAAGTTCATATCGCGGGTAT+TGG | - | chr5_3:66735217-66735236 | None:intergenic | 45.0% | |
| GCTGTGCAAAGTGGAAATTC+CGG | - | chr5_3:66735264-66735283 | None:intergenic | 45.0% | |
| CCCCTTAAAGGAGGAGAAAA+AGG | + | chr5_3:66735297-66735316 | Msa0826400:CDS | 45.0% | |
| !! | ATGATGCAAAGGCATCAAGC+AGG | - | chr5_3:66735668-66735687 | None:intergenic | 45.0% |
| !! | CTTCTTGGCTGTTGGTTCAA+TGG | + | chr5_3:66735727-66735746 | Msa0826400:CDS | 45.0% |
| TGTTGGGTGGCAAAGAGAAA+AGG | + | chr5_3:66735884-66735903 | Msa0826400:CDS | 45.0% | |
| ! | AAGGAGTACGACTTGGAAGT+TGG | - | chr5_3:66736164-66736183 | None:intergenic | 45.0% |
| ! | CAAGTTGAAGGAGTACGACT+TGG | - | chr5_3:66736171-66736190 | None:intergenic | 45.0% |
| GTATTGGAGGAGGATTTAGG+AGG | + | chr5_3:66736253-66736272 | Msa0826400:intron | 45.0% | |
| AACCCCTAAATGGAGCCTAA+TGG | + | chr5_3:66736422-66736441 | Msa0826400:intron | 45.0% | |
| ! | AATGGAGCCTAATGGTTTGG+TGG | + | chr5_3:66736430-66736449 | Msa0826400:intron | 45.0% |
| !! | ATGGAGCCTAATGGTTTGGT+GGG | + | chr5_3:66736431-66736450 | Msa0826400:intron | 45.0% |
| ACACAACCCACCAAACCATT+AGG | - | chr5_3:66736440-66736459 | None:intergenic | 45.0% | |
| !! | TAATGGTTTGGTGGGTTGTG+TGG | + | chr5_3:66736439-66736458 | Msa0826400:intron | 45.0% |
| GAGTGAAGACTTATCGAGTC+AGG | - | chr5_3:66736664-66736683 | None:intergenic | 45.0% | |
| CATTGACCCTCACATGCATA+TGG | - | chr5_3:66736778-66736797 | None:intergenic | 45.0% | |
| TAGCTTGGAAGGCTTCTGTT+GGG | - | chr5_3:66736873-66736892 | None:intergenic | 45.0% | |
| !! | AGCAAGACCAAGTACTGAGT+CGG | - | chr5_3:66737084-66737103 | None:intergenic | 45.0% |
| !! | ACTCAGTACTTGGTCTTGCT+TGG | + | chr5_3:66737084-66737103 | Msa0826400:CDS | 45.0% |
| !! | ACTTGGTCTTGCTTGGAACA+AGG | + | chr5_3:66737091-66737110 | Msa0826400:CDS | 45.0% |
| CTGACAAGCGAGTGAAGATT+TGG | + | chr5_3:66737278-66737297 | Msa0826400:CDS | 45.0% | |
| CTTGAACCTGTGAGGATATG+TGG | - | chr5_3:66737642-66737661 | None:intergenic | 45.0% | |
| GCACAACAGATCCTTCTTAG+TGG | + | chr5_3:66737682-66737701 | Msa0826400:CDS | 45.0% | |
| TGATGTAGAGAGCTTGGCAT+GGG | + | chr5_3:66737981-66738000 | Msa0826400:CDS | 45.0% | |
| !! | ACAAAAGAGTGCTCAGTGTG+TGG | - | chr5_3:66738009-66738028 | None:intergenic | 45.0% |
| ! | ACACACTGAGCACTCTTTTG+TGG | + | chr5_3:66738008-66738027 | Msa0826400:CDS | 45.0% |
| ! | CACTCTTTTGTGGTGCGTTA+TGG | + | chr5_3:66738018-66738037 | Msa0826400:intron | 45.0% |
| ATTCTGCACAGATGTGGCAT+TGG | - | chr5_3:66738308-66738327 | None:intergenic | 45.0% | |
| AGTAGCATTCTGCACAGATG+TGG | - | chr5_3:66738314-66738333 | None:intergenic | 45.0% | |
| GACACCATGTCAATAGGGTA+GGG | - | chr5_3:66738456-66738475 | None:intergenic | 45.0% | |
| TGACACCATGTCAATAGGGT+AGG | - | chr5_3:66738457-66738476 | None:intergenic | 45.0% | |
| CTGCATGACACCATGTCAAT+AGG | - | chr5_3:66738462-66738481 | None:intergenic | 45.0% | |
| ATCTGCAGCATTCGGTATAC+AGG | - | chr5_3:66738543-66738562 | None:intergenic | 45.0% | |
| GTATACCGAATGCTGCAGAT+TGG | + | chr5_3:66738543-66738562 | Msa0826400:intron | 45.0% | |
| GAGTTCCAATCTGCAGCATT+CGG | - | chr5_3:66738551-66738570 | None:intergenic | 45.0% | |
| AGAGGACAACCCATTCTTGT+TGG | + | chr5_3:66738816-66738835 | Msa0826400:CDS | 45.0% | |
| CCTCCAATAGCCAACAAGAA+TGG | - | chr5_3:66738829-66738848 | None:intergenic | 45.0% | |
| ! | CCATTCTTGTTGGCTATTGG+AGG | + | chr5_3:66738826-66738845 | Msa0826400:CDS | 45.0% |
| TTGGCTATTGGAGGCTCAAA+GGG | + | chr5_3:66738835-66738854 | Msa0826400:CDS | 45.0% | |
| ! | AGCAGATGACCTTTGACTTC+AGG | + | chr5_3:66738880-66738899 | Msa0826400:intron | 45.0% |
| TGGGACACCTTATCTGATGA+AGG | + | chr5_3:66738956-66738975 | Msa0826400:CDS | 45.0% | |
| ACAGGAATCAACCTCAATCC+GGG | + | chr5_3:66739005-66739024 | Msa0826400:CDS | 45.0% | |
| CAAACATTGTCTTCATGGGC+AGG | - | chr5_3:66739068-66739087 | None:intergenic | 45.0% | |
| CTGCCCATGAAGACAATGTT+TGG | + | chr5_3:66739066-66739085 | Msa0826400:three_prime_UTR | 45.0% | |
| AACTACAACGGTTGGGCATT+GGG | - | chr5_3:66739318-66739337 | None:intergenic | 45.0% | |
| CCATGCAATGACAAAAGGCA+AGG | - | chr5_3:66739381-66739400 | None:intergenic | 45.0% | |
| ! | CCTTGCCTTTTGTCATTGCA+TGG | + | chr5_3:66739378-66739397 | Msa0826400:three_prime_UTR | 45.0% |
| TCCTGCCATGCAATGACAAA+AGG | - | chr5_3:66739386-66739405 | None:intergenic | 45.0% | |
| TCATTGCATGGCAGGAACAT+CGG | + | chr5_3:66739390-66739409 | Msa0826400:three_prime_UTR | 45.0% | |
| !! | ATATATAAAAAAAATTCATA+AGG | - | chr5_3:66734651-66734670 | None:intergenic | 5.0% |
| !!! | TTTATTTTTTAAAATCTAAA+AGG | - | chr5_3:66736946-66736965 | None:intergenic | 5.0% |
| !! | TCATTATTATTATATTTAAT+AGG | - | chr5_3:66739544-66739563 | None:intergenic | 5.0% |
| TGTACACGATACGGTCAGAG+TGG | - | chr5_3:66732226-66732245 | None:intergenic | 50.0% | |
| GATTAACGGCCTGTTCGGAT+TGG | - | chr5_3:66732703-66732722 | None:intergenic | 50.0% | |
| CGAACAGGCCGTTAATCACT+TGG | + | chr5_3:66732706-66732725 | Msa0826400:intron | 50.0% | |
| CAGCAGCGCCAAGTGATTAA+CGG | - | chr5_3:66732717-66732736 | None:intergenic | 50.0% | |
| GCACATGCTTTAACCGTAGC+TGG | + | chr5_3:66733324-66733343 | Msa0826400:CDS | 50.0% | |
| GTTGAGATCCTTCAAGGCGT+CGG | - | chr5_3:66733391-66733410 | None:intergenic | 50.0% | |
| CGCCTTGAAGGATCTCAACA+TGG | + | chr5_3:66733392-66733411 | Msa0826400:CDS | 50.0% | |
| !!! | ACTCTGCCGGTTTTATCCAG+TGG | + | chr5_3:66733496-66733515 | Msa0826400:intron | 50.0% |
| CTCACAAGTGATTACGCCAC+TGG | - | chr5_3:66733515-66733534 | None:intergenic | 50.0% | |
| CAGTGGCGTAATCACTTGTG+AGG | + | chr5_3:66733513-66733532 | Msa0826400:intron | 50.0% | |
| CTTAGACTTGCAAGCGAAGC+TGG | + | chr5_3:66733938-66733957 | Msa0826400:intron | 50.0% | |
| !! | CCAGAGTGTTGGTAAGGAGA+AGG | - | chr5_3:66734579-66734598 | None:intergenic | 50.0% |
| CCTTCTCCTTACCAACACTC+TGG | + | chr5_3:66734576-66734595 | Msa0826400:intron | 50.0% | |
| !! | GATGGTCCAGAGTGTTGGTA+AGG | - | chr5_3:66734585-66734604 | None:intergenic | 50.0% |
| ! | AAGGTGATGGTCCAGAGTGT+TGG | - | chr5_3:66734590-66734609 | None:intergenic | 50.0% |
| ! | TGTTGTTTGTGCGCGTACTG+AGG | + | chr5_3:66735038-66735057 | Msa0826400:CDS | 50.0% |
| ACATGTTTATCTGCCCTGGC+AGG | + | chr5_3:66735173-66735192 | Msa0826400:intron | 50.0% | |
| TTTATCTGCCCTGGCAGGTA+TGG | + | chr5_3:66735178-66735197 | Msa0826400:intron | 50.0% | |
| CTCAAGTATCCATACCTGCC+AGG | - | chr5_3:66735190-66735209 | None:intergenic | 50.0% | |
| CTGGCAGGTATGGATACTTG+AGG | + | chr5_3:66735188-66735207 | Msa0826400:intron | 50.0% | |
| TCAAGCCATGCTGTGCAAAG+TGG | - | chr5_3:66735273-66735292 | None:intergenic | 50.0% | |
| TGGCTTGATTGCCCCCTTAA+AGG | + | chr5_3:66735285-66735304 | Msa0826400:CDS | 50.0% | |
| CTTGATTGCCCCCTTAAAGG+AGG | + | chr5_3:66735288-66735307 | Msa0826400:CDS | 50.0% | |
| ACAGGGAACTTCTTGGCTGT+TGG | + | chr5_3:66735719-66735738 | Msa0826400:intron | 50.0% | |
| TGATGAGGTAGAGCCATGTG+TGG | + | chr5_3:66735861-66735880 | Msa0826400:CDS | 50.0% | |
| GTAGAGCCATGTGTGGTGTT+GGG | + | chr5_3:66735868-66735887 | Msa0826400:CDS | 50.0% | |
| CAGCGAATCCAGAGCAAAAG+AGG | - | chr5_3:66735984-66736003 | None:intergenic | 50.0% | |
| CTAGCTTGGAAGGCTTCTGT+TGG | - | chr5_3:66736874-66736893 | None:intergenic | 50.0% | |
| !! | AGTCACACCGACTCAGTACT+TGG | + | chr5_3:66737074-66737093 | Msa0826400:CDS | 50.0% |
| AGCAACTGCTTGAACCTGTG+AGG | - | chr5_3:66737650-66737669 | None:intergenic | 50.0% | |
| CACAGGTTCAAGCAGTTGCT+TGG | + | chr5_3:66737650-66737669 | Msa0826400:intron | 50.0% | |
| CACGTATAGCCAGAATGCGA+CGG | - | chr5_3:66737949-66737968 | None:intergenic | 50.0% | |
| ! | GCATTCTGGCTATACGTGGT+CGG | + | chr5_3:66737951-66737970 | Msa0826400:CDS | 50.0% |
| CTGATGTAGAGAGCTTGGCA+TGG | + | chr5_3:66737980-66737999 | Msa0826400:CDS | 50.0% | |
| CTAACGAGGGGAAGTTAGTG+TGG | - | chr5_3:66738129-66738148 | None:intergenic | 50.0% | |
| GCTTCTTGCGACTGGATCTA+TGG | + | chr5_3:66738481-66738500 | Msa0826400:intron | 50.0% | |
| !! | GAATGGGTTGTCCTCTGAGA+AGG | - | chr5_3:66738812-66738831 | None:intergenic | 50.0% |
| GTTGGCTATTGGAGGCTCAA+AGG | + | chr5_3:66738834-66738853 | Msa0826400:CDS | 50.0% | |
| CAGGAATCAACCTCAATCCG+GGG | + | chr5_3:66739006-66739025 | Msa0826400:CDS | 50.0% | |
| TTATATCAGGCCCCGGATTG+AGG | - | chr5_3:66739019-66739038 | None:intergenic | 50.0% | |
| CAACTACAACGGTTGGGCAT+TGG | - | chr5_3:66739319-66739338 | None:intergenic | 50.0% | |
| ! | GCCTTTTGTCATTGCATGGC+AGG | + | chr5_3:66739382-66739401 | Msa0826400:three_prime_UTR | 50.0% |
| ACACGATACGGTCAGAGTGG+TGG | - | chr5_3:66732223-66732242 | None:intergenic | 55.0% | |
| CACTCTGGACCATCACCTTC+TGG | + | chr5_3:66734591-66734610 | Msa0826400:intron | 55.0% | |
| TCTGGACCATCACCTTCTGG+TGG | + | chr5_3:66734594-66734613 | Msa0826400:intron | 55.0% | |
| CTGGACCATCACCTTCTGGT+GGG | + | chr5_3:66734595-66734614 | Msa0826400:intron | 55.0% | |
| TGATGCCCACCAGAAGGTGA+TGG | - | chr5_3:66734603-66734622 | None:intergenic | 55.0% | |
| !! | GAGTACTGATGCCCACCAGA+AGG | - | chr5_3:66734609-66734628 | None:intergenic | 55.0% |
| GGCTTATCCAAACAGGGCCT+TGG | + | chr5_3:66734731-66734750 | Msa0826400:intron | 55.0% | |
| GGTAGAGCCATGTGTGGTGT+TGG | + | chr5_3:66735867-66735886 | Msa0826400:CDS | 55.0% | |
| TTGCCACCCAACACCACACA+TGG | - | chr5_3:66735877-66735896 | None:intergenic | 55.0% | |
| TTTAGGGGTTGCGAGGGGAA+GGG | - | chr5_3:66736412-66736431 | None:intergenic | 55.0% | |
| ATTTAGGGGTTGCGAGGGGA+AGG | - | chr5_3:66736413-66736432 | None:intergenic | 55.0% | |
| TTCCCCTCGCAACCCCTAAA+TGG | + | chr5_3:66736412-66736431 | Msa0826400:intron | 55.0% | |
| CTCCATTTAGGGGTTGCGAG+GGG | - | chr5_3:66736417-66736436 | None:intergenic | 55.0% | |
| GCTCCATTTAGGGGTTGCGA+GGG | - | chr5_3:66736418-66736437 | None:intergenic | 55.0% | |
| ! | CGTCGCATTCTGGCTATACG+TGG | + | chr5_3:66737947-66737966 | Msa0826400:CDS | 55.0% |
| !! | CAGCGCTGATGTAGAGAGCT+TGG | + | chr5_3:66737975-66737994 | Msa0826400:CDS | 55.0% |
| GTCATGCAGCTTCTTGCGAC+TGG | + | chr5_3:66738473-66738492 | Msa0826400:intron | 55.0% | |
| !! | ACAACGGTTGGGCATTGGGA+AGG | - | chr5_3:66739314-66739333 | None:intergenic | 55.0% |
| TTCTTCTTCTCTCGCGCCCC+CGG | + | chr5_3:66732170-66732189 | Msa0826400:five_prime_UTR | 60.0% | |
| ACAATACCGCCGCACCGTTC+CGG | + | chr5_3:66732195-66732214 | Msa0826400:five_prime_UTR | 60.0% | |
| ! | TCAGAGTGGTGGTGCCGGAA+CGG | - | chr5_3:66732212-66732231 | None:intergenic | 60.0% |
| ! | TACGGTCAGAGTGGTGGTGC+CGG | - | chr5_3:66732217-66732236 | None:intergenic | 60.0% |
| ! | GAGCCATGTGTGGTGTTGGG+TGG | + | chr5_3:66735871-66735890 | Msa0826400:CDS | 60.0% |
| !! | AGGGAGGGCTTTGGGAGGAA+GGG | - | chr5_3:66736388-66736407 | None:intergenic | 60.0% |
| !! | AAGGGAGGGCTTTGGGAGGA+AGG | - | chr5_3:66736389-66736408 | None:intergenic | 60.0% |
| GGAAGGGAAGGGAGGGCTTT+GGG | - | chr5_3:66736396-66736415 | None:intergenic | 60.0% | |
| GGCTCCATTTAGGGGTTGCG+AGG | - | chr5_3:66736419-66736438 | None:intergenic | 60.0% | |
| GTAAGGACGCCGTCGCATTC+TGG | + | chr5_3:66737937-66737956 | Msa0826400:CDS | 60.0% | |
| TGCGGCGGTATTGTTGCCGG+GGG | - | chr5_3:66732189-66732208 | None:intergenic | 65.0% | |
| GTGCGGCGGTATTGTTGCCG+GGG | - | chr5_3:66732190-66732209 | None:intergenic | 65.0% | |
| GGTGCGGCGGTATTGTTGCC+GGG | - | chr5_3:66732191-66732210 | None:intergenic | 65.0% | |
| CGGTGCGGCGGTATTGTTGC+CGG | - | chr5_3:66732192-66732211 | None:intergenic | 65.0% | |
| !! | AGGGAAGGGAGGGCTTTGGG+AGG | - | chr5_3:66736393-66736412 | None:intergenic | 65.0% |
| GGGAAGGGAAGGGAGGGCTT+TGG | - | chr5_3:66736397-66736416 | None:intergenic | 65.0% | |
| TGCGAGGGGAAGGGAAGGGA+GGG | - | chr5_3:66736403-66736422 | None:intergenic | 65.0% | |
| TTGCGAGGGGAAGGGAAGGG+AGG | - | chr5_3:66736404-66736423 | None:intergenic | 65.0% | |
| GGGTTGCGAGGGGAAGGGAA+GGG | - | chr5_3:66736407-66736426 | None:intergenic | 65.0% | |
| ! | GTGGTGGTGCCGGAACGGTG+CGG | - | chr5_3:66732207-66732226 | None:intergenic | 70.0% |
| GGGGTTGCGAGGGGAAGGGA+AGG | - | chr5_3:66736408-66736427 | None:intergenic | 70.0% | |
| ! | GTGGTGCCGGAACGGTGCGG+CGG | - | chr5_3:66732204-66732223 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 66732141 | 66739564 | 66732141 | ID=Msa0826400;Name=Msa0826400 |
| chr5_3 | mRNA | 66732141 | 66739564 | 66732141 | ID=Msa0826400-mRNA-1;Parent=Msa0826400;Name=Msa0826400-mRNA-1;_AED=0.08;_eAED=0.08;_QI=113|1|1|1|1|1|16|531|485 |
| chr5_3 | exon | 66732141 | 66732366 | 66732141 | ID=Msa0826400-mRNA-1:exon:20947;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66733269 | 66733441 | 66733269 | ID=Msa0826400-mRNA-1:exon:20948;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66734816 | 66734895 | 66734816 | ID=Msa0826400-mRNA-1:exon:20949;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66734982 | 66735080 | 66734982 | ID=Msa0826400-mRNA-1:exon:20950;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66735195 | 66735318 | 66735195 | ID=Msa0826400-mRNA-1:exon:20951;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66735723 | 66735781 | 66735723 | ID=Msa0826400-mRNA-1:exon:20952;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66735859 | 66735930 | 66735859 | ID=Msa0826400-mRNA-1:exon:20953;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66737050 | 66737120 | 66737050 | ID=Msa0826400-mRNA-1:exon:20954;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66737255 | 66737351 | 66737255 | ID=Msa0826400-mRNA-1:exon:20955;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66737655 | 66737729 | 66737655 | ID=Msa0826400-mRNA-1:exon:20956;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66737931 | 66738029 | 66737931 | ID=Msa0826400-mRNA-1:exon:20957;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66738253 | 66738396 | 66738253 | ID=Msa0826400-mRNA-1:exon:20958;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66738482 | 66738511 | 66738482 | ID=Msa0826400-mRNA-1:exon:20959;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66738601 | 66738663 | 66738601 | ID=Msa0826400-mRNA-1:exon:20960;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66738790 | 66738867 | 66738790 | ID=Msa0826400-mRNA-1:exon:20961;Parent=Msa0826400-mRNA-1 |
| chr5_3 | exon | 66738953 | 66739564 | 66738953 | ID=Msa0826400-mRNA-1:exon:20962;Parent=Msa0826400-mRNA-1 |
| chr5_3 | five_prime_UTR | 66732141 | 66732253 | 66732141 | ID=Msa0826400-mRNA-1:five_prime_utr;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66732254 | 66732366 | 66732254 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66733269 | 66733441 | 66733269 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66734816 | 66734895 | 66734816 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66734982 | 66735080 | 66734982 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66735195 | 66735318 | 66735195 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66735723 | 66735781 | 66735723 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66735859 | 66735930 | 66735859 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66737050 | 66737120 | 66737050 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66737255 | 66737351 | 66737255 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66737655 | 66737729 | 66737655 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66737931 | 66738029 | 66737931 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66738253 | 66738396 | 66738253 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66738482 | 66738511 | 66738482 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66738601 | 66738663 | 66738601 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66738790 | 66738867 | 66738790 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | CDS | 66738953 | 66739033 | 66738953 | ID=Msa0826400-mRNA-1:cds;Parent=Msa0826400-mRNA-1 |
| chr5_3 | three_prime_UTR | 66739034 | 66739564 | 66739034 | ID=Msa0826400-mRNA-1:three_prime_utr;Parent=Msa0826400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
