Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831960 | XP_003610663.1 | 95.923 | 466 | 19 | 0 | 1 | 466 | 1 | 466 | 0.0 | 906 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831960 | sp|O50046|TRPB_CAMAC | 62.500 | 400 | 142 | 4 | 61 | 457 | 62 | 456 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831960 | G7K113 | 95.923 | 466 | 19 | 0 | 1 | 466 | 1 | 466 | 0.0 | 906 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0711330 | Msa0831960 | 0.971567 | 2.290387e-133 | -8.615850e-47 |
| Msa0751780 | Msa0831960 | 0.946637 | 3.153850e-105 | -8.615850e-47 |
| Msa0831960 | Msa1378850 | 0.984735 | 1.973550e-161 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831960 | MtrunA17_Chr5g0394121 | 95.923 | 466 | 19 | 0 | 1 | 466 | 1 | 466 | 0.0 | 906 |
| Msa0831960 | MtrunA17_Chr3g0098621 | 64.631 | 393 | 134 | 3 | 68 | 457 | 12 | 402 | 0.0 | 534 |
| Msa0831960 | MtrunA17_Chr3g0097941 | 61.220 | 410 | 152 | 4 | 55 | 461 | 55 | 460 | 0.0 | 529 |
| Msa0831960 | MtrunA17_Chr6g0456431 | 27.679 | 336 | 194 | 9 | 123 | 430 | 124 | 438 | 2.47e-19 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831960 | AT5G28237.1 | 60.860 | 465 | 172 | 4 | 1 | 463 | 1 | 457 | 0.0 | 560 |
| Msa0831960 | AT5G54810.1 | 58.409 | 440 | 162 | 5 | 41 | 461 | 27 | 464 | 0.0 | 523 |
| Msa0831960 | AT4G27070.1 | 62.694 | 386 | 139 | 3 | 75 | 457 | 82 | 465 | 0.0 | 519 |
| Msa0831960 | AT5G28237.2 | 58.711 | 419 | 164 | 3 | 1 | 417 | 1 | 412 | 7.94e-172 | 490 |
| Msa0831960 | AT5G38530.1 | 27.492 | 331 | 201 | 8 | 123 | 430 | 130 | 444 | 4.85e-19 | 90.1 |
Find 149 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGAGTGCACGGTCTTTA+TGG | 0.214615 | 5_4:+5080697 | Msa0831960:CDS |
| TCCTTTGGATACAATTTATA+TGG | 0.214819 | 5_4:-5084034 | None:intergenic |
| GGTTACTCGTGATAAGTTTA+AGG | 0.215974 | 5_4:+5079769 | Msa0831960:CDS |
| ACCACTTCTACTGGAAAATT+TGG | 0.233335 | 5_4:+5079887 | Msa0831960:CDS |
| GGAGTTGAAGCTGCTGGTTT+AGG | 0.247180 | 5_4:+5082576 | Msa0831960:CDS |
| CACCGCAGAGTTACGCTCTT+TGG | 0.262865 | 5_4:-5079735 | None:intergenic |
| AAGCACATTACAAGTGTTTC+TGG | 0.272299 | 5_4:-5079932 | None:intergenic |
| TTTACCAAACGACAACATTA+AGG | 0.283769 | 5_4:+5083928 | Msa0831960:CDS |
| GGAACAGGTTCAAATGCTTT+AGG | 0.299421 | 5_4:+5082510 | Msa0831960:CDS |
| GAGTTGAAGCTGCTGGTTTA+GGG | 0.305218 | 5_4:+5082577 | Msa0831960:CDS |
| ACTGGAAAATTTGGTAGGTT+TGG | 0.314647 | 5_4:+5079896 | Msa0831960:CDS |
| CTGCACGCCCACTTTCTTTG+TGG | 0.315424 | 5_4:-5083471 | None:intergenic |
| CTTACAACCACTTCTACAAT+AGG | 0.315989 | 5_4:+5079346 | Msa0831960:five_prime_UTR |
| CCAGTAGAAGTGGTATCTTC+TGG | 0.317907 | 5_4:-5079878 | None:intergenic |
| CACTTTGGCCAAAGGAGAAA+TGG | 0.320799 | 5_4:+5082623 | Msa0831960:CDS |
| GTCATTACGGCCACCGGTTC+AGG | 0.323596 | 5_4:+5080632 | Msa0831960:CDS |
| GACCACCAAGTATAAATAAA+AGG | 0.327114 | 5_4:+5079538 | Msa0831960:five_prime_UTR |
| TGGTATAATAGTTCATAGTT+AGG | 0.352582 | 5_4:-5079279 | None:intergenic |
| ATGTAGGTTGAAGCTGTAAA+TGG | 0.356386 | 5_4:+5082285 | Msa0831960:intron |
| CGTGAATTTCAGTCGGTGAT+TGG | 0.356593 | 5_4:+5082420 | Msa0831960:CDS |
| TTCTGTGGCTTTCTCAATCA+AGG | 0.358837 | 5_4:-5079843 | None:intergenic |
| TGATTGTCTGTCCATGTCTT+TGG | 0.364123 | 5_4:-5080723 | None:intergenic |
| ATAAACACCCATTTCTCCTT+TGG | 0.365617 | 5_4:-5082631 | None:intergenic |
| TCATCTTGTGAGAGCCAGTA+TGG | 0.367051 | 5_4:-5080559 | None:intergenic |
| GTACGGTTGATGAAGCTCTT+AGG | 0.375053 | 5_4:+5080752 | Msa0831960:CDS |
| CCTACTGTACTTGTTTGAAT+AGG | 0.380777 | 5_4:+5084622 | Msa0831960:three_prime_UTR |
| GTACGAGAGATTATGCAAAT+TGG | 0.385327 | 5_4:+5083841 | Msa0831960:CDS |
| ACCGCAGAGTTACGCTCTTT+GGG | 0.385722 | 5_4:-5079734 | None:intergenic |
| GACACAGATGTGAGATTGAT+TGG | 0.387117 | 5_4:+5082555 | Msa0831960:CDS |
| TACTTGGTGGTCGACGCAAC+TGG | 0.389594 | 5_4:-5079527 | None:intergenic |
| TCGCTGTTGGGTTGGAGACT+TGG | 0.396871 | 5_4:+5082338 | Msa0831960:CDS |
| ACAGCATTAAGAGACTATAT+TGG | 0.410677 | 5_4:+5080434 | Msa0831960:CDS |
| GACATTATTGTTGCAAGTGT+TGG | 0.413780 | 5_4:+5082489 | Msa0831960:CDS |
| ACAACATAACATACGATAAG+AGG | 0.414036 | 5_4:+5079588 | Msa0831960:five_prime_UTR |
| TGCATGCGCAAAACTTGCTT+TGG | 0.418487 | 5_4:+5080679 | Msa0831960:CDS |
| TGGAGGCGTGTTAGACTGTT+TGG | 0.420497 | 5_4:-5079507 | None:intergenic |
| ATCACCATCTTGCAATAAAT+AGG | 0.421091 | 5_4:-5082667 | None:intergenic |
| GTGAATTTCAGTCGGTGATT+GGG | 0.424558 | 5_4:+5082421 | Msa0831960:CDS |
| GGTATAATAGTTCATAGTTA+GGG | 0.426437 | 5_4:-5079278 | None:intergenic |
| ACCGATGAAGAAGCTCTTGA+TGG | 0.431720 | 5_4:+5083508 | Msa0831960:CDS |
| CTCAACTCTGGACCAACTCC+TGG | 0.438434 | 5_4:-5083445 | None:intergenic |
| ACAACCTTAATGTTGTCGTT+TGG | 0.444640 | 5_4:-5083932 | None:intergenic |
| ATTGTTGCAAGTGTTGGAAC+AGG | 0.446515 | 5_4:+5082495 | Msa0831960:CDS |
| GAAAACAGCTACCACTTGTC+AGG | 0.455616 | 5_4:+5082360 | Msa0831960:CDS |
| GGAAAATTTGGTAGGTTTGG+AGG | 0.456684 | 5_4:+5079899 | Msa0831960:CDS |
| ATTGGCTATATTAGATAAGC+TGG | 0.461016 | 5_4:+5083898 | Msa0831960:CDS |
| TGCTTAACCCACGTCAAAGA+TGG | 0.462671 | 5_4:+5079477 | Msa0831960:five_prime_UTR |
| ATGTTGTCGTTTGGTAAAGT+AGG | 0.462906 | 5_4:-5083923 | None:intergenic |
| AGAGAGGATCTAAACCATAC+TGG | 0.468188 | 5_4:+5080545 | Msa0831960:CDS |
| GAACCTCACTCCATTGCAGC+TGG | 0.468797 | 5_4:+5082702 | Msa0831960:CDS |
| CCAGAAGATACCACTTCTAC+TGG | 0.470024 | 5_4:+5079878 | Msa0831960:CDS |
| TGGAAAACATTCTTCCACTT+TGG | 0.473305 | 5_4:+5082608 | Msa0831960:CDS |
| TTATGTCACGTGTAAATTTG+CGG | 0.473605 | 5_4:+5079402 | Msa0831960:five_prime_UTR |
| CTAATTTACATGGCGGAGCT+AGG | 0.473645 | 5_4:-5079454 | None:intergenic |
| GTATATGTAGTGGCTAATTG+AGG | 0.478553 | 5_4:-5079800 | None:intergenic |
| ATCTCCTATTTATTGCAAGA+TGG | 0.482125 | 5_4:+5082663 | Msa0831960:CDS |
| TATTTATTGCAAGATGGTGA+TGG | 0.487590 | 5_4:+5082669 | Msa0831960:CDS |
| ACTTTGGCCAAAGGAGAAAT+GGG | 0.488098 | 5_4:+5082624 | Msa0831960:CDS |
| TAAATTGTATCCAAAGGAAA+AGG | 0.488617 | 5_4:+5084039 | Msa0831960:three_prime_UTR |
| CTTCTACTGGAAAATTTGGT+AGG | 0.489001 | 5_4:+5079891 | Msa0831960:CDS |
| GCTGGTTTAGGGTTAGATAG+TGG | 0.489960 | 5_4:+5082588 | Msa0831960:CDS |
| GAGCATTACAAAAGCAAGAA+TGG | 0.491569 | 5_4:+5080494 | Msa0831960:CDS |
| CATTTCTCCTTTGGCCAAAG+TGG | 0.494631 | 5_4:-5082622 | None:intergenic |
| TTACAACCACTTCTACAATA+GGG | 0.494819 | 5_4:+5079347 | Msa0831960:five_prime_UTR |
| CATTCTTCCACTTTGGCCAA+AGG | 0.495954 | 5_4:+5082615 | Msa0831960:CDS |
| ACACTTGCAACAATAATGTC+TGG | 0.497623 | 5_4:-5082486 | None:intergenic |
| ATTATGCCCTATTGTAGAAG+TGG | 0.508895 | 5_4:-5079353 | None:intergenic |
| TTGAGTTTCCACAAAGAAAG+TGG | 0.510284 | 5_4:+5083463 | Msa0831960:CDS |
| GCCACCGGTTCAGGACATCA+TGG | 0.514927 | 5_4:+5080641 | Msa0831960:CDS |
| TGGCTCTACAATAATTTCTG+TGG | 0.515208 | 5_4:-5079858 | None:intergenic |
| GCTTAACCCACGTCAAAGAT+GGG | 0.518154 | 5_4:+5079478 | Msa0831960:five_prime_UTR |
| AAGGTTGTTGTAAATTGTAG+TGG | 0.521105 | 5_4:+5083947 | Msa0831960:CDS |
| TTGATTGGAGTTGAAGCTGC+TGG | 0.521751 | 5_4:+5082570 | Msa0831960:CDS |
| GAAAATTTGGTAGGTTTGGA+GGG | 0.522358 | 5_4:+5079900 | Msa0831960:CDS |
| TCTTTGTGGAAACTCAACTC+TGG | 0.527612 | 5_4:-5083457 | None:intergenic |
| AAAAGCAAGAATGGTGGGAA+AGG | 0.530194 | 5_4:+5080503 | Msa0831960:CDS |
| AAAGCAAGAATGGTGGGAAA+GGG | 0.533130 | 5_4:+5080504 | Msa0831960:CDS |
| CAAGGGTATTGTGGAAGGCA+AGG | 0.533424 | 5_4:-5079825 | None:intergenic |
| GGAGAAATGGGTGTTTATCA+TGG | 0.535396 | 5_4:+5082636 | Msa0831960:CDS |
| ACAAGTGATTGTAACTTGAA+TGG | 0.535469 | 5_4:-5079299 | None:intergenic |
| CGAGAGATTATGCAAATTGG+AGG | 0.535793 | 5_4:+5083844 | Msa0831960:CDS |
| TCCATATAAATTGTATCCAA+AGG | 0.547106 | 5_4:+5084033 | Msa0831960:three_prime_UTR |
| GGGTTAAGCACTAATTTACA+TGG | 0.548029 | 5_4:-5079464 | None:intergenic |
| CACTTGTCAGGTTCAGCGGT+GGG | 0.551258 | 5_4:+5082372 | Msa0831960:CDS |
| TGATTCCAAAGTACAAACTC+AGG | 0.551285 | 5_4:-5084649 | None:intergenic |
| TTGTACCCCATCTTTGACGT+GGG | 0.553814 | 5_4:-5079484 | None:intergenic |
| CTTTATGGCTGCCAAAGACA+TGG | 0.556703 | 5_4:+5080712 | Msa0831960:CDS |
| AAAAGTGTCATTACGGCCAC+CGG | 0.557084 | 5_4:+5080626 | Msa0831960:CDS |
| AAGCCCATGATGTCCTGAAC+CGG | 0.557178 | 5_4:-5080645 | None:intergenic |
| CTGTGTCTGATAGAAACTCA+TGG | 0.558634 | 5_4:-5082539 | None:intergenic |
| TCTGTGGCTTTCTCAATCAA+GGG | 0.563729 | 5_4:-5079842 | None:intergenic |
| TTTCTCAATCAAGGGTATTG+TGG | 0.563983 | 5_4:-5079834 | None:intergenic |
| TCTAGAGGCAGCACATGCAT+TGG | 0.564224 | 5_4:+5083880 | Msa0831960:CDS |
| TATATGTAGTGGCTAATTGA+GGG | 0.565294 | 5_4:-5079799 | None:intergenic |
| GCATGTGCTGCCTCTAGAGA+TGG | 0.565495 | 5_4:-5083875 | None:intergenic |
| CCACCGGTTCAGGACATCAT+GGG | 0.569455 | 5_4:+5080642 | Msa0831960:CDS |
| TCAATCAAGGGTATTGTGGA+AGG | 0.569510 | 5_4:-5079830 | None:intergenic |
| GATGAAGCTCTTAGGAGCTA+AGG | 0.571020 | 5_4:+5080760 | Msa0831960:CDS |
| CTCTGCGGTGGTTCAAGCAG+TGG | 0.574183 | 5_4:+5079748 | Msa0831960:CDS |
| AAAACTTGCTTTGGAGTGCA+CGG | 0.574611 | 5_4:+5080688 | Msa0831960:CDS |
| AACCTCACTCCATTGCAGCT+GGG | 0.576151 | 5_4:+5082703 | Msa0831960:CDS |
| GTTGTACCCCATCTTTGACG+TGG | 0.581554 | 5_4:-5079485 | None:intergenic |
| CGGTGATTGGGAAAGAAACA+AGG | 0.584635 | 5_4:+5082433 | Msa0831960:CDS |
| AGGATGGAGTACCCAGGAGT+TGG | 0.585909 | 5_4:+5083433 | Msa0831960:intron |
| ACCATCAAGAGCTTCTTCAT+CGG | 0.586467 | 5_4:-5083509 | None:intergenic |
| AAGAAACAAGGAAACAAGCA+TGG | 0.587611 | 5_4:+5082445 | Msa0831960:CDS |
| AAGGGTATTGTGGAAGGCAA+GGG | 0.587691 | 5_4:-5079824 | None:intergenic |
| TGAAATTCACGTACCATGGT+AGG | 0.591953 | 5_4:-5082408 | None:intergenic |
| CCACTTGTCAGGTTCAGCGG+TGG | 0.592505 | 5_4:+5082371 | Msa0831960:CDS |
| GCTATGATTGCCAAGCGCAT+CGG | 0.597909 | 5_4:+5080599 | Msa0831960:CDS |
| ATTACAAAAGCAAGAATGGT+GGG | 0.599564 | 5_4:+5080498 | Msa0831960:CDS |
| TGTGACTTACCCAGCTGCAA+TGG | 0.601635 | 5_4:-5082712 | None:intergenic |
| CTACCACTTGTCAGGTTCAG+CGG | 0.602899 | 5_4:+5082368 | Msa0831960:CDS |
| TCAACTCTGGACCAACTCCT+GGG | 0.607704 | 5_4:-5083444 | None:intergenic |
| CACCACTGTATCATGCTCAA+AGG | 0.607867 | 5_4:+5080465 | Msa0831960:CDS |
| TGAGTTTCCACAAAGAAAGT+GGG | 0.608742 | 5_4:+5083464 | Msa0831960:CDS |
| CCCATGATGTCCTGAACCGG+TGG | 0.609306 | 5_4:-5080642 | None:intergenic |
| GATTCCAAAGTACAAACTCA+GGG | 0.610136 | 5_4:-5084648 | None:intergenic |
| TTTCAAAGATGCATCATCAG+AGG | 0.611931 | 5_4:+5082311 | Msa0831960:CDS |
| ACAGACAATCATCTAATGTA+CGG | 0.615143 | 5_4:+5080735 | Msa0831960:CDS |
| CGACTGAAATTCACGTACCA+TGG | 0.615376 | 5_4:-5082412 | None:intergenic |
| CCTATTCAAACAAGTACAGT+AGG | 0.619136 | 5_4:-5084622 | None:intergenic |
| TGTACCTTGCAATTTACATG+CGG | 0.629082 | 5_4:-5079675 | None:intergenic |
| TACCCAGCTGCAATGGAGTG+AGG | 0.630521 | 5_4:-5082705 | None:intergenic |
| AGGCAAGGGTGTATATGTAG+TGG | 0.631568 | 5_4:-5079810 | None:intergenic |
| GGGTATATTTCCATCTCTAG+AGG | 0.631579 | 5_4:+5083865 | Msa0831960:CDS |
| TGATATATACTTGAAAAGAG+AGG | 0.635009 | 5_4:+5080529 | Msa0831960:CDS |
| GTTGTAAATTGTAGTGGACG+TGG | 0.635806 | 5_4:+5083953 | Msa0831960:CDS |
| TCACGTACCATGGTAGGACA+TGG | 0.639647 | 5_4:-5082402 | None:intergenic |
| GTATAATAGTTCATAGTTAG+GGG | 0.642332 | 5_4:-5079277 | None:intergenic |
| ACCACATCCATGTCCTACCA+TGG | 0.651627 | 5_4:+5082395 | Msa0831960:CDS |
| CAAAGAGCGTAACTCTGCGG+TGG | 0.651817 | 5_4:+5079736 | Msa0831960:CDS |
| ACCATGGTAGGACATGGATG+TGG | 0.654355 | 5_4:-5082396 | None:intergenic |
| TTCCAAAGTACAAACTCAGG+GGG | 0.657706 | 5_4:-5084646 | None:intergenic |
| CATTACAAAAGCAAGAATGG+TGG | 0.664051 | 5_4:+5080497 | Msa0831960:CDS |
| ATGGCCGCATGTAAATTGCA+AGG | 0.666722 | 5_4:+5079671 | Msa0831960:CDS |
| CATGGTACGTGAATTTCAGT+CGG | 0.668535 | 5_4:+5082413 | Msa0831960:CDS |
| CCACCGCTGAACCTGACAAG+TGG | 0.669141 | 5_4:-5082371 | None:intergenic |
| ATTCAAACAAGTACAGTAGG+TGG | 0.670624 | 5_4:-5084619 | None:intergenic |
| TTGGTGGTCGACGCAACTGG+AGG | 0.671260 | 5_4:-5079524 | None:intergenic |
| GAGAGATTATGCAAATTGGA+GGG | 0.672303 | 5_4:+5083845 | Msa0831960:CDS |
| CTTAACCCACGTCAAAGATG+GGG | 0.673677 | 5_4:+5079479 | Msa0831960:five_prime_UTR |
| ATTTACAGGATGGAGTACCC+AGG | 0.682078 | 5_4:+5083427 | Msa0831960:intron |
| GCCCAAAGAGCGTAACTCTG+CGG | 0.693803 | 5_4:+5079733 | Msa0831960:CDS |
| AACCTTTGAGCATGATACAG+TGG | 0.716295 | 5_4:-5080467 | None:intergenic |
| TGGACGTGGAGACAAAGATG+CGG | 0.727021 | 5_4:+5083967 | Msa0831960:CDS |
| ATTCCAAAGTACAAACTCAG+GGG | 0.737228 | 5_4:-5084647 | None:intergenic |
| TCCAAAGTACAAACTCAGGG+GGG | 0.738584 | 5_4:-5084645 | None:intergenic |
| TTAAGCACTAATTTACATGG+CGG | 0.742022 | 5_4:-5079461 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATCAGTATATAATT+TGG | + | chr5_4:5080125-5080144 | Msa0831960:intron | 10.0% |
| !!! | TTGAAAAGAATTTTTTTTAA+GGG | - | chr5_4:5080256-5080275 | None:intergenic | 10.0% |
| !!! | TTTGAAAAGAATTTTTTTTA+AGG | - | chr5_4:5080257-5080276 | None:intergenic | 10.0% |
| !! | TGTTCAATAATTAAAATTAA+AGG | - | chr5_4:5080803-5080822 | None:intergenic | 10.0% |
| !! | ATTAAACTTATTGTAAAAAA+TGG | - | chr5_4:5080902-5080921 | None:intergenic | 10.0% |
| !!! | ATAAAATTGATAACAATTAT+TGG | - | chr5_4:5082738-5082757 | None:intergenic | 10.0% |
| !!! | TATTAAATAGTTTAATTTAG+AGG | + | chr5_4:5083072-5083091 | Msa0831960:intron | 10.0% |
| !!! | ATTAAATAGTTTAATTTAGA+GGG | + | chr5_4:5083073-5083092 | Msa0831960:intron | 10.0% |
| !!! | TATATACACAAATTTTTATT+TGG | - | chr5_4:5083306-5083325 | None:intergenic | 10.0% |
| !!! | TATAATATTTTGAATTTTTC+TGG | + | chr5_4:5084417-5084436 | Msa0831960:intron | 10.0% |
| !! | TTAAATTAATTTCAAGATAC+TGG | - | chr5_4:5080101-5080120 | None:intergenic | 15.0% |
| !!! | AAAAATTATTGGATTCTTTT+AGG | - | chr5_4:5080840-5080859 | None:intergenic | 15.0% |
| !! | TTTAACATTCTCATTTAATT+TGG | - | chr5_4:5081645-5081664 | None:intergenic | 15.0% |
| !! | AATTAAATGAGAATGTTAAA+CGG | + | chr5_4:5081645-5081664 | Msa0831960:intron | 15.0% |
| !! | AATTACTTGATCAAAAATAA+CGG | + | chr5_4:5081730-5081749 | Msa0831960:intron | 15.0% |
| !! | TAATTAAATTGAAATAGGAT+AGG | - | chr5_4:5082871-5082890 | None:intergenic | 15.0% |
| !! | ATCACTAATTAAATTGAAAT+AGG | - | chr5_4:5082876-5082895 | None:intergenic | 15.0% |
| !!! | TATATGCACAAATTTTTATT+TGG | - | chr5_4:5083235-5083254 | None:intergenic | 15.0% |
| !!! | AATTTTTATTTGGAAAAAGT+TGG | - | chr5_4:5083296-5083315 | None:intergenic | 15.0% |
| !! | AATGATTTAATAAACAATCA+TGG | + | chr5_4:5083366-5083385 | Msa0831960:intron | 15.0% |
| !!! | TTTTTTAATTATTTACAGGA+TGG | + | chr5_4:5083417-5083436 | Msa0831960:intron | 15.0% |
| !!! | TTTTTATTTGTCAAAAACAA+TGG | - | chr5_4:5083706-5083725 | None:intergenic | 15.0% |
| !! | ATTAAGCTTAAATATCTAAA+AGG | + | chr5_4:5084083-5084102 | Msa0831960:intron | 15.0% |
| !! | TTAAGCTTAAATATCTAAAA+GGG | + | chr5_4:5084084-5084103 | Msa0831960:intron | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr5_4:5084187-5084206 | None:intergenic | 15.0% |
| !!! | AAATTTTCAATCTTCATTTT+TGG | - | chr5_4:5084497-5084516 | None:intergenic | 15.0% |
| !!! | ATGAAGATTGAAAATTTTAT+AGG | + | chr5_4:5084500-5084519 | Msa0831960:intron | 15.0% |
| !!! | TGAAGATTGAAAATTTTATA+GGG | + | chr5_4:5084501-5084520 | Msa0831960:intron | 15.0% |
| !!! | TTCAGGTAATTTTGTTAATT+AGG | + | chr5_4:5080002-5080021 | Msa0831960:intron | 20.0% |
| !!! | AATTTTGTTAATTAGGATGA+AGG | + | chr5_4:5080009-5080028 | Msa0831960:intron | 20.0% |
| !!! | TTATGTTATTTGATAGTTTG+AGG | - | chr5_4:5080384-5080403 | None:intergenic | 20.0% |
| !! | ATAGCCATTCAAAATTTATT+TGG | + | chr5_4:5081007-5081026 | Msa0831960:intron | 20.0% |
| !! | AATGTCTTTATCTTTATGTT+TGG | - | chr5_4:5082188-5082207 | None:intergenic | 20.0% |
| !! | AATAATGTATGTAAACATGT+AGG | + | chr5_4:5082269-5082288 | Msa0831960:intron | 20.0% |
| !!! | GTAATGTCTATGTTTTAATT+AGG | - | chr5_4:5083549-5083568 | None:intergenic | 20.0% |
| !! | AATAAAAAGTGAGAAAAACA+AGG | + | chr5_4:5083718-5083737 | Msa0831960:intron | 20.0% |
| !!! | AAAAGGGTTAAATATGTTTT+TGG | + | chr5_4:5084100-5084119 | Msa0831960:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | - | chr5_4:5084561-5084580 | None:intergenic | 20.0% |
| !!! | AGTTGAAGGAAAATTTTATA+GGG | - | chr5_4:5084158-5084177 | None:intergenic | 20.0% |
| !!! | AAGTTGAAGGAAAATTTTAT+AGG | - | chr5_4:5084159-5084178 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr5_4:5084188-5084207 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr5_4:5084191-5084210 | Msa0831960:intron | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr5_4:5084469-5084488 | Msa0831960:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr5_4:5084470-5084489 | Msa0831960:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | + | chr5_4:5084561-5084580 | Msa0831960:intron | 20.0% |
| !! | AAAAATTAAACAACTCACAA+AGG | - | chr5_4:5084718-5084737 | None:intergenic | 20.0% |
| !!! | AAGTGGTTGTAAGTTTTTTT+AGG | - | chr5_4:5079339-5079358 | None:intergenic | 25.0% |
| ! | AAAAAACACAAACACAAACA+TGG | + | chr5_4:5079652-5079671 | Msa0831960:exon | 25.0% |
| ! | AAGCCAATTCATAGAAAAAA+AGG | + | chr5_4:5079706-5079725 | Msa0831960:CDS | 25.0% |
| !!! | CTACCTTTTTTTCTATGAAT+TGG | - | chr5_4:5079712-5079731 | None:intergenic | 25.0% |
| ! | AACAAGTGATTAAACTCTAT+TGG | - | chr5_4:5080175-5080194 | None:intergenic | 25.0% |
| ! | ATAAAAATAATTGTTCCCAC+AGG | + | chr5_4:5080400-5080419 | Msa0831960:intron | 25.0% |
| !!! | TCTCTTTTCAAGTATATATC+AGG | - | chr5_4:5080530-5080549 | None:intergenic | 25.0% |
| ! | TGATATATACTTGAAAAGAG+AGG | + | chr5_4:5080529-5080548 | Msa0831960:CDS | 25.0% |
| !!! | ATTATTGGATTCTTTTAGGT+AGG | - | chr5_4:5080836-5080855 | None:intergenic | 25.0% |
| ! | AAAATGGAGAAGACAATTAT+TGG | - | chr5_4:5080886-5080905 | None:intergenic | 25.0% |
| ! | TGAAAAAATCGTGTAAAATG+AGG | - | chr5_4:5080933-5080952 | None:intergenic | 25.0% |
| !!! | TCCTCAATCATTGTTTTATT+TGG | + | chr5_4:5080954-5080973 | Msa0831960:intron | 25.0% |
| ! | TTTATTTGGCAAAATTTACG+TGG | + | chr5_4:5080968-5080987 | Msa0831960:intron | 25.0% |
| ! | TTGAATGGCTATCTATAAAA+TGG | - | chr5_4:5080999-5081018 | None:intergenic | 25.0% |
| !! | AGTGCCAAATAAATTTTGAA+TGG | - | chr5_4:5081014-5081033 | None:intergenic | 25.0% |
| ! | TCAAAATTTATTTGGCACTT+TGG | + | chr5_4:5081015-5081034 | Msa0831960:intron | 25.0% |
| !!! | TTTTTGGCTAGAATTGTTTT+TGG | - | chr5_4:5081218-5081237 | None:intergenic | 25.0% |
| ! | AAAGAAGGAGAATTGATAAA+GGG | - | chr5_4:5081393-5081412 | None:intergenic | 25.0% |
| ! | TAAAGAAGGAGAATTGATAA+AGG | - | chr5_4:5081394-5081413 | None:intergenic | 25.0% |
| ! | TAAAGGAGAATTGATAAAGA+AGG | - | chr5_4:5081408-5081427 | None:intergenic | 25.0% |
| ! | ACTAAAATAGACATAGCTAA+AGG | - | chr5_4:5081425-5081444 | None:intergenic | 25.0% |
| !! | TGAGAGAATTGATTTATGTT+TGG | - | chr5_4:5081484-5081503 | None:intergenic | 25.0% |
| !!! | AATTTTCATGCCTCTAAAAA+TGG | - | chr5_4:5081926-5081945 | None:intergenic | 25.0% |
| !!! | ACCATTTTATTGATTCATCT+AGG | + | chr5_4:5082104-5082123 | Msa0831960:intron | 25.0% |
| !!! | CCATTTTATTGATTCATCTA+GGG | + | chr5_4:5082105-5082124 | Msa0831960:intron | 25.0% |
| ! | TCTTTATCTTTATGTTTGGA+AGG | - | chr5_4:5082184-5082203 | None:intergenic | 25.0% |
| !! | GAAAGTGATTTTGTGTTTTA+TGG | + | chr5_4:5083018-5083037 | Msa0831960:intron | 25.0% |
| !!! | GGAAAAAGTTGATCTTTTTT+TGG | - | chr5_4:5083210-5083229 | None:intergenic | 25.0% |
| !!! | TGCACAAATTTTTATTTGGA+AGG | - | chr5_4:5083231-5083250 | None:intergenic | 25.0% |
| ! | ATCAAATGATGGTCTAATTT+GGG | - | chr5_4:5083336-5083355 | None:intergenic | 25.0% |
| ! | AATCAAATGATGGTCTAATT+TGG | - | chr5_4:5083337-5083356 | None:intergenic | 25.0% |
| ! | ACCATCATTTGATTATTGTA+GGG | + | chr5_4:5083343-5083362 | Msa0831960:intron | 25.0% |
| ! | AAAACAATGGAGAGAAAAAA+AGG | - | chr5_4:5083693-5083712 | None:intergenic | 25.0% |
| ! | ACTGTTTAAATATTTGTGCA+TGG | - | chr5_4:5083799-5083818 | None:intergenic | 25.0% |
| ! | TCCATATAAATTGTATCCAA+AGG | + | chr5_4:5084033-5084052 | Msa0831960:three_prime_UTR | 25.0% |
| ! | TCCTTTGGATACAATTTATA+TGG | - | chr5_4:5084037-5084056 | None:intergenic | 25.0% |
| ! | TAAATTGTATCCAAAGGAAA+AGG | + | chr5_4:5084039-5084058 | Msa0831960:three_prime_UTR | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | - | chr5_4:5084560-5084579 | None:intergenic | 25.0% |
| ! | TTATAGGGATTAAAAGTTGA+AGG | + | chr5_4:5084516-5084535 | Msa0831960:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr5_4:5084529-5084548 | Msa0831960:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr5_4:5084530-5084549 | Msa0831960:intron | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | + | chr5_4:5084560-5084579 | Msa0831960:intron | 25.0% |
| ACAAGTGATTGTAACTTGAA+TGG | - | chr5_4:5079302-5079321 | None:intergenic | 30.0% | |
| TTACAACCACTTCTACAATA+GGG | + | chr5_4:5079347-5079366 | Msa0831960:five_prime_UTR | 30.0% | |
| TTATGTCACGTGTAAATTTG+CGG | + | chr5_4:5079402-5079421 | Msa0831960:five_prime_UTR | 30.0% | |
| ! | CTAGGAATTTTGTAGAATCT+GGG | - | chr5_4:5079439-5079458 | None:intergenic | 30.0% |
| TTAAGCACTAATTTACATGG+CGG | - | chr5_4:5079464-5079483 | None:intergenic | 30.0% | |
| GACCACCAAGTATAAATAAA+AGG | + | chr5_4:5079538-5079557 | Msa0831960:five_prime_UTR | 30.0% | |
| !! | CACCTTTTATTTATACTTGG+TGG | - | chr5_4:5079543-5079562 | None:intergenic | 30.0% |
| !! | CAGCACCTTTTATTTATACT+TGG | - | chr5_4:5079546-5079565 | None:intergenic | 30.0% |
| ACAACATAACATACGATAAG+AGG | + | chr5_4:5079588-5079607 | Msa0831960:five_prime_UTR | 30.0% | |
| !!! | TGTGTTTGTGTTTTTTGTGT+TGG | - | chr5_4:5079648-5079667 | None:intergenic | 30.0% |
| TATATGTAGTGGCTAATTGA+GGG | - | chr5_4:5079802-5079821 | None:intergenic | 30.0% | |
| AAAATCTTCAATTCCTACCT+TGG | - | chr5_4:5080047-5080066 | None:intergenic | 30.0% | |
| ! | AGGTAGGAATTGAAGATTTT+TGG | + | chr5_4:5080047-5080066 | Msa0831960:intron | 30.0% |
| !!! | GAATTTTTTTTAAGGGTGCA+TGG | - | chr5_4:5080249-5080268 | None:intergenic | 30.0% |
| GAATTCACAAACATAAGAGT+AGG | - | chr5_4:5080362-5080381 | None:intergenic | 30.0% | |
| ACAGCATTAAGAGACTATAT+TGG | + | chr5_4:5080434-5080453 | Msa0831960:CDS | 30.0% | |
| ATTACAAAAGCAAGAATGGT+GGG | + | chr5_4:5080498-5080517 | Msa0831960:CDS | 30.0% | |
| ACAGACAATCATCTAATGTA+CGG | + | chr5_4:5080735-5080754 | Msa0831960:CDS | 30.0% | |
| GCCAAATAAAACAATGATTG+AGG | - | chr5_4:5080958-5080977 | None:intergenic | 30.0% | |
| ATGGCTATCTATAAAATGGT+AGG | - | chr5_4:5080995-5081014 | None:intergenic | 30.0% | |
| GGGCAATAAAGGAAAATAAT+AGG | - | chr5_4:5081373-5081392 | None:intergenic | 30.0% | |
| GAATTGATAAAGGGCAATAA+AGG | - | chr5_4:5081384-5081403 | None:intergenic | 30.0% | |
| ATAACTATGGGGTAATACTT+TGG | - | chr5_4:5081583-5081602 | None:intergenic | 30.0% | |
| ! | ATTTGGTTGATTAGTTAAGC+AGG | - | chr5_4:5081628-5081647 | None:intergenic | 30.0% |
| !! | ATGCTTTGAGAATATCTTAG+TGG | + | chr5_4:5081855-5081874 | Msa0831960:intron | 30.0% |
| !! | ACTCGCTTTAATTGATTTTG+TGG | + | chr5_4:5081992-5082011 | Msa0831960:intron | 30.0% |
| CCCTAGATGAATCAATAAAA+TGG | - | chr5_4:5082108-5082127 | None:intergenic | 30.0% | |
| GAAACAAGCATGGAAAAAAT+GGG | + | chr5_4:5082455-5082474 | Msa0831960:CDS | 30.0% | |
| AAACAAGCATGGAAAAAATG+GGG | + | chr5_4:5082456-5082475 | Msa0831960:CDS | 30.0% | |
| ATCTCCTATTTATTGCAAGA+TGG | + | chr5_4:5082663-5082682 | Msa0831960:CDS | 30.0% | |
| ATCACCATCTTGCAATAAAT+AGG | - | chr5_4:5082670-5082689 | None:intergenic | 30.0% | |
| TATTTATTGCAAGATGGTGA+TGG | + | chr5_4:5082669-5082688 | Msa0831960:CDS | 30.0% | |
| CCACAAAACAATAATACTAC+TGG | - | chr5_4:5082822-5082841 | None:intergenic | 30.0% | |
| !! | CCAGTAGTATTATTGTTTTG+TGG | + | chr5_4:5082819-5082838 | Msa0831960:intron | 30.0% |
| GCATAAACATAAAATATGCC+CGG | + | chr5_4:5083164-5083183 | Msa0831960:intron | 30.0% | |
| CATAAACATAAAATATGCCC+GGG | + | chr5_4:5083165-5083184 | Msa0831960:intron | 30.0% | |
| ATAAACATAAAATATGCCCG+GGG | + | chr5_4:5083166-5083185 | Msa0831960:intron | 30.0% | |
| !!! | AGTTGATCTTTTTTTGGTAG+TGG | - | chr5_4:5083204-5083223 | None:intergenic | 30.0% |
| !!! | GGAAAAAGTTGGTCTTTTTT+TGG | - | chr5_4:5083285-5083304 | None:intergenic | 30.0% |
| GACCATCATTTGATTATTGT+AGG | + | chr5_4:5083342-5083361 | Msa0831960:intron | 30.0% | |
| TCCCTACAATAATCAAATGA+TGG | - | chr5_4:5083347-5083366 | None:intergenic | 30.0% | |
| GTCTAAAAGTTGTCAAAAAG+TGG | - | chr5_4:5083626-5083645 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr5_4:5083744-5083763 | Msa0831960:intron | 30.0% | |
| ATTGGCTATATTAGATAAGC+TGG | + | chr5_4:5083898-5083917 | Msa0831960:CDS | 30.0% | |
| TTTACCAAACGACAACATTA+AGG | + | chr5_4:5083928-5083947 | Msa0831960:CDS | 30.0% | |
| AAGGTTGTTGTAAATTGTAG+TGG | + | chr5_4:5083947-5083966 | Msa0831960:CDS | 30.0% | |
| ! | TAGTGTTTTTCCTTTTCCTT+TGG | - | chr5_4:5084052-5084071 | None:intergenic | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr5_4:5084172-5084191 | None:intergenic | 30.0% | |
| !! | GGTGGCTTATATTTTAGATA+GGG | - | chr5_4:5084604-5084623 | None:intergenic | 30.0% |
| !! | AGGTGGCTTATATTTTAGAT+AGG | - | chr5_4:5084605-5084624 | None:intergenic | 30.0% |
| CTTACAACCACTTCTACAAT+AGG | + | chr5_4:5079346-5079365 | Msa0831960:five_prime_UTR | 35.0% | |
| ATTATGCCCTATTGTAGAAG+TGG | - | chr5_4:5079356-5079375 | None:intergenic | 35.0% | |
| ! | GCTAGGAATTTTGTAGAATC+TGG | - | chr5_4:5079440-5079459 | None:intergenic | 35.0% |
| GGGTTAAGCACTAATTTACA+TGG | - | chr5_4:5079467-5079486 | None:intergenic | 35.0% | |
| TGTACCTTGCAATTTACATG+CGG | - | chr5_4:5079678-5079697 | None:intergenic | 35.0% | |
| GGTTACTCGTGATAAGTTTA+AGG | + | chr5_4:5079769-5079788 | Msa0831960:CDS | 35.0% | |
| GTATATGTAGTGGCTAATTG+AGG | - | chr5_4:5079803-5079822 | None:intergenic | 35.0% | |
| !! | TTTCTCAATCAAGGGTATTG+TGG | - | chr5_4:5079837-5079856 | None:intergenic | 35.0% |
| ! | TGGCTCTACAATAATTTCTG+TGG | - | chr5_4:5079861-5079880 | None:intergenic | 35.0% |
| ACCACTTCTACTGGAAAATT+TGG | + | chr5_4:5079887-5079906 | Msa0831960:CDS | 35.0% | |
| ! | ACCAAATTTTCCAGTAGAAG+TGG | - | chr5_4:5079891-5079910 | None:intergenic | 35.0% |
| CTTCTACTGGAAAATTTGGT+AGG | + | chr5_4:5079891-5079910 | Msa0831960:CDS | 35.0% | |
| ACTGGAAAATTTGGTAGGTT+TGG | + | chr5_4:5079896-5079915 | Msa0831960:CDS | 35.0% | |
| GAAAATTTGGTAGGTTTGGA+GGG | + | chr5_4:5079900-5079919 | Msa0831960:CDS | 35.0% | |
| AAGCACATTACAAGTGTTTC+TGG | - | chr5_4:5079935-5079954 | None:intergenic | 35.0% | |
| ! | TTTTAAACTCAGCTTCAAGC+TGG | - | chr5_4:5079961-5079980 | None:intergenic | 35.0% |
| TTACCTGAAAAACATCATCG+TGG | - | chr5_4:5079991-5080010 | None:intergenic | 35.0% | |
| GAGCATTACAAAAGCAAGAA+TGG | + | chr5_4:5080494-5080513 | Msa0831960:CDS | 35.0% | |
| CATTACAAAAGCAAGAATGG+TGG | + | chr5_4:5080497-5080516 | Msa0831960:CDS | 35.0% | |
| GTATGGGTGACATTAAATCT+GGG | - | chr5_4:5081098-5081117 | None:intergenic | 35.0% | |
| TGTATGGGTGACATTAAATC+TGG | - | chr5_4:5081099-5081118 | None:intergenic | 35.0% | |
| !! | CAAACCAAACACGTTGTTTT+TGG | - | chr5_4:5081234-5081253 | None:intergenic | 35.0% |
| CAAAAACAACGTGTTTGGTT+TGG | + | chr5_4:5081232-5081251 | Msa0831960:intron | 35.0% | |
| ! | TTCTAGAAAAGCTAGAAGCT+AGG | - | chr5_4:5081311-5081330 | None:intergenic | 35.0% |
| CAAACACACACTTAATGTCA+CGG | + | chr5_4:5081544-5081563 | Msa0831960:intron | 35.0% | |
| TTACGAGGATCATAACTATG+GGG | - | chr5_4:5081594-5081613 | None:intergenic | 35.0% | |
| GTTACGAGGATCATAACTAT+GGG | - | chr5_4:5081595-5081614 | None:intergenic | 35.0% | |
| TTGAGAATATCTTAGTGGCA+CGG | + | chr5_4:5081860-5081879 | Msa0831960:intron | 35.0% | |
| ATATGATCGATCATGCTTTG+TGG | + | chr5_4:5082139-5082158 | Msa0831960:intron | 35.0% | |
| ! | ATGTAGGTTGAAGCTGTAAA+TGG | + | chr5_4:5082285-5082304 | Msa0831960:intron | 35.0% |
| TTTCAAAGATGCATCATCAG+AGG | + | chr5_4:5082311-5082330 | Msa0831960:CDS | 35.0% | |
| AAGAAACAAGGAAACAAGCA+TGG | + | chr5_4:5082445-5082464 | Msa0831960:CDS | 35.0% | |
| GGAAACAAGCATGGAAAAAA+TGG | + | chr5_4:5082454-5082473 | Msa0831960:CDS | 35.0% | |
| ACACTTGCAACAATAATGTC+TGG | - | chr5_4:5082489-5082508 | None:intergenic | 35.0% | |
| GACATTATTGTTGCAAGTGT+TGG | + | chr5_4:5082489-5082508 | Msa0831960:CDS | 35.0% | |
| TGGAAAACATTCTTCCACTT+TGG | + | chr5_4:5082608-5082627 | Msa0831960:CDS | 35.0% | |
| ATAAACACCCATTTCTCCTT+TGG | - | chr5_4:5082634-5082653 | None:intergenic | 35.0% | |
| !!! | AGTTGGTCTTTTTTTGGTAG+TGG | - | chr5_4:5083279-5083298 | None:intergenic | 35.0% |
| TTGAGTTTCCACAAAGAAAG+TGG | + | chr5_4:5083463-5083482 | Msa0831960:CDS | 35.0% | |
| TGAGTTTCCACAAAGAAAGT+GGG | + | chr5_4:5083464-5083483 | Msa0831960:CDS | 35.0% | |
| AGAGAAAAAAAGGAAGAGAG+AGG | - | chr5_4:5083683-5083702 | None:intergenic | 35.0% | |
| GTACGAGAGATTATGCAAAT+TGG | + | chr5_4:5083841-5083860 | Msa0831960:CDS | 35.0% | |
| GAGAGATTATGCAAATTGGA+GGG | + | chr5_4:5083845-5083864 | Msa0831960:CDS | 35.0% | |
| ! | ATGTTGTCGTTTGGTAAAGT+AGG | - | chr5_4:5083926-5083945 | None:intergenic | 35.0% |
| ACAACCTTAATGTTGTCGTT+TGG | - | chr5_4:5083935-5083954 | None:intergenic | 35.0% | |
| ATTCAAACAAGTACAGTAGG+TGG | - | chr5_4:5084622-5084641 | None:intergenic | 35.0% | |
| CCTATTCAAACAAGTACAGT+AGG | - | chr5_4:5084625-5084644 | None:intergenic | 35.0% | |
| CCTACTGTACTTGTTTGAAT+AGG | + | chr5_4:5084622-5084641 | Msa0831960:three_prime_UTR | 35.0% | |
| ATTCCAAAGTACAAACTCAG+GGG | - | chr5_4:5084650-5084669 | None:intergenic | 35.0% | |
| GATTCCAAAGTACAAACTCA+GGG | - | chr5_4:5084651-5084670 | None:intergenic | 35.0% | |
| TGATTCCAAAGTACAAACTC+AGG | - | chr5_4:5084652-5084671 | None:intergenic | 35.0% | |
| !! | TCAATCAAGGGTATTGTGGA+AGG | - | chr5_4:5079833-5079852 | None:intergenic | 40.0% |
| TCTGTGGCTTTCTCAATCAA+GGG | - | chr5_4:5079845-5079864 | None:intergenic | 40.0% | |
| TTCTGTGGCTTTCTCAATCA+AGG | - | chr5_4:5079846-5079865 | None:intergenic | 40.0% | |
| GGAAAATTTGGTAGGTTTGG+AGG | + | chr5_4:5079899-5079918 | Msa0831960:CDS | 40.0% | |
| CTGAAAAACATCATCGTGGA+GGG | - | chr5_4:5079987-5080006 | None:intergenic | 40.0% | |
| TTCAATTCCTACCTTGGACA+CGG | - | chr5_4:5080041-5080060 | None:intergenic | 40.0% | |
| AACCTTTGAGCATGATACAG+TGG | - | chr5_4:5080470-5080489 | None:intergenic | 40.0% | |
| ! | AAAAGCAAGAATGGTGGGAA+AGG | + | chr5_4:5080503-5080522 | Msa0831960:CDS | 40.0% |
| ! | AAAGCAAGAATGGTGGGAAA+GGG | + | chr5_4:5080504-5080523 | Msa0831960:CDS | 40.0% |
| AGAGAGGATCTAAACCATAC+TGG | + | chr5_4:5080545-5080564 | Msa0831960:CDS | 40.0% | |
| !! | CGGTCGAAAAAGTGTCATTA+CGG | + | chr5_4:5080619-5080638 | Msa0831960:CDS | 40.0% |
| !! | AAAACTTGCTTTGGAGTGCA+CGG | + | chr5_4:5080688-5080707 | Msa0831960:CDS | 40.0% |
| TGATTGTCTGTCCATGTCTT+TGG | - | chr5_4:5080726-5080745 | None:intergenic | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | chr5_4:5081046-5081065 | Msa0831960:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | chr5_4:5081047-5081066 | Msa0831960:intron | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | - | chr5_4:5081058-5081077 | None:intergenic | 40.0% | |
| !! | GTAGAGAATTGCTTTTGGCT+GGG | - | chr5_4:5081191-5081210 | None:intergenic | 40.0% |
| !! | TGTAGAGAATTGCTTTTGGC+TGG | - | chr5_4:5081192-5081211 | None:intergenic | 40.0% |
| ! | GCACTGTAGAGAATTGCTTT+TGG | - | chr5_4:5081196-5081215 | None:intergenic | 40.0% |
| CTAGCCAAAAACAACGTGTT+TGG | + | chr5_4:5081227-5081246 | Msa0831960:intron | 40.0% | |
| !! | TCATGGAGAATTGCTTTTGG+AGG | - | chr5_4:5081278-5081297 | None:intergenic | 40.0% |
| ! | GCTTCATGGAGAATTGCTTT+TGG | - | chr5_4:5081281-5081300 | None:intergenic | 40.0% |
| AGCTAGGATTTGTAGCTTCA+TGG | - | chr5_4:5081295-5081314 | None:intergenic | 40.0% | |
| CGTGACATTAAGTGTGTGTT+TGG | - | chr5_4:5081546-5081565 | None:intergenic | 40.0% | |
| GGTTACGAGGATCATAACTA+TGG | - | chr5_4:5081596-5081615 | None:intergenic | 40.0% | |
| AGTTATGATCCTCGTAACCA+AGG | + | chr5_4:5081597-5081616 | Msa0831960:intron | 40.0% | |
| TAGTTAAGCAGGACTTTCCT+TGG | - | chr5_4:5081617-5081636 | None:intergenic | 40.0% | |
| AATGTTAAACGGTGCCCTTT+GGG | + | chr5_4:5081656-5081675 | Msa0831960:intron | 40.0% | |
| TTGCTTAACCAATGCCCAAA+GGG | - | chr5_4:5081673-5081692 | None:intergenic | 40.0% | |
| TTTGCTTAACCAATGCCCAA+AGG | - | chr5_4:5081674-5081693 | None:intergenic | 40.0% | |
| !! | ACCAAATGGGTCTTGTTAAC+CGG | - | chr5_4:5081823-5081842 | None:intergenic | 40.0% |
| AAGACCCATTTGGTCCTAAA+GGG | + | chr5_4:5081829-5081848 | Msa0831960:intron | 40.0% | |
| TGAGAATATCTTAGTGGCAC+GGG | + | chr5_4:5081861-5081880 | Msa0831960:intron | 40.0% | |
| !! | TATCCGTGCACCATTTTTAG+AGG | + | chr5_4:5081913-5081932 | Msa0831960:intron | 40.0% |
| ! | ATGCCTCTAAAAATGGTGCA+CGG | - | chr5_4:5081919-5081938 | None:intergenic | 40.0% |
| ATCGATCATGCTTTGTGGTT+TGG | + | chr5_4:5082144-5082163 | Msa0831960:intron | 40.0% | |
| !! | ATCATGCTTTGTGGTTTGGT+GGG | + | chr5_4:5082148-5082167 | Msa0831960:intron | 40.0% |
| TGAAATTCACGTACCATGGT+AGG | - | chr5_4:5082411-5082430 | None:intergenic | 40.0% | |
| CATGGTACGTGAATTTCAGT+CGG | + | chr5_4:5082413-5082432 | Msa0831960:CDS | 40.0% | |
| GTGAATTTCAGTCGGTGATT+GGG | + | chr5_4:5082421-5082440 | Msa0831960:CDS | 40.0% | |
| !! | ATTGTTGCAAGTGTTGGAAC+AGG | + | chr5_4:5082495-5082514 | Msa0831960:CDS | 40.0% |
| GGAACAGGTTCAAATGCTTT+AGG | + | chr5_4:5082510-5082529 | Msa0831960:CDS | 40.0% | |
| CTGTGTCTGATAGAAACTCA+TGG | - | chr5_4:5082542-5082561 | None:intergenic | 40.0% | |
| GACACAGATGTGAGATTGAT+TGG | + | chr5_4:5082555-5082574 | Msa0831960:CDS | 40.0% | |
| ACTTTGGCCAAAGGAGAAAT+GGG | + | chr5_4:5082624-5082643 | Msa0831960:CDS | 40.0% | |
| GGAGAAATGGGTGTTTATCA+TGG | + | chr5_4:5082636-5082655 | Msa0831960:CDS | 40.0% | |
| TCACGAGGACAATCAAAAGT+TGG | - | chr5_4:5083119-5083138 | None:intergenic | 40.0% | |
| !!! | ATCTTTTTTTGGTAGTGGCC+GGG | - | chr5_4:5083199-5083218 | None:intergenic | 40.0% |
| !!! | GATCTTTTTTTGGTAGTGGC+CGG | - | chr5_4:5083200-5083219 | None:intergenic | 40.0% |
| !!! | GTCTTTTTTTGGTAGTGGCA+GGG | - | chr5_4:5083274-5083293 | None:intergenic | 40.0% |
| TCTTTGTGGAAACTCAACTC+TGG | - | chr5_4:5083460-5083479 | None:intergenic | 40.0% | |
| ACCATCAAGAGCTTCTTCAT+CGG | - | chr5_4:5083512-5083531 | None:intergenic | 40.0% | |
| CGAGAGATTATGCAAATTGG+AGG | + | chr5_4:5083844-5083863 | Msa0831960:CDS | 40.0% | |
| GGGTATATTTCCATCTCTAG+AGG | + | chr5_4:5083865-5083884 | Msa0831960:CDS | 40.0% | |
| !! | GTTGTAAATTGTAGTGGACG+TGG | + | chr5_4:5083953-5083972 | Msa0831960:CDS | 40.0% |
| TTCCAAAGTACAAACTCAGG+GGG | - | chr5_4:5084649-5084668 | None:intergenic | 40.0% | |
| ! | CTAATTTACATGGCGGAGCT+AGG | - | chr5_4:5079457-5079476 | None:intergenic | 45.0% |
| TGCTTAACCCACGTCAAAGA+TGG | + | chr5_4:5079477-5079496 | Msa0831960:five_prime_UTR | 45.0% | |
| GCTTAACCCACGTCAAAGAT+GGG | + | chr5_4:5079478-5079497 | Msa0831960:five_prime_UTR | 45.0% | |
| CTTAACCCACGTCAAAGATG+GGG | + | chr5_4:5079479-5079498 | Msa0831960:five_prime_UTR | 45.0% | |
| TTGTACCCCATCTTTGACGT+GGG | - | chr5_4:5079487-5079506 | None:intergenic | 45.0% | |
| ATGGCCGCATGTAAATTGCA+AGG | + | chr5_4:5079671-5079690 | Msa0831960:CDS | 45.0% | |
| ! | AGGCAAGGGTGTATATGTAG+TGG | - | chr5_4:5079813-5079832 | None:intergenic | 45.0% |
| !! | AAGGGTATTGTGGAAGGCAA+GGG | - | chr5_4:5079827-5079846 | None:intergenic | 45.0% |
| CCAGTAGAAGTGGTATCTTC+TGG | - | chr5_4:5079881-5079900 | None:intergenic | 45.0% | |
| CCAGAAGATACCACTTCTAC+TGG | + | chr5_4:5079878-5079897 | Msa0831960:CDS | 45.0% | |
| CCTGAAAAACATCATCGTGG+AGG | - | chr5_4:5079988-5080007 | None:intergenic | 45.0% | |
| ! | CCTCCACGATGATGTTTTTC+AGG | + | chr5_4:5079985-5080004 | Msa0831960:CDS | 45.0% |
| CACCACTGTATCATGCTCAA+AGG | + | chr5_4:5080465-5080484 | Msa0831960:CDS | 45.0% | |
| TCATCTTGTGAGAGCCAGTA+TGG | - | chr5_4:5080562-5080581 | None:intergenic | 45.0% | |
| !! | AAAAGTGTCATTACGGCCAC+CGG | + | chr5_4:5080626-5080645 | Msa0831960:CDS | 45.0% |
| ! | TGCATGCGCAAAACTTGCTT+TGG | + | chr5_4:5080679-5080698 | Msa0831960:CDS | 45.0% |
| ! | TTTGGAGTGCACGGTCTTTA+TGG | + | chr5_4:5080697-5080716 | Msa0831960:CDS | 45.0% |
| CTTTATGGCTGCCAAAGACA+TGG | + | chr5_4:5080712-5080731 | Msa0831960:CDS | 45.0% | |
| !! | GTACGGTTGATGAAGCTCTT+AGG | + | chr5_4:5080752-5080771 | Msa0831960:CDS | 45.0% |
| GATGAAGCTCTTAGGAGCTA+AGG | + | chr5_4:5080760-5080779 | Msa0831960:CDS | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | - | chr5_4:5081091-5081110 | None:intergenic | 45.0% | |
| ! | ACACAAAGGTGTGTGTTGTG+TGG | - | chr5_4:5081073-5081092 | None:intergenic | 45.0% |
| ACACAACACACACCTTTGTG+TGG | + | chr5_4:5081072-5081091 | Msa0831960:intron | 45.0% | |
| TGTCACCCATACAACACATC+TGG | + | chr5_4:5081106-5081125 | Msa0831960:intron | 45.0% | |
| GTCACCCATACAACACATCT+GGG | + | chr5_4:5081107-5081126 | Msa0831960:intron | 45.0% | |
| ACACAAAGGGTTGTGTTGTG+TGG | - | chr5_4:5081133-5081152 | None:intergenic | 45.0% | |
| ACACAACACAACCCTTTGTG+TGG | + | chr5_4:5081132-5081151 | Msa0831960:intron | 45.0% | |
| CTAAATCTGGGCCACACAAA+GGG | - | chr5_4:5081146-5081165 | None:intergenic | 45.0% | |
| CTTTGTGTGGCCCAGATTTA+GGG | + | chr5_4:5081085-5081104 | Msa0831960:intron | 45.0% | |
| ACCAAACAGGCCCTAAATCT+GGG | - | chr5_4:5081158-5081177 | None:intergenic | 45.0% | |
| AACCAAACAGGCCCTAAATC+TGG | - | chr5_4:5081159-5081178 | None:intergenic | 45.0% | |
| GAATGTTAAACGGTGCCCTT+TGG | + | chr5_4:5081655-5081674 | Msa0831960:intron | 45.0% | |
| CAAGACCCATTTGGTCCTAA+AGG | + | chr5_4:5081828-5081847 | Msa0831960:intron | 45.0% | |
| AGACCCATTTGGTCCTAAAG+GGG | + | chr5_4:5081830-5081849 | Msa0831960:intron | 45.0% | |
| ATTCCTTCCATCCATGCTCT+GGG | - | chr5_4:5081890-5081909 | None:intergenic | 45.0% | |
| ! | GATCATGCTTTGTGGTTTGG+TGG | + | chr5_4:5082147-5082166 | Msa0831960:intron | 45.0% |
| !! | TCATGCTTTGTGGTTTGGTG+GGG | + | chr5_4:5082149-5082168 | Msa0831960:intron | 45.0% |
| ! | ATCAGAGGCTTTTCGCTGTT+GGG | + | chr5_4:5082326-5082345 | Msa0831960:CDS | 45.0% |
| GAAAACAGCTACCACTTGTC+AGG | + | chr5_4:5082360-5082379 | Msa0831960:CDS | 45.0% | |
| CGACTGAAATTCACGTACCA+TGG | - | chr5_4:5082415-5082434 | None:intergenic | 45.0% | |
| CGTGAATTTCAGTCGGTGAT+TGG | + | chr5_4:5082420-5082439 | Msa0831960:CDS | 45.0% | |
| CGGTGATTGGGAAAGAAACA+AGG | + | chr5_4:5082433-5082452 | Msa0831960:CDS | 45.0% | |
| CAAGCATGGAAAAAATGGGG+AGG | + | chr5_4:5082459-5082478 | Msa0831960:CDS | 45.0% | |
| TTGATTGGAGTTGAAGCTGC+TGG | + | chr5_4:5082570-5082589 | Msa0831960:CDS | 45.0% | |
| !! | GAGTTGAAGCTGCTGGTTTA+GGG | + | chr5_4:5082577-5082596 | Msa0831960:CDS | 45.0% |
| ! | GCTGGTTTAGGGTTAGATAG+TGG | + | chr5_4:5082588-5082607 | Msa0831960:CDS | 45.0% |
| CATTCTTCCACTTTGGCCAA+AGG | + | chr5_4:5082615-5082634 | Msa0831960:CDS | 45.0% | |
| CATTTCTCCTTTGGCCAAAG+TGG | - | chr5_4:5082625-5082644 | None:intergenic | 45.0% | |
| CACTTTGGCCAAAGGAGAAA+TGG | + | chr5_4:5082623-5082642 | Msa0831960:CDS | 45.0% | |
| !!! | TCTTTTTTTGGTAGTGGCCG+GGG | - | chr5_4:5083198-5083217 | None:intergenic | 45.0% |
| !!! | GGTCTTTTTTTGGTAGTGGC+AGG | - | chr5_4:5083275-5083294 | None:intergenic | 45.0% |
| ! | ATTTACAGGATGGAGTACCC+AGG | + | chr5_4:5083427-5083446 | Msa0831960:intron | 45.0% |
| ACCGATGAAGAAGCTCTTGA+TGG | + | chr5_4:5083508-5083527 | Msa0831960:CDS | 45.0% | |
| TCCAAAGTACAAACTCAGGG+GGG | - | chr5_4:5084648-5084667 | None:intergenic | 45.0% | |
| !!! | ATATGTTTTTAAATTTAAAT+TGG | - | chr5_4:5080282-5080301 | None:intergenic | 5.0% |
| !! | TCAAAAAAAAAAAAAATTAT+TGG | - | chr5_4:5080851-5080870 | None:intergenic | 5.0% |
| !!! | TAATTATATAATGATTATTT+TGG | - | chr5_4:5082245-5082264 | None:intergenic | 5.0% |
| !!! | TTAAAAAAATAATTTTTCAT+TGG | + | chr5_4:5082974-5082993 | Msa0831960:intron | 5.0% |
| !!! | TTTTTTTTTTAATTATTTAC+AGG | + | chr5_4:5083413-5083432 | Msa0831960:intron | 5.0% |
| !! | CAAAAATTAAATTAAAAATA+GGG | - | chr5_4:5084218-5084237 | None:intergenic | 5.0% |
| !! | ACAAAAATTAAATTAAAAAT+AGG | - | chr5_4:5084219-5084238 | None:intergenic | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTT+AGG | - | chr5_4:5084292-5084311 | None:intergenic | 5.0% |
| !!! | AAGAATTTTTATATTTTTTA+CGG | - | chr5_4:5084346-5084365 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAAATTTTTT+TGG | + | chr5_4:5084384-5084403 | Msa0831960:intron | 5.0% |
| !!! | AAAAAATTCTAAATTTTTTT+GGG | + | chr5_4:5084385-5084404 | Msa0831960:intron | 5.0% |
| GTTGTACCCCATCTTTGACG+TGG | - | chr5_4:5079488-5079507 | None:intergenic | 50.0% | |
| ! | TGGAGGCGTGTTAGACTGTT+TGG | - | chr5_4:5079510-5079529 | None:intergenic | 50.0% |
| ACCGCAGAGTTACGCTCTTT+GGG | - | chr5_4:5079737-5079756 | None:intergenic | 50.0% | |
| !! | CAAGGGTATTGTGGAAGGCA+AGG | - | chr5_4:5079828-5079847 | None:intergenic | 50.0% |
| GAAGGACAATACCGTGTCCA+AGG | + | chr5_4:5080027-5080046 | Msa0831960:intron | 50.0% | |
| GACAATACCGTGTCCAAGGT+AGG | + | chr5_4:5080031-5080050 | Msa0831960:intron | 50.0% | |
| GCTATGATTGCCAAGCGCAT+CGG | + | chr5_4:5080599-5080618 | Msa0831960:CDS | 50.0% | |
| !!! | ACTTTTTCGACCGATGCGCT+TGG | - | chr5_4:5080612-5080631 | None:intergenic | 50.0% |
| AAGCCCATGATGTCCTGAAC+CGG | - | chr5_4:5080648-5080667 | None:intergenic | 50.0% | |
| GTGGCCCAGATGTGTTGTAT+GGG | - | chr5_4:5081114-5081133 | None:intergenic | 50.0% | |
| TGTGGCCCAGATGTGTTGTA+TGG | - | chr5_4:5081115-5081134 | None:intergenic | 50.0% | |
| CCTAAATCTGGGCCACACAA+AGG | - | chr5_4:5081147-5081166 | None:intergenic | 50.0% | |
| CCTTTGTGTGGCCCAGATTT+AGG | + | chr5_4:5081084-5081103 | Msa0831960:intron | 50.0% | |
| GGGCAAAAGCTGAACCAAAC+AGG | - | chr5_4:5081171-5081190 | None:intergenic | 50.0% | |
| CAGGACTTTCCTTGGTTACG+AGG | - | chr5_4:5081609-5081628 | None:intergenic | 50.0% | |
| GCCGGTTAACAAGACCCATT+TGG | + | chr5_4:5081819-5081838 | Msa0831960:intron | 50.0% | |
| !! | TCGCCCCTTTAGGACCAAAT+GGG | - | chr5_4:5081836-5081855 | None:intergenic | 50.0% |
| !! | ATCGCCCCTTTAGGACCAAA+TGG | - | chr5_4:5081837-5081856 | None:intergenic | 50.0% |
| !! | TCTCAAAGCATCGCCCCTTT+AGG | - | chr5_4:5081846-5081865 | None:intergenic | 50.0% |
| CATTCCTTCCATCCATGCTC+TGG | - | chr5_4:5081891-5081910 | None:intergenic | 50.0% | |
| CAGAGCATGGATGGAAGGAA+TGG | + | chr5_4:5081889-5081908 | Msa0831960:intron | 50.0% | |
| !! | CATGCTTTGTGGTTTGGTGG+GGG | + | chr5_4:5082150-5082169 | Msa0831960:intron | 50.0% |
| ! | CATCAGAGGCTTTTCGCTGT+TGG | + | chr5_4:5082325-5082344 | Msa0831960:CDS | 50.0% |
| CTACCACTTGTCAGGTTCAG+CGG | + | chr5_4:5082368-5082387 | Msa0831960:CDS | 50.0% | |
| ACCACATCCATGTCCTACCA+TGG | + | chr5_4:5082395-5082414 | Msa0831960:CDS | 50.0% | |
| ACCATGGTAGGACATGGATG+TGG | - | chr5_4:5082399-5082418 | None:intergenic | 50.0% | |
| TCACGTACCATGGTAGGACA+TGG | - | chr5_4:5082405-5082424 | None:intergenic | 50.0% | |
| !! | GGAGTTGAAGCTGCTGGTTT+AGG | + | chr5_4:5082576-5082595 | Msa0831960:CDS | 50.0% |
| AACCTCACTCCATTGCAGCT+GGG | + | chr5_4:5082703-5082722 | Msa0831960:CDS | 50.0% | |
| TGTGACTTACCCAGCTGCAA+TGG | - | chr5_4:5082715-5082734 | None:intergenic | 50.0% | |
| TGAGCGTAGCTCAGTTGGTT+GGG | + | chr5_4:5083136-5083155 | Msa0831960:intron | 50.0% | |
| TCAACTCTGGACCAACTCCT+GGG | - | chr5_4:5083447-5083466 | None:intergenic | 50.0% | |
| TCTAGAGGCAGCACATGCAT+TGG | + | chr5_4:5083880-5083899 | Msa0831960:CDS | 50.0% | |
| TGGACGTGGAGACAAAGATG+CGG | + | chr5_4:5083967-5083986 | Msa0831960:CDS | 50.0% | |
| ! | TACTTGGTGGTCGACGCAAC+TGG | - | chr5_4:5079530-5079549 | None:intergenic | 55.0% |
| ! | GCCCAAAGAGCGTAACTCTG+CGG | + | chr5_4:5079733-5079752 | Msa0831960:CDS | 55.0% |
| CACCGCAGAGTTACGCTCTT+TGG | - | chr5_4:5079738-5079757 | None:intergenic | 55.0% | |
| ! | CAAAGAGCGTAACTCTGCGG+TGG | + | chr5_4:5079736-5079755 | Msa0831960:CDS | 55.0% |
| !! | CTGTTGCTAGCTCTGCCTGT+GGG | - | chr5_4:5080418-5080437 | None:intergenic | 55.0% |
| !! | CCACCGGTTCAGGACATCAT+GGG | + | chr5_4:5080642-5080661 | Msa0831960:CDS | 55.0% |
| ! | GCCCAGATTTAGGGCCTGTT+TGG | + | chr5_4:5081154-5081173 | Msa0831960:intron | 55.0% |
| AAACGGTGCCCTTTGGGCAT+TGG | + | chr5_4:5081662-5081681 | Msa0831960:intron | 55.0% | |
| TTGTTAACCGGCGCCTCTTG+GGG | - | chr5_4:5081811-5081830 | None:intergenic | 55.0% | |
| CTTGTTAACCGGCGCCTCTT+GGG | - | chr5_4:5081812-5081831 | None:intergenic | 55.0% | |
| TCTTGTTAACCGGCGCCTCT+TGG | - | chr5_4:5081813-5081832 | None:intergenic | 55.0% | |
| TAGCCCAGAGCATGGATGGA+AGG | + | chr5_4:5081884-5081903 | Msa0831960:intron | 55.0% | |
| ! | GAGGCTTTTCGCTGTTGGGT+TGG | + | chr5_4:5082330-5082349 | Msa0831960:CDS | 55.0% |
| !! | TCGCTGTTGGGTTGGAGACT+TGG | + | chr5_4:5082338-5082357 | Msa0831960:CDS | 55.0% |
| CACTTGTCAGGTTCAGCGGT+GGG | + | chr5_4:5082372-5082391 | Msa0831960:CDS | 55.0% | |
| GAACCTCACTCCATTGCAGC+TGG | + | chr5_4:5082702-5082721 | Msa0831960:CDS | 55.0% | |
| TACCCAGCTGCAATGGAGTG+AGG | - | chr5_4:5082708-5082727 | None:intergenic | 55.0% | |
| GTGAGCGTAGCTCAGTTGGT+TGG | + | chr5_4:5083135-5083154 | Msa0831960:intron | 55.0% | |
| ! | AGGATGGAGTACCCAGGAGT+TGG | + | chr5_4:5083433-5083452 | Msa0831960:intron | 55.0% |
| CTCAACTCTGGACCAACTCC+TGG | - | chr5_4:5083448-5083467 | None:intergenic | 55.0% | |
| CTGCACGCCCACTTTCTTTG+TGG | - | chr5_4:5083474-5083493 | None:intergenic | 55.0% | |
| ! | GCATGTGCTGCCTCTAGAGA+TGG | - | chr5_4:5083878-5083897 | None:intergenic | 55.0% |
| GCCCCCCTGAGTTTGTACTT+TGG | + | chr5_4:5084644-5084663 | Msa0831960:three_prime_UTR | 55.0% | |
| ! | TTGGTGGTCGACGCAACTGG+AGG | - | chr5_4:5079527-5079546 | None:intergenic | 60.0% |
| CTCTGCGGTGGTTCAAGCAG+TGG | + | chr5_4:5079748-5079767 | Msa0831960:CDS | 60.0% | |
| !! | GCTGTTGCTAGCTCTGCCTG+TGG | - | chr5_4:5080419-5080438 | None:intergenic | 60.0% |
| !! | GTCATTACGGCCACCGGTTC+AGG | + | chr5_4:5080632-5080651 | Msa0831960:CDS | 60.0% |
| !! | GCCACCGGTTCAGGACATCA+TGG | + | chr5_4:5080641-5080660 | Msa0831960:CDS | 60.0% |
| CCCATGATGTCCTGAACCGG+TGG | - | chr5_4:5080645-5080664 | None:intergenic | 60.0% | |
| TGTTAACCGGCGCCTCTTGG+GGG | - | chr5_4:5081810-5081829 | None:intergenic | 60.0% | |
| CCACCGCTGAACCTGACAAG+TGG | - | chr5_4:5082374-5082393 | None:intergenic | 60.0% | |
| CCACTTGTCAGGTTCAGCGG+TGG | + | chr5_4:5082371-5082390 | Msa0831960:CDS | 60.0% | |
| CCAACTGAGCTACGCTCACG+AGG | - | chr5_4:5083134-5083153 | None:intergenic | 60.0% | |
| CCTCGTGAGCGTAGCTCAGT+TGG | + | chr5_4:5083131-5083150 | Msa0831960:intron | 60.0% | |
| TATGCCCGGGGTTCAAACCC+CGG | + | chr5_4:5083178-5083197 | Msa0831960:intron | 60.0% | |
| CGGGTAGCCCAGAGCATGGA+TGG | + | chr5_4:5081880-5081899 | Msa0831960:intron | 65.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr5_4:5083186-5083205 | None:intergenic | 65.0% | |
| CTAGTGCCCCAGCCCCCAAG+AGG | + | chr5_4:5081795-5081814 | Msa0831960:intron | 70.0% | |
| GGCACGGGTAGCCCAGAGCA+TGG | + | chr5_4:5081876-5081895 | Msa0831960:intron | 70.0% | |
| GTGGCCGGGGTTTGAACCCC+GGG | - | chr5_4:5083185-5083204 | None:intergenic | 70.0% | |
| ACCGGCGCCTCTTGGGGGCT+GGG | - | chr5_4:5081805-5081824 | None:intergenic | 75.0% | |
| AACCGGCGCCTCTTGGGGGC+TGG | - | chr5_4:5081806-5081825 | None:intergenic | 75.0% | |
| ! | CCGGCGCCTCTTGGGGGCTG+GGG | - | chr5_4:5081804-5081823 | None:intergenic | 80.0% |
| !! | CCCCAGCCCCCAAGAGGCGC+CGG | + | chr5_4:5081801-5081820 | Msa0831960:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 5079280 | 5084744 | 5079280 | ID=Msa0831960;Name=Msa0831960 |
| chr5_4 | mRNA | 5079280 | 5084744 | 5079280 | ID=Msa0831960-mRNA-1;Parent=Msa0831960;Name=Msa0831960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=391|1|1|1|0.8|0.66|6|220|466 |
| chr5_4 | exon | 5079280 | 5080006 | 5079280 | ID=Msa0831960-mRNA-1:exon:2109;Parent=Msa0831960-mRNA-1 |
| chr5_4 | exon | 5080422 | 5080781 | 5080422 | ID=Msa0831960-mRNA-1:exon:2110;Parent=Msa0831960-mRNA-1 |
| chr5_4 | exon | 5082291 | 5082724 | 5082291 | ID=Msa0831960-mRNA-1:exon:2111;Parent=Msa0831960-mRNA-1 |
| chr5_4 | exon | 5083435 | 5083529 | 5083435 | ID=Msa0831960-mRNA-1:exon:2112;Parent=Msa0831960-mRNA-1 |
| chr5_4 | exon | 5083840 | 5084097 | 5083840 | ID=Msa0831960-mRNA-1:exon:2113;Parent=Msa0831960-mRNA-1 |
| chr5_4 | exon | 5084607 | 5084744 | 5084607 | ID=Msa0831960-mRNA-1:exon:2114;Parent=Msa0831960-mRNA-1 |
| chr5_4 | five_prime_UTR | 5079280 | 5079670 | 5079280 | ID=Msa0831960-mRNA-1:five_prime_utr;Parent=Msa0831960-mRNA-1 |
| chr5_4 | CDS | 5079671 | 5080006 | 5079671 | ID=Msa0831960-mRNA-1:cds;Parent=Msa0831960-mRNA-1 |
| chr5_4 | CDS | 5080422 | 5080781 | 5080422 | ID=Msa0831960-mRNA-1:cds;Parent=Msa0831960-mRNA-1 |
| chr5_4 | CDS | 5082291 | 5082724 | 5082291 | ID=Msa0831960-mRNA-1:cds;Parent=Msa0831960-mRNA-1 |
| chr5_4 | CDS | 5083435 | 5083529 | 5083435 | ID=Msa0831960-mRNA-1:cds;Parent=Msa0831960-mRNA-1 |
| chr5_4 | CDS | 5083840 | 5084015 | 5083840 | ID=Msa0831960-mRNA-1:cds;Parent=Msa0831960-mRNA-1 |
| chr5_4 | three_prime_UTR | 5084016 | 5084097 | 5084016 | ID=Msa0831960-mRNA-1:three_prime_utr;Parent=Msa0831960-mRNA-1 |
| chr5_4 | three_prime_UTR | 5084607 | 5084744 | 5084607 | ID=Msa0831960-mRNA-1:three_prime_utr;Parent=Msa0831960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
