AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0832810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832810 MtrunA17_Chr2g0316611 72.990 311 80 1 11 317 13 323 4.80e-159 449
Msa0832810 MtrunA17_Chr2g0316611 75.836 269 65 0 30 298 105 373 2.05e-141 404
Msa0832810 MtrunA17_Chr2g0316611 68.421 152 48 0 168 319 36 187 3.49e-62 202
Msa0832810 MtrunA17_Chr2g0316631 71.918 292 78 1 11 298 13 304 4.02e-146 413
Msa0832810 MtrunA17_Chr2g0316631 68.778 221 69 0 99 319 36 256 8.70e-99 293
Msa0832810 MtrunA17_Chr6g0467061 67.961 309 98 1 11 319 1 308 2.23e-144 410
Msa0832810 MtrunA17_Chr6g0467061 69.355 248 76 0 30 277 88 335 8.48e-116 337
Msa0832810 MtrunA17_Chr6g0467061 61.881 202 54 1 29 207 133 334 7.66e-74 230
Msa0832810 MtrunA17_Chr8g0377671 44.318 264 147 0 18 281 8 271 4.88e-68 214
Msa0832810 MtrunA17_Chr8g0377671 40.183 219 131 0 99 317 20 238 9.35e-48 162
Msa0832810 MtrunA17_Chr8g0377671 41.379 174 79 1 168 318 20 193 2.21e-34 127
Msa0832810 MtrunA17_Chr8g0382971 42.403 283 157 1 1 283 2 278 1.55e-62 202
Msa0832810 MtrunA17_Chr8g0382971 38.258 264 138 2 73 313 1 262 1.04e-47 164
Msa0832810 MtrunA17_Chr8g0382971 42.286 175 78 1 165 316 22 196 2.50e-34 128
Msa0832810 MtrunA17_Chr5g0398011 71.324 136 39 0 10 145 15 150 1.54e-60 190
Msa0832810 MtrunA17_Chr5g0398011 71.429 119 34 0 96 214 32 150 2.98e-52 169
Msa0832810 MtrunA17_Chr5g0398011 69.748 119 36 0 165 283 32 150 9.63e-51 165
Msa0832810 MtrunA17_Chr5g0398011 67.470 83 27 0 237 319 35 117 1.20e-28 107
Msa0832810 MtrunA17_Chr8g0377221 46.847 222 106 3 99 318 5 216 4.33e-53 175
Msa0832810 MtrunA17_Chr8g0377221 46.445 211 98 2 29 224 4 214 1.73e-52 174
Msa0832810 MtrunA17_Chr8g0377221 54.248 153 69 1 168 319 5 157 2.09e-45 155
Msa0832810 MtrunA17_Chr8g0377221 40.000 150 75 2 26 160 70 219 5.01e-24 99.0
Msa0832810 MtrunA17_Chr8g0385241 36.391 327 172 3 24 315 4 329 7.22e-52 176
Msa0832810 MtrunA17_Chr8g0385241 33.113 302 122 4 96 317 7 308 3.06e-37 137
Msa0832810 MtrunA17_Chr8g0385241 33.704 270 143 5 26 283 98 343 8.73e-33 125
Msa0832810 MtrunA17_Chr8g0385241 32.773 238 136 1 1 214 106 343 2.10e-27 110
Msa0832810 MtrunA17_Chr4g0059911 41.772 237 137 1 32 267 11 247 1.28e-49 169
Msa0832810 MtrunA17_Chr4g0059911 42.273 220 126 1 99 317 9 228 4.26e-47 162
Msa0832810 MtrunA17_Chr4g0059911 42.763 152 63 2 168 318 9 137 3.54e-27 109
Msa0832810 MtrunA17_Chr4g0059911 58.537 82 33 1 236 316 8 89 1.88e-21 93.6
Msa0832810 MtrunA17_Chr4g0059911 37.255 102 64 0 28 129 146 247 1.48e-11 64.7
Msa0832810 MtrunA17_Chr5g0398021 64.286 126 45 0 88 213 2 127 2.05e-49 162
Msa0832810 MtrunA17_Chr5g0398021 60.317 126 50 0 157 282 2 127 1.89e-43 146
Msa0832810 MtrunA17_Chr5g0398021 64.078 103 37 0 31 133 14 116 1.12e-39 137
Msa0832810 MtrunA17_Chr5g0398021 58.947 95 39 0 225 319 1 95 9.25e-32 116
Msa0832810 MtrunA17_Chr8g0380791 47.000 200 105 1 18 217 1 199 3.45e-46 166
Msa0832810 MtrunA17_Chr8g0380791 47.340 188 98 1 99 286 13 199 1.04e-43 159
Msa0832810 MtrunA17_Chr8g0380791 44.571 175 74 1 168 319 13 187 1.03e-36 139
Msa0832810 MtrunA17_Chr8g0380791 43.564 101 34 1 213 313 12 89 8.65e-16 78.2
Msa0832810 MtrunA17_Chr8g0377191 37.450 251 111 2 19 269 1 205 2.37e-44 150
Msa0832810 MtrunA17_Chr8g0377191 39.896 193 116 0 100 292 13 205 2.78e-38 134
Msa0832810 MtrunA17_Chr8g0377191 40.462 173 80 1 169 318 13 185 7.43e-32 118
Msa0832810 MtrunA17_Chr1g0171491 40.201 199 118 1 93 291 55 252 1.51e-34 133
Msa0832810 MtrunA17_Chr1g0171491 40.107 187 111 1 29 215 60 245 7.83e-31 122
Msa0832810 MtrunA17_Chr1g0171491 37.870 169 105 0 151 319 44 212 1.51e-26 110
Msa0832810 MtrunA17_Chr1g0171491 32.086 187 127 0 127 313 43 229 4.22e-22 97.1
Msa0832810 MtrunA17_Chr1g0171491 32.258 124 84 0 196 319 43 166 4.82e-13 69.7
Msa0832810 MtrunA17_Chr8g0377211 39.487 195 71 3 18 212 8 155 7.45e-34 122
Msa0832810 MtrunA17_Chr8g0377211 45.255 137 51 2 168 281 20 155 3.35e-27 104
Msa0832810 MtrunA17_Chr3g0082501 40.000 195 116 1 93 287 58 251 1.31e-33 130
Msa0832810 MtrunA17_Chr3g0082501 38.021 192 118 1 27 218 61 251 1.32e-31 124
Msa0832810 MtrunA17_Chr3g0082501 38.217 157 97 0 162 318 58 214 3.96e-26 108
Msa0832810 MtrunA17_Chr8g0353121 40.323 186 110 1 100 285 54 238 1.23e-32 127
Msa0832810 MtrunA17_Chr8g0353121 38.889 198 119 2 20 216 42 238 3.56e-31 123
Msa0832810 MtrunA17_Chr8g0353121 37.333 150 94 0 169 318 54 203 1.55e-23 101
Msa0832810 MtrunA17_Chr8g0353121 31.579 171 117 0 143 313 51 221 1.35e-17 83.6
Msa0832810 MtrunA17_Chr8g0353121 31.383 188 118 2 29 215 98 275 1.55e-15 77.4
Msa0832810 MtrunA17_Chr8g0353121 33.594 128 85 0 192 319 54 181 1.40e-12 68.6
Msa0832810 MtrunA17_Chr3g0131001 40.230 174 104 0 27 200 52 225 9.17e-32 125
Msa0832810 MtrunA17_Chr3g0131001 36.364 198 118 1 100 289 56 253 1.10e-27 113
Msa0832810 MtrunA17_Chr3g0131001 38.411 151 93 0 169 319 56 206 9.10e-23 99.0
Msa0832810 MtrunA17_Chr3g0131001 34.132 167 110 0 144 310 54 220 1.43e-18 86.3
Msa0832810 MtrunA17_Chr3g0115111 35.391 243 125 5 72 313 34 245 1.10e-31 125
Msa0832810 MtrunA17_Chr3g0115111 36.058 208 109 2 23 229 50 234 2.96e-31 124
Msa0832810 MtrunA17_Chr3g0115111 38.889 180 105 2 141 319 34 209 2.05e-28 115
Msa0832810 MtrunA17_Chr1g0180261 36.364 209 130 2 96 302 48 255 2.55e-31 124
Msa0832810 MtrunA17_Chr1g0180261 33.054 239 154 4 23 257 44 280 6.85e-31 122
Msa0832810 MtrunA17_Chr1g0180261 35.955 178 91 1 165 319 48 225 1.42e-25 107
Msa0832810 MtrunA17_Chr8g0385201 36.126 191 120 2 17 206 17 206 2.65e-28 115
Msa0832810 MtrunA17_Chr8g0385201 36.667 210 125 4 85 289 18 224 8.16e-27 110
Msa0832810 MtrunA17_Chr8g0385201 37.419 155 96 1 166 319 28 182 6.42e-23 99.4
Msa0832810 MtrunA17_Chr8g0385201 35.185 162 104 1 144 304 29 190 8.67e-22 95.9
Msa0832810 MtrunA17_Chr7g0256301 38.462 195 97 1 99 293 71 242 3.17e-27 112
Msa0832810 MtrunA17_Chr7g0256301 38.012 171 83 1 168 315 71 241 4.00e-26 108
Msa0832810 MtrunA17_Chr7g0256301 37.879 198 100 2 27 224 68 242 1.24e-25 107
Msa0832810 MtrunA17_Chr8g0383551 31.698 265 106 6 92 281 17 281 9.86e-27 108
Msa0832810 MtrunA17_Chr8g0383551 28.626 262 138 7 11 223 8 269 5.40e-20 89.4
Msa0832810 MtrunA17_Chr8g0383551 27.350 234 95 6 161 319 17 250 4.95e-14 72.0
Msa0832810 MtrunA17_Chr8g0383551 32.258 155 74 3 26 149 138 292 7.75e-12 65.5
Msa0832810 MtrunA17_Chr8g0383331 35.326 184 91 2 29 212 3 158 2.10e-26 102
Msa0832810 MtrunA17_Chr8g0383331 39.189 148 90 0 120 267 2 149 1.14e-24 97.8
Msa0832810 MtrunA17_Chr8g0383331 32.468 154 104 0 73 226 1 154 3.60e-20 85.9
Msa0832810 MtrunA17_Chr8g0383331 33.987 153 101 0 165 317 1 153 1.24e-19 84.3
Msa0832810 MtrunA17_Chr8g0383331 35.294 119 77 0 26 144 46 164 1.43e-15 73.2
Msa0832810 MtrunA17_Chr5g0424301 36.313 179 91 1 100 278 70 225 2.49e-26 109
Msa0832810 MtrunA17_Chr5g0424301 34.426 183 97 1 27 209 66 225 1.03e-25 107
Msa0832810 MtrunA17_Chr5g0424301 35.326 184 110 2 138 319 44 220 2.28e-25 106
Msa0832810 MtrunA17_Chr5g0424301 33.133 166 111 0 143 308 67 232 8.25e-21 93.2
Msa0832810 MtrunA17_Chr5g0424301 30.000 140 98 0 31 170 93 232 4.12e-14 73.2
Msa0832810 MtrunA17_Chr7g0233351 33.508 191 104 1 100 290 193 360 1.03e-20 92.0
Msa0832810 MtrunA17_Chr7g0233351 37.989 179 109 2 26 203 188 365 1.10e-20 92.0
Msa0832810 MtrunA17_Chr7g0233351 36.000 150 96 0 169 318 193 342 2.59e-18 85.1
Msa0832810 MtrunA17_Chr7g0233351 26.941 219 114 2 54 272 193 365 8.18e-14 71.6
Msa0832810 MtrunA17_Chr4g0055371 33.929 168 111 0 120 287 170 337 1.73e-20 91.3
Msa0832810 MtrunA17_Chr4g0055371 36.313 179 112 2 26 203 168 345 7.58e-19 86.7
Msa0832810 MtrunA17_Chr4g0055371 32.620 187 124 1 132 318 138 322 8.16e-18 83.6
Msa0832810 MtrunA17_Chr4g0055371 33.333 168 112 0 51 218 170 337 1.69e-17 82.8
Msa0832810 MtrunA17_Chr4g0055371 37.008 127 78 2 24 149 212 337 3.55e-12 66.6
Msa0832810 MtrunA17_Chr5g0424111 34.715 193 103 1 99 291 197 366 3.41e-20 90.5
Msa0832810 MtrunA17_Chr5g0424111 35.196 179 116 0 25 203 192 370 2.47e-19 88.2
Msa0832810 MtrunA17_Chr5g0424111 34.524 168 110 0 151 318 180 347 5.23e-18 84.3
Msa0832810 MtrunA17_Chr8g0336161 34.615 182 119 0 22 203 189 370 5.92e-20 90.1
Msa0832810 MtrunA17_Chr8g0336161 33.908 174 115 0 99 272 197 370 7.72e-20 89.7
Msa0832810 MtrunA17_Chr8g0336161 32.203 177 120 0 143 319 195 371 7.48e-18 84.0
Msa0832810 MtrunA17_Chr8g0336161 30.682 176 122 0 74 249 195 370 6.27e-14 72.0
Msa0832810 MtrunA17_Chr3g0114791 32.338 201 112 2 99 298 185 362 4.56e-18 84.3
Msa0832810 MtrunA17_Chr3g0114791 35.032 157 102 0 162 318 179 335 2.68e-17 82.0
Msa0832810 MtrunA17_Chr3g0114791 35.233 193 119 3 26 217 181 368 3.59e-17 81.6
Msa0832810 MtrunA17_Chr3g0114791 29.947 187 131 0 63 249 172 358 2.49e-14 73.2
Msa0832810 MtrunA17_Chr8g0377201 55.556 72 31 1 144 215 3 73 9.97e-18 77.0
Msa0832810 MtrunA17_Chr8g0377201 52.703 74 34 1 73 146 1 73 1.14e-17 76.6
Msa0832810 MtrunA17_Chr8g0377201 54.167 72 32 1 213 284 3 73 8.31e-17 74.3
Msa0832810 MtrunA17_Chr8g0377201 59.615 52 20 1 26 77 23 73 1.53e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832810 AT1G60890.2 37.931 203 122 2 29 231 22 220 1.32e-34 134
Msa0832810 AT1G60890.2 38.830 188 114 1 99 286 23 209 7.37e-34 131
Msa0832810 AT1G60890.2 38.816 152 93 0 168 319 23 174 1.16e-27 113
Msa0832810 AT1G60890.2 31.771 192 130 1 128 319 7 197 2.97e-21 94.7
Msa0832810 AT1G60890.1 36.967 211 129 2 21 231 2 208 1.62e-34 133
Msa0832810 AT1G60890.1 38.830 188 114 1 99 286 11 197 9.39e-34 131
Msa0832810 AT1G60890.1 38.816 152 93 0 168 319 11 162 1.43e-27 113
Msa0832810 AT1G60890.1 32.240 183 124 0 137 319 3 185 4.16e-21 94.4
Msa0832810 AT1G10900.2 38.743 191 116 1 27 217 8 197 6.51e-34 132
Msa0832810 AT1G10900.2 37.968 187 115 1 100 286 12 197 1.90e-31 124
Msa0832810 AT1G10900.2 35.632 174 89 1 169 319 12 185 1.10e-24 105
Msa0832810 AT1G10900.1 38.743 191 116 1 27 217 8 197 6.51e-34 132
Msa0832810 AT1G10900.1 37.968 187 115 1 100 286 12 197 1.90e-31 124
Msa0832810 AT1G10900.1 35.632 174 89 1 169 319 12 185 1.10e-24 105
Msa0832810 AT1G10900.3 38.743 191 116 1 27 217 8 197 6.51e-34 132
Msa0832810 AT1G10900.3 37.968 187 115 1 100 286 12 197 1.90e-31 124
Msa0832810 AT1G10900.3 35.632 174 89 1 169 319 12 185 1.10e-24 105
Msa0832810 AT3G07960.2 38.462 195 119 1 93 287 21 214 3.82e-33 129
Msa0832810 AT3G07960.2 36.979 192 120 1 27 218 24 214 2.11e-31 124
Msa0832810 AT3G07960.2 36.076 158 101 0 162 319 21 178 4.45e-25 105
Msa0832810 AT3G07960.2 34.118 170 112 0 144 313 26 195 3.60e-23 100
Msa0832810 AT3G07960.4 38.462 195 119 1 93 287 21 214 3.82e-33 129
Msa0832810 AT3G07960.4 36.979 192 120 1 27 218 24 214 2.11e-31 124
Msa0832810 AT3G07960.4 36.076 158 101 0 162 319 21 178 4.45e-25 105
Msa0832810 AT3G07960.4 34.118 170 112 0 144 313 26 195 3.60e-23 100
Msa0832810 AT3G07960.3 38.462 195 119 1 93 287 21 214 4.66e-33 129
Msa0832810 AT3G07960.3 36.979 192 120 1 27 218 24 214 2.45e-31 124
Msa0832810 AT3G07960.3 36.076 158 101 0 162 319 21 178 4.66e-25 105
Msa0832810 AT3G07960.3 34.118 170 112 0 144 313 26 195 3.85e-23 100
Msa0832810 AT1G21980.1 40.230 174 104 0 27 200 73 246 4.88e-33 129
Msa0832810 AT1G21980.1 41.176 170 100 0 100 269 77 246 6.23e-32 126
Msa0832810 AT1G21980.1 40.397 151 90 0 169 319 77 227 2.01e-29 119
Msa0832810 AT1G21980.1 33.529 170 113 0 144 313 75 244 6.19e-22 97.1
Msa0832810 AT3G07960.1 38.462 195 119 1 93 287 21 214 1.48e-32 127
Msa0832810 AT3G07960.1 36.979 192 120 1 27 218 24 214 7.05e-31 123
Msa0832810 AT3G07960.1 36.076 158 101 0 162 319 21 178 9.88e-25 105
Msa0832810 AT3G07960.1 34.118 170 112 0 144 313 26 195 9.03e-23 99.4
Msa0832810 AT3G09920.3 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0832810 AT3G09920.3 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0832810 AT3G09920.3 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0832810 AT3G09920.4 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0832810 AT3G09920.4 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0832810 AT3G09920.4 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0832810 AT3G09920.2 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0832810 AT3G09920.2 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0832810 AT3G09920.2 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0832810 AT3G09920.1 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0832810 AT3G09920.1 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0832810 AT3G09920.1 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0832810 AT3G56960.2 37.306 193 120 1 93 285 66 257 6.10e-31 123
Msa0832810 AT3G56960.2 35.106 188 121 1 29 216 71 257 2.03e-26 110
Msa0832810 AT3G56960.2 34.857 175 91 1 162 313 66 240 9.20e-25 105
Msa0832810 AT3G56960.2 38.393 112 46 2 231 319 66 177 3.39e-15 76.6
Msa0832810 AT3G56960.1 37.306 193 120 1 93 285 66 257 6.10e-31 123
Msa0832810 AT3G56960.1 35.106 188 121 1 29 216 71 257 2.03e-26 110
Msa0832810 AT3G56960.1 34.857 175 91 1 162 313 66 240 9.20e-25 105
Msa0832810 AT3G56960.1 38.393 112 46 2 231 319 66 177 3.39e-15 76.6
Msa0832810 AT1G77740.2 36.517 178 113 0 27 204 74 251 1.20e-29 119
Msa0832810 AT1G77740.2 37.647 170 106 0 100 269 78 247 2.91e-28 115
Msa0832810 AT1G77740.2 37.748 151 94 0 169 319 78 228 2.56e-26 109
Msa0832810 AT1G77740.2 32.941 170 114 0 144 313 76 245 4.18e-22 97.4
Msa0832810 AT1G77740.1 36.517 178 113 0 27 204 74 251 1.20e-29 119
Msa0832810 AT1G77740.1 37.647 170 106 0 100 269 78 247 2.91e-28 115
Msa0832810 AT1G77740.1 37.748 151 94 0 169 319 78 228 2.56e-26 109
Msa0832810 AT1G77740.1 32.941 170 114 0 144 313 76 245 4.18e-22 97.4
Msa0832810 AT2G41210.1 37.306 193 120 1 93 285 64 255 1.66e-29 119
Msa0832810 AT2G41210.1 37.234 188 117 1 29 216 69 255 1.53e-27 113
Msa0832810 AT2G41210.1 36.571 175 88 1 162 313 64 238 7.38e-27 111
Msa0832810 AT2G41210.1 32.065 184 125 0 54 237 71 254 1.52e-17 84.0
Msa0832810 AT2G41210.1 36.134 119 52 3 224 319 58 175 1.20e-14 75.1
Msa0832810 AT2G26420.1 38.122 181 89 1 100 280 54 211 1.09e-27 113
Msa0832810 AT2G26420.1 35.196 179 114 1 141 319 28 204 3.30e-26 109
Msa0832810 AT2G26420.1 35.602 191 121 2 23 212 46 235 7.53e-24 102
Msa0832810 AT2G26420.2 38.122 181 89 1 100 280 54 211 1.20e-27 113
Msa0832810 AT2G26420.2 35.196 179 114 1 141 319 28 204 4.22e-26 108
Msa0832810 AT2G26420.2 35.602 191 121 2 23 212 46 235 9.54e-24 102
Msa0832810 AT2G26420.3 38.122 181 89 1 100 280 54 211 1.20e-27 113
Msa0832810 AT2G26420.3 35.196 179 114 1 141 319 28 204 4.22e-26 108
Msa0832810 AT2G26420.3 35.602 191 121 2 23 212 46 235 9.54e-24 102
Msa0832810 AT4G17080.1 33.333 192 105 1 99 290 257 425 1.05e-19 89.7
Msa0832810 AT4G17080.1 36.872 179 111 2 26 203 253 430 8.97e-19 87.0
Msa0832810 AT4G17080.1 35.099 151 98 0 168 318 257 407 1.09e-16 80.9
Msa0832810 AT4G17080.1 27.341 267 163 3 14 272 187 430 2.02e-15 77.0
Msa0832810 AT2G35170.1 34.337 166 109 0 125 290 229 394 1.38e-19 89.4
Msa0832810 AT2G35170.1 33.846 195 127 2 26 219 222 415 1.19e-18 86.7
Msa0832810 AT2G35170.1 30.435 184 127 1 135 318 194 376 2.94e-17 82.4
Msa0832810 AT2G35170.1 33.333 165 110 0 57 221 230 394 1.95e-15 77.0
Msa0832810 AT2G35170.1 28.014 282 192 4 1 277 155 430 3.56e-15 76.3
Msa0832810 AT2G35170.1 32.353 170 115 0 150 319 231 400 1.70e-13 71.2
Msa0832810 AT1G21920.2 32.642 193 107 1 99 291 174 343 3.49e-18 84.7
Msa0832810 AT1G21920.2 35.032 157 102 0 162 318 168 324 2.85e-17 82.0
Msa0832810 AT1G21920.2 35.196 179 114 2 26 203 170 347 1.17e-16 80.1
Msa0832810 AT1G21920.2 32.044 181 123 0 42 222 163 343 2.93e-15 76.3
Msa0832810 AT1G77660.1 32.653 196 132 0 105 300 161 356 6.89e-18 84.3
Msa0832810 AT1G77660.1 34.444 180 116 2 26 204 174 352 1.79e-15 77.0
Msa0832810 AT1G77660.1 33.758 157 104 0 162 318 172 328 5.68e-15 75.5
Msa0832810 AT1G77660.1 30.952 210 136 2 22 222 138 347 6.51e-14 72.4
Msa0832810 AT1G21920.1 32.642 193 107 1 99 291 174 343 7.64e-18 84.0
Msa0832810 AT1G21920.1 35.032 157 102 0 162 318 168 324 7.44e-17 81.3
Msa0832810 AT1G21920.1 35.196 179 114 2 26 203 170 347 3.53e-16 79.0
Msa0832810 AT1G21920.1 32.044 181 123 0 42 222 163 343 1.01e-14 74.7

Find 182 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCACATTAACTTACAATT+AGG 0.180527 5_4:+5965762 None:intergenic
GTCACTCTCCTTTCTGCAAT+TGG 0.259690 5_4:+5964895 None:intergenic
TTCACATTAACTTACAATTA+GGG 0.283635 5_4:+5965763 None:intergenic
ATTCAAGAGCGGTGTTTAAA+TGG 0.283979 5_4:-5963507 Msa0832810:exon
TACGAGGGTGATTGGGTTGA+TGG 0.301936 5_4:-5964070 Msa0832810:CDS
ATTACCTTGCATTGTCCATT+AGG 0.309389 5_4:+5964477 None:intergenic
GCTCGCCGCCTCGCCGGCGC+TGG 0.312747 5_4:+5965883 None:intergenic
CATCCCCGTTTGAATTTGTA+TGG 0.317731 5_4:+5963750 None:intergenic
GAGAAATATACGAGGGTGAT+TGG 0.320107 5_4:-5964078 Msa0832810:CDS
CTTCCCCATTTGAATTTGTA+TGG 0.323270 5_4:+5963543 None:intergenic
GTGATTGGGTTGATGGTAAA+AGG 0.336593 5_4:-5963649 Msa0832810:CDS
TTCTCTGGGAATTCCTTTCA+TGG 0.346086 5_4:-5963575 Msa0832810:CDS
GAACAATATATGAGGGTGAT+TGG 0.359146 5_4:-5963664 Msa0832810:CDS
GAACAATATATGAAGGTGAT+TGG 0.373787 5_4:-5963871 Msa0832810:CDS
AGTTGTGTCTTTGTTTGTAC+TGG 0.383860 5_4:+5964587 None:intergenic
TAATGTTTGGCCGCTTGCTT+TGG 0.387154 5_4:+5965920 None:intergenic
TATGAAGGTGATTGGGTTGA+TGG 0.396586 5_4:-5963863 Msa0832810:CDS
TGGGTTGATGGAAGCAGGGC+AGG 0.399450 5_4:-5963851 Msa0832810:CDS
TACCAGGGTGACTGGGTTGA+TGG 0.406579 5_4:-5964277 Msa0832810:CDS
GAACAATATACCAGGGTGAC+TGG 0.408003 5_4:-5964285 Msa0832810:CDS
TTGATGTAATTAGATGTGTT+AGG 0.408295 5_4:-5965253 Msa0832810:five_prime_UTR
GTGACCATCACGGGAATTCC+CGG 0.408677 5_4:+5963985 None:intergenic
ACTGATCTAGCATATATTCA+TGG 0.415521 5_4:-5963417 None:intergenic
GGCATCCATACAAATTCAAA+TGG 0.416878 5_4:-5963548 Msa0832810:CDS
TATGAGGGTGATTGGGTTGA+TGG 0.422414 5_4:-5963656 Msa0832810:CDS
CAACAGAGACTGAGTGTGAT+AGG 0.434059 5_4:+5966152 None:intergenic
CCAATGTAGACATCGCCATT+TGG 0.439353 5_4:+5964361 None:intergenic
CGCCGGCGCTGGTGTGGTGG+TGG 0.441445 5_4:+5965894 None:intergenic
ATGTGTACTTTCCCTTGCCA+TGG 0.441937 5_4:+5963903 None:intergenic
GTCAGATGGAACAATATATG+AGG 0.442982 5_4:-5963672 Msa0832810:CDS
GTTTGGCCGCTTGCTTTGGT+TGG 0.443176 5_4:+5965924 None:intergenic
TGGGTTGATGGAAGTAGGAC+AGG 0.444196 5_4:-5964058 Msa0832810:CDS
GTCGTGGCTCGCCGCCTCGC+CGG 0.446652 5_4:+5965877 None:intergenic
CCCTCAAAAGTTGTTCCTGA+TGG 0.450586 5_4:+5963809 None:intergenic
GTGATTGGGTTGATGGAAGC+AGG 0.451169 5_4:-5963856 Msa0832810:CDS
CCCTCAAAAGTTGTTCCTGA+TGG 0.451183 5_4:+5964016 None:intergenic
GAAGAATAGAGATCGCGTTA+AGG 0.453536 5_4:+5965949 None:intergenic
CCGCCTCGCCGGCGCTGGTG+TGG 0.454989 5_4:+5965888 None:intergenic
CCCTCAAAACTTGCTCCTGA+TGG 0.455757 5_4:+5963602 None:intergenic
GCATCCTTACAAAATCCAAC+GGG 0.457759 5_4:-5963961 Msa0832810:CDS
AGAAATATACGAGGGTGATT+GGG 0.463175 5_4:-5964077 Msa0832810:CDS
TTGCAGAATTTCTGATTGAA+AGG 0.464287 5_4:-5965999 Msa0832810:intron
AAGAATAGAGATCGCGTTAA+GGG 0.464835 5_4:+5965950 None:intergenic
TGTGTACTTTCCCTTGCCAT+GGG 0.466145 5_4:+5963904 None:intergenic
CAAATCAGAATCATAATTGA+AGG 0.467302 5_4:+5965726 None:intergenic
GGAAAGTACACATGGTCAAA+TGG 0.467614 5_4:-5963893 Msa0832810:CDS
GCACCCTTACAAAATCCAAT+GGG 0.467821 5_4:-5964168 Msa0832810:CDS
CCCTCAAAACTTGCTCCTGA+TGG 0.474150 5_4:+5964223 None:intergenic
GGAAGGTACACATGGTCAAA+TGG 0.475967 5_4:-5964307 Msa0832810:CDS
CTATCACACTCAGTCTCTGT+TGG 0.478474 5_4:-5966151 Msa0832810:five_prime_UTR
TTTGGCCGCTTGCTTTGGTT+GGG 0.479379 5_4:+5965925 None:intergenic
GGCACCCATACAAATTCAAA+CGG 0.480555 5_4:-5963755 Msa0832810:CDS
ACAATGAAACAAAGATGTGT+TGG 0.481474 5_4:-5965391 Msa0832810:five_prime_UTR
AAGGGTGCCGTGACCATGAC+GGG 0.483261 5_4:+5964183 None:intergenic
CAATGAAACAAAGATGTGTT+GGG 0.489810 5_4:-5965390 Msa0832810:five_prime_UTR
GGAAGAATCATATATCCATC+AGG 0.493374 5_4:-5963617 Msa0832810:CDS
GCATCCATACAAATTCAAAT+GGG 0.493721 5_4:-5963547 Msa0832810:CDS
AGCAGCGGCGGAAGCAGTGG+CGG 0.495012 5_4:+5964997 None:intergenic
AAGTGATCAAATGTTTCCTC+TGG 0.495346 5_4:-5964537 Msa0832810:exon
CAGATCTCAAATTGCACAGC+GGG 0.498602 5_4:-5964821 Msa0832810:five_prime_UTR
AAAGCGTACAGTGCATCTAT+AGG 0.500435 5_4:-5965169 Msa0832810:five_prime_UTR
GGGAATTCCTTTCATGGTCA+CGG 0.501081 5_4:-5963569 Msa0832810:CDS
TGGATGGAGAAGGAGGAGAT+TGG 0.501367 5_4:+5965855 None:intergenic
AAGGATGCCGTGACCATCAC+GGG 0.506087 5_4:+5963976 None:intergenic
CCTCGCCGGCGCTGGTGTGG+TGG 0.506763 5_4:+5965891 None:intergenic
GCACCCATACAAATTCAAAC+GGG 0.510990 5_4:-5963754 Msa0832810:CDS
CCAAATGGCGATGTCTACAT+TGG 0.511980 5_4:-5964361 Msa0832810:CDS
GGACGGATCATATATCCATC+AGG 0.513489 5_4:-5963824 Msa0832810:CDS
GAGTATGCGGCGGTGATGGA+TGG 0.513897 5_4:+5965839 None:intergenic
TTTCATTGTTCTACTGTCAC+AGG 0.513905 5_4:+5965314 None:intergenic
TGGGTTGATGGAAATAAGAC+AGG 0.514081 5_4:-5964265 Msa0832810:CDS
ATGTGAACTTTCCCTTGCCA+TGG 0.514104 5_4:+5963696 None:intergenic
AACAATATATGAAGGTGATT+GGG 0.516259 5_4:-5963870 Msa0832810:CDS
GGACGGATCATATTTCCATC+AGG 0.517140 5_4:-5964031 Msa0832810:CDS
CAGAATTTCTGATTGAAAGG+AGG 0.517444 5_4:-5965996 Msa0832810:five_prime_UTR
GGAGGAGTATGCGGCGGTGA+TGG 0.518932 5_4:+5965835 None:intergenic
GTGGTGGTGGATGTAATGTT+TGG 0.520296 5_4:+5965907 None:intergenic
GATGGAAGCAGGGCAGGGAA+TGG 0.522101 5_4:-5963845 Msa0832810:CDS
AACAATATATGAGGGTGATT+GGG 0.524240 5_4:-5963663 Msa0832810:CDS
ATTATGTAAAATATTATCAC+AGG 0.527974 5_4:+5965350 None:intergenic
TGAAGAATCGAAACAGAAGA+TGG 0.529600 5_4:+5965814 None:intergenic
TATCACACTCAGTCTCTGTT+GGG 0.531787 5_4:-5966150 Msa0832810:intron
AATTAACAAAATATTATCAC+AGG 0.534874 5_4:+5965213 None:intergenic
ATCAAATGTTTCCTCTGGCG+TGG 0.536997 5_4:-5964532 Msa0832810:exon
TGAAGCAGCGGCGGAAGCAG+TGG 0.537035 5_4:+5964994 None:intergenic
GAATAATAAGCAGAAAGGAA+TGG 0.539488 5_4:-5965433 Msa0832810:intron
TGGGTTGATGGTAAAAGGAA+AGG 0.541242 5_4:-5963644 Msa0832810:CDS
TTCTCTATGAATTCCTTCCA+TGG 0.541513 5_4:-5963782 Msa0832810:CDS
CACATCTCAAATTACACAGC+GGG 0.541810 5_4:-5966196 Msa0832810:five_prime_UTR
GATGGAAATAAGACAGGGAA+AGG 0.547349 5_4:-5964259 Msa0832810:CDS
AGGAATTCCCGTCATGGTCA+CGG 0.548090 5_4:-5964190 Msa0832810:CDS
TTGGAGCGATTCCGATGTTG+AGG 0.548124 5_4:+5964914 None:intergenic
GGGAATTCCCGTGATGGTCA+CGG 0.550448 5_4:-5963983 Msa0832810:CDS
GAAGCAGGGCAGGGAATGGA+CGG 0.550737 5_4:-5963841 Msa0832810:CDS
CTTACAATTAGGGTTTGTTG+TGG 0.551673 5_4:+5965773 None:intergenic
TTCTTTAGGAATTCCCGTCA+TGG 0.553202 5_4:-5964196 Msa0832810:CDS
GGGCGGATGATATATCCATC+AGG 0.554981 5_4:-5964238 Msa0832810:CDS
CTGTGCAATTTGAGATCTGT+AGG 0.556811 5_4:+5964825 None:intergenic
CCACACCAGCGCCGGCGAGG+CGG 0.558514 5_4:-5965888 Msa0832810:five_prime_UTR
TCCAATGGGGATGTCTACAT+TGG 0.559068 5_4:-5964154 Msa0832810:CDS
AACAATATACCAGGGTGACT+GGG 0.559210 5_4:-5964284 Msa0832810:CDS
GGAAAGTTCACATGGTCAGA+TGG 0.561789 5_4:-5963686 Msa0832810:CDS
TCAAATGGAACAATATATGA+AGG 0.561873 5_4:-5963878 Msa0832810:CDS
GCCAAGGGAAAACGTATGCA+TGG 0.563152 5_4:-5964334 Msa0832810:CDS
GTGATTGGGTTGATGGAAGT+AGG 0.563992 5_4:-5964063 Msa0832810:CDS
TACATTGGTAACTTCAAGAG+TGG 0.564708 5_4:-5963932 Msa0832810:CDS
GGGTTGATGGTAAAAGGAAA+GGG 0.564915 5_4:-5963643 Msa0832810:CDS
GTCAAATGGAACAATATACC+AGG 0.566493 5_4:-5964293 Msa0832810:CDS
GGAAAGTACACATGGTCAGA+TGG 0.566527 5_4:-5964100 Msa0832810:CDS
TGTGAACTTTCCCTTGCCAT+GGG 0.567031 5_4:+5963697 None:intergenic
ATGTGTACTTTCCCTTGCCG+TGG 0.568930 5_4:+5964110 None:intergenic
ATCCCCGTTTGAATTTGTAT+GGG 0.571408 5_4:+5963751 None:intergenic
ATCCACCACCACACCAGCGC+CGG 0.572065 5_4:-5965896 Msa0832810:five_prime_UTR
GAGAAGGAGGAGATTGGTCG+TGG 0.574118 5_4:+5965861 None:intergenic
ACCAATGTAGACATCCCCAT+TGG 0.574302 5_4:+5964153 None:intergenic
GGGAAAACGTATGCATGGCA+AGG 0.577918 5_4:-5964329 Msa0832810:CDS
TTCCATCAACCCAGTCACCC+TGG 0.578457 5_4:+5964275 None:intergenic
ATGAATTCCTTCCATGGTCA+CGG 0.581271 5_4:-5963776 Msa0832810:CDS
GGGTTGATGGAAGCAGGGCA+GGG 0.581422 5_4:-5963850 Msa0832810:CDS
ATCAATACAGATTGAAGCAG+CGG 0.584475 5_4:+5964982 None:intergenic
TGTTCCTAATGGACAATGCA+AGG 0.585680 5_4:-5964481 Msa0832810:intron
CCACCACACCAGCGCCGGCG+AGG 0.587224 5_4:-5965891 Msa0832810:five_prime_UTR
GGCACCCTTACAAAATCCAA+TGG 0.587279 5_4:-5964169 Msa0832810:CDS
ATGGATGCCGTGACCATGAA+AGG 0.589956 5_4:+5963562 None:intergenic
GAGTGGTTTACCCCATGGCA+AGG 0.591369 5_4:-5963915 Msa0832810:CDS
TTCAAGAGTGGTTTACCCCA+TGG 0.591425 5_4:-5963920 Msa0832810:CDS
GAAGTAGGACAGGGAAAGGA+CGG 0.592854 5_4:-5964048 Msa0832810:CDS
ACCAATGTAGATATCCCCGT+TGG 0.593680 5_4:+5963946 None:intergenic
TCAAATGGGGAAGTCTACAT+TGG 0.594144 5_4:-5963533 Msa0832810:CDS
CTCAACAAAGACAGAGTGGT+AGG 0.596007 5_4:+5964777 None:intergenic
AGATGCAGCTAGAATCTCGC+AGG 0.596399 5_4:+5964849 None:intergenic
AGATGCAGCTAGAATCTCGC+AGG 0.596399 5_4:+5966224 None:intergenic
TTGTATGGGTGCCGTGACCA+TGG 0.597002 5_4:+5963765 None:intergenic
TACATTGGTAACTTCAAGAG+CGG 0.599946 5_4:-5963725 Msa0832810:CDS
TCAAACGGGGATGTCTACAT+TGG 0.601101 5_4:-5963740 Msa0832810:CDS
TAAGGATGCCGTGACCATCA+CGG 0.601999 5_4:+5963975 None:intergenic
ATGGGTGCCGTGACCATGGA+AGG 0.602986 5_4:+5963769 None:intergenic
GATGGAAGTAGGACAGGGAA+AGG 0.603067 5_4:-5964052 Msa0832810:CDS
GAATCGCTCCAATTGCAGAA+AGG 0.604911 5_4:-5964903 Msa0832810:five_prime_UTR
TCCAACGGGGATATCTACAT+TGG 0.609663 5_4:-5963947 Msa0832810:CDS
GGCATCCTTACAAAATCCAA+CGG 0.609974 5_4:-5963962 Msa0832810:CDS
ATCTCCGGGAATTCCCGTGA+TGG 0.610724 5_4:-5963989 Msa0832810:CDS
GCGGTGATGGATGGAGAAGG+AGG 0.610844 5_4:+5965848 None:intergenic
ACAGAAGATGGAGGAGTATG+CGG 0.612832 5_4:+5965826 None:intergenic
GATGGTAAAAGGAAAGGGAA+AGG 0.614671 5_4:-5963638 Msa0832810:CDS
TGATTGGGTTGATGGAAGCA+GGG 0.615378 5_4:-5963855 Msa0832810:CDS
AACGTATGCATGGCAAGGGA+AGG 0.615379 5_4:-5964324 Msa0832810:CDS
TTTAAATGGAACAATACATG+AGG 0.616976 5_4:-5963493 Msa0832810:exon
TAAGGGTGCCGTGACCATGA+CGG 0.617165 5_4:+5964182 None:intergenic
AGTGGTTTACCCCATGGCAA+GGG 0.619762 5_4:-5963914 Msa0832810:CDS
GGAAAACGTATGCATGGCAA+GGG 0.631325 5_4:-5964328 Msa0832810:CDS
CTGTGTAATTTGAGATGTGT+AGG 0.632816 5_4:+5966200 None:intergenic
CTTCTCCCAACCAAAGCAAG+CGG 0.637042 5_4:-5965930 Msa0832810:five_prime_UTR
GTGTACTTTCCCTTGCCATG+GGG 0.639386 5_4:+5963905 None:intergenic
ATGGAAATAAGACAGGGAAA+GGG 0.639466 5_4:-5964258 Msa0832810:CDS
GCGGCGGTGATGGATGGAGA+AGG 0.641167 5_4:+5965845 None:intergenic
TAACAACTCAACCTCAACAT+CGG 0.644255 5_4:-5964925 Msa0832810:five_prime_UTR
GAAATAAGACAGGGAAAGGG+CGG 0.648043 5_4:-5964255 Msa0832810:CDS
GGGTTGATGGAAGTAGGACA+GGG 0.648539 5_4:-5964057 Msa0832810:CDS
TCAGATGGAACAATATATGA+GGG 0.653226 5_4:-5963671 Msa0832810:CDS
AGAATCGAAACAGAAGATGG+AGG 0.653768 5_4:+5965817 None:intergenic
TATTCTAAAATCCACGCCAG+AGG 0.656524 5_4:+5964521 None:intergenic
AATACAGATTGAAGCAGCGG+CGG 0.663648 5_4:+5964985 None:intergenic
TACATTGGTAAATTCAAGAG+CGG 0.664149 5_4:-5963518 Msa0832810:CDS
CACCCATACAAATTCAAACG+GGG 0.664180 5_4:-5963753 Msa0832810:CDS
CATCCATACAAATTCAAATG+GGG 0.672466 5_4:-5963546 Msa0832810:CDS
ATGGCAAGGGAAAGTTCACA+TGG 0.680438 5_4:-5963694 Msa0832810:CDS
ATGGCAAGGGAAAGTACACA+TGG 0.692208 5_4:-5963901 Msa0832810:CDS
GAAGATGGAGGAGTATGCGG+CGG 0.693351 5_4:+5965829 None:intergenic
TTAAATGGAACAATACATGA+GGG 0.693624 5_4:-5963492 Msa0832810:exon
ATGGCAAGGGAAGGTACACA+TGG 0.694407 5_4:-5964315 Msa0832810:CDS
GTCAGATGGAGAAATATACG+AGG 0.704885 5_4:-5964086 Msa0832810:CDS
GAGGGTAAATTATCTGACCG+AGG 0.706129 5_4:-5963474 Msa0832810:three_prime_UTR
TCAAATGGAACAATATACCA+GGG 0.706440 5_4:-5964292 Msa0832810:CDS
ACGGCAAGGGAAAGTACACA+TGG 0.716405 5_4:-5964108 Msa0832810:CDS
CACCCTTACAAAATCCAATG+GGG 0.726402 5_4:-5964167 Msa0832810:CDS
TTTACTCAACAAAGACAGAG+TGG 0.729785 5_4:+5964773 None:intergenic
GGGTTGATGGAAATAAGACA+GGG 0.735273 5_4:-5964264 Msa0832810:CDS
TCAGATGGAGAAATATACGA+GGG 0.740857 5_4:-5964085 Msa0832810:CDS
CATCCTTACAAAATCCAACG+GGG 0.776072 5_4:-5963960 Msa0832810:CDS
ACACATCTCAAATTACACAG+CGG 0.777933 5_4:-5966197 Msa0832810:five_prime_UTR
ACAGATCTCAAATTGCACAG+CGG 0.789007 5_4:-5964822 Msa0832810:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTTAAGATG+GGG + chr5_4:5963626-5963645 None:intergenic 10.0%
!!! AATTAATTTTCAATAATAAG+CGG + chr5_4:5965045-5965064 None:intergenic 10.0%
!!! TTTTTTTTATTTTAAGATGG+GGG + chr5_4:5963625-5963644 None:intergenic 15.0%
!! ATTATGTAAAATATTATCAC+AGG + chr5_4:5964337-5964356 None:intergenic 15.0%
!! AATTAACAAAATATTATCAC+AGG + chr5_4:5964474-5964493 None:intergenic 15.0%
!!! TTTATTTTGTTAATTTCACT+TGG - chr5_4:5964492-5964511 Msa0832810:CDS 15.0%
!!! ATTTTAGTTTATTTTGATTG+TGG - chr5_4:5964631-5964650 Msa0832810:intron 15.0%
!!! TTTTAGTTTATTTTGATTGT+GGG - chr5_4:5964632-5964651 Msa0832810:intron 15.0%
!!! TTTTATCCTTTTTAGTATTA+TGG - chr5_4:5966241-5966260 Msa0832810:five_prime_UTR 15.0%
!! AAATTCTGCAAATTAATGAA+GGG + chr5_4:5963676-5963695 None:intergenic 20.0%
!! TTCACATTAACTTACAATTA+GGG + chr5_4:5963924-5963943 None:intergenic 20.0%
!! TTTCACATTAACTTACAATT+AGG + chr5_4:5963925-5963944 None:intergenic 20.0%
!!! TAGTTTAAATTTTGAACGAT+CGG - chr5_4:5964559-5964578 Msa0832810:five_prime_UTR 20.0%
!! AGGATAAAAATAATTTACCT+CGG + chr5_4:5966230-5966249 None:intergenic 20.0%
!!! AGTTTTCCATAATACTAAAA+AGG + chr5_4:5966250-5966269 None:intergenic 20.0%
! GAAATTCTGCAAATTAATGA+AGG + chr5_4:5963677-5963696 None:intergenic 25.0%
! CAAATCAGAATCATAATTGA+AGG + chr5_4:5963961-5963980 None:intergenic 25.0%
!!! TTTTTTAGGGTTATTTGCAT+TGG - chr5_4:5964034-5964053 Msa0832810:CDS 25.0%
!!! TTTTTAGGGTTATTTGCATT+GGG - chr5_4:5964035-5964054 Msa0832810:CDS 25.0%
!!! ATTGGGATTGTTTTGTTTTT+AGG - chr5_4:5964052-5964071 Msa0832810:CDS 25.0%
!!! TTGGGATTGTTTTGTTTTTA+GGG - chr5_4:5964053-5964072 Msa0832810:CDS 25.0%
! TTGATGTAATTAGATGTGTT+AGG - chr5_4:5964431-5964450 Msa0832810:intron 25.0%
!!! TCTGTATTGATTTGATTTTG+AGG - chr5_4:5964714-5964733 Msa0832810:intron 25.0%
! AATACATGGATATAGAATAG+TGG + chr5_4:5965249-5965268 None:intergenic 25.0%
! TCAAATGGAACAATATATGA+AGG - chr5_4:5965806-5965825 Msa0832810:five_prime_UTR 25.0%
! AACAATATATGAAGGTGATT+GGG - chr5_4:5965814-5965833 Msa0832810:five_prime_UTR 25.0%
! TTTAAATGGAACAATACATG+AGG - chr5_4:5966191-5966210 Msa0832810:five_prime_UTR 25.0%
! TTAAATGGAACAATACATGA+GGG - chr5_4:5966192-5966211 Msa0832810:five_prime_UTR 25.0%
!!! TTTTTATTTTAAGATGGGGG+TGG + chr5_4:5963622-5963641 None:intergenic 30.0%
TTGCAGAATTTCTGATTGAA+AGG - chr5_4:5963685-5963704 Msa0832810:CDS 30.0%
!!! ACTTCCATCTGTTGTTTTTT+AGG - chr5_4:5964020-5964039 Msa0832810:CDS 30.0%
!!! CTTCCATCTGTTGTTTTTTA+GGG - chr5_4:5964021-5964040 Msa0832810:CDS 30.0%
TAACCCTAAAAAACAACAGA+TGG + chr5_4:5964027-5964046 None:intergenic 30.0%
TCAGAGAATAATAAGCAGAA+AGG - chr5_4:5964246-5964265 Msa0832810:CDS 30.0%
GAATAATAAGCAGAAAGGAA+TGG - chr5_4:5964251-5964270 Msa0832810:CDS 30.0%
ACAATGAAACAAAGATGTGT+TGG - chr5_4:5964293-5964312 Msa0832810:CDS 30.0%
CAATGAAACAAAGATGTGTT+GGG - chr5_4:5964294-5964313 Msa0832810:CDS 30.0%
! CTATTTTCGATTTACTGTCT+TGG - chr5_4:5965015-5965034 Msa0832810:five_prime_UTR 30.0%
AAGCAGTCTGAAAAAACATA+TGG + chr5_4:5965077-5965096 None:intergenic 30.0%
!!! CTTGTTTTACTTGTTCCTAA+TGG - chr5_4:5965192-5965211 Msa0832810:five_prime_UTR 30.0%
GAGATGACAATCATAATACA+TGG + chr5_4:5965263-5965282 None:intergenic 30.0%
AATGCTTCACTTTAAACCTA+GGG + chr5_4:5965301-5965320 None:intergenic 30.0%
AAATGCTTCACTTTAAACCT+AGG + chr5_4:5965302-5965321 None:intergenic 30.0%
!! AAAGTGAAGCATTTTCCAAA+TGG - chr5_4:5965308-5965327 Msa0832810:five_prime_UTR 30.0%
TCAAATGGAACAATATACCA+GGG - chr5_4:5965392-5965411 Msa0832810:five_prime_UTR 30.0%
GAACAATATATGAAGGTGAT+TGG - chr5_4:5965813-5965832 Msa0832810:five_prime_UTR 30.0%
TCAGATGGAACAATATATGA+GGG - chr5_4:5966013-5966032 Msa0832810:intron 30.0%
AACAATATATGAGGGTGATT+GGG - chr5_4:5966021-5966040 Msa0832810:intron 30.0%
GCATCCATACAAATTCAAAT+GGG - chr5_4:5966137-5966156 Msa0832810:intron 30.0%
CATCCATACAAATTCAAATG+GGG - chr5_4:5966138-5966157 Msa0832810:intron 30.0%
TACATTGGTAAATTCAAGAG+CGG - chr5_4:5966166-5966185 Msa0832810:five_prime_UTR 30.0%
! CTGTGTAATTTGAGATGTGT+AGG + chr5_4:5963487-5963506 None:intergenic 35.0%
ACACATCTCAAATTACACAG+CGG - chr5_4:5963487-5963506 Msa0832810:three_prime_UTR 35.0%
CACTTCACTTTACTTCAATC+CGG - chr5_4:5963562-5963581 Msa0832810:CDS 35.0%
CAGAATTTCTGATTGAAAGG+AGG - chr5_4:5963688-5963707 Msa0832810:CDS 35.0%
AAGAATAGAGATCGCGTTAA+GGG + chr5_4:5963737-5963756 None:intergenic 35.0%
TGAAGAATCGAAACAGAAGA+TGG + chr5_4:5963873-5963892 None:intergenic 35.0%
!! CTTACAATTAGGGTTTGTTG+TGG + chr5_4:5963914-5963933 None:intergenic 35.0%
ACAGATGGAAGTAAAACTCA+AGG + chr5_4:5964012-5964031 None:intergenic 35.0%
TTTCATTGTTCTACTGTCAC+AGG + chr5_4:5964373-5964392 None:intergenic 35.0%
!!! TTATTTTGATTGTGGGTTGC+CGG - chr5_4:5964639-5964658 Msa0832810:intron 35.0%
ATCAATACAGATTGAAGCAG+CGG + chr5_4:5964705-5964724 None:intergenic 35.0%
TAACAACTCAACCTCAACAT+CGG - chr5_4:5964759-5964778 Msa0832810:intron 35.0%
TTTACTCAACAAAGACAGAG+TGG + chr5_4:5964914-5964933 None:intergenic 35.0%
! AGTTGTGTCTTTGTTTGTAC+TGG + chr5_4:5965100-5965119 None:intergenic 35.0%
AAGTGATCAAATGTTTCCTC+TGG - chr5_4:5965147-5965166 Msa0832810:five_prime_UTR 35.0%
ATTACCTTGCATTGTCCATT+AGG + chr5_4:5965210-5965229 None:intergenic 35.0%
GTCAAATGGAACAATATACC+AGG - chr5_4:5965391-5965410 Msa0832810:five_prime_UTR 35.0%
ATGGAAATAAGACAGGGAAA+GGG - chr5_4:5965426-5965445 Msa0832810:intron 35.0%
! ATCCCCATTGGATTTTGTAA+GGG + chr5_4:5965522-5965541 None:intergenic 35.0%
! TTCGAGAATGATCTTTTCCA+CGG - chr5_4:5965557-5965576 Msa0832810:intron 35.0%
TCAGATGGAGAAATATACGA+GGG - chr5_4:5965599-5965618 Msa0832810:intron 35.0%
AGAAATATACGAGGGTGATT+GGG - chr5_4:5965607-5965626 Msa0832810:intron 35.0%
! TACATTGGTAACTTCAAGAG+TGG - chr5_4:5965752-5965771 Msa0832810:five_prime_UTR 35.0%
TTCTCTATGAATTCCTTCCA+TGG - chr5_4:5965902-5965921 Msa0832810:five_prime_UTR 35.0%
ATCCCCGTTTGAATTTGTAT+GGG + chr5_4:5965936-5965955 None:intergenic 35.0%
! TACATTGGTAACTTCAAGAG+CGG - chr5_4:5965752-5965771 Msa0832810:five_prime_UTR 35.0%
GTCAGATGGAACAATATATG+AGG - chr5_4:5966012-5966031 Msa0832810:intron 35.0%
GAACAATATATGAGGGTGAT+TGG - chr5_4:5966020-5966039 Msa0832810:intron 35.0%
GGAAGAATCATATATCCATC+AGG - chr5_4:5966067-5966086 Msa0832810:intron 35.0%
GGCATCCATACAAATTCAAA+TGG - chr5_4:5966136-5966155 Msa0832810:intron 35.0%
CTTCCCCATTTGAATTTGTA+TGG + chr5_4:5966144-5966163 None:intergenic 35.0%
ATTCAAGAGCGGTGTTTAAA+TGG - chr5_4:5966177-5966196 Msa0832810:five_prime_UTR 35.0%
CACATCTCAAATTACACAGC+GGG - chr5_4:5963488-5963507 Msa0832810:three_prime_UTR 40.0%
TATCACACTCAGTCTCTGTT+GGG - chr5_4:5963534-5963553 Msa0832810:CDS 40.0%
CGGATTGAAGTAAAGTGAAG+TGG + chr5_4:5963564-5963583 None:intergenic 40.0%
TTCACTTTACTTCAATCCGG+TGG - chr5_4:5963565-5963584 Msa0832810:CDS 40.0%
!!! TTATTTTAAGATGGGGGTGG+CGG + chr5_4:5963619-5963638 None:intergenic 40.0%
GAAGAATAGAGATCGCGTTA+AGG + chr5_4:5963738-5963757 None:intergenic 40.0%
AGAATCGAAACAGAAGATGG+AGG + chr5_4:5963870-5963889 None:intergenic 40.0%
CGCTGGATATTACAAGCTTA+TGG + chr5_4:5964116-5964135 None:intergenic 40.0%
AAAGCGTACAGTGCATCTAT+AGG - chr5_4:5964515-5964534 Msa0832810:CDS 40.0%
GAGCCAGACAAAAAAGTTTG+GGG + chr5_4:5964668-5964687 None:intergenic 40.0%
GGAGCCAGACAAAAAAGTTT+GGG + chr5_4:5964669-5964688 None:intergenic 40.0%
! CTGTGCAATTTGAGATCTGT+AGG + chr5_4:5964862-5964881 None:intergenic 40.0%
ACAGATCTCAAATTGCACAG+CGG - chr5_4:5964862-5964881 Msa0832810:five_prime_UTR 40.0%
ACAGACAGAGTGAAGTGAAA+TGG + chr5_4:5964937-5964956 None:intergenic 40.0%
!! TATTCTAAAATCCACGCCAG+AGG + chr5_4:5965166-5965185 None:intergenic 40.0%
! TGTTCCTAATGGACAATGCA+AGG - chr5_4:5965203-5965222 Msa0832810:five_prime_UTR 40.0%
CATCGTTTCTTGTAATCCCT+AGG - chr5_4:5965282-5965301 Msa0832810:five_prime_UTR 40.0%
!!! TGTCTACATTGGTTTTGCCA+AGG - chr5_4:5965334-5965353 Msa0832810:five_prime_UTR 40.0%
!!! GTCTACATTGGTTTTGCCAA+GGG - chr5_4:5965335-5965354 Msa0832810:five_prime_UTR 40.0%
AACAATATACCAGGGTGACT+GGG - chr5_4:5965400-5965419 Msa0832810:five_prime_UTR 40.0%
!! TGGGTTGATGGAAATAAGAC+AGG - chr5_4:5965419-5965438 Msa0832810:five_prime_UTR 40.0%
!! GGGTTGATGGAAATAAGACA+GGG - chr5_4:5965420-5965439 Msa0832810:five_prime_UTR 40.0%
GATGGAAATAAGACAGGGAA+AGG - chr5_4:5965425-5965444 Msa0832810:intron 40.0%
!!! GTTTTGAGGGTGGATTCTTT+AGG - chr5_4:5965474-5965493 Msa0832810:intron 40.0%
! TTCTTTAGGAATTCCCGTCA+TGG - chr5_4:5965488-5965507 Msa0832810:intron 40.0%
GCACCCTTACAAAATCCAAT+GGG - chr5_4:5965516-5965535 Msa0832810:intron 40.0%
CACCCTTACAAAATCCAATG+GGG - chr5_4:5965517-5965536 Msa0832810:intron 40.0%
! CATCCCCATTGGATTTTGTA+AGG + chr5_4:5965523-5965542 None:intergenic 40.0%
! AATGATCTTTTCCACGGCAA+GGG - chr5_4:5965563-5965582 Msa0832810:intron 40.0%
GTCAGATGGAGAAATATACG+AGG - chr5_4:5965598-5965617 Msa0832810:intron 40.0%
GAGAAATATACGAGGGTGAT+TGG - chr5_4:5965606-5965625 Msa0832810:intron 40.0%
! TCCATCAGGAACAACTTTTG+AGG - chr5_4:5965667-5965686 Msa0832810:intron 40.0%
! CCATCAGGAACAACTTTTGA+GGG - chr5_4:5965668-5965687 Msa0832810:intron 40.0%
!! ACTTTTGAGGGTGAAATCTC+CGG - chr5_4:5965680-5965699 Msa0832810:intron 40.0%
GGCATCCTTACAAAATCCAA+CGG - chr5_4:5965722-5965741 Msa0832810:five_prime_UTR 40.0%
GCATCCTTACAAAATCCAAC+GGG - chr5_4:5965723-5965742 Msa0832810:five_prime_UTR 40.0%
CATCCTTACAAAATCCAACG+GGG - chr5_4:5965724-5965743 Msa0832810:five_prime_UTR 40.0%
! TATCCCCGTTGGATTTTGTA+AGG + chr5_4:5965730-5965749 None:intergenic 40.0%
! GGAAAGTACACATGGTCAAA+TGG - chr5_4:5965791-5965810 Msa0832810:five_prime_UTR 40.0%
!! TATGAAGGTGATTGGGTTGA+TGG - chr5_4:5965821-5965840 Msa0832810:five_prime_UTR 40.0%
! TCCATCAGGAACAACTTTTG+AGG - chr5_4:5965667-5965686 Msa0832810:intron 40.0%
! CCATCAGGAACAACTTTTGA+GGG - chr5_4:5965668-5965687 Msa0832810:intron 40.0%
ATGAATTCCTTCCATGGTCA+CGG - chr5_4:5965908-5965927 Msa0832810:five_prime_UTR 40.0%
GGCACCCATACAAATTCAAA+CGG - chr5_4:5965929-5965948 Msa0832810:five_prime_UTR 40.0%
GCACCCATACAAATTCAAAC+GGG - chr5_4:5965930-5965949 Msa0832810:five_prime_UTR 40.0%
CACCCATACAAATTCAAACG+GGG - chr5_4:5965931-5965950 Msa0832810:five_prime_UTR 40.0%
CATCCCCGTTTGAATTTGTA+TGG + chr5_4:5965937-5965956 None:intergenic 40.0%
!! GTGATTGGGTTGATGGTAAA+AGG - chr5_4:5966035-5966054 Msa0832810:intron 40.0%
!! TGGGTTGATGGTAAAAGGAA+AGG - chr5_4:5966040-5966059 Msa0832810:intron 40.0%
!! GGGTTGATGGTAAAAGGAAA+GGG - chr5_4:5966041-5966060 Msa0832810:intron 40.0%
GATGGTAAAAGGAAAGGGAA+AGG - chr5_4:5966046-5966065 Msa0832810:intron 40.0%
! TTCTCTGGGAATTCCTTTCA+TGG - chr5_4:5966109-5966128 Msa0832810:intron 40.0%
TCAAATGGGGAAGTCTACAT+TGG - chr5_4:5966151-5966170 Msa0832810:five_prime_UTR 40.0%
CAACAGAGACTGAGTGTGAT+AGG + chr5_4:5963535-5963554 None:intergenic 45.0%
CTATCACACTCAGTCTCTGT+TGG - chr5_4:5963533-5963552 Msa0832810:CDS 45.0%
ACTTTACTTCAATCCGGTGG+CGG - chr5_4:5963568-5963587 Msa0832810:CDS 45.0%
TAATGTTTGGCCGCTTGCTT+TGG + chr5_4:5963767-5963786 None:intergenic 45.0%
!! GTGGTGGTGGATGTAATGTT+TGG + chr5_4:5963780-5963799 None:intergenic 45.0%
! ACAGAAGATGGAGGAGTATG+CGG + chr5_4:5963861-5963880 None:intergenic 45.0%
! ACAAAAAAGTTTGGGGTGGC+CGG + chr5_4:5964661-5964680 None:intergenic 45.0%
CCAGACAAAAAAGTTTGGGG+TGG + chr5_4:5964665-5964684 None:intergenic 45.0%
!!! CCACCCCAAACTTTTTTGTC+TGG - chr5_4:5964662-5964681 Msa0832810:intron 45.0%
CGGAGCCAGACAAAAAAGTT+TGG + chr5_4:5964670-5964689 None:intergenic 45.0%
AATACAGATTGAAGCAGCGG+CGG + chr5_4:5964702-5964721 None:intergenic 45.0%
GAATCGCTCCAATTGCAGAA+AGG - chr5_4:5964781-5964800 Msa0832810:intron 45.0%
GTCACTCTCCTTTCTGCAAT+TGG + chr5_4:5964792-5964811 None:intergenic 45.0%
CAGATCTCAAATTGCACAGC+GGG - chr5_4:5964863-5964882 Msa0832810:five_prime_UTR 45.0%
CTCAACAAAGACAGAGTGGT+AGG + chr5_4:5964910-5964929 None:intergenic 45.0%
ATCAAATGTTTCCTCTGGCG+TGG - chr5_4:5965152-5965171 Msa0832810:five_prime_UTR 45.0%
CCAATGTAGACATCGCCATT+TGG + chr5_4:5965326-5965345 None:intergenic 45.0%
CCAAATGGCGATGTCTACAT+TGG - chr5_4:5965323-5965342 Msa0832810:five_prime_UTR 45.0%
GGAAAACGTATGCATGGCAA+GGG - chr5_4:5965356-5965375 Msa0832810:five_prime_UTR 45.0%
! GGAAGGTACACATGGTCAAA+TGG - chr5_4:5965377-5965396 Msa0832810:five_prime_UTR 45.0%
GAACAATATACCAGGGTGAC+TGG - chr5_4:5965399-5965418 Msa0832810:five_prime_UTR 45.0%
GAAATAAGACAGGGAAAGGG+CGG - chr5_4:5965429-5965448 Msa0832810:intron 45.0%
! TCCATCAGGAGCAAGTTTTG+AGG - chr5_4:5965460-5965479 Msa0832810:intron 45.0%
!! CCATCAGGAGCAAGTTTTGA+GGG - chr5_4:5965461-5965480 Msa0832810:intron 45.0%
GGCACCCTTACAAAATCCAA+TGG - chr5_4:5965515-5965534 Msa0832810:intron 45.0%
TCCAATGGGGATGTCTACAT+TGG - chr5_4:5965530-5965549 Msa0832810:intron 45.0%
ACCAATGTAGACATCCCCAT+TGG + chr5_4:5965534-5965553 None:intergenic 45.0%
! GAATGATCTTTTCCACGGCA+AGG - chr5_4:5965562-5965581 Msa0832810:intron 45.0%
! GGAAAGTACACATGGTCAGA+TGG - chr5_4:5965584-5965603 Msa0832810:intron 45.0%
!! GTGATTGGGTTGATGGAAGT+AGG - chr5_4:5965621-5965640 Msa0832810:intron 45.0%
GGACGGATCATATTTCCATC+AGG - chr5_4:5965653-5965672 Msa0832810:intron 45.0%
CCCTCAAAAGTTGTTCCTGA+TGG + chr5_4:5965671-5965690 None:intergenic 45.0%
!! CTTTTGAGGGTGAAATCTCC+GGG - chr5_4:5965681-5965700 Msa0832810:intron 45.0%
TCCAACGGGGATATCTACAT+TGG - chr5_4:5965737-5965756 Msa0832810:five_prime_UTR 45.0%
ACCAATGTAGATATCCCCGT+TGG + chr5_4:5965741-5965760 None:intergenic 45.0%
TTCAAGAGTGGTTTACCCCA+TGG - chr5_4:5965764-5965783 Msa0832810:five_prime_UTR 45.0%
TGTGTACTTTCCCTTGCCAT+GGG + chr5_4:5965783-5965802 None:intergenic 45.0%
ATGTGTACTTTCCCTTGCCA+TGG + chr5_4:5965784-5965803 None:intergenic 45.0%
! ATGGCAAGGGAAAGTACACA+TGG - chr5_4:5965783-5965802 Msa0832810:five_prime_UTR 45.0%
!! TGATTGGGTTGATGGAAGCA+GGG - chr5_4:5965829-5965848 Msa0832810:five_prime_UTR 45.0%
GGACGGATCATATATCCATC+AGG - chr5_4:5965860-5965879 Msa0832810:five_prime_UTR 45.0%
CCCTCAAAAGTTGTTCCTGA+TGG + chr5_4:5965671-5965690 None:intergenic 45.0%
TCAAACGGGGATGTCTACAT+TGG - chr5_4:5965944-5965963 Msa0832810:five_prime_UTR 45.0%
! TTCAAGAGCGGTTTTTCCCA+TGG - chr5_4:5965971-5965990 Msa0832810:five_prime_UTR 45.0%
TGTGAACTTTCCCTTGCCAT+GGG + chr5_4:5965990-5966009 None:intergenic 45.0%
ATGTGAACTTTCCCTTGCCA+TGG + chr5_4:5965991-5966010 None:intergenic 45.0%
ATGGCAAGGGAAAGTTCACA+TGG - chr5_4:5965990-5966009 Msa0832810:five_prime_UTR 45.0%
GGAAAGTTCACATGGTCAGA+TGG - chr5_4:5965998-5966017 Msa0832810:intron 45.0%
!! TATGAGGGTGATTGGGTTGA+TGG - chr5_4:5966028-5966047 Msa0832810:intron 45.0%
! TCCATCAGGAGCAAGTTTTG+AGG - chr5_4:5965460-5965479 Msa0832810:intron 45.0%
!! CCATCAGGAGCAAGTTTTGA+GGG - chr5_4:5965461-5965480 Msa0832810:intron 45.0%
!!! AGTTTTGAGGGCGAATTCTC+TGG - chr5_4:5966094-5966113 Msa0832810:intron 45.0%
!!! GTTTTGAGGGCGAATTCTCT+GGG - chr5_4:5966095-5966114 Msa0832810:intron 45.0%
GGGAATTCCTTTCATGGTCA+CGG - chr5_4:5966115-5966134 Msa0832810:intron 45.0%
GAGGGTAAATTATCTGACCG+AGG - chr5_4:5966210-5966229 Msa0832810:five_prime_UTR 45.0%
!!! TTTTTTTTTTATTTTAAGAT+GGG + chr5_4:5963627-5963646 None:intergenic 5.0%
!!! TTTTTTTTTTTATTTTAAGA+TGG + chr5_4:5963628-5963647 None:intergenic 5.0%
!! TAAAAAAAAAAATTATATAC+TGG - chr5_4:5963636-5963655 Msa0832810:CDS 5.0%
AGATGCAGCTAGAATCTCGC+AGG + chr5_4:5963463-5963482 None:intergenic 50.0%
CTTCTCCCAACCAAAGCAAG+CGG - chr5_4:5963754-5963773 Msa0832810:CDS 50.0%
TTTGGCCGCTTGCTTTGGTT+GGG + chr5_4:5963762-5963781 None:intergenic 50.0%
TGGATGGAGAAGGAGGAGAT+TGG + chr5_4:5963832-5963851 None:intergenic 50.0%
CTGTTATCACTTTGCAGCGC+TGG + chr5_4:5964133-5964152 None:intergenic 50.0%
TTGGAGCGATTCCGATGTTG+AGG + chr5_4:5964773-5964792 None:intergenic 50.0%
AGATGCAGCTAGAATCTCGC+AGG + chr5_4:5963463-5963482 None:intergenic 50.0%
GCCAAGGGAAAACGTATGCA+TGG - chr5_4:5965350-5965369 Msa0832810:five_prime_UTR 50.0%
! GCCATGCATACGTTTTCCCT+TGG + chr5_4:5965354-5965373 None:intergenic 50.0%
GGGAAAACGTATGCATGGCA+AGG - chr5_4:5965355-5965374 Msa0832810:five_prime_UTR 50.0%
AACGTATGCATGGCAAGGGA+AGG - chr5_4:5965360-5965379 Msa0832810:five_prime_UTR 50.0%
! ATGGCAAGGGAAGGTACACA+TGG - chr5_4:5965369-5965388 Msa0832810:five_prime_UTR 50.0%
GGGCGGATGATATATCCATC+AGG - chr5_4:5965446-5965465 Msa0832810:intron 50.0%
! CCCTCAAAACTTGCTCCTGA+TGG + chr5_4:5965464-5965483 None:intergenic 50.0%
!!! TCAGGAGCAAGTTTTGAGGG+TGG - chr5_4:5965464-5965483 Msa0832810:intron 50.0%
AGGAATTCCCGTCATGGTCA+CGG - chr5_4:5965494-5965513 Msa0832810:intron 50.0%
ATGTGTACTTTCCCTTGCCG+TGG + chr5_4:5965577-5965596 None:intergenic 50.0%
! ACGGCAAGGGAAAGTACACA+TGG - chr5_4:5965576-5965595 Msa0832810:intron 50.0%
!! TACGAGGGTGATTGGGTTGA+TGG - chr5_4:5965614-5965633 Msa0832810:intron 50.0%
!! TGGGTTGATGGAAGTAGGAC+AGG - chr5_4:5965626-5965645 Msa0832810:intron 50.0%
!! GGGTTGATGGAAGTAGGACA+GGG - chr5_4:5965627-5965646 Msa0832810:intron 50.0%
GATGGAAGTAGGACAGGGAA+AGG - chr5_4:5965632-5965651 Msa0832810:intron 50.0%
GAAGTAGGACAGGGAAAGGA+CGG - chr5_4:5965636-5965655 Msa0832810:intron 50.0%
TAAGGATGCCGTGACCATCA+CGG + chr5_4:5965712-5965731 None:intergenic 50.0%
AGTGGTTTACCCCATGGCAA+GGG - chr5_4:5965770-5965789 Msa0832810:five_prime_UTR 50.0%
GTGTACTTTCCCTTGCCATG+GGG + chr5_4:5965782-5965801 None:intergenic 50.0%
!! GTGATTGGGTTGATGGAAGC+AGG - chr5_4:5965828-5965847 Msa0832810:five_prime_UTR 50.0%
! AGCGGTTTTTCCCATGGCAA+GGG - chr5_4:5965977-5965996 Msa0832810:five_prime_UTR 50.0%
! CCCTCAAAACTTGCTCCTGA+TGG + chr5_4:5965464-5965483 None:intergenic 50.0%
ATGGATGCCGTGACCATGAA+AGG + chr5_4:5966125-5966144 None:intergenic 50.0%
!! TTCAATCCGGTGGCGGAACT+GGG - chr5_4:5963575-5963594 Msa0832810:CDS 55.0%
!!! TTTTAAGATGGGGGTGGCGG+TGG + chr5_4:5963616-5963635 None:intergenic 55.0%
GTTTGGCCGCTTGCTTTGGT+TGG + chr5_4:5963763-5963782 None:intergenic 55.0%
! GAGAAGGAGGAGATTGGTCG+TGG + chr5_4:5963826-5963845 None:intergenic 55.0%
! GAAGATGGAGGAGTATGCGG+CGG + chr5_4:5963858-5963877 None:intergenic 55.0%
! TACCAGGGTGACTGGGTTGA+TGG - chr5_4:5965407-5965426 Msa0832810:five_prime_UTR 55.0%
TTCCATCAACCCAGTCACCC+TGG + chr5_4:5965412-5965431 None:intergenic 55.0%
!! TAAGGGTGCCGTGACCATGA+CGG + chr5_4:5965505-5965524 None:intergenic 55.0%
ATCTCCGGGAATTCCCGTGA+TGG - chr5_4:5965695-5965714 Msa0832810:intron 55.0%
GTGACCATCACGGGAATTCC+CGG + chr5_4:5965702-5965721 None:intergenic 55.0%
GGGAATTCCCGTGATGGTCA+CGG - chr5_4:5965701-5965720 Msa0832810:intron 55.0%
AAGGATGCCGTGACCATCAC+GGG + chr5_4:5965711-5965730 None:intergenic 55.0%
GAGTGGTTTACCCCATGGCA+AGG - chr5_4:5965769-5965788 Msa0832810:five_prime_UTR 55.0%
! TTGTATGGGTGCCGTGACCA+TGG + chr5_4:5965922-5965941 None:intergenic 55.0%
! GAGCGGTTTTTCCCATGGCA+AGG - chr5_4:5965976-5965995 Msa0832810:five_prime_UTR 55.0%
!! CTTCAATCCGGTGGCGGAAC+TGG - chr5_4:5963574-5963593 Msa0832810:CDS 60.0%
!! TCAATCCGGTGGCGGAACTG+GGG - chr5_4:5963576-5963595 Msa0832810:CDS 60.0%
!! GCGGTGATGGATGGAGAAGG+AGG + chr5_4:5963839-5963858 None:intergenic 60.0%
!! GAGTATGCGGCGGTGATGGA+TGG + chr5_4:5963848-5963867 None:intergenic 60.0%
!! AAGGGTGCCGTGACCATGAC+GGG + chr5_4:5965504-5965523 None:intergenic 60.0%
!! TGGGTTGATGGAAGCAGGGC+AGG - chr5_4:5965833-5965852 Msa0832810:five_prime_UTR 60.0%
!! GGGTTGATGGAAGCAGGGCA+GGG - chr5_4:5965834-5965853 Msa0832810:five_prime_UTR 60.0%
GATGGAAGCAGGGCAGGGAA+TGG - chr5_4:5965839-5965858 Msa0832810:five_prime_UTR 60.0%
GAAGCAGGGCAGGGAATGGA+CGG - chr5_4:5965843-5965862 Msa0832810:five_prime_UTR 60.0%
! ATGGGTGCCGTGACCATGGA+AGG + chr5_4:5965918-5965937 None:intergenic 60.0%
!! CAATCCGGTGGCGGAACTGG+GGG - chr5_4:5963577-5963596 Msa0832810:CDS 65.0%
ATCCACCACCACACCAGCGC+CGG - chr5_4:5963788-5963807 Msa0832810:CDS 65.0%
!! GCGGCGGTGATGGATGGAGA+AGG + chr5_4:5963842-5963861 None:intergenic 65.0%
! GGAGGAGTATGCGGCGGTGA+TGG + chr5_4:5963852-5963871 None:intergenic 65.0%
TGAAGCAGCGGCGGAAGCAG+TGG + chr5_4:5964693-5964712 None:intergenic 65.0%
TGGCGGAACTGGGGGTGGCA+AGG - chr5_4:5963585-5963604 Msa0832810:CDS 70.0%
GGCGGAACTGGGGGTGGCAA+GGG - chr5_4:5963586-5963605 Msa0832810:CDS 70.0%
GCGGAACTGGGGGTGGCAAG+GGG - chr5_4:5963587-5963606 Msa0832810:CDS 70.0%
CGGAACTGGGGGTGGCAAGG+GGG - chr5_4:5963588-5963607 Msa0832810:CDS 70.0%
AGCAGCGGCGGAAGCAGTGG+CGG + chr5_4:5964690-5964709 None:intergenic 70.0%
!! TCCGGTGGCGGAACTGGGGG+TGG - chr5_4:5963580-5963599 Msa0832810:CDS 75.0%
GCCACCCCCAGTTCCGCCAC+CGG + chr5_4:5963584-5963603 None:intergenic 75.0%
!!! CGCCGGCGCTGGTGTGGTGG+TGG + chr5_4:5963793-5963812 None:intergenic 80.0%
!!! CCTCGCCGGCGCTGGTGTGG+TGG + chr5_4:5963796-5963815 None:intergenic 80.0%
!!! CCACCACACCAGCGCCGGCG+AGG - chr5_4:5963793-5963812 Msa0832810:CDS 80.0%
!!! CCACACCAGCGCCGGCGAGG+CGG - chr5_4:5963796-5963815 Msa0832810:CDS 80.0%
! GTCGTGGCTCGCCGCCTCGC+CGG + chr5_4:5963810-5963829 None:intergenic 80.0%
!!! CCGCCTCGCCGGCGCTGGTG+TGG + chr5_4:5963799-5963818 None:intergenic 85.0%
! GCTCGCCGCCTCGCCGGCGC+TGG + chr5_4:5963804-5963823 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 5963419 5966287 5963419 ID=Msa0832810;Name=Msa0832810
chr5_4 mRNA 5963419 5966287 5963419 ID=Msa0832810-mRNA-1;Parent=Msa0832810;Name=Msa0832810-mRNA-1;_AED=0.30;_eAED=0.30;_QI=1162|1|1|1|0.25|0.2|5|92|319
chr5_4 exon 5963419 5964402 5963419 ID=Msa0832810-mRNA-1:exon:2557;Parent=Msa0832810-mRNA-1
chr5_4 exon 5964482 5964616 5964482 ID=Msa0832810-mRNA-1:exon:2556;Parent=Msa0832810-mRNA-1
chr5_4 exon 5964783 5965442 5964783 ID=Msa0832810-mRNA-1:exon:2555;Parent=Msa0832810-mRNA-1
chr5_4 exon 5965718 5966015 5965718 ID=Msa0832810-mRNA-1:exon:2554;Parent=Msa0832810-mRNA-1
chr5_4 exon 5966151 5966287 5966151 ID=Msa0832810-mRNA-1:exon:2553;Parent=Msa0832810-mRNA-1
chr5_4 five_prime_UTR 5966151 5966287 5966151 ID=Msa0832810-mRNA-1:five_prime_utr;Parent=Msa0832810-mRNA-1
chr5_4 five_prime_UTR 5965718 5966015 5965718 ID=Msa0832810-mRNA-1:five_prime_utr;Parent=Msa0832810-mRNA-1
chr5_4 five_prime_UTR 5964783 5965442 5964783 ID=Msa0832810-mRNA-1:five_prime_utr;Parent=Msa0832810-mRNA-1
chr5_4 five_prime_UTR 5964550 5964616 5964550 ID=Msa0832810-mRNA-1:five_prime_utr;Parent=Msa0832810-mRNA-1
chr5_4 CDS 5964482 5964549 5964482 ID=Msa0832810-mRNA-1:cds;Parent=Msa0832810-mRNA-1
chr5_4 CDS 5963511 5964402 5963511 ID=Msa0832810-mRNA-1:cds;Parent=Msa0832810-mRNA-1
chr5_4 three_prime_UTR 5963419 5963510 5963419 ID=Msa0832810-mRNA-1:three_prime_utr;Parent=Msa0832810-mRNA-1
Gene Sequence

>Msa0832810

ATGTTTCCTCTGGCGTGGATTTTAGAATATCTTTACTTGTTTTACTTGTTCCTAATGGACAATGCAAGGTTTAAAGTGAAGCATTTTCCAAATGGCGATGTCTACATTGGTTTTGCCAAGGGAAAACGTATGCATGGCAAGGGAAGGTACACATGGTCAAATGGAACAATATACCAGGGTGACTGGGTTGATGGAAATAAGACAGGGAAAGGGCGGATGATATATCCATCAGGAGCAAGTTTTGAGGGTGGATTCTTTAGGAATTCCCGTCATGGTCACGGCACCCTTACAAAATCCAATGGGGATGTCTACATTGGTAACTTCGAGAATGATCTTTTCCACGGCAAGGGAAAGTACACATGGTCAGATGGAGAAATATACGAGGGTGATTGGGTTGATGGAAGTAGGACAGGGAAAGGACGGATCATATTTCCATCAGGAACAACTTTTGAGGGTGAAATCTCCGGGAATTCCCGTGATGGTCACGGCATCCTTACAAAATCCAACGGGGATATCTACATTGGTAACTTCAAGAGTGGTTTACCCCATGGCAAGGGAAAGTACACATGGTCAAATGGAACAATATATGAAGGTGATTGGGTTGATGGAAGCAGGGCAGGGAATGGACGGATCATATATCCATCAGGAACAACTTTTGAGGGTGAATTCTCTATGAATTCCTTCCATGGTCACGGCACCCATACAAATTCAAACGGGGATGTCTACATTGGTAACTTCAAGAGCGGTTTTTCCCATGGCAAGGGAAAGTTCACATGGTCAGATGGAACAATATATGAGGGTGATTGGGTTGATGGTAAAAGGAAAGGGAAAGGAAGAATCATATATCCATCAGGAGCAAGTTTTGAGGGCGAATTCTCTGGGAATTCCTTTCATGGTCACGGCATCCATACAAATTCAAATGGGGAAGTCTACATTGGTAAATTCAAGAGCGGTGTTTAA
Protein sequence

>Msa0832810

MFPLAWILEYLYLFYLFLMDNARFKVKHFPNGDVYIGFAKGKRMHGKGRYTWSNGTIYQGDWVDGNKTGKGRMIYPSGASFEGGFFRNSRHGHGTLTKSNGDVYIGNFENDLFHGKGKYTWSDGEIYEGDWVDGSRTGKGRIIFPSGTTFEGEISGNSRDGHGILTKSNGDIYIGNFKSGLPHGKGKYTWSNGTIYEGDWVDGSRAGNGRIIYPSGTTFEGEFSMNSFHGHGTHTNSNGDVYIGNFKSGFSHGKGKFTWSDGTIYEGDWVDGKRKGKGRIIYPSGASFEGEFSGNSFHGHGIHTNSNGEVYIGKFKSGV*