Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865790 | XP_003617999.1 | 98.144 | 485 | 9 | 0 | 1 | 485 | 1 | 485 | 0.0 | 985 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865790 | sp|Q9P775|YBEG_SCHPO | 36.196 | 489 | 275 | 12 | 1 | 473 | 3 | 470 | 6.65e-89 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865790 | G7K4Y5 | 98.144 | 485 | 9 | 0 | 1 | 485 | 1 | 485 | 0.0 | 985 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071760 | Msa0865790 | 0.813278 | 2.775431e-51 | -8.615850e-47 |
| Msa0790450 | Msa0865790 | 0.826408 | 2.758109e-54 | -8.615850e-47 |
| Msa0826400 | Msa0865790 | 0.846705 | 1.835950e-59 | -8.615850e-47 |
| Msa0188740 | Msa0865790 | 0.805937 | 1.048971e-49 | -8.615850e-47 |
| Msa0270160 | Msa0865790 | 0.819809 | 9.553857e-53 | -8.615850e-47 |
| Msa0865790 | Msa1037080 | 0.821764 | 3.394212e-53 | -8.615850e-47 |
| Msa0865790 | Msa1070810 | 0.826920 | 2.081079e-54 | -8.615850e-47 |
| Msa0865790 | Msa1136880 | 0.809806 | 1.577507e-50 | -8.615850e-47 |
| Msa0865790 | Msa1158630 | 0.825820 | 3.806038e-54 | -8.615850e-47 |
| Msa0865790 | Msa1341780 | 0.807924 | 3.985231e-50 | -8.615850e-47 |
| Msa0865790 | Msa1433590 | 0.806569 | 7.719368e-50 | -8.615850e-47 |
| Msa0865790 | Msa1450560 | 0.821637 | 3.632072e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865790 | MtrunA17_Chr5g0447911 | 98.144 | 485 | 9 | 0 | 1 | 485 | 1 | 485 | 0.0 | 985 |
| Msa0865790 | MtrunA17_Chr2g0283891 | 25.778 | 225 | 155 | 3 | 252 | 473 | 62 | 277 | 2.11e-13 | 71.2 |
| Msa0865790 | MtrunA17_Chr2g0283891 | 27.811 | 169 | 115 | 1 | 250 | 418 | 106 | 267 | 9.05e-11 | 63.2 |
| Msa0865790 | MtrunA17_Chr4g0052291 | 26.816 | 179 | 115 | 3 | 250 | 419 | 177 | 348 | 8.08e-12 | 67.0 |
| Msa0865790 | MtrunA17_Chr1g0185501 | 26.339 | 224 | 148 | 6 | 242 | 462 | 60 | 269 | 1.15e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865790 | AT4G18905.1 | 60.563 | 497 | 175 | 8 | 1 | 479 | 1 | 494 | 0.0 | 563 |
| Msa0865790 | AT4G18905.2 | 58.185 | 507 | 181 | 8 | 1 | 479 | 1 | 504 | 0.0 | 554 |
| Msa0865790 | AT4G18900.1 | 58.405 | 464 | 170 | 7 | 21 | 474 | 5 | 455 | 7.47e-178 | 507 |
| Msa0865790 | AT4G35370.1 | 52.609 | 460 | 166 | 7 | 2 | 456 | 3 | 415 | 7.10e-162 | 465 |
| Msa0865790 | AT1G29260.1 | 27.016 | 248 | 154 | 6 | 235 | 473 | 47 | 276 | 1.08e-14 | 75.5 |
| Msa0865790 | AT5G58230.1 | 28.333 | 180 | 113 | 3 | 250 | 420 | 177 | 349 | 1.44e-13 | 72.8 |
| Msa0865790 | AT5G13480.2 | 33.333 | 162 | 89 | 7 | 267 | 424 | 275 | 421 | 6.89e-12 | 68.2 |
| Msa0865790 | AT5G13480.3 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.00e-12 | 68.2 |
| Msa0865790 | AT5G13480.4 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.76e-12 | 68.2 |
| Msa0865790 | AT5G13480.1 | 33.333 | 162 | 89 | 7 | 267 | 424 | 264 | 410 | 8.28e-12 | 68.2 |
| Msa0865790 | AT2G43770.1 | 26.840 | 231 | 150 | 7 | 250 | 474 | 95 | 312 | 1.52e-11 | 66.2 |
| Msa0865790 | AT4G11110.1 | 29.878 | 164 | 103 | 4 | 256 | 418 | 777 | 929 | 4.79e-11 | 65.9 |
Find 148 sgRNAs with CRISPR-Local
Find 477 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGAAGATGAAGATTT+AGG | 0.118417 | 5_4:+66981216 | None:intergenic |
| TGGGACCATCCATTGAAATT+TGG | 0.157308 | 5_4:-66977622 | Msa0865790:CDS |
| GGTTGCATGTTCCAACATTT+TGG | 0.201619 | 5_4:-66974247 | Msa0865790:three_prime_UTR |
| AAGAAGAAGATGAAGATTTA+GGG | 0.230024 | 5_4:+66981217 | None:intergenic |
| TTATACTTAAGATTGATATT+TGG | 0.252354 | 5_4:-66974199 | Msa0865790:three_prime_UTR |
| CTGACAAGCGAGTGAAGATT+TGG | 0.281740 | 5_4:-66976091 | Msa0865790:CDS |
| TTCTTGGCTGTTGGTTCAAT+GGG | 0.292446 | 5_4:-66977641 | Msa0865790:CDS |
| CTTCTTGGCTGTTGGTTCAA+TGG | 0.294754 | 5_4:-66977642 | Msa0865790:CDS |
| TCATTATTATTATATTTAAT+AGG | 0.294984 | 5_4:+66973828 | None:intergenic |
| ATTAGGTGCTGCCGTATTAT+AGG | 0.306215 | 5_4:+66974995 | None:intergenic |
| GGATTTGAGTTATTCAGTTC+GGG | 0.308747 | 5_4:-66978553 | Msa0865790:CDS |
| GGGACCATCCATTGAAATTT+GGG | 0.330425 | 5_4:-66977621 | Msa0865790:CDS |
| CGGTGCGGCGGTATTGTTGC+CGG | 0.335986 | 5_4:+66981180 | None:intergenic |
| GCTTCTTGCGACTGGATCTA+TGG | 0.347478 | 5_4:-66974888 | Msa0865790:CDS |
| TGGCAAAGAGAAAAGGAAAA+AGG | 0.348457 | 5_4:-66977478 | Msa0865790:CDS |
| GTAAGGACGCCGTCGCATTC+TGG | 0.349631 | 5_4:-66975432 | Msa0865790:CDS |
| AACTACAACGGTTGGGCATT+GGG | 0.354724 | 5_4:+66974051 | None:intergenic |
| GGAGTATGATTCTGAAGATA+TGG | 0.361330 | 5_4:-66978385 | Msa0865790:CDS |
| TATGGTAACAGGGAACTTCT+TGG | 0.361380 | 5_4:-66977657 | Msa0865790:intron |
| CAAGTTCATATCGCGGGTAT+TGG | 0.366174 | 5_4:+66978155 | None:intergenic |
| TCTTCAATTTCATCTTTAGA+AGG | 0.369876 | 5_4:+66981049 | None:intergenic |
| ACAATACCGCCGCACCGTTC+CGG | 0.371804 | 5_4:-66981174 | Msa0865790:five_prime_UTR |
| AAGTCCAAACATTGTCTTCA+TGG | 0.376616 | 5_4:+66974296 | None:intergenic |
| CTATAACTCAATATTATATC+AGG | 0.377134 | 5_4:+66974337 | None:intergenic |
| CCCCTTAAAGGAGGAGAAAA+AGG | 0.386260 | 5_4:-66978072 | Msa0865790:intron |
| GCTTCAATGATATACAGTTT+TGG | 0.391642 | 5_4:-66974116 | Msa0865790:three_prime_UTR |
| AGGATTTGAGTTATTCAGTT+CGG | 0.394366 | 5_4:-66978554 | Msa0865790:CDS |
| CTGCCCATGAAGACAATGTT+TGG | 0.395501 | 5_4:-66974300 | Msa0865790:three_prime_UTR |
| TCTGCTTTCGAAACCCCTTT+CGG | 0.399941 | 5_4:+66981091 | None:intergenic |
| ATTTGTAACAGGTAAAACTT+TGG | 0.407331 | 5_4:-66974779 | Msa0865790:intron |
| GAAGGCATCTCTCGAAAATA+CGG | 0.412196 | 5_4:-66974392 | Msa0865790:CDS |
| TTTGTAACAGGTAAAACTTT+GGG | 0.415218 | 5_4:-66974778 | Msa0865790:intron |
| GCTGTGCAAAGTGGAAATTC+CGG | 0.418822 | 5_4:+66978108 | None:intergenic |
| TCACCATGATATCATCATTC+CGG | 0.419784 | 5_4:-66978127 | Msa0865790:CDS |
| AAGATTTGGGATGTTGTTGC+TGG | 0.420460 | 5_4:-66976077 | Msa0865790:CDS |
| CACAGGTTCAAGCAGTTGCT+TGG | 0.423769 | 5_4:-66975719 | Msa0865790:intron |
| CAACTACAACGGTTGGGCAT+TGG | 0.427953 | 5_4:+66974050 | None:intergenic |
| GGTGCGGCGGTATTGTTGCC+GGG | 0.428879 | 5_4:+66981181 | None:intergenic |
| TGCAGAGGATTCCAAAATGT+TGG | 0.429002 | 5_4:+66974236 | None:intergenic |
| AACAGGAATCAACCTCAATC+CGG | 0.434693 | 5_4:-66974362 | Msa0865790:CDS |
| TTGCTTGGAACAAGGAATAC+AGG | 0.435006 | 5_4:-66976270 | Msa0865790:intron |
| GAAAATACGGGAAATTCAAC+AGG | 0.436216 | 5_4:-66974379 | Msa0865790:CDS |
| ATTATTATATTTAATAGGTT+AGG | 0.443086 | 5_4:+66973833 | None:intergenic |
| TGATATTACCGACGCCTTGA+AGG | 0.443645 | 5_4:-66979989 | Msa0865790:CDS |
| AAGGCCCTTCAAAACATGTT+AGG | 0.446137 | 5_4:+66974074 | None:intergenic |
| CAATTTCGTGGATTCCGAAA+GGG | 0.447261 | 5_4:-66981105 | Msa0865790:CDS |
| TTAACCGTAGCTGGTGCAAT+TGG | 0.448209 | 5_4:-66980036 | Msa0865790:CDS |
| ATCCATGTTGAGATCCTTCA+AGG | 0.448626 | 5_4:+66979975 | None:intergenic |
| TTCTTCTTCTCTCGCGCCCC+CGG | 0.450355 | 5_4:-66981199 | Msa0865790:five_prime_UTR |
| GTCATGCAGCTTCTTGCGAC+TGG | 0.450737 | 5_4:-66974896 | Msa0865790:intron |
| TCTTTAGATGCAACAGAAGA+TGG | 0.451968 | 5_4:+66974738 | None:intergenic |
| TACTCAACTGTGAACAAGTT+GGG | 0.452382 | 5_4:-66974268 | Msa0865790:three_prime_UTR |
| GCACAACAGATCCTTCTTAG+TGG | 0.453648 | 5_4:-66975687 | Msa0865790:CDS |
| CAAACATTGTCTTCATGGGC+AGG | 0.454570 | 5_4:+66974301 | None:intergenic |
| ACAGGGAACTTCTTGGCTGT+TGG | 0.465917 | 5_4:-66977650 | Msa0865790:intron |
| CCTCCGATAGCCAACAAGAA+TGG | 0.466115 | 5_4:+66974540 | None:intergenic |
| TTATGATTGCCGCAATTTCG+TGG | 0.471697 | 5_4:-66981117 | Msa0865790:CDS |
| ACTCAGTACTTGGTCTTGCT+TGG | 0.472198 | 5_4:-66976285 | Msa0865790:CDS |
| CTCCGATAGCCAACAAGAAT+GGG | 0.474544 | 5_4:+66974541 | None:intergenic |
| ATCAAGGTCCCAAATTTCAA+TGG | 0.478209 | 5_4:+66977613 | None:intergenic |
| AACCCATTCTTGTTGGCTAT+CGG | 0.479323 | 5_4:-66974543 | Msa0865790:CDS |
| TTGGCTATCGGAGGCTCAAA+GGG | 0.481198 | 5_4:-66974531 | Msa0865790:CDS |
| ACAGGAATCAACCTCAATCC+GGG | 0.485663 | 5_4:-66974361 | Msa0865790:CDS |
| GTTTGATCATACTGTTGCCT+TGG | 0.487656 | 5_4:-66975661 | Msa0865790:intron |
| AGTCACACCGACTCAGTACT+TGG | 0.488863 | 5_4:-66976295 | Msa0865790:CDS |
| GACTGGATCTATGGATAAAA+CGG | 0.491616 | 5_4:-66974879 | Msa0865790:intron |
| TCCTGCCATGCAATGACAAA+AGG | 0.496658 | 5_4:+66973983 | None:intergenic |
| TACCTCTGTATCCTATAATA+CGG | 0.501888 | 5_4:-66975006 | Msa0865790:CDS |
| AAACTTTGCAGAAGGATGTA+AGG | 0.503411 | 5_4:-66975449 | Msa0865790:intron |
| GGTAGAGCCATGTGTGGTGT+TGG | 0.505588 | 5_4:-66977502 | Msa0865790:CDS |
| GTAGAGCCATGTGTGGTGTT+GGG | 0.506307 | 5_4:-66977501 | Msa0865790:CDS |
| GATGTACCTAGTGAGAGTGT+TGG | 0.506656 | 5_4:+66981018 | None:intergenic |
| CTCAATATTATATCAGGCCC+CGG | 0.510053 | 5_4:+66974343 | None:intergenic |
| AATGGATCATCACTCTGATA+AGG | 0.510295 | 5_4:-66976039 | Msa0865790:intron |
| AGAGGACAACCCATTCTTGT+TGG | 0.510888 | 5_4:-66974550 | Msa0865790:CDS |
| AAACATGTTAGGAAATATGA+TGG | 0.511291 | 5_4:+66974085 | None:intergenic |
| TTATATCAGGCCCCGGATTG+AGG | 0.518416 | 5_4:+66974350 | None:intergenic |
| TAGATGCAACAGAAGATGGT+TGG | 0.521703 | 5_4:+66974742 | None:intergenic |
| CAGCGCTGATGTAGAGAGCT+TGG | 0.522228 | 5_4:-66975394 | Msa0865790:CDS |
| AATTTCGTGGATTCCGAAAG+GGG | 0.523413 | 5_4:-66981104 | Msa0865790:CDS |
| TGTTGGGTGGCAAAGAGAAA+AGG | 0.525906 | 5_4:-66977485 | Msa0865790:CDS |
| TGGAAAGTGTACTATTACAA+TGG | 0.526286 | 5_4:-66976057 | Msa0865790:CDS |
| TTTATACACTTACAACATCA+AGG | 0.526703 | 5_4:+66977597 | None:intergenic |
| GTTGGCTATCGGAGGCTCAA+AGG | 0.527674 | 5_4:-66974532 | Msa0865790:CDS |
| GAGTTATTCAGTTCGGGGAA+CGG | 0.531807 | 5_4:-66978547 | Msa0865790:CDS |
| AATTTCCACTTTGCACAGCA+TGG | 0.534774 | 5_4:-66978104 | Msa0865790:CDS |
| ATTCCGGAATGATGATATCA+TGG | 0.539451 | 5_4:+66978124 | None:intergenic |
| GCACATGCTTTAACCGTAGC+TGG | 0.541928 | 5_4:-66980045 | Msa0865790:CDS |
| TGACAAGCGAGTGAAGATTT+GGG | 0.543098 | 5_4:-66976090 | Msa0865790:CDS |
| TACGGTCAGAGTGGTGGTGC+CGG | 0.545155 | 5_4:+66981155 | None:intergenic |
| GATCAAACGAACCACTAAGA+AGG | 0.549508 | 5_4:+66975676 | None:intergenic |
| TCAATTTCATCTTTAGAAGG+AGG | 0.552892 | 5_4:+66981052 | None:intergenic |
| TGGGACACCTTATCTGATGA+AGG | 0.553782 | 5_4:-66974410 | Msa0865790:CDS |
| AGGTCCCAAATTTCAATGGA+TGG | 0.555988 | 5_4:+66977617 | None:intergenic |
| AGAGATGCCTTCATCAGATA+AGG | 0.558744 | 5_4:+66974403 | None:intergenic |
| TCAGAGTGGTGGTGCCGGAA+CGG | 0.561104 | 5_4:+66981160 | None:intergenic |
| CATGGATAACTATGATGAAG+AGG | 0.561882 | 5_4:-66979959 | Msa0865790:CDS |
| GTGCGGCGGTATTGTTGCCG+GGG | 0.564212 | 5_4:+66981182 | None:intergenic |
| CCATTCTTGTTGGCTATCGG+AGG | 0.565307 | 5_4:-66974540 | Msa0865790:CDS |
| GAATGGGTTGTCCTCTGAGA+AGG | 0.566271 | 5_4:+66974557 | None:intergenic |
| TTTACCAATTGCACCAGCTA+CGG | 0.566294 | 5_4:+66980032 | None:intergenic |
| TGATGTAGAGAGCTTGGCAT+GGG | 0.570407 | 5_4:-66975388 | Msa0865790:CDS |
| CTACTCAACTGTGAACAAGT+TGG | 0.572927 | 5_4:-66974269 | Msa0865790:three_prime_UTR |
| TAACTCTGTTGTACACGATA+CGG | 0.573513 | 5_4:+66981137 | None:intergenic |
| AATATACAAGTTCATATCGC+GGG | 0.574203 | 5_4:+66978149 | None:intergenic |
| ACTTGGTCTTGCTTGGAACA+AGG | 0.574512 | 5_4:-66976278 | Msa0865790:CDS |
| TCATTGCATGGCAGGAACAT+CGG | 0.576715 | 5_4:-66973976 | Msa0865790:three_prime_UTR |
| CGCCTTGAAGGATCTCAACA+TGG | 0.577123 | 5_4:-66979977 | Msa0865790:CDS |
| AGTCCAAACATTGTCTTCAT+GGG | 0.580797 | 5_4:+66974297 | None:intergenic |
| ATTATAGGATACAGAGGTAA+CGG | 0.581773 | 5_4:+66975010 | None:intergenic |
| AAGGCATCTCTCGAAAATAC+GGG | 0.582528 | 5_4:-66974391 | Msa0865790:CDS |
| TTGCCACCCAACACCACACA+TGG | 0.587638 | 5_4:+66977495 | None:intergenic |
| TTTCGGAATCCACGAAATTG+CGG | 0.589319 | 5_4:+66981108 | None:intergenic |
| CAAACAACAACAGAATCAGT+TGG | 0.589362 | 5_4:+66978345 | None:intergenic |
| GCAATTGGTAAACCATCCAA+TGG | 0.595294 | 5_4:-66980021 | Msa0865790:CDS |
| AAACATTGTCTTCATGGGCA+GGG | 0.595322 | 5_4:+66974302 | None:intergenic |
| GCAATTTCGTGGATTCCGAA+AGG | 0.597881 | 5_4:-66981106 | Msa0865790:CDS |
| TCAAGCCATGCTGTGCAAAG+TGG | 0.598638 | 5_4:+66978099 | None:intergenic |
| ACAAAAGAGTGCTCAGTGTG+TGG | 0.598926 | 5_4:+66975363 | None:intergenic |
| CAGTCCGAACATCAAAACAT+TGG | 0.599001 | 5_4:+66975093 | None:intergenic |
| GAAATCAACAAAATACAAAG+AGG | 0.602238 | 5_4:-66976320 | Msa0865790:CDS |
| TGTTAGGTGAGTCTTGAAGA+TGG | 0.604591 | 5_4:-66975122 | Msa0865790:intron |
| ACAACGGTTGGGCATTGGGA+AGG | 0.606527 | 5_4:+66974055 | None:intergenic |
| GAGCCATGTGTGGTGTTGGG+TGG | 0.607120 | 5_4:-66977498 | Msa0865790:CDS |
| GAAGGGTAATCTCATTACAA+TGG | 0.608417 | 5_4:+66973899 | None:intergenic |
| CTGATGTAGAGAGCTTGGCA+TGG | 0.610832 | 5_4:-66975389 | Msa0865790:CDS |
| TCATCTCCAACACTCTCACT+AGG | 0.616650 | 5_4:-66981024 | Msa0865790:intron |
| TGTTGTTTGTGCGCGTACTG+AGG | 0.617359 | 5_4:-66978331 | Msa0865790:CDS |
| CCATGCAATGACAAAAGGCA+AGG | 0.617636 | 5_4:+66973988 | None:intergenic |
| GTTGAGATCCTTCAAGGCGT+CGG | 0.622922 | 5_4:+66979981 | None:intergenic |
| AGTAGCATTCTGCACAGATG+TGG | 0.625228 | 5_4:+66975058 | None:intergenic |
| ATTCTGCACAGATGTGGCAT+TGG | 0.628001 | 5_4:+66975064 | None:intergenic |
| GAATATACAAGTTCATATCG+CGG | 0.630543 | 5_4:+66978148 | None:intergenic |
| GCATTCTGGCTATACGTGGT+CGG | 0.636465 | 5_4:-66975418 | Msa0865790:CDS |
| AGCAAGACCAAGTACTGAGT+CGG | 0.637057 | 5_4:+66976288 | None:intergenic |
| CACGTATAGCCAGAATGCGA+CGG | 0.645659 | 5_4:+66975423 | None:intergenic |
| GATTTGAGTTATTCAGTTCG+GGG | 0.646430 | 5_4:-66978552 | Msa0865790:CDS |
| TGCGGCGGTATTGTTGCCGG+GGG | 0.649703 | 5_4:+66981183 | None:intergenic |
| CGTCGCATTCTGGCTATACG+TGG | 0.650851 | 5_4:-66975422 | Msa0865790:CDS |
| GTGGTGCCGGAACGGTGCGG+CGG | 0.654436 | 5_4:+66981168 | None:intergenic |
| CTGGCAGGTATGGATACTTG+AGG | 0.666889 | 5_4:-66978181 | Msa0865790:intron |
| CAGGAATCAACCTCAATCCG+GGG | 0.674342 | 5_4:-66974360 | Msa0865790:CDS |
| GTGGTGGTGCCGGAACGGTG+CGG | 0.676805 | 5_4:+66981165 | None:intergenic |
| ACACGATACGGTCAGAGTGG+TGG | 0.684721 | 5_4:+66981149 | None:intergenic |
| TATGATGAAGAGGATGACAA+AGG | 0.685139 | 5_4:-66979949 | Msa0865790:intron |
| TGCCGTATTATAGGATACAG+AGG | 0.687331 | 5_4:+66975004 | None:intergenic |
| TGTACACGATACGGTCAGAG+TGG | 0.702564 | 5_4:+66981146 | None:intergenic |
| TGATGAGGTAGAGCCATGTG+TGG | 0.762909 | 5_4:-66977508 | Msa0865790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | - | chr5_4:66980442-66980461 | Msa0865790:intron | 0.0% |
| !!! | TATGTAATTATATGTTTTTA+AGG | - | chr5_4:66976646-66976665 | Msa0865790:intron | 10.0% |
| !! | ATTATTATATTTAATAGGTT+AGG | + | chr5_4:66981225-66981244 | None:intergenic | 10.0% |
| !! | TAAAACTTATAAGATGAAAA+TGG | - | chr5_4:66974470-66974489 | Msa0865790:intron | 15.0% |
| !! | AAAACTTATAAGATGAAAAT+GGG | - | chr5_4:66974471-66974490 | Msa0865790:intron | 15.0% |
| !! | CAATAATAATTAATACAAGA+TGG | + | chr5_4:66974925-66974944 | None:intergenic | 15.0% |
| !! | ATCTTAAAATAGTTTCATTA+TGG | - | chr5_4:66977380-66977399 | Msa0865790:intron | 15.0% |
| !! | AAAAAAATCCTTGTTAAATA+GGG | + | chr5_4:66977492-66977511 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTAACTAACTTT+TGG | - | chr5_4:66978400-66978419 | Msa0865790:intron | 15.0% |
| !!! | ATCAAGTTTTAATACAAAAA+TGG | + | chr5_4:66978664-66978683 | None:intergenic | 15.0% |
| !! | TTTAAATGCTTCATTAATTA+CGG | - | chr5_4:66979113-66979132 | Msa0865790:intron | 15.0% |
| !!! | TTTTACAAATTACTTAAGAA+AGG | + | chr5_4:66979230-66979249 | None:intergenic | 15.0% |
| !! | AAACAATTTAAATAAGTCAA+GGG | + | chr5_4:66979275-66979294 | None:intergenic | 15.0% |
| !! | ATAATAAATAAAACTAACGA+GGG | + | chr5_4:66979828-66979847 | None:intergenic | 15.0% |
| !! | TATAATAAATAAAACTAACG+AGG | + | chr5_4:66979829-66979848 | None:intergenic | 15.0% |
| !! | TTATACTTAAGATTGATATT+TGG | - | chr5_4:66980856-66980875 | Msa0865790:intron | 15.0% |
| !!! | TTATAAGTTTTAATCGCTTA+TGG | + | chr5_4:66974462-66974481 | None:intergenic | 20.0% |
| !!! | TTGGTATTTTTCTCTTTTAA+GGG | - | chr5_4:66974494-66974513 | Msa0865790:intron | 20.0% |
| !! | TCTGTATAGAATATGTAATT+TGG | + | chr5_4:66974604-66974623 | None:intergenic | 20.0% |
| !! | AAATTACATATTCTATACAG+AGG | - | chr5_4:66974603-66974622 | Msa0865790:intron | 20.0% |
| !! | AATTACATATTCTATACAGA+GGG | - | chr5_4:66974604-66974623 | Msa0865790:intron | 20.0% |
| !!! | TTGTGTATTATTTTTTGTAG+AGG | - | chr5_4:66974697-66974716 | Msa0865790:intron | 20.0% |
| !! | TTAAGTGTTAAATACAGATT+CGG | + | chr5_4:66974883-66974902 | None:intergenic | 20.0% |
| !! | ATATACTTTAAATAGCTGAA+AGG | + | chr5_4:66975959-66975978 | None:intergenic | 20.0% |
| !!! | ATTTTTTCTCATGATATATC+AGG | - | chr5_4:66976481-66976500 | Msa0865790:intron | 20.0% |
| !!! | TTTTTATCAGAGTAATGAAT+TGG | - | chr5_4:66976537-66976556 | Msa0865790:intron | 20.0% |
| !!! | GTAATTATATGTTTTTAAGG+AGG | - | chr5_4:66976649-66976668 | Msa0865790:intron | 20.0% |
| !! | CAAAAAAATCCTTGTTAAAT+AGG | + | chr5_4:66977493-66977512 | None:intergenic | 20.0% |
| !! | CTGTTTGAAAATTTAAATGT+TGG | - | chr5_4:66977750-66977769 | Msa0865790:intron | 20.0% |
| !!! | TCTAACATTTTTCCAAAATT+TGG | - | chr5_4:66978227-66978246 | Msa0865790:intron | 20.0% |
| !!! | TTTGGATTTTGATTAGTATT+TGG | - | chr5_4:66978418-66978437 | Msa0865790:intron | 20.0% |
| !! | ATAATTATACAAGAAAACGA+GGG | + | chr5_4:66978507-66978526 | None:intergenic | 20.0% |
| !! | AATAATTATACAAGAAAACG+AGG | + | chr5_4:66978508-66978527 | None:intergenic | 20.0% |
| !! | CAAACAATTTAAATAAGTCA+AGG | + | chr5_4:66979276-66979295 | None:intergenic | 20.0% |
| !! | ATTAAGTAAAATTAGTACAC+AGG | + | chr5_4:66979742-66979761 | None:intergenic | 20.0% |
| !! | TAATAAATAAAACTAACGAG+GGG | + | chr5_4:66979827-66979846 | None:intergenic | 20.0% |
| !!! | AATTTCCAATTTTGTTTTCT+TGG | - | chr5_4:66979870-66979889 | Msa0865790:intron | 20.0% |
| !! | TACAATAGAGATATATAGTA+GGG | + | chr5_4:66980369-66980388 | None:intergenic | 20.0% |
| !! | TTACAATAGAGATATATAGT+AGG | + | chr5_4:66980370-66980389 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACAGAAGTTGT+CGG | + | chr5_4:66980432-66980451 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGGTGTTTGTT+AGG | - | chr5_4:66980457-66980476 | Msa0865790:intron | 20.0% |
| !!! | TTTTTTTTTGGTGTTTGTTA+GGG | - | chr5_4:66980458-66980477 | Msa0865790:intron | 20.0% |
| !!! | ATCTAATTATTTTGCAGTTA+TGG | - | chr5_4:66980625-66980644 | Msa0865790:intron | 20.0% |
| !!! | TCTAATTATTTTGCAGTTAT+GGG | - | chr5_4:66980626-66980645 | Msa0865790:intron | 20.0% |
| !! | CTATAACTCAATATTATATC+AGG | + | chr5_4:66980721-66980740 | None:intergenic | 20.0% |
| ! | AAGAAGAAGATGAAGATTTA+GGG | + | chr5_4:66973841-66973860 | None:intergenic | 25.0% |
| ! | TCTTCAATTTCATCTTTAGA+AGG | + | chr5_4:66974009-66974028 | None:intergenic | 25.0% |
| ! | AGTTTCAATTATGAATGAAG+AGG | + | chr5_4:66974075-66974094 | None:intergenic | 25.0% |
| ! | TGTGAGTAGTCAATAAAATT+TGG | - | chr5_4:66974421-66974440 | Msa0865790:intron | 25.0% |
| ! | GTGAGTAGTCAATAAAATTT+GGG | - | chr5_4:66974422-66974441 | Msa0865790:intron | 25.0% |
| !! | GTTGGTATTTTTCTCTTTTA+AGG | - | chr5_4:66974493-66974512 | Msa0865790:intron | 25.0% |
| !! | TTTGGTATTATTTCTTGTCA+GGG | + | chr5_4:66974586-66974605 | None:intergenic | 25.0% |
| !! | ATTTGGTATTATTTCTTGTC+AGG | + | chr5_4:66974587-66974606 | None:intergenic | 25.0% |
| ! | ATTTGTCCCCAATATAAAAA+TGG | - | chr5_4:66974663-66974682 | Msa0865790:intron | 25.0% |
| !!! | TCTCTACCATTTTTATATTG+GGG | + | chr5_4:66974672-66974691 | None:intergenic | 25.0% |
| !!! | GTCTCTACCATTTTTATATT+GGG | + | chr5_4:66974673-66974692 | None:intergenic | 25.0% |
| !!! | AGTCTCTACCATTTTTATAT+TGG | + | chr5_4:66974674-66974693 | None:intergenic | 25.0% |
| !!! | TTTTTTGTAGAGGACTAAAT+TGG | - | chr5_4:66974707-66974726 | Msa0865790:intron | 25.0% |
| !! | TTTTTGTAGAGGACTAAATT+GGG | - | chr5_4:66974708-66974727 | Msa0865790:intron | 25.0% |
| !!! | AATATCATCACTTTTTCCAT+TGG | + | chr5_4:66975053-66975072 | None:intergenic | 25.0% |
| ! | CAATTAGATTCCACATTATT+TGG | + | chr5_4:66975584-66975603 | None:intergenic | 25.0% |
| ! | CAAATAATGTGGAATCTAAT+TGG | - | chr5_4:66975582-66975601 | Msa0865790:intron | 25.0% |
| !!! | ACATTTTTTTGTACGACTAA+GGG | + | chr5_4:66975702-66975721 | None:intergenic | 25.0% |
| !!! | TACATTTTTTTGTACGACTA+AGG | + | chr5_4:66975703-66975722 | None:intergenic | 25.0% |
| ! | AAATGTAAAAGAAATGGATG+AGG | + | chr5_4:66975825-66975844 | None:intergenic | 25.0% |
| !! | ATCCATTTCTTTTACATTTG+AGG | - | chr5_4:66975826-66975845 | Msa0865790:intron | 25.0% |
| !! | TCCATTTCTTTTACATTTGA+GGG | - | chr5_4:66975827-66975846 | Msa0865790:intron | 25.0% |
| ! | GTATTCCTGATTATATTCTT+AGG | + | chr5_4:66975876-66975895 | None:intergenic | 25.0% |
| ! | ACTATTTCAATGTAACACAA+TGG | - | chr5_4:66975994-66976013 | Msa0865790:intron | 25.0% |
| ! | TCCATAAGCTACAAATTAAA+CGG | - | chr5_4:66976397-66976416 | Msa0865790:intron | 25.0% |
| ! | GTATAAATATAAGCAGCATA+AGG | + | chr5_4:66976459-66976478 | None:intergenic | 25.0% |
| !! | ACATTTTTATCGTTGATGTA+TGG | + | chr5_4:66976565-66976584 | None:intergenic | 25.0% |
| !! | TTTACTTGATACTTGTTGAT+GGG | - | chr5_4:66977024-66977043 | Msa0865790:intron | 25.0% |
| !! | ACATTTTACTTGCAAAGAAA+TGG | + | chr5_4:66977089-66977108 | None:intergenic | 25.0% |
| ! | TTTCTTTGCAAGTAAAATGT+AGG | - | chr5_4:66977089-66977108 | Msa0865790:intron | 25.0% |
| ! | TTCTTTGCAAGTAAAATGTA+GGG | - | chr5_4:66977090-66977109 | Msa0865790:intron | 25.0% |
| ! | AATAAGAAGACTAATACTTG+AGG | - | chr5_4:66977231-66977250 | Msa0865790:intron | 25.0% |
| ! | AAGATAATAAGATGATGCAA+AGG | + | chr5_4:66977365-66977384 | None:intergenic | 25.0% |
| ! | AATAGTTTCATTATGGTAAC+AGG | - | chr5_4:66977387-66977406 | Msa0865790:intron | 25.0% |
| ! | ATAGTTTCATTATGGTAACA+GGG | - | chr5_4:66977388-66977407 | Msa0865790:intron | 25.0% |
| ! | TTTATACACTTACAACATCA+AGG | + | chr5_4:66977461-66977480 | None:intergenic | 25.0% |
| ! | TCAACCACCATAAAATTATT+TGG | - | chr5_4:66977641-66977660 | Msa0865790:CDS | 25.0% |
| !! | GTAACCAAATAATTTTATGG+TGG | + | chr5_4:66977648-66977667 | None:intergenic | 25.0% |
| !! | GAGGTAACCAAATAATTTTA+TGG | + | chr5_4:66977651-66977670 | None:intergenic | 25.0% |
| ! | AGTGTTATAAAAACATAGAC+AGG | + | chr5_4:66977984-66978003 | None:intergenic | 25.0% |
| ! | CTAAAAGCAACTATTTAAGT+AGG | + | chr5_4:66978206-66978225 | None:intergenic | 25.0% |
| !! | TTTTTCCAAAATTTGGATTC+TGG | - | chr5_4:66978234-66978253 | Msa0865790:intron | 25.0% |
| !!! | ATTGATCATCTTTTGACTTT+TGG | - | chr5_4:66978370-66978389 | Msa0865790:CDS | 25.0% |
| ! | GAAATCAACAAAATACAAAG+AGG | - | chr5_4:66978735-66978754 | Msa0865790:intron | 25.0% |
| !!! | GAATACAGGTTTGTTAAATT+TGG | - | chr5_4:66978799-66978818 | Msa0865790:intron | 25.0% |
| ! | CAAATAAAACCATTATGTTC+AGG | + | chr5_4:66978859-66978878 | None:intergenic | 25.0% |
| ! | AAAGTTCTATATTGTTGACA+AGG | - | chr5_4:66979188-66979207 | Msa0865790:intron | 25.0% |
| ! | AATATTGCAAACAAAGTGTA+AGG | + | chr5_4:66979483-66979502 | None:intergenic | 25.0% |
| !! | TTTGAAGTTTAGCTATCTAA+TGG | - | chr5_4:66979570-66979589 | Msa0865790:intron | 25.0% |
| ! | TAGATCCAAGAAAACAAAAT+TGG | + | chr5_4:66979878-66979897 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCTTGGATCTAA+AGG | - | chr5_4:66979879-66979898 | Msa0865790:intron | 25.0% |
| ! | AATGATTTAATTGTCCTGTT+AGG | - | chr5_4:66979917-66979936 | Msa0865790:intron | 25.0% |
| !! | GTTTTACCTGTTACAAATAA+TGG | + | chr5_4:66980274-66980293 | None:intergenic | 25.0% |
| ! | ATTTGTAACAGGTAAAACTT+TGG | - | chr5_4:66980276-66980295 | Msa0865790:intron | 25.0% |
| ! | TTTGTAACAGGTAAAACTTT+GGG | - | chr5_4:66980277-66980296 | Msa0865790:intron | 25.0% |
| !!! | TTTTTTTTGGTGTTTGTTAG+GGG | - | chr5_4:66980459-66980478 | Msa0865790:intron | 25.0% |
| ! | TTAAGAATACCTGAAGTTAA+AGG | + | chr5_4:66980581-66980600 | None:intergenic | 25.0% |
| !!! | TTCAATGTTTTTGGTAGTTT+AGG | - | chr5_4:66980902-66980921 | Msa0865790:intron | 25.0% |
| ! | AAACATGTTAGGAAATATGA+TGG | + | chr5_4:66980973-66980992 | None:intergenic | 25.0% |
| !!! | TATTTCCTAACATGTTTTGA+AGG | - | chr5_4:66980976-66980995 | Msa0865790:intron | 25.0% |
| !!! | ATTTCCTAACATGTTTTGAA+GGG | - | chr5_4:66980977-66980996 | Msa0865790:intron | 25.0% |
| GAAGAAGAAGATGAAGATTT+AGG | + | chr5_4:66973842-66973861 | None:intergenic | 30.0% | |
| ! | TCAATTTCATCTTTAGAAGG+AGG | + | chr5_4:66974006-66974025 | None:intergenic | 30.0% |
| ! | TCTGAAACATCGTTATCAAA+TGG | + | chr5_4:66974151-66974170 | None:intergenic | 30.0% |
| AAAAATAAACCAATCCGAAC+AGG | - | chr5_4:66974377-66974396 | Msa0865790:CDS | 30.0% | |
| CTTATAAGATGAAAATGGGT+TGG | - | chr5_4:66974475-66974494 | Msa0865790:intron | 30.0% | |
| !! | ATTTTTCTCTTTTAAGGGAC+TGG | - | chr5_4:66974499-66974518 | Msa0865790:intron | 30.0% |
| TTCTTGTCAGGGAATAAATT+GGG | + | chr5_4:66974575-66974594 | None:intergenic | 30.0% | |
| TTTCTTGTCAGGGAATAAAT+TGG | + | chr5_4:66974576-66974595 | None:intergenic | 30.0% | |
| AAAATTATGAAGGACCAAAC+TGG | - | chr5_4:66974738-66974757 | Msa0865790:CDS | 30.0% | |
| AAATTATGAAGGACCAAACT+GGG | - | chr5_4:66974739-66974758 | Msa0865790:CDS | 30.0% | |
| ATTATTGCTTATTGCAGTGT+AGG | - | chr5_4:66974938-66974957 | Msa0865790:intron | 30.0% | |
| ATGAGTTAAAGATAGATGGA+TGG | + | chr5_4:66975144-66975163 | None:intergenic | 30.0% | |
| GTGAATGAGTTAAAGATAGA+TGG | + | chr5_4:66975148-66975167 | None:intergenic | 30.0% | |
| TACATGTGTCTATGTAATGT+CGG | + | chr5_4:66975327-66975346 | None:intergenic | 30.0% | |
| TAGACACATGTAGTTACATT+TGG | - | chr5_4:66975335-66975354 | Msa0865790:intron | 30.0% | |
| ! | TTTTCTGATCATGAGTTTAC+TGG | + | chr5_4:66975550-66975569 | None:intergenic | 30.0% |
| ACTACACTTACCAAATAATG+TGG | - | chr5_4:66975571-66975590 | Msa0865790:intron | 30.0% | |
| TAGAATATGAATGCACAACT+TGG | + | chr5_4:66975655-66975674 | None:intergenic | 30.0% | |
| TCCCTCAAATGTAAAAGAAA+TGG | + | chr5_4:66975831-66975850 | None:intergenic | 30.0% | |
| TTCCTGATTATATTCTTAGG+TGG | + | chr5_4:66975873-66975892 | None:intergenic | 30.0% | |
| ! | TGTATAAAAAGCGTAAACAC+TGG | - | chr5_4:66975913-66975932 | Msa0865790:intron | 30.0% |
| AATAGCTGAAAGGTTAATTG+CGG | + | chr5_4:66975949-66975968 | None:intergenic | 30.0% | |
| !! | TGTTTTTCAGTTGCATTAGT+AGG | - | chr5_4:66976100-66976119 | Msa0865790:CDS | 30.0% |
| ATTCATAAGGTTTGTAGTGT+TGG | + | chr5_4:66976324-66976343 | None:intergenic | 30.0% | |
| GGAAAAACTATGATAAACCA+AGG | + | chr5_4:66976438-66976457 | None:intergenic | 30.0% | |
| ! | AGGATTTGAGTTATTCAGTT+CGG | - | chr5_4:66976501-66976520 | Msa0865790:intron | 30.0% |
| ATCTTCAATTCATGTTCACA+AGG | + | chr5_4:66976784-66976803 | None:intergenic | 30.0% | |
| AATATACAAGTTCATATCGC+GGG | + | chr5_4:66976909-66976928 | None:intergenic | 30.0% | |
| GAATATACAAGTTCATATCG+CGG | + | chr5_4:66976910-66976929 | None:intergenic | 30.0% | |
| AGTAAAGAACTCATAGGATT+TGG | + | chr5_4:66977010-66977029 | None:intergenic | 30.0% | |
| GTATCAAGTAAAGAACTCAT+AGG | + | chr5_4:66977016-66977035 | None:intergenic | 30.0% | |
| ! | CTTTACTTGATACTTGTTGA+TGG | - | chr5_4:66977023-66977042 | Msa0865790:intron | 30.0% |
| ! | CTGTAATGTTTTATGCAGTT+TGG | - | chr5_4:66977051-66977070 | Msa0865790:intron | 30.0% |
| ! | AACATGAACTGTCATGTTTT+TGG | + | chr5_4:66977171-66977190 | None:intergenic | 30.0% |
| AAAAGGAAAAAGGGGAAAAA+TGG | - | chr5_4:66977587-66977606 | Msa0865790:intron | 30.0% | |
| AAAGGAAAAAGGGGAAAAAT+GGG | - | chr5_4:66977588-66977607 | Msa0865790:intron | 30.0% | |
| AAGTTGGAACCAAATAATGT+GGG | + | chr5_4:66977834-66977853 | None:intergenic | 30.0% | |
| !! | GTCTTTTTCACTCTCAAATA+AGG | - | chr5_4:66978031-66978050 | Msa0865790:intron | 30.0% |
| ! | AGAATCCAGAATCCAAATTT+TGG | + | chr5_4:66978242-66978261 | None:intergenic | 30.0% |
| ACAATAGAGCAAAATGTACT+TGG | + | chr5_4:66978321-66978340 | None:intergenic | 30.0% | |
| ! | TACATTTTGCTCTATTGTCA+GGG | - | chr5_4:66978323-66978342 | Msa0865790:CDS | 30.0% |
| !!! | GGATTTTGATTAGTATTTGG+TGG | - | chr5_4:66978421-66978440 | Msa0865790:intron | 30.0% |
| CTAGATTTACCAACAACAAA+TGG | - | chr5_4:66978576-66978595 | Msa0865790:intron | 30.0% | |
| !! | AAGAGATTTCCATTTGTTGT+TGG | + | chr5_4:66978588-66978607 | None:intergenic | 30.0% |
| !! | TGCTGATTCTGTAATTTGTT+TGG | - | chr5_4:66978707-66978726 | Msa0865790:intron | 30.0% |
| ! | TGGAAAGTGTACTATTACAA+TGG | - | chr5_4:66978998-66979017 | Msa0865790:intron | 30.0% |
| CAATTTAAATAAGTCAAGGG+CGG | + | chr5_4:66979272-66979291 | None:intergenic | 30.0% | |
| GAAAAATTGGATCATTACCA+AGG | + | chr5_4:66979414-66979433 | None:intergenic | 30.0% | |
| ! | TCCAATTTTTCCTTGTTACT+TGG | - | chr5_4:66979423-66979442 | Msa0865790:intron | 30.0% |
| GTGTTAATAAACTTTGCAGA+AGG | - | chr5_4:66979598-66979617 | Msa0865790:intron | 30.0% | |
| ATTATAGGATACAGAGGTAA+CGG | + | chr5_4:66980048-66980067 | None:intergenic | 30.0% | |
| TACCTCTGTATCCTATAATA+CGG | - | chr5_4:66980049-66980068 | Msa0865790:CDS | 30.0% | |
| GTGTTGAAGATACATACATT+AGG | + | chr5_4:66980080-66980099 | None:intergenic | 30.0% | |
| TTACTGCCATTATTTGTAAC+AGG | - | chr5_4:66980265-66980284 | Msa0865790:intron | 30.0% | |
| ! | AAGAAAAAACTGACAGCTTT+TGG | + | chr5_4:66980344-66980363 | None:intergenic | 30.0% |
| !!! | TTTTTTTGGTGTTTGTTAGG+GGG | - | chr5_4:66980460-66980479 | Msa0865790:intron | 30.0% |
| ! | GTAATGAGCTTCAATGTTTT+TGG | - | chr5_4:66980893-66980912 | Msa0865790:intron | 30.0% |
| ! | GCTTCAATGATATACAGTTT+TGG | - | chr5_4:66980939-66980958 | Msa0865790:intron | 30.0% |
| AAAAAACAACTACAACGGTT+GGG | + | chr5_4:66981014-66981033 | None:intergenic | 30.0% | |
| TGAGGAAAAAACAACTACAA+CGG | + | chr5_4:66981019-66981038 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTTCCTCACTAAA+AGG | - | chr5_4:66981024-66981043 | Msa0865790:intron | 30.0% |
| ! | AAACTCTTAACCTTTTAGTG+AGG | + | chr5_4:66981037-66981056 | None:intergenic | 30.0% |
| TAACTCTGTTGTACACGATA+CGG | + | chr5_4:66973921-66973940 | None:intergenic | 35.0% | |
| !! | AAATTGTGACGGACCATAAT+GGG | + | chr5_4:66974544-66974563 | None:intergenic | 35.0% |
| !! | TAAATTGTGACGGACCATAA+TGG | + | chr5_4:66974545-66974564 | None:intergenic | 35.0% |
| ! | GGTCCTTCATAATTTTCTTG+TGG | + | chr5_4:66974734-66974753 | None:intergenic | 35.0% |
| ! | AAGAGCTTTTGAGCAGAAAA+TGG | + | chr5_4:66974798-66974817 | None:intergenic | 35.0% |
| AAGCTCTTCACTTAAAGTCT+TGG | - | chr5_4:66974810-66974829 | Msa0865790:intron | 35.0% | |
| AGCTCTTCACTTAAAGTCTT+GGG | - | chr5_4:66974811-66974830 | Msa0865790:intron | 35.0% | |
| ATACATGAAAAGGATGGCAA+TGG | + | chr5_4:66974859-66974878 | None:intergenic | 35.0% | |
| TTCGGAATACATGAAAAGGA+TGG | + | chr5_4:66974865-66974884 | None:intergenic | 35.0% | |
| CAGATTCGGAATACATGAAA+AGG | + | chr5_4:66974869-66974888 | None:intergenic | 35.0% | |
| !!! | TCATCACTTTTTCCATTGGA+TGG | + | chr5_4:66975049-66975068 | None:intergenic | 35.0% |
| CATGGATAACTATGATGAAG+AGG | - | chr5_4:66975096-66975115 | Msa0865790:CDS | 35.0% | |
| TATGATGAAGAGGATGACAA+AGG | - | chr5_4:66975106-66975125 | Msa0865790:CDS | 35.0% | |
| ! | AAAGTTTTGCACCTAAACCA+AGG | + | chr5_4:66975457-66975476 | None:intergenic | 35.0% |
| !!! | GGTGCAAAACTTTTTTCTGA+TGG | - | chr5_4:66975464-66975483 | Msa0865790:intron | 35.0% |
| CTGTAATGTAATACCAAACC+TGG | - | chr5_4:66975487-66975506 | Msa0865790:intron | 35.0% | |
| GTGGAATCTAATTGGTAAAG+AGG | - | chr5_4:66975590-66975609 | Msa0865790:intron | 35.0% | |
| TGCCACCTAAGAATATAATC+AGG | - | chr5_4:66975868-66975887 | Msa0865790:intron | 35.0% | |
| ! | TAAAAAGCGTAAACACTGGT+AGG | - | chr5_4:66975917-66975936 | Msa0865790:intron | 35.0% |
| !! | GCCGTTTAATTTGTAGCTTA+TGG | + | chr5_4:66976401-66976420 | None:intergenic | 35.0% |
| ATTAAACGGCTTATCCAAAC+AGG | - | chr5_4:66976411-66976430 | Msa0865790:intron | 35.0% | |
| TTAAACGGCTTATCCAAACA+GGG | - | chr5_4:66976412-66976431 | Msa0865790:intron | 35.0% | |
| ! | GGATTTGAGTTATTCAGTTC+GGG | - | chr5_4:66976502-66976521 | Msa0865790:intron | 35.0% |
| ! | GATTTGAGTTATTCAGTTCG+GGG | - | chr5_4:66976503-66976522 | Msa0865790:intron | 35.0% |
| TAACAAAACCATGCAAGTGT+TGG | + | chr5_4:66976598-66976617 | None:intergenic | 35.0% | |
| !!! | ACACTTGCATGGTTTTGTTA+AGG | - | chr5_4:66976598-66976617 | Msa0865790:intron | 35.0% |
| ! | GGAGTATGATTCTGAAGATA+TGG | - | chr5_4:66976670-66976689 | Msa0865790:intron | 35.0% |
| CAAACAACAACAGAATCAGT+TGG | + | chr5_4:66976713-66976732 | None:intergenic | 35.0% | |
| TATTACATGTTTATCTGCCC+TGG | - | chr5_4:66976855-66976874 | Msa0865790:intron | 35.0% | |
| TCACCATGATATCATCATTC+CGG | - | chr5_4:66976928-66976947 | Msa0865790:intron | 35.0% | |
| ATTCCGGAATGATGATATCA+TGG | + | chr5_4:66976934-66976953 | None:intergenic | 35.0% | |
| ! | ACCTTTTTCTCCTCCTTTAA+GGG | + | chr5_4:66976987-66977006 | None:intergenic | 35.0% |
| ATCAAGGTCCCAAATTTCAA+TGG | + | chr5_4:66977445-66977464 | None:intergenic | 35.0% | |
| TGTTGTTGCCCTATTTAACA+AGG | - | chr5_4:66977481-66977500 | Msa0865790:CDS | 35.0% | |
| ! | CTTTTGTTCTCAGATTGATG+AGG | - | chr5_4:66977532-66977551 | Msa0865790:intron | 35.0% |
| TGGCAAAGAGAAAAGGAAAA+AGG | - | chr5_4:66977577-66977596 | Msa0865790:intron | 35.0% | |
| GGCAAAGAGAAAAGGAAAAA+GGG | - | chr5_4:66977578-66977597 | Msa0865790:intron | 35.0% | |
| GCAAAGAGAAAAGGAAAAAG+GGG | - | chr5_4:66977579-66977598 | Msa0865790:intron | 35.0% | |
| AAAGGGGAAAAATGGGAAAA+AGG | - | chr5_4:66977595-66977614 | Msa0865790:intron | 35.0% | |
| GGAACTCAAAAAATGGGAAA+AGG | + | chr5_4:66977811-66977830 | None:intergenic | 35.0% | |
| AGTTGGAACCAAATAATGTG+GGG | + | chr5_4:66977833-66977852 | None:intergenic | 35.0% | |
| GAAGTTGGAACCAAATAATG+TGG | + | chr5_4:66977835-66977854 | None:intergenic | 35.0% | |
| TACTCCTTCAACTTGAATGT+GGG | - | chr5_4:66977862-66977881 | Msa0865790:intron | 35.0% | |
| ACAAAATCACCGTAATGTGA+GGG | - | chr5_4:66977904-66977923 | Msa0865790:intron | 35.0% | |
| ! | TTTTGTGTTCCCTCACATTA+CGG | + | chr5_4:66977916-66977935 | None:intergenic | 35.0% |
| AGGGAACACAAAAACTGTAT+TGG | - | chr5_4:66977923-66977942 | Msa0865790:intron | 35.0% | |
| GAACACAAAAACTGTATTGG+AGG | - | chr5_4:66977926-66977945 | Msa0865790:intron | 35.0% | |
| AAACCATTAGGCTCCATTTA+GGG | + | chr5_4:66978114-66978133 | None:intergenic | 35.0% | |
| TAGTATGCAGCTACTCAATA+TGG | + | chr5_4:66978155-66978174 | None:intergenic | 35.0% | |
| !! | CATATCTACCTTCTAGTTTG+TGG | - | chr5_4:66978270-66978289 | Msa0865790:intron | 35.0% |
| AATACCATCCACAAACTAGA+AGG | + | chr5_4:66978281-66978300 | None:intergenic | 35.0% | |
| ! | GTACATTTTGCTCTATTGTC+AGG | - | chr5_4:66978322-66978341 | Msa0865790:CDS | 35.0% |
| ! | TGTTGTTGGTAAATCTAGCT+TGG | + | chr5_4:66978574-66978593 | None:intergenic | 35.0% |
| CAAATTACAGAATCAGCAAG+AGG | + | chr5_4:66978705-66978724 | None:intergenic | 35.0% | |
| CTATGCTTTCCTGAACATAA+TGG | - | chr5_4:66978847-66978866 | Msa0865790:intron | 35.0% | |
| GTCAAACTCAAAAGATGTCA+AGG | + | chr5_4:66978900-66978919 | None:intergenic | 35.0% | |
| AATGGATCATCACTCTGATA+AGG | - | chr5_4:66979016-66979035 | Msa0865790:intron | 35.0% | |
| ! | ATGTGGATTGAAAGACATCA+TGG | + | chr5_4:66979311-66979330 | None:intergenic | 35.0% |
| GCCAAGTAACAAGGAAAAAT+TGG | + | chr5_4:66979427-66979446 | None:intergenic | 35.0% | |
| TGTAGAAAAGCCAAGTAACA+AGG | + | chr5_4:66979436-66979455 | None:intergenic | 35.0% | |
| AAACTTTGCAGAAGGATGTA+AGG | - | chr5_4:66979606-66979625 | Msa0865790:intron | 35.0% | |
| !!! | CGATCCAATGTTTTGATGTT+CGG | - | chr5_4:66979958-66979977 | Msa0865790:CDS | 35.0% |
| GACTGGATCTATGGATAAAA+CGG | - | chr5_4:66980176-66980195 | Msa0865790:intron | 35.0% | |
| TCTTTAGATGCAACAGAAGA+TGG | + | chr5_4:66980320-66980339 | None:intergenic | 35.0% | |
| GAAAATACGGGAAATTCAAC+AGG | - | chr5_4:66980676-66980695 | Msa0865790:intron | 35.0% | |
| AGTCCAAACATTGTCTTCAT+GGG | + | chr5_4:66980761-66980780 | None:intergenic | 35.0% | |
| AAGTCCAAACATTGTCTTCA+TGG | + | chr5_4:66980762-66980781 | None:intergenic | 35.0% | |
| TACTCAACTGTGAACAAGTT+GGG | - | chr5_4:66980787-66980806 | Msa0865790:intron | 35.0% | |
| ! | ATAAGACTTGCATTTTGCAG+AGG | + | chr5_4:66980837-66980856 | None:intergenic | 35.0% |
| GAAAAAACAACTACAACGGT+TGG | + | chr5_4:66981015-66981034 | None:intergenic | 35.0% | |
| GAAGGGTAATCTCATTACAA+TGG | + | chr5_4:66981159-66981178 | None:intergenic | 35.0% | |
| TGCTCATCACACAAAAAGAA+GGG | + | chr5_4:66981176-66981195 | None:intergenic | 35.0% | |
| TTGCTCATCACACAAAAAGA+AGG | + | chr5_4:66981177-66981196 | None:intergenic | 35.0% | |
| TTATGATTGCCGCAATTTCG+TGG | - | chr5_4:66973938-66973957 | Msa0865790:three_prime_UTR | 40.0% | |
| TTTCGGAATCCACGAAATTG+CGG | + | chr5_4:66973950-66973969 | None:intergenic | 40.0% | |
| CAATTTCGTGGATTCCGAAA+GGG | - | chr5_4:66973950-66973969 | Msa0865790:three_prime_UTR | 40.0% | |
| AATTTCGTGGATTCCGAAAG+GGG | - | chr5_4:66973951-66973970 | Msa0865790:three_prime_UTR | 40.0% | |
| AGAAGGAGGTTCAGCAAAAA+CGG | + | chr5_4:66973992-66974011 | None:intergenic | 40.0% | |
| !!! | CTTTTAAGGGACTGGCTTAT+TGG | - | chr5_4:66974507-66974526 | Msa0865790:intron | 40.0% |
| GGGCCACAAGAAAATTATGA+AGG | - | chr5_4:66974728-66974747 | Msa0865790:CDS | 40.0% | |
| TAAAGTCTTGGGTGAAGAGA+TGG | - | chr5_4:66974822-66974841 | Msa0865790:intron | 40.0% | |
| TTTACCAATTGCACCAGCTA+CGG | + | chr5_4:66975026-66975045 | None:intergenic | 40.0% | |
| GCAATTGGTAAACCATCCAA+TGG | - | chr5_4:66975034-66975053 | Msa0865790:CDS | 40.0% | |
| ATCCATGTTGAGATCCTTCA+AGG | + | chr5_4:66975083-66975102 | None:intergenic | 40.0% | |
| TACCTAACTATGTACTCTGC+CGG | - | chr5_4:66975169-66975188 | Msa0865790:intron | 40.0% | |
| ATTACGCCACTGGATAAAAC+CGG | + | chr5_4:66975191-66975210 | None:intergenic | 40.0% | |
| TAATCACTTGTGAGGCTGTT+TGG | - | chr5_4:66975207-66975226 | Msa0865790:intron | 40.0% | |
| GTTTATGAGTTCAGCTACCT+TGG | - | chr5_4:66975437-66975456 | Msa0865790:CDS | 40.0% | |
| TATGTGTAGTATCACATGCC+AGG | + | chr5_4:66975508-66975527 | None:intergenic | 40.0% | |
| ! | TTTTGTACGACTAAGGGTCA+AGG | + | chr5_4:66975696-66975715 | None:intergenic | 40.0% |
| ! | CATAAGGTTTGTAGTGTTGG+AGG | + | chr5_4:66976321-66976340 | None:intergenic | 40.0% |
| GATAAGTTCCAACACTTGCA+TGG | - | chr5_4:66976587-66976606 | Msa0865790:intron | 40.0% | |
| AATTTCCACTTTGCACAGCA+TGG | - | chr5_4:66976951-66976970 | Msa0865790:intron | 40.0% | |
| !! | CTTTTTCTCCTCCTTTAAGG+GGG | + | chr5_4:66976985-66977004 | None:intergenic | 40.0% |
| ! | CCTTTTTCTCCTCCTTTAAG+GGG | + | chr5_4:66976986-66977005 | None:intergenic | 40.0% |
| ! | GACCTTTTTCTCCTCCTTTA+AGG | + | chr5_4:66976988-66977007 | None:intergenic | 40.0% |
| TATGGTAACAGGGAACTTCT+TGG | - | chr5_4:66977398-66977417 | Msa0865790:intron | 40.0% | |
| !! | TTCTTGGCTGTTGGTTCAAT+GGG | - | chr5_4:66977414-66977433 | Msa0865790:intron | 40.0% |
| TGGGACCATCCATTGAAATT+TGG | - | chr5_4:66977433-66977452 | Msa0865790:intron | 40.0% | |
| GGGACCATCCATTGAAATTT+GGG | - | chr5_4:66977434-66977453 | Msa0865790:intron | 40.0% | |
| AGGTCCCAAATTTCAATGGA+TGG | + | chr5_4:66977441-66977460 | None:intergenic | 40.0% | |
| ! | TTTGGTTACCTCTTTTGCTC+TGG | - | chr5_4:66977659-66977678 | Msa0865790:intron | 40.0% |
| !! | ACATGTGCTGTTCTTTTGTG+TGG | - | chr5_4:66977721-66977740 | Msa0865790:intron | 40.0% |
| TGTTGGTCGTCTATAACTGT+TGG | - | chr5_4:66977767-66977786 | Msa0865790:intron | 40.0% | |
| GTTGGTCGTCTATAACTGTT+GGG | - | chr5_4:66977768-66977787 | Msa0865790:intron | 40.0% | |
| TGTGGGGGAACTCAAAAAAT+GGG | + | chr5_4:66977817-66977836 | None:intergenic | 40.0% | |
| ATGTGGGGGAACTCAAAAAA+TGG | + | chr5_4:66977818-66977837 | None:intergenic | 40.0% | |
| TTGAGTTCCCCCACATTATT+TGG | - | chr5_4:66977822-66977841 | Msa0865790:intron | 40.0% | |
| GTTGGAACCAAATAATGTGG+GGG | + | chr5_4:66977832-66977851 | None:intergenic | 40.0% | |
| GTACTCCTTCAACTTGAATG+TGG | - | chr5_4:66977861-66977880 | Msa0865790:intron | 40.0% | |
| ACTCCTTCAACTTGAATGTG+GGG | - | chr5_4:66977863-66977882 | Msa0865790:intron | 40.0% | |
| !! | AAACCCCACATTCAAGTTGA+AGG | + | chr5_4:66977869-66977888 | None:intergenic | 40.0% |
| CACAAAATCACCGTAATGTG+AGG | - | chr5_4:66977903-66977922 | Msa0865790:intron | 40.0% | |
| CACAAAAACTGTATTGGAGG+AGG | - | chr5_4:66977929-66977948 | Msa0865790:intron | 40.0% | |
| ACTGTATTGGAGGAGGATTT+AGG | - | chr5_4:66977936-66977955 | Msa0865790:intron | 40.0% | |
| AACCATTAGGCTCCATTTAG+GGG | + | chr5_4:66978113-66978132 | None:intergenic | 40.0% | |
| CAAACCATTAGGCTCCATTT+AGG | + | chr5_4:66978115-66978134 | None:intergenic | 40.0% | |
| CTAAATGGAGCCTAATGGTT+TGG | - | chr5_4:66978113-66978132 | Msa0865790:CDS | 40.0% | |
| !! | TCTACCTTCTAGTTTGTGGA+TGG | - | chr5_4:66978274-66978293 | Msa0865790:intron | 40.0% |
| TGTACTTGGACTTGAGTGAA+TGG | + | chr5_4:66978307-66978326 | None:intergenic | 40.0% | |
| AGTGAAGACTTATCGAGTCA+GGG | + | chr5_4:66978349-66978368 | None:intergenic | 40.0% | |
| ATAGATGCCATATGCATGTG+AGG | - | chr5_4:66978454-66978473 | Msa0865790:intron | 40.0% | |
| TAGATGCCATATGCATGTGA+GGG | - | chr5_4:66978455-66978474 | Msa0865790:intron | 40.0% | |
| ! | GTTGGTAAATCTAGCTTGGA+AGG | + | chr5_4:66978570-66978589 | None:intergenic | 40.0% |
| TTGCTTGGAACAAGGAATAC+AGG | - | chr5_4:66978785-66978804 | Msa0865790:intron | 40.0% | |
| TGACAAGCGAGTGAAGATTT+GGG | - | chr5_4:66978965-66978984 | Msa0865790:intron | 40.0% | |
| ! | AAGATTTGGGATGTTGTTGC+TGG | - | chr5_4:66978978-66978997 | Msa0865790:intron | 40.0% |
| GGATTGAAAGACATCATGGA+AGG | + | chr5_4:66979307-66979326 | None:intergenic | 40.0% | |
| TTCAATCCACATATCCTCAC+AGG | - | chr5_4:66979319-66979338 | Msa0865790:intron | 40.0% | |
| GATCAAACGAACCACTAAGA+AGG | + | chr5_4:66979382-66979401 | None:intergenic | 40.0% | |
| GTTTGATCATACTGTTGCCT+TGG | - | chr5_4:66979394-66979413 | Msa0865790:intron | 40.0% | |
| !! | GTGCGTTATGGTTATTTCTG+AGG | - | chr5_4:66979716-66979735 | Msa0865790:intron | 40.0% |
| ATCTTCAAGACTCACCTAAC+AGG | + | chr5_4:66979934-66979953 | None:intergenic | 40.0% | |
| TGTTAGGTGAGTCTTGAAGA+TGG | - | chr5_4:66979933-66979952 | Msa0865790:intron | 40.0% | |
| CAGTCCGAACATCAAAACAT+TGG | + | chr5_4:66979965-66979984 | None:intergenic | 40.0% | |
| TGCCGTATTATAGGATACAG+AGG | + | chr5_4:66980054-66980073 | None:intergenic | 40.0% | |
| ! | ATTAGGTGCTGCCGTATTAT+AGG | + | chr5_4:66980063-66980082 | None:intergenic | 40.0% |
| TTAACCCTACCCTATTGACA+TGG | - | chr5_4:66980135-66980154 | Msa0865790:intron | 40.0% | |
| TGCATGACACCATGTCAATA+GGG | + | chr5_4:66980147-66980166 | None:intergenic | 40.0% | |
| TAGATGCAACAGAAGATGGT+TGG | + | chr5_4:66980316-66980335 | None:intergenic | 40.0% | |
| ! | CTTTTCTATCTCCTTCTCAG+AGG | - | chr5_4:66980487-66980506 | Msa0865790:intron | 40.0% |
| ! | AACCCATTCTTGTTGGCTAT+CGG | - | chr5_4:66980512-66980531 | Msa0865790:intron | 40.0% |
| ! | AGCAGATGACCTTTAACTTC+AGG | - | chr5_4:66980569-66980588 | Msa0865790:intron | 40.0% |
| AGAGATGCCTTCATCAGATA+AGG | + | chr5_4:66980655-66980674 | None:intergenic | 40.0% | |
| !! | GAAGGCATCTCTCGAAAATA+CGG | - | chr5_4:66980663-66980682 | Msa0865790:intron | 40.0% |
| ! | AAGGCATCTCTCGAAAATAC+GGG | - | chr5_4:66980664-66980683 | Msa0865790:intron | 40.0% |
| AACAGGAATCAACCTCAATC+CGG | - | chr5_4:66980693-66980712 | Msa0865790:intron | 40.0% | |
| CTCAATATTATATCAGGCCC+CGG | + | chr5_4:66980715-66980734 | None:intergenic | 40.0% | |
| AAACATTGTCTTCATGGGCA+GGG | + | chr5_4:66980756-66980775 | None:intergenic | 40.0% | |
| CTACTCAACTGTGAACAAGT+TGG | - | chr5_4:66980786-66980805 | Msa0865790:intron | 40.0% | |
| ! | GGTTGCATGTTCCAACATTT+TGG | - | chr5_4:66980808-66980827 | Msa0865790:intron | 40.0% |
| TGCAGAGGATTCCAAAATGT+TGG | + | chr5_4:66980822-66980841 | None:intergenic | 40.0% | |
| AAGGCCCTTCAAAACATGTT+AGG | + | chr5_4:66980984-66981003 | None:intergenic | 40.0% | |
| GCAATTTCGTGGATTCCGAA+AGG | - | chr5_4:66973949-66973968 | Msa0865790:three_prime_UTR | 45.0% | |
| TCTGCTTTCGAAACCCCTTT+CGG | + | chr5_4:66973967-66973986 | None:intergenic | 45.0% | |
| GAAGGAGGTTCAGCAAAAAC+GGG | + | chr5_4:66973991-66974010 | None:intergenic | 45.0% | |
| TCATCTCCAACACTCTCACT+AGG | - | chr5_4:66974031-66974050 | Msa0865790:three_prime_UTR | 45.0% | |
| ! | GATGTACCTAGTGAGAGTGT+TGG | + | chr5_4:66974040-66974059 | None:intergenic | 45.0% |
| CAAGTGATTAACGGCCTGTT+CGG | + | chr5_4:66974394-66974413 | None:intergenic | 45.0% | |
| GGTTGAGTGAAGACCCATTA+TGG | - | chr5_4:66974528-66974547 | Msa0865790:CDS | 45.0% | |
| GGGTCGAGAGTAAATTGTGA+CGG | + | chr5_4:66974555-66974574 | None:intergenic | 45.0% | |
| TCCCTGACAGATTACATCAG+AGG | - | chr5_4:66974635-66974654 | Msa0865790:intron | 45.0% | |
| CCCTCTGATGTAATCTGTCA+GGG | + | chr5_4:66974639-66974658 | None:intergenic | 45.0% | |
| CCCTGACAGATTACATCAGA+GGG | - | chr5_4:66974636-66974655 | Msa0865790:intron | 45.0% | |
| TCCCTCTGATGTAATCTGTC+AGG | + | chr5_4:66974640-66974659 | None:intergenic | 45.0% | |
| CTAAGAGTGAAGACCCAGTT+TGG | + | chr5_4:66974755-66974774 | None:intergenic | 45.0% | |
| TTAACCGTAGCTGGTGCAAT+TGG | - | chr5_4:66975019-66975038 | Msa0865790:CDS | 45.0% | |
| TGATATTACCGACGCCTTGA+AGG | - | chr5_4:66975066-66975085 | Msa0865790:CDS | 45.0% | |
| AACCGGCAGAGTACATAGTT+AGG | + | chr5_4:66975174-66975193 | None:intergenic | 45.0% | |
| GAGTTCAGCTACCTTGGTTT+AGG | - | chr5_4:66975443-66975462 | Msa0865790:intron | 45.0% | |
| GTAGTATCACATGCCAGGTT+TGG | + | chr5_4:66975503-66975522 | None:intergenic | 45.0% | |
| AAGGGTCAAGGTTCTGTTCT+AGG | + | chr5_4:66975684-66975703 | None:intergenic | 45.0% | |
| TGATAAACCAAGGCCCTGTT+TGG | + | chr5_4:66976428-66976447 | None:intergenic | 45.0% | |
| GAGTTATTCAGTTCGGGGAA+CGG | - | chr5_4:66976508-66976527 | Msa0865790:intron | 45.0% | |
| TCAAGTATCCATACCTGCCA+GGG | + | chr5_4:66976875-66976894 | None:intergenic | 45.0% | |
| CAAGTTCATATCGCGGGTAT+TGG | + | chr5_4:66976903-66976922 | None:intergenic | 45.0% | |
| GCTGTGCAAAGTGGAAATTC+CGG | + | chr5_4:66976950-66976969 | None:intergenic | 45.0% | |
| CCCCTTAAAGGAGGAGAAAA+AGG | - | chr5_4:66976983-66977002 | Msa0865790:intron | 45.0% | |
| !! | ATGATGCAAAGGCATCAAGC+AGG | + | chr5_4:66977354-66977373 | None:intergenic | 45.0% |
| !! | CTTCTTGGCTGTTGGTTCAA+TGG | - | chr5_4:66977413-66977432 | Msa0865790:intron | 45.0% |
| TGTTGGGTGGCAAAGAGAAA+AGG | - | chr5_4:66977570-66977589 | Msa0865790:intron | 45.0% | |
| ! | AAGGAGTACGACTTGGAAGT+TGG | + | chr5_4:66977850-66977869 | None:intergenic | 45.0% |
| ! | CAAGTTGAAGGAGTACGACT+TGG | + | chr5_4:66977857-66977876 | None:intergenic | 45.0% |
| GTATTGGAGGAGGATTTAGG+AGG | - | chr5_4:66977939-66977958 | Msa0865790:intron | 45.0% | |
| AACCCCTAAATGGAGCCTAA+TGG | - | chr5_4:66978108-66978127 | Msa0865790:CDS | 45.0% | |
| ! | AATGGAGCCTAATGGTTTGG+TGG | - | chr5_4:66978116-66978135 | Msa0865790:CDS | 45.0% |
| !! | ATGGAGCCTAATGGTTTGGT+GGG | - | chr5_4:66978117-66978136 | Msa0865790:CDS | 45.0% |
| ACACAACCCACCAAACCATT+AGG | + | chr5_4:66978126-66978145 | None:intergenic | 45.0% | |
| !! | TAATGGTTTGGTGGGTTGTG+TGG | - | chr5_4:66978125-66978144 | Msa0865790:CDS | 45.0% |
| GAGTGAAGACTTATCGAGTC+AGG | + | chr5_4:66978350-66978369 | None:intergenic | 45.0% | |
| CATTGACCCTCACATGCATA+TGG | + | chr5_4:66978464-66978483 | None:intergenic | 45.0% | |
| TAGCTTGGAAGGCTTCTGTT+GGG | + | chr5_4:66978559-66978578 | None:intergenic | 45.0% | |
| !! | AGCAAGACCAAGTACTGAGT+CGG | + | chr5_4:66978770-66978789 | None:intergenic | 45.0% |
| !! | ACTCAGTACTTGGTCTTGCT+TGG | - | chr5_4:66978770-66978789 | Msa0865790:intron | 45.0% |
| !! | ACTTGGTCTTGCTTGGAACA+AGG | - | chr5_4:66978777-66978796 | Msa0865790:intron | 45.0% |
| CTGACAAGCGAGTGAAGATT+TGG | - | chr5_4:66978964-66978983 | Msa0865790:intron | 45.0% | |
| CTTGAACCTGTGAGGATATG+TGG | + | chr5_4:66979328-66979347 | None:intergenic | 45.0% | |
| GCACAACAGATCCTTCTTAG+TGG | - | chr5_4:66979368-66979387 | Msa0865790:intron | 45.0% | |
| TGATGTAGAGAGCTTGGCAT+GGG | - | chr5_4:66979667-66979686 | Msa0865790:intron | 45.0% | |
| !! | ACAAAAGAGTGCTCAGTGTG+TGG | + | chr5_4:66979695-66979714 | None:intergenic | 45.0% |
| ! | ACACACTGAGCACTCTTTTG+TGG | - | chr5_4:66979694-66979713 | Msa0865790:intron | 45.0% |
| ! | CACTCTTTTGTGGTGCGTTA+TGG | - | chr5_4:66979704-66979723 | Msa0865790:intron | 45.0% |
| ATTCTGCACAGATGTGGCAT+TGG | + | chr5_4:66979994-66980013 | None:intergenic | 45.0% | |
| AGTAGCATTCTGCACAGATG+TGG | + | chr5_4:66980000-66980019 | None:intergenic | 45.0% | |
| GACACCATGTCAATAGGGTA+GGG | + | chr5_4:66980142-66980161 | None:intergenic | 45.0% | |
| TGACACCATGTCAATAGGGT+AGG | + | chr5_4:66980143-66980162 | None:intergenic | 45.0% | |
| CTGCATGACACCATGTCAAT+AGG | + | chr5_4:66980148-66980167 | None:intergenic | 45.0% | |
| ATCTGCAGCATTCGGTATAC+AGG | + | chr5_4:66980229-66980248 | None:intergenic | 45.0% | |
| GTATACCGAATGCTGCAGAT+TGG | - | chr5_4:66980229-66980248 | Msa0865790:intron | 45.0% | |
| GAGTTCCAATCTGCAGCATT+CGG | + | chr5_4:66980237-66980256 | None:intergenic | 45.0% | |
| AGAGGACAACCCATTCTTGT+TGG | - | chr5_4:66980505-66980524 | Msa0865790:intron | 45.0% | |
| CTCCGATAGCCAACAAGAAT+GGG | + | chr5_4:66980517-66980536 | None:intergenic | 45.0% | |
| TGGGACACCTTATCTGATGA+AGG | - | chr5_4:66980645-66980664 | Msa0865790:intron | 45.0% | |
| ACAGGAATCAACCTCAATCC+GGG | - | chr5_4:66980694-66980713 | Msa0865790:intron | 45.0% | |
| CAAACATTGTCTTCATGGGC+AGG | + | chr5_4:66980757-66980776 | None:intergenic | 45.0% | |
| CTGCCCATGAAGACAATGTT+TGG | - | chr5_4:66980755-66980774 | Msa0865790:intron | 45.0% | |
| AACTACAACGGTTGGGCATT+GGG | + | chr5_4:66981007-66981026 | None:intergenic | 45.0% | |
| CCATGCAATGACAAAAGGCA+AGG | + | chr5_4:66981070-66981089 | None:intergenic | 45.0% | |
| ! | CCTTGCCTTTTGTCATTGCA+TGG | - | chr5_4:66981067-66981086 | Msa0865790:CDS | 45.0% |
| TCCTGCCATGCAATGACAAA+AGG | + | chr5_4:66981075-66981094 | None:intergenic | 45.0% | |
| TCATTGCATGGCAGGAACAT+CGG | - | chr5_4:66981079-66981098 | Msa0865790:CDS | 45.0% | |
| !! | TATATAAAAAAAAATTCATA+AGG | + | chr5_4:66976337-66976356 | None:intergenic | 5.0% |
| !!! | TTTATTTTTTAAAATCTAAA+AGG | + | chr5_4:66978632-66978651 | None:intergenic | 5.0% |
| !! | TCATTATTATTATATTTAAT+AGG | + | chr5_4:66981230-66981249 | None:intergenic | 5.0% |
| TGTACACGATACGGTCAGAG+TGG | + | chr5_4:66973912-66973931 | None:intergenic | 50.0% | |
| GATTAACGGCCTGTTCGGAT+TGG | + | chr5_4:66974389-66974408 | None:intergenic | 50.0% | |
| CGAACAGGCCGTTAATCACT+TGG | - | chr5_4:66974392-66974411 | Msa0865790:CDS | 50.0% | |
| CAGCAGCGCCAAGTGATTAA+CGG | + | chr5_4:66974403-66974422 | None:intergenic | 50.0% | |
| GCACATGCTTTAACCGTAGC+TGG | - | chr5_4:66975010-66975029 | Msa0865790:CDS | 50.0% | |
| GTTGAGATCCTTCAAGGCGT+CGG | + | chr5_4:66975077-66975096 | None:intergenic | 50.0% | |
| CGCCTTGAAGGATCTCAACA+TGG | - | chr5_4:66975078-66975097 | Msa0865790:CDS | 50.0% | |
| !!! | ACTCTGCCGGTTTTATCCAG+TGG | - | chr5_4:66975182-66975201 | Msa0865790:intron | 50.0% |
| CTCACAAGTGATTACGCCAC+TGG | + | chr5_4:66975201-66975220 | None:intergenic | 50.0% | |
| CAGTGGCGTAATCACTTGTG+AGG | - | chr5_4:66975199-66975218 | Msa0865790:intron | 50.0% | |
| CTTAGACTTGCAAGCGAAGC+TGG | - | chr5_4:66975624-66975643 | Msa0865790:intron | 50.0% | |
| !! | CCAGAGTGTTGGTAAGGAGA+AGG | + | chr5_4:66976265-66976284 | None:intergenic | 50.0% |
| CCTTCTCCTTACCAACACTC+TGG | - | chr5_4:66976262-66976281 | Msa0865790:intron | 50.0% | |
| !! | GATGGTCCAGAGTGTTGGTA+AGG | + | chr5_4:66976271-66976290 | None:intergenic | 50.0% |
| ! | AAGGTGATGGTCCAGAGTGT+TGG | + | chr5_4:66976276-66976295 | None:intergenic | 50.0% |
| ! | TGTTGTTTGTGCGCGTACTG+AGG | - | chr5_4:66976724-66976743 | Msa0865790:intron | 50.0% |
| ACATGTTTATCTGCCCTGGC+AGG | - | chr5_4:66976859-66976878 | Msa0865790:intron | 50.0% | |
| TTTATCTGCCCTGGCAGGTA+TGG | - | chr5_4:66976864-66976883 | Msa0865790:intron | 50.0% | |
| CTCAAGTATCCATACCTGCC+AGG | + | chr5_4:66976876-66976895 | None:intergenic | 50.0% | |
| CTGGCAGGTATGGATACTTG+AGG | - | chr5_4:66976874-66976893 | Msa0865790:intron | 50.0% | |
| TCAAGCCATGCTGTGCAAAG+TGG | + | chr5_4:66976959-66976978 | None:intergenic | 50.0% | |
| TGGCTTGATTGCCCCCTTAA+AGG | - | chr5_4:66976971-66976990 | Msa0865790:intron | 50.0% | |
| CTTGATTGCCCCCTTAAAGG+AGG | - | chr5_4:66976974-66976993 | Msa0865790:intron | 50.0% | |
| ACAGGGAACTTCTTGGCTGT+TGG | - | chr5_4:66977405-66977424 | Msa0865790:intron | 50.0% | |
| TGATGAGGTAGAGCCATGTG+TGG | - | chr5_4:66977547-66977566 | Msa0865790:intron | 50.0% | |
| GTAGAGCCATGTGTGGTGTT+GGG | - | chr5_4:66977554-66977573 | Msa0865790:intron | 50.0% | |
| CAGCGAATCCAGAGCAAAAG+AGG | + | chr5_4:66977670-66977689 | None:intergenic | 50.0% | |
| CTAGCTTGGAAGGCTTCTGT+TGG | + | chr5_4:66978560-66978579 | None:intergenic | 50.0% | |
| !! | AGTCACACCGACTCAGTACT+TGG | - | chr5_4:66978760-66978779 | Msa0865790:intron | 50.0% |
| AGCAACTGCTTGAACCTGTG+AGG | + | chr5_4:66979336-66979355 | None:intergenic | 50.0% | |
| CACAGGTTCAAGCAGTTGCT+TGG | - | chr5_4:66979336-66979355 | Msa0865790:intron | 50.0% | |
| CACGTATAGCCAGAATGCGA+CGG | + | chr5_4:66979635-66979654 | None:intergenic | 50.0% | |
| ! | GCATTCTGGCTATACGTGGT+CGG | - | chr5_4:66979637-66979656 | Msa0865790:intron | 50.0% |
| CTGATGTAGAGAGCTTGGCA+TGG | - | chr5_4:66979666-66979685 | Msa0865790:intron | 50.0% | |
| CTAACGAGGGGAAGTTAGTG+TGG | + | chr5_4:66979815-66979834 | None:intergenic | 50.0% | |
| GCTTCTTGCGACTGGATCTA+TGG | - | chr5_4:66980167-66980186 | Msa0865790:intron | 50.0% | |
| !! | GAATGGGTTGTCCTCTGAGA+AGG | + | chr5_4:66980501-66980520 | None:intergenic | 50.0% |
| CCTCCGATAGCCAACAAGAA+TGG | + | chr5_4:66980518-66980537 | None:intergenic | 50.0% | |
| ! | CCATTCTTGTTGGCTATCGG+AGG | - | chr5_4:66980515-66980534 | Msa0865790:intron | 50.0% |
| TTGGCTATCGGAGGCTCAAA+GGG | - | chr5_4:66980524-66980543 | Msa0865790:intron | 50.0% | |
| CAGGAATCAACCTCAATCCG+GGG | - | chr5_4:66980695-66980714 | Msa0865790:intron | 50.0% | |
| TTATATCAGGCCCCGGATTG+AGG | + | chr5_4:66980708-66980727 | None:intergenic | 50.0% | |
| CAACTACAACGGTTGGGCAT+TGG | + | chr5_4:66981008-66981027 | None:intergenic | 50.0% | |
| ! | GCCTTTTGTCATTGCATGGC+AGG | - | chr5_4:66981071-66981090 | Msa0865790:CDS | 50.0% |
| ACACGATACGGTCAGAGTGG+TGG | + | chr5_4:66973909-66973928 | None:intergenic | 55.0% | |
| CACTCTGGACCATCACCTTC+TGG | - | chr5_4:66976277-66976296 | Msa0865790:CDS | 55.0% | |
| TCTGGACCATCACCTTCTGG+TGG | - | chr5_4:66976280-66976299 | Msa0865790:CDS | 55.0% | |
| CTGGACCATCACCTTCTGGT+GGG | - | chr5_4:66976281-66976300 | Msa0865790:CDS | 55.0% | |
| TGATGCCCACCAGAAGGTGA+TGG | + | chr5_4:66976289-66976308 | None:intergenic | 55.0% | |
| !! | GAGTACTGATGCCCACCAGA+AGG | + | chr5_4:66976295-66976314 | None:intergenic | 55.0% |
| GGCTTATCCAAACAGGGCCT+TGG | - | chr5_4:66976418-66976437 | Msa0865790:intron | 55.0% | |
| GGTAGAGCCATGTGTGGTGT+TGG | - | chr5_4:66977553-66977572 | Msa0865790:intron | 55.0% | |
| TTGCCACCCAACACCACACA+TGG | + | chr5_4:66977563-66977582 | None:intergenic | 55.0% | |
| TTTAGGGGTTGCGAGGGGAA+GGG | + | chr5_4:66978098-66978117 | None:intergenic | 55.0% | |
| ATTTAGGGGTTGCGAGGGGA+AGG | + | chr5_4:66978099-66978118 | None:intergenic | 55.0% | |
| TTCCCCTCGCAACCCCTAAA+TGG | - | chr5_4:66978098-66978117 | Msa0865790:CDS | 55.0% | |
| CTCCATTTAGGGGTTGCGAG+GGG | + | chr5_4:66978103-66978122 | None:intergenic | 55.0% | |
| GCTCCATTTAGGGGTTGCGA+GGG | + | chr5_4:66978104-66978123 | None:intergenic | 55.0% | |
| ! | CGTCGCATTCTGGCTATACG+TGG | - | chr5_4:66979633-66979652 | Msa0865790:intron | 55.0% |
| !! | CAGCGCTGATGTAGAGAGCT+TGG | - | chr5_4:66979661-66979680 | Msa0865790:intron | 55.0% |
| GTCATGCAGCTTCTTGCGAC+TGG | - | chr5_4:66980159-66980178 | Msa0865790:intron | 55.0% | |
| GTTGGCTATCGGAGGCTCAA+AGG | - | chr5_4:66980523-66980542 | Msa0865790:intron | 55.0% | |
| !! | ACAACGGTTGGGCATTGGGA+AGG | + | chr5_4:66981003-66981022 | None:intergenic | 55.0% |
| TTCTTCTTCTCTCGCGCCCC+CGG | - | chr5_4:66973856-66973875 | Msa0865790:three_prime_UTR | 60.0% | |
| ACAATACCGCCGCACCGTTC+CGG | - | chr5_4:66973881-66973900 | Msa0865790:three_prime_UTR | 60.0% | |
| ! | TCAGAGTGGTGGTGCCGGAA+CGG | + | chr5_4:66973898-66973917 | None:intergenic | 60.0% |
| ! | TACGGTCAGAGTGGTGGTGC+CGG | + | chr5_4:66973903-66973922 | None:intergenic | 60.0% |
| ! | GAGCCATGTGTGGTGTTGGG+TGG | - | chr5_4:66977557-66977576 | Msa0865790:intron | 60.0% |
| !! | AGGGAGGGCTTTGGGAGGAA+GGG | + | chr5_4:66978074-66978093 | None:intergenic | 60.0% |
| !! | AAGGGAGGGCTTTGGGAGGA+AGG | + | chr5_4:66978075-66978094 | None:intergenic | 60.0% |
| GGAAGGGAAGGGAGGGCTTT+GGG | + | chr5_4:66978082-66978101 | None:intergenic | 60.0% | |
| GGCTCCATTTAGGGGTTGCG+AGG | + | chr5_4:66978105-66978124 | None:intergenic | 60.0% | |
| GTAAGGACGCCGTCGCATTC+TGG | - | chr5_4:66979623-66979642 | Msa0865790:intron | 60.0% | |
| TGCGGCGGTATTGTTGCCGG+GGG | + | chr5_4:66973875-66973894 | None:intergenic | 65.0% | |
| GTGCGGCGGTATTGTTGCCG+GGG | + | chr5_4:66973876-66973895 | None:intergenic | 65.0% | |
| GGTGCGGCGGTATTGTTGCC+GGG | + | chr5_4:66973877-66973896 | None:intergenic | 65.0% | |
| CGGTGCGGCGGTATTGTTGC+CGG | + | chr5_4:66973878-66973897 | None:intergenic | 65.0% | |
| !! | AGGGAAGGGAGGGCTTTGGG+AGG | + | chr5_4:66978079-66978098 | None:intergenic | 65.0% |
| GGGAAGGGAAGGGAGGGCTT+TGG | + | chr5_4:66978083-66978102 | None:intergenic | 65.0% | |
| TGCGAGGGGAAGGGAAGGGA+GGG | + | chr5_4:66978089-66978108 | None:intergenic | 65.0% | |
| TTGCGAGGGGAAGGGAAGGG+AGG | + | chr5_4:66978090-66978109 | None:intergenic | 65.0% | |
| GGGTTGCGAGGGGAAGGGAA+GGG | + | chr5_4:66978093-66978112 | None:intergenic | 65.0% | |
| ! | GTGGTGGTGCCGGAACGGTG+CGG | + | chr5_4:66973893-66973912 | None:intergenic | 70.0% |
| GGGGTTGCGAGGGGAAGGGA+AGG | + | chr5_4:66978094-66978113 | None:intergenic | 70.0% | |
| ! | GTGGTGCCGGAACGGTGCGG+CGG | + | chr5_4:66973890-66973909 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 66973827 | 66981250 | 66973827 | ID=Msa0865790;Name=Msa0865790 |
| chr5_4 | mRNA | 66973827 | 66981250 | 66973827 | ID=Msa0865790-mRNA-1;Parent=Msa0865790;Name=Msa0865790-mRNA-1;_AED=0.08;_eAED=0.08;_QI=113|1|1|1|1|1|16|528|485 |
| chr5_4 | exon | 66973827 | 66974435 | 66973827 | ID=Msa0865790-mRNA-1:exon:21095;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66974521 | 66974598 | 66974521 | ID=Msa0865790-mRNA-1:exon:21094;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66974728 | 66974790 | 66974728 | ID=Msa0865790-mRNA-1:exon:21093;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66974880 | 66974909 | 66974880 | ID=Msa0865790-mRNA-1:exon:21092;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66974995 | 66975138 | 66974995 | ID=Msa0865790-mRNA-1:exon:21091;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66975362 | 66975460 | 66975362 | ID=Msa0865790-mRNA-1:exon:21090;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66975662 | 66975736 | 66975662 | ID=Msa0865790-mRNA-1:exon:21089;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66976040 | 66976136 | 66976040 | ID=Msa0865790-mRNA-1:exon:21088;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66976271 | 66976341 | 66976271 | ID=Msa0865790-mRNA-1:exon:21087;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66977461 | 66977532 | 66977461 | ID=Msa0865790-mRNA-1:exon:21086;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66977610 | 66977668 | 66977610 | ID=Msa0865790-mRNA-1:exon:21085;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66978073 | 66978196 | 66978073 | ID=Msa0865790-mRNA-1:exon:21084;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66978311 | 66978409 | 66978311 | ID=Msa0865790-mRNA-1:exon:21083;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66978495 | 66978574 | 66978495 | ID=Msa0865790-mRNA-1:exon:21082;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66979950 | 66980122 | 66979950 | ID=Msa0865790-mRNA-1:exon:21081;Parent=Msa0865790-mRNA-1 |
| chr5_4 | exon | 66981025 | 66981250 | 66981025 | ID=Msa0865790-mRNA-1:exon:21080;Parent=Msa0865790-mRNA-1 |
| chr5_4 | five_prime_UTR | 66981138 | 66981250 | 66981138 | ID=Msa0865790-mRNA-1:five_prime_utr;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66981025 | 66981137 | 66981025 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66979950 | 66980122 | 66979950 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66978495 | 66978574 | 66978495 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66978311 | 66978409 | 66978311 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66978073 | 66978196 | 66978073 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66977610 | 66977668 | 66977610 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66977461 | 66977532 | 66977461 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66976271 | 66976341 | 66976271 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66976040 | 66976136 | 66976040 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66975662 | 66975736 | 66975662 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66975362 | 66975460 | 66975362 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66974995 | 66975138 | 66974995 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66974880 | 66974909 | 66974880 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66974728 | 66974790 | 66974728 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66974521 | 66974598 | 66974521 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | CDS | 66974355 | 66974435 | 66974355 | ID=Msa0865790-mRNA-1:cds;Parent=Msa0865790-mRNA-1 |
| chr5_4 | three_prime_UTR | 66973827 | 66974354 | 66973827 | ID=Msa0865790-mRNA-1:three_prime_utr;Parent=Msa0865790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
