AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0795650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795650 MtrunA17_Chr2g0316611 72.990 311 80 1 11 317 13 323 4.80e-159 449
Msa0795650 MtrunA17_Chr2g0316611 75.836 269 65 0 30 298 105 373 2.05e-141 404
Msa0795650 MtrunA17_Chr2g0316611 68.421 152 48 0 168 319 36 187 3.49e-62 202
Msa0795650 MtrunA17_Chr2g0316631 71.918 292 78 1 11 298 13 304 4.02e-146 413
Msa0795650 MtrunA17_Chr2g0316631 68.778 221 69 0 99 319 36 256 8.70e-99 293
Msa0795650 MtrunA17_Chr6g0467061 67.961 309 98 1 11 319 1 308 2.23e-144 410
Msa0795650 MtrunA17_Chr6g0467061 69.355 248 76 0 30 277 88 335 8.48e-116 337
Msa0795650 MtrunA17_Chr6g0467061 61.881 202 54 1 29 207 133 334 7.66e-74 230
Msa0795650 MtrunA17_Chr8g0377671 44.318 264 147 0 18 281 8 271 4.88e-68 214
Msa0795650 MtrunA17_Chr8g0377671 40.183 219 131 0 99 317 20 238 9.35e-48 162
Msa0795650 MtrunA17_Chr8g0377671 41.379 174 79 1 168 318 20 193 2.21e-34 127
Msa0795650 MtrunA17_Chr8g0382971 42.403 283 157 1 1 283 2 278 1.55e-62 202
Msa0795650 MtrunA17_Chr8g0382971 38.258 264 138 2 73 313 1 262 1.04e-47 164
Msa0795650 MtrunA17_Chr8g0382971 42.286 175 78 1 165 316 22 196 2.50e-34 128
Msa0795650 MtrunA17_Chr5g0398011 71.324 136 39 0 10 145 15 150 1.54e-60 190
Msa0795650 MtrunA17_Chr5g0398011 71.429 119 34 0 96 214 32 150 2.98e-52 169
Msa0795650 MtrunA17_Chr5g0398011 69.748 119 36 0 165 283 32 150 9.63e-51 165
Msa0795650 MtrunA17_Chr5g0398011 67.470 83 27 0 237 319 35 117 1.20e-28 107
Msa0795650 MtrunA17_Chr8g0377221 46.847 222 106 3 99 318 5 216 4.33e-53 175
Msa0795650 MtrunA17_Chr8g0377221 46.445 211 98 2 29 224 4 214 1.73e-52 174
Msa0795650 MtrunA17_Chr8g0377221 54.248 153 69 1 168 319 5 157 2.09e-45 155
Msa0795650 MtrunA17_Chr8g0377221 40.000 150 75 2 26 160 70 219 5.01e-24 99.0
Msa0795650 MtrunA17_Chr8g0385241 36.391 327 172 3 24 315 4 329 7.22e-52 176
Msa0795650 MtrunA17_Chr8g0385241 33.113 302 122 4 96 317 7 308 3.06e-37 137
Msa0795650 MtrunA17_Chr8g0385241 33.704 270 143 5 26 283 98 343 8.73e-33 125
Msa0795650 MtrunA17_Chr8g0385241 32.773 238 136 1 1 214 106 343 2.10e-27 110
Msa0795650 MtrunA17_Chr4g0059911 41.772 237 137 1 32 267 11 247 1.28e-49 169
Msa0795650 MtrunA17_Chr4g0059911 42.273 220 126 1 99 317 9 228 4.26e-47 162
Msa0795650 MtrunA17_Chr4g0059911 42.763 152 63 2 168 318 9 137 3.54e-27 109
Msa0795650 MtrunA17_Chr4g0059911 58.537 82 33 1 236 316 8 89 1.88e-21 93.6
Msa0795650 MtrunA17_Chr4g0059911 37.255 102 64 0 28 129 146 247 1.48e-11 64.7
Msa0795650 MtrunA17_Chr5g0398021 64.286 126 45 0 88 213 2 127 2.05e-49 162
Msa0795650 MtrunA17_Chr5g0398021 60.317 126 50 0 157 282 2 127 1.89e-43 146
Msa0795650 MtrunA17_Chr5g0398021 64.078 103 37 0 31 133 14 116 1.12e-39 137
Msa0795650 MtrunA17_Chr5g0398021 58.947 95 39 0 225 319 1 95 9.25e-32 116
Msa0795650 MtrunA17_Chr8g0380791 47.000 200 105 1 18 217 1 199 3.45e-46 166
Msa0795650 MtrunA17_Chr8g0380791 47.340 188 98 1 99 286 13 199 1.04e-43 159
Msa0795650 MtrunA17_Chr8g0380791 44.571 175 74 1 168 319 13 187 1.03e-36 139
Msa0795650 MtrunA17_Chr8g0380791 43.564 101 34 1 213 313 12 89 8.65e-16 78.2
Msa0795650 MtrunA17_Chr8g0377191 37.450 251 111 2 19 269 1 205 2.37e-44 150
Msa0795650 MtrunA17_Chr8g0377191 39.896 193 116 0 100 292 13 205 2.78e-38 134
Msa0795650 MtrunA17_Chr8g0377191 40.462 173 80 1 169 318 13 185 7.43e-32 118
Msa0795650 MtrunA17_Chr1g0171491 40.201 199 118 1 93 291 55 252 1.51e-34 133
Msa0795650 MtrunA17_Chr1g0171491 40.107 187 111 1 29 215 60 245 7.83e-31 122
Msa0795650 MtrunA17_Chr1g0171491 37.870 169 105 0 151 319 44 212 1.51e-26 110
Msa0795650 MtrunA17_Chr1g0171491 32.086 187 127 0 127 313 43 229 4.22e-22 97.1
Msa0795650 MtrunA17_Chr1g0171491 32.258 124 84 0 196 319 43 166 4.82e-13 69.7
Msa0795650 MtrunA17_Chr8g0377211 39.487 195 71 3 18 212 8 155 7.45e-34 122
Msa0795650 MtrunA17_Chr8g0377211 45.255 137 51 2 168 281 20 155 3.35e-27 104
Msa0795650 MtrunA17_Chr3g0082501 40.000 195 116 1 93 287 58 251 1.31e-33 130
Msa0795650 MtrunA17_Chr3g0082501 38.021 192 118 1 27 218 61 251 1.32e-31 124
Msa0795650 MtrunA17_Chr3g0082501 38.217 157 97 0 162 318 58 214 3.96e-26 108
Msa0795650 MtrunA17_Chr8g0353121 40.323 186 110 1 100 285 54 238 1.23e-32 127
Msa0795650 MtrunA17_Chr8g0353121 38.889 198 119 2 20 216 42 238 3.56e-31 123
Msa0795650 MtrunA17_Chr8g0353121 37.333 150 94 0 169 318 54 203 1.55e-23 101
Msa0795650 MtrunA17_Chr8g0353121 31.579 171 117 0 143 313 51 221 1.35e-17 83.6
Msa0795650 MtrunA17_Chr8g0353121 31.383 188 118 2 29 215 98 275 1.55e-15 77.4
Msa0795650 MtrunA17_Chr8g0353121 33.594 128 85 0 192 319 54 181 1.40e-12 68.6
Msa0795650 MtrunA17_Chr3g0131001 40.230 174 104 0 27 200 52 225 9.17e-32 125
Msa0795650 MtrunA17_Chr3g0131001 36.364 198 118 1 100 289 56 253 1.10e-27 113
Msa0795650 MtrunA17_Chr3g0131001 38.411 151 93 0 169 319 56 206 9.10e-23 99.0
Msa0795650 MtrunA17_Chr3g0131001 34.132 167 110 0 144 310 54 220 1.43e-18 86.3
Msa0795650 MtrunA17_Chr3g0115111 35.391 243 125 5 72 313 34 245 1.10e-31 125
Msa0795650 MtrunA17_Chr3g0115111 36.058 208 109 2 23 229 50 234 2.96e-31 124
Msa0795650 MtrunA17_Chr3g0115111 38.889 180 105 2 141 319 34 209 2.05e-28 115
Msa0795650 MtrunA17_Chr1g0180261 36.364 209 130 2 96 302 48 255 2.55e-31 124
Msa0795650 MtrunA17_Chr1g0180261 33.054 239 154 4 23 257 44 280 6.85e-31 122
Msa0795650 MtrunA17_Chr1g0180261 35.955 178 91 1 165 319 48 225 1.42e-25 107
Msa0795650 MtrunA17_Chr8g0385201 36.126 191 120 2 17 206 17 206 2.65e-28 115
Msa0795650 MtrunA17_Chr8g0385201 36.667 210 125 4 85 289 18 224 8.16e-27 110
Msa0795650 MtrunA17_Chr8g0385201 37.419 155 96 1 166 319 28 182 6.42e-23 99.4
Msa0795650 MtrunA17_Chr8g0385201 35.185 162 104 1 144 304 29 190 8.67e-22 95.9
Msa0795650 MtrunA17_Chr7g0256301 38.462 195 97 1 99 293 71 242 3.17e-27 112
Msa0795650 MtrunA17_Chr7g0256301 38.012 171 83 1 168 315 71 241 4.00e-26 108
Msa0795650 MtrunA17_Chr7g0256301 37.879 198 100 2 27 224 68 242 1.24e-25 107
Msa0795650 MtrunA17_Chr8g0383551 31.698 265 106 6 92 281 17 281 9.86e-27 108
Msa0795650 MtrunA17_Chr8g0383551 28.626 262 138 7 11 223 8 269 5.40e-20 89.4
Msa0795650 MtrunA17_Chr8g0383551 27.350 234 95 6 161 319 17 250 4.95e-14 72.0
Msa0795650 MtrunA17_Chr8g0383551 32.258 155 74 3 26 149 138 292 7.75e-12 65.5
Msa0795650 MtrunA17_Chr8g0383331 35.326 184 91 2 29 212 3 158 2.10e-26 102
Msa0795650 MtrunA17_Chr8g0383331 39.189 148 90 0 120 267 2 149 1.14e-24 97.8
Msa0795650 MtrunA17_Chr8g0383331 32.468 154 104 0 73 226 1 154 3.60e-20 85.9
Msa0795650 MtrunA17_Chr8g0383331 33.987 153 101 0 165 317 1 153 1.24e-19 84.3
Msa0795650 MtrunA17_Chr8g0383331 35.294 119 77 0 26 144 46 164 1.43e-15 73.2
Msa0795650 MtrunA17_Chr5g0424301 36.313 179 91 1 100 278 70 225 2.49e-26 109
Msa0795650 MtrunA17_Chr5g0424301 34.426 183 97 1 27 209 66 225 1.03e-25 107
Msa0795650 MtrunA17_Chr5g0424301 35.326 184 110 2 138 319 44 220 2.28e-25 106
Msa0795650 MtrunA17_Chr5g0424301 33.133 166 111 0 143 308 67 232 8.25e-21 93.2
Msa0795650 MtrunA17_Chr5g0424301 30.000 140 98 0 31 170 93 232 4.12e-14 73.2
Msa0795650 MtrunA17_Chr7g0233351 33.508 191 104 1 100 290 193 360 1.03e-20 92.0
Msa0795650 MtrunA17_Chr7g0233351 37.989 179 109 2 26 203 188 365 1.10e-20 92.0
Msa0795650 MtrunA17_Chr7g0233351 36.000 150 96 0 169 318 193 342 2.59e-18 85.1
Msa0795650 MtrunA17_Chr7g0233351 26.941 219 114 2 54 272 193 365 8.18e-14 71.6
Msa0795650 MtrunA17_Chr4g0055371 33.929 168 111 0 120 287 170 337 1.73e-20 91.3
Msa0795650 MtrunA17_Chr4g0055371 36.313 179 112 2 26 203 168 345 7.58e-19 86.7
Msa0795650 MtrunA17_Chr4g0055371 32.620 187 124 1 132 318 138 322 8.16e-18 83.6
Msa0795650 MtrunA17_Chr4g0055371 33.333 168 112 0 51 218 170 337 1.69e-17 82.8
Msa0795650 MtrunA17_Chr4g0055371 37.008 127 78 2 24 149 212 337 3.55e-12 66.6
Msa0795650 MtrunA17_Chr5g0424111 34.715 193 103 1 99 291 197 366 3.41e-20 90.5
Msa0795650 MtrunA17_Chr5g0424111 35.196 179 116 0 25 203 192 370 2.47e-19 88.2
Msa0795650 MtrunA17_Chr5g0424111 34.524 168 110 0 151 318 180 347 5.23e-18 84.3
Msa0795650 MtrunA17_Chr8g0336161 34.615 182 119 0 22 203 189 370 5.92e-20 90.1
Msa0795650 MtrunA17_Chr8g0336161 33.908 174 115 0 99 272 197 370 7.72e-20 89.7
Msa0795650 MtrunA17_Chr8g0336161 32.203 177 120 0 143 319 195 371 7.48e-18 84.0
Msa0795650 MtrunA17_Chr8g0336161 30.682 176 122 0 74 249 195 370 6.27e-14 72.0
Msa0795650 MtrunA17_Chr3g0114791 32.338 201 112 2 99 298 185 362 4.56e-18 84.3
Msa0795650 MtrunA17_Chr3g0114791 35.032 157 102 0 162 318 179 335 2.68e-17 82.0
Msa0795650 MtrunA17_Chr3g0114791 35.233 193 119 3 26 217 181 368 3.59e-17 81.6
Msa0795650 MtrunA17_Chr3g0114791 29.947 187 131 0 63 249 172 358 2.49e-14 73.2
Msa0795650 MtrunA17_Chr8g0377201 55.556 72 31 1 144 215 3 73 9.97e-18 77.0
Msa0795650 MtrunA17_Chr8g0377201 52.703 74 34 1 73 146 1 73 1.14e-17 76.6
Msa0795650 MtrunA17_Chr8g0377201 54.167 72 32 1 213 284 3 73 8.31e-17 74.3
Msa0795650 MtrunA17_Chr8g0377201 59.615 52 20 1 26 77 23 73 1.53e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795650 AT1G60890.2 37.931 203 122 2 29 231 22 220 1.32e-34 134
Msa0795650 AT1G60890.2 38.830 188 114 1 99 286 23 209 7.37e-34 131
Msa0795650 AT1G60890.2 38.816 152 93 0 168 319 23 174 1.16e-27 113
Msa0795650 AT1G60890.2 31.771 192 130 1 128 319 7 197 2.97e-21 94.7
Msa0795650 AT1G60890.1 36.967 211 129 2 21 231 2 208 1.62e-34 133
Msa0795650 AT1G60890.1 38.830 188 114 1 99 286 11 197 9.39e-34 131
Msa0795650 AT1G60890.1 38.816 152 93 0 168 319 11 162 1.43e-27 113
Msa0795650 AT1G60890.1 32.240 183 124 0 137 319 3 185 4.16e-21 94.4
Msa0795650 AT1G10900.2 38.743 191 116 1 27 217 8 197 6.51e-34 132
Msa0795650 AT1G10900.2 37.968 187 115 1 100 286 12 197 1.90e-31 124
Msa0795650 AT1G10900.2 35.632 174 89 1 169 319 12 185 1.10e-24 105
Msa0795650 AT1G10900.1 38.743 191 116 1 27 217 8 197 6.51e-34 132
Msa0795650 AT1G10900.1 37.968 187 115 1 100 286 12 197 1.90e-31 124
Msa0795650 AT1G10900.1 35.632 174 89 1 169 319 12 185 1.10e-24 105
Msa0795650 AT1G10900.3 38.743 191 116 1 27 217 8 197 6.51e-34 132
Msa0795650 AT1G10900.3 37.968 187 115 1 100 286 12 197 1.90e-31 124
Msa0795650 AT1G10900.3 35.632 174 89 1 169 319 12 185 1.10e-24 105
Msa0795650 AT3G07960.2 38.462 195 119 1 93 287 21 214 3.82e-33 129
Msa0795650 AT3G07960.2 36.979 192 120 1 27 218 24 214 2.11e-31 124
Msa0795650 AT3G07960.2 36.076 158 101 0 162 319 21 178 4.45e-25 105
Msa0795650 AT3G07960.2 34.118 170 112 0 144 313 26 195 3.60e-23 100
Msa0795650 AT3G07960.4 38.462 195 119 1 93 287 21 214 3.82e-33 129
Msa0795650 AT3G07960.4 36.979 192 120 1 27 218 24 214 2.11e-31 124
Msa0795650 AT3G07960.4 36.076 158 101 0 162 319 21 178 4.45e-25 105
Msa0795650 AT3G07960.4 34.118 170 112 0 144 313 26 195 3.60e-23 100
Msa0795650 AT3G07960.3 38.462 195 119 1 93 287 21 214 4.66e-33 129
Msa0795650 AT3G07960.3 36.979 192 120 1 27 218 24 214 2.45e-31 124
Msa0795650 AT3G07960.3 36.076 158 101 0 162 319 21 178 4.66e-25 105
Msa0795650 AT3G07960.3 34.118 170 112 0 144 313 26 195 3.85e-23 100
Msa0795650 AT1G21980.1 40.230 174 104 0 27 200 73 246 4.88e-33 129
Msa0795650 AT1G21980.1 41.176 170 100 0 100 269 77 246 6.23e-32 126
Msa0795650 AT1G21980.1 40.397 151 90 0 169 319 77 227 2.01e-29 119
Msa0795650 AT1G21980.1 33.529 170 113 0 144 313 75 244 6.19e-22 97.1
Msa0795650 AT3G07960.1 38.462 195 119 1 93 287 21 214 1.48e-32 127
Msa0795650 AT3G07960.1 36.979 192 120 1 27 218 24 214 7.05e-31 123
Msa0795650 AT3G07960.1 36.076 158 101 0 162 319 21 178 9.88e-25 105
Msa0795650 AT3G07960.1 34.118 170 112 0 144 313 26 195 9.03e-23 99.4
Msa0795650 AT3G09920.3 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0795650 AT3G09920.3 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0795650 AT3G09920.3 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0795650 AT3G09920.4 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0795650 AT3G09920.4 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0795650 AT3G09920.4 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0795650 AT3G09920.2 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0795650 AT3G09920.2 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0795650 AT3G09920.2 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0795650 AT3G09920.1 31.164 292 179 6 20 301 41 320 4.39e-32 126
Msa0795650 AT3G09920.1 34.101 217 140 2 88 302 42 257 3.27e-28 115
Msa0795650 AT3G09920.1 32.653 196 130 1 124 319 34 227 1.59e-25 107
Msa0795650 AT3G56960.2 37.306 193 120 1 93 285 66 257 6.10e-31 123
Msa0795650 AT3G56960.2 35.106 188 121 1 29 216 71 257 2.03e-26 110
Msa0795650 AT3G56960.2 34.857 175 91 1 162 313 66 240 9.20e-25 105
Msa0795650 AT3G56960.2 38.393 112 46 2 231 319 66 177 3.39e-15 76.6
Msa0795650 AT3G56960.1 37.306 193 120 1 93 285 66 257 6.10e-31 123
Msa0795650 AT3G56960.1 35.106 188 121 1 29 216 71 257 2.03e-26 110
Msa0795650 AT3G56960.1 34.857 175 91 1 162 313 66 240 9.20e-25 105
Msa0795650 AT3G56960.1 38.393 112 46 2 231 319 66 177 3.39e-15 76.6
Msa0795650 AT1G77740.2 36.517 178 113 0 27 204 74 251 1.20e-29 119
Msa0795650 AT1G77740.2 37.647 170 106 0 100 269 78 247 2.91e-28 115
Msa0795650 AT1G77740.2 37.748 151 94 0 169 319 78 228 2.56e-26 109
Msa0795650 AT1G77740.2 32.941 170 114 0 144 313 76 245 4.18e-22 97.4
Msa0795650 AT1G77740.1 36.517 178 113 0 27 204 74 251 1.20e-29 119
Msa0795650 AT1G77740.1 37.647 170 106 0 100 269 78 247 2.91e-28 115
Msa0795650 AT1G77740.1 37.748 151 94 0 169 319 78 228 2.56e-26 109
Msa0795650 AT1G77740.1 32.941 170 114 0 144 313 76 245 4.18e-22 97.4
Msa0795650 AT2G41210.1 37.306 193 120 1 93 285 64 255 1.66e-29 119
Msa0795650 AT2G41210.1 37.234 188 117 1 29 216 69 255 1.53e-27 113
Msa0795650 AT2G41210.1 36.571 175 88 1 162 313 64 238 7.38e-27 111
Msa0795650 AT2G41210.1 32.065 184 125 0 54 237 71 254 1.52e-17 84.0
Msa0795650 AT2G41210.1 36.134 119 52 3 224 319 58 175 1.20e-14 75.1
Msa0795650 AT2G26420.1 38.122 181 89 1 100 280 54 211 1.09e-27 113
Msa0795650 AT2G26420.1 35.196 179 114 1 141 319 28 204 3.30e-26 109
Msa0795650 AT2G26420.1 35.602 191 121 2 23 212 46 235 7.53e-24 102
Msa0795650 AT2G26420.2 38.122 181 89 1 100 280 54 211 1.20e-27 113
Msa0795650 AT2G26420.2 35.196 179 114 1 141 319 28 204 4.22e-26 108
Msa0795650 AT2G26420.2 35.602 191 121 2 23 212 46 235 9.54e-24 102
Msa0795650 AT2G26420.3 38.122 181 89 1 100 280 54 211 1.20e-27 113
Msa0795650 AT2G26420.3 35.196 179 114 1 141 319 28 204 4.22e-26 108
Msa0795650 AT2G26420.3 35.602 191 121 2 23 212 46 235 9.54e-24 102
Msa0795650 AT4G17080.1 33.333 192 105 1 99 290 257 425 1.05e-19 89.7
Msa0795650 AT4G17080.1 36.872 179 111 2 26 203 253 430 8.97e-19 87.0
Msa0795650 AT4G17080.1 35.099 151 98 0 168 318 257 407 1.09e-16 80.9
Msa0795650 AT4G17080.1 27.341 267 163 3 14 272 187 430 2.02e-15 77.0
Msa0795650 AT2G35170.1 34.337 166 109 0 125 290 229 394 1.38e-19 89.4
Msa0795650 AT2G35170.1 33.846 195 127 2 26 219 222 415 1.19e-18 86.7
Msa0795650 AT2G35170.1 30.435 184 127 1 135 318 194 376 2.94e-17 82.4
Msa0795650 AT2G35170.1 33.333 165 110 0 57 221 230 394 1.95e-15 77.0
Msa0795650 AT2G35170.1 28.014 282 192 4 1 277 155 430 3.56e-15 76.3
Msa0795650 AT2G35170.1 32.353 170 115 0 150 319 231 400 1.70e-13 71.2
Msa0795650 AT1G21920.2 32.642 193 107 1 99 291 174 343 3.49e-18 84.7
Msa0795650 AT1G21920.2 35.032 157 102 0 162 318 168 324 2.85e-17 82.0
Msa0795650 AT1G21920.2 35.196 179 114 2 26 203 170 347 1.17e-16 80.1
Msa0795650 AT1G21920.2 32.044 181 123 0 42 222 163 343 2.93e-15 76.3
Msa0795650 AT1G77660.1 32.653 196 132 0 105 300 161 356 6.89e-18 84.3
Msa0795650 AT1G77660.1 34.444 180 116 2 26 204 174 352 1.79e-15 77.0
Msa0795650 AT1G77660.1 33.758 157 104 0 162 318 172 328 5.68e-15 75.5
Msa0795650 AT1G77660.1 30.952 210 136 2 22 222 138 347 6.51e-14 72.4
Msa0795650 AT1G21920.1 32.642 193 107 1 99 291 174 343 7.64e-18 84.0
Msa0795650 AT1G21920.1 35.032 157 102 0 162 318 168 324 7.44e-17 81.3
Msa0795650 AT1G21920.1 35.196 179 114 2 26 203 170 347 3.53e-16 79.0
Msa0795650 AT1G21920.1 32.044 181 123 0 42 222 163 343 1.01e-14 74.7

Find 207 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCACATTAACTTACAATT+AGG 0.180527 5_3:+7616590 None:intergenic
GTCACTCTCCTTTCTGCAAT+TGG 0.259690 5_3:+7615723 None:intergenic
GTCACTCTCCTTTCTGCAAT+TGG 0.259690 5_3:+7617104 None:intergenic
GAATGAAAGGCGAGCGCATT+AGG 0.268089 5_3:+7617204 None:intergenic
TTCACATTAACTTACAATTA+GGG 0.283635 5_3:+7616591 None:intergenic
ATTCAAGAGCGGTGTTTAAA+TGG 0.283979 5_3:-7614335 Msa0795650:exon
TACGAGGGTGATTGGGTTGA+TGG 0.301936 5_3:-7614898 Msa0795650:CDS
ATTACCTTGCATTGTCCATT+AGG 0.309389 5_3:+7615305 None:intergenic
GCTCGCCGCCTCGCCGGCGC+TGG 0.312747 5_3:+7616711 None:intergenic
CATCCCCGTTTGAATTTGTA+TGG 0.317731 5_3:+7614578 None:intergenic
AGTCCAGGCGGATCTGGTTT+TGG 0.319336 5_3:+7617237 None:intergenic
GAGAAATATACGAGGGTGAT+TGG 0.320107 5_3:-7614906 Msa0795650:CDS
CTTCCCCATTTGAATTTGTA+TGG 0.323270 5_3:+7614371 None:intergenic
GTGATTGGGTTGATGGTAAA+AGG 0.336593 5_3:-7614477 Msa0795650:CDS
CATGCACGATGATGGTGTTC+AGG 0.339155 5_3:+7617153 None:intergenic
TTCTCTGGGAATTCCTTTCA+TGG 0.346086 5_3:-7614403 Msa0795650:CDS
GAACAATATATGAGGGTGAT+TGG 0.359146 5_3:-7614492 Msa0795650:CDS
GAACAATATATGAAGGTGAT+TGG 0.373787 5_3:-7614699 Msa0795650:CDS
AGTTGTGTCTTTGTTTGTAC+TGG 0.383860 5_3:+7615415 None:intergenic
TAATGTTTGGCCGCTTGCTT+TGG 0.387154 5_3:+7616748 None:intergenic
TATGAAGGTGATTGGGTTGA+TGG 0.396586 5_3:-7614691 Msa0795650:CDS
TGGGTTGATGGAAGCAGGGC+AGG 0.399450 5_3:-7614679 Msa0795650:CDS
TACCAGGGTGACTGGGTTGA+TGG 0.406579 5_3:-7615105 Msa0795650:CDS
GAACAATATACCAGGGTGAC+TGG 0.408003 5_3:-7615113 Msa0795650:CDS
TTGATGTAATTAGATGTGTT+AGG 0.408295 5_3:-7616081 Msa0795650:five_prime_UTR
GTGACCATCACGGGAATTCC+CGG 0.408677 5_3:+7614813 None:intergenic
ACTGATCTAGCATATATTCA+TGG 0.415521 5_3:-7614245 None:intergenic
GGCATCCATACAAATTCAAA+TGG 0.416878 5_3:-7614376 Msa0795650:CDS
TATGAGGGTGATTGGGTTGA+TGG 0.422414 5_3:-7614484 Msa0795650:CDS
CAACAGAGACTGAGTGTGAT+AGG 0.434059 5_3:+7616981 None:intergenic
CCAATGTAGACATCGCCATT+TGG 0.439353 5_3:+7615189 None:intergenic
CGCCGGCGCTGGTGTGGTGG+TGG 0.441445 5_3:+7616722 None:intergenic
ATGTGTACTTTCCCTTGCCA+TGG 0.441937 5_3:+7614731 None:intergenic
GTCAGATGGAACAATATATG+AGG 0.442982 5_3:-7614500 Msa0795650:CDS
GTTTGGCCGCTTGCTTTGGT+TGG 0.443176 5_3:+7616752 None:intergenic
TGGGTTGATGGAAGTAGGAC+AGG 0.444196 5_3:-7614886 Msa0795650:CDS
GTCGTGGCTCGCCGCCTCGC+CGG 0.446652 5_3:+7616705 None:intergenic
CCCTCAAAAGTTGTTCCTGA+TGG 0.450586 5_3:+7614637 None:intergenic
AATTGGAGCGATTCCGATGT+TGG 0.451150 5_3:+7617121 None:intergenic
GTGATTGGGTTGATGGAAGC+AGG 0.451169 5_3:-7614684 Msa0795650:CDS
CCCTCAAAAGTTGTTCCTGA+TGG 0.451183 5_3:+7614844 None:intergenic
TCGCCTTTCATTCACGTTGA+GGG 0.451373 5_3:-7617194 Msa0795650:five_prime_UTR
AATGAAAGGCGAGCGCATTA+GGG 0.452121 5_3:+7617205 None:intergenic
GAAGAATAGAGATCGCGTTA+AGG 0.453536 5_3:+7616777 None:intergenic
CCGCCTCGCCGGCGCTGGTG+TGG 0.454989 5_3:+7616716 None:intergenic
CCCTCAAAACTTGCTCCTGA+TGG 0.455757 5_3:+7614430 None:intergenic
GCATCCTTACAAAATCCAAC+GGG 0.457759 5_3:-7614789 Msa0795650:CDS
ATTGGAGCGATTCCGATGTT+GGG 0.459913 5_3:+7617122 None:intergenic
AGAAATATACGAGGGTGATT+GGG 0.463175 5_3:-7614905 Msa0795650:CDS
TTGCAGAATTTCTGATTGAA+AGG 0.464287 5_3:-7616827 Msa0795650:intron
AAGAATAGAGATCGCGTTAA+GGG 0.464835 5_3:+7616778 None:intergenic
TGTGTACTTTCCCTTGCCAT+GGG 0.466145 5_3:+7614732 None:intergenic
CAAATCAGAATCATAATTGA+AGG 0.467302 5_3:+7616554 None:intergenic
GGAAAGTACACATGGTCAAA+TGG 0.467614 5_3:-7614721 Msa0795650:CDS
GCACCCTTACAAAATCCAAT+GGG 0.467821 5_3:-7614996 Msa0795650:CDS
CCCTCAAAACTTGCTCCTGA+TGG 0.474150 5_3:+7615051 None:intergenic
GGAAGGTACACATGGTCAAA+TGG 0.475967 5_3:-7615135 Msa0795650:CDS
GATAGCAGTCCAGGCGGATC+TGG 0.476403 5_3:+7617231 None:intergenic
CTATCACACTCAGTCTCTGT+TGG 0.478474 5_3:-7616980 Msa0795650:five_prime_UTR
TTTGGCCGCTTGCTTTGGTT+GGG 0.479379 5_3:+7616753 None:intergenic
GGCACCCATACAAATTCAAA+CGG 0.480555 5_3:-7614583 Msa0795650:CDS
ACAATGAAACAAAGATGTGT+TGG 0.481474 5_3:-7616219 Msa0795650:five_prime_UTR
AAGGGTGCCGTGACCATGAC+GGG 0.483261 5_3:+7615011 None:intergenic
ACACCATCATCGTGCATGTC+CGG 0.485329 5_3:-7617148 Msa0795650:five_prime_UTR
CAATGAAACAAAGATGTGTT+GGG 0.489810 5_3:-7616218 Msa0795650:five_prime_UTR
GGAAGAATCATATATCCATC+AGG 0.493374 5_3:-7614445 Msa0795650:CDS
GCATCCATACAAATTCAAAT+GGG 0.493721 5_3:-7614375 Msa0795650:CDS
AGCAGCGGCGGAAGCAGTGG+CGG 0.495012 5_3:+7615825 None:intergenic
AAGTGATCAAATGTTTCCTC+TGG 0.495346 5_3:-7615365 Msa0795650:exon
TTAGGGTGTGATAGCAGTCC+AGG 0.497749 5_3:+7617222 None:intergenic
CAGATCTCAAATTGCACAGC+GGG 0.498602 5_3:-7615649 Msa0795650:five_prime_UTR
CTCGCCTTTCATTCACGTTG+AGG 0.500354 5_3:-7617195 Msa0795650:five_prime_UTR
AAAGCGTACAGTGCATCTAT+AGG 0.500435 5_3:-7615997 Msa0795650:five_prime_UTR
GGGAATTCCTTTCATGGTCA+CGG 0.501081 5_3:-7614397 Msa0795650:CDS
TGGATGGAGAAGGAGGAGAT+TGG 0.501367 5_3:+7616683 None:intergenic
AAGGATGCCGTGACCATCAC+GGG 0.506087 5_3:+7614804 None:intergenic
CCTCGCCGGCGCTGGTGTGG+TGG 0.506763 5_3:+7616719 None:intergenic
GCACCCATACAAATTCAAAC+GGG 0.510990 5_3:-7614582 Msa0795650:CDS
CCAAATGGCGATGTCTACAT+TGG 0.511980 5_3:-7615189 Msa0795650:CDS
GGACGGATCATATATCCATC+AGG 0.513489 5_3:-7614652 Msa0795650:CDS
GAGTATGCGGCGGTGATGGA+TGG 0.513897 5_3:+7616667 None:intergenic
TTTCATTGTTCTACTGTCAC+AGG 0.513905 5_3:+7616142 None:intergenic
TGGGTTGATGGAAATAAGAC+AGG 0.514081 5_3:-7615093 Msa0795650:CDS
ATGTGAACTTTCCCTTGCCA+TGG 0.514104 5_3:+7614524 None:intergenic
AACAATATATGAAGGTGATT+GGG 0.516259 5_3:-7614698 Msa0795650:CDS
GGACGGATCATATTTCCATC+AGG 0.517140 5_3:-7614859 Msa0795650:CDS
CAGAATTTCTGATTGAAAGG+AGG 0.517444 5_3:-7616824 Msa0795650:five_prime_UTR
GGAGGAGTATGCGGCGGTGA+TGG 0.518932 5_3:+7616663 None:intergenic
GTGGTGGTGGATGTAATGTT+TGG 0.520296 5_3:+7616735 None:intergenic
GATGGAAGCAGGGCAGGGAA+TGG 0.522101 5_3:-7614673 Msa0795650:CDS
ATGATGGTGTTCAGGGAAGC+GGG 0.523818 5_3:+7617161 None:intergenic
AACAATATATGAGGGTGATT+GGG 0.524240 5_3:-7614491 Msa0795650:CDS
CGATTCCGATGTTGGGTCAC+CGG 0.525962 5_3:+7617129 None:intergenic
ATTATGTAAAATATTATCAC+AGG 0.527974 5_3:+7616178 None:intergenic
TGAAGAATCGAAACAGAAGA+TGG 0.529600 5_3:+7616642 None:intergenic
TATCACACTCAGTCTCTGTT+GGG 0.531787 5_3:-7616979 Msa0795650:intron
GATGATGGTGTTCAGGGAAG+CGG 0.533019 5_3:+7617160 None:intergenic
ATGCACGATGATGGTGTTCA+GGG 0.534140 5_3:+7617154 None:intergenic
AATTAACAAAATATTATCAC+AGG 0.534874 5_3:+7616041 None:intergenic
ATCAAATGTTTCCTCTGGCG+TGG 0.536997 5_3:-7615360 Msa0795650:exon
TGAAGCAGCGGCGGAAGCAG+TGG 0.537035 5_3:+7615822 None:intergenic
GAATAATAAGCAGAAAGGAA+TGG 0.539488 5_3:-7616261 Msa0795650:intron
TGGGTTGATGGTAAAAGGAA+AGG 0.541242 5_3:-7614472 Msa0795650:CDS
TTCTCTATGAATTCCTTCCA+TGG 0.541513 5_3:-7614610 Msa0795650:CDS
CACATCTCAAATTACACAGC+GGG 0.541810 5_3:-7617025 Msa0795650:five_prime_UTR
AAACCAAAACCAGATCCGCC+TGG 0.546188 5_3:-7617240 Msa0795650:five_prime_UTR
GATGGAAATAAGACAGGGAA+AGG 0.547349 5_3:-7615087 Msa0795650:CDS
AGGAATTCCCGTCATGGTCA+CGG 0.548090 5_3:-7615018 Msa0795650:CDS
TTGGAGCGATTCCGATGTTG+AGG 0.548124 5_3:+7615742 None:intergenic
GGGAATTCCCGTGATGGTCA+CGG 0.550448 5_3:-7614811 Msa0795650:CDS
GAAGCAGGGCAGGGAATGGA+CGG 0.550737 5_3:-7614669 Msa0795650:CDS
CTTACAATTAGGGTTTGTTG+TGG 0.551673 5_3:+7616601 None:intergenic
TTCTTTAGGAATTCCCGTCA+TGG 0.553202 5_3:-7615024 Msa0795650:CDS
CATCCCTCAACGTGAATGAA+AGG 0.553550 5_3:+7617191 None:intergenic
AATGGTGTGAATGGAAGTAA+TGG 0.554671 5_3:+7617292 None:intergenic
GGGCGGATGATATATCCATC+AGG 0.554981 5_3:-7615066 Msa0795650:CDS
CTGTGCAATTTGAGATCTGT+AGG 0.556811 5_3:+7615653 None:intergenic
CCACACCAGCGCCGGCGAGG+CGG 0.558514 5_3:-7616716 Msa0795650:five_prime_UTR
TCCAATGGGGATGTCTACAT+TGG 0.559068 5_3:-7614982 Msa0795650:CDS
AACAATATACCAGGGTGACT+GGG 0.559210 5_3:-7615112 Msa0795650:CDS
GGAAAGTTCACATGGTCAGA+TGG 0.561789 5_3:-7614514 Msa0795650:CDS
TCAAATGGAACAATATATGA+AGG 0.561873 5_3:-7614706 Msa0795650:CDS
GCCAAGGGAAAACGTATGCA+TGG 0.563152 5_3:-7615162 Msa0795650:CDS
GTGATTGGGTTGATGGAAGT+AGG 0.563992 5_3:-7614891 Msa0795650:CDS
TACATTGGTAACTTCAAGAG+TGG 0.564708 5_3:-7614760 Msa0795650:CDS
GGGTTGATGGTAAAAGGAAA+GGG 0.564915 5_3:-7614471 Msa0795650:CDS
GTCAAATGGAACAATATACC+AGG 0.566493 5_3:-7615121 Msa0795650:CDS
GGAAAGTACACATGGTCAGA+TGG 0.566527 5_3:-7614928 Msa0795650:CDS
TGTGAACTTTCCCTTGCCAT+GGG 0.567031 5_3:+7614525 None:intergenic
ATGTGTACTTTCCCTTGCCG+TGG 0.568930 5_3:+7614938 None:intergenic
ATCCCCGTTTGAATTTGTAT+GGG 0.571408 5_3:+7614579 None:intergenic
ATCCACCACCACACCAGCGC+CGG 0.572065 5_3:-7616724 Msa0795650:five_prime_UTR
TCACCGGACATGCACGATGA+TGG 0.572166 5_3:+7617145 None:intergenic
GAGAAGGAGGAGATTGGTCG+TGG 0.574118 5_3:+7616689 None:intergenic
ACCAATGTAGACATCCCCAT+TGG 0.574302 5_3:+7614981 None:intergenic
GGGAAAACGTATGCATGGCA+AGG 0.577918 5_3:-7615157 Msa0795650:CDS
TTCCATCAACCCAGTCACCC+TGG 0.578457 5_3:+7615103 None:intergenic
ATGAATTCCTTCCATGGTCA+CGG 0.581271 5_3:-7614604 Msa0795650:CDS
GGGTTGATGGAAGCAGGGCA+GGG 0.581422 5_3:-7614678 Msa0795650:CDS
ATCAATACAGATTGAAGCAG+CGG 0.584475 5_3:+7615810 None:intergenic
TGTTCCTAATGGACAATGCA+AGG 0.585680 5_3:-7615309 Msa0795650:intron
CCACCACACCAGCGCCGGCG+AGG 0.587224 5_3:-7616719 Msa0795650:five_prime_UTR
GGCACCCTTACAAAATCCAA+TGG 0.587279 5_3:-7614997 Msa0795650:CDS
ATGGATGCCGTGACCATGAA+AGG 0.589956 5_3:+7614390 None:intergenic
GAGTGGTTTACCCCATGGCA+AGG 0.591369 5_3:-7614743 Msa0795650:CDS
TTCAAGAGTGGTTTACCCCA+TGG 0.591425 5_3:-7614748 Msa0795650:CDS
GAAGTAGGACAGGGAAAGGA+CGG 0.592854 5_3:-7614876 Msa0795650:CDS
ACCAATGTAGATATCCCCGT+TGG 0.593680 5_3:+7614774 None:intergenic
TCAAATGGGGAAGTCTACAT+TGG 0.594144 5_3:-7614361 Msa0795650:CDS
CTCAACAAAGACAGAGTGGT+AGG 0.596007 5_3:+7615605 None:intergenic
AGATGCAGCTAGAATCTCGC+AGG 0.596399 5_3:+7615677 None:intergenic
AGATGCAGCTAGAATCTCGC+AGG 0.596399 5_3:+7617053 None:intergenic
TTGTATGGGTGCCGTGACCA+TGG 0.597002 5_3:+7614593 None:intergenic
TACATTGGTAACTTCAAGAG+CGG 0.599946 5_3:-7614553 Msa0795650:CDS
TCAAACGGGGATGTCTACAT+TGG 0.601101 5_3:-7614568 Msa0795650:CDS
TAAGGATGCCGTGACCATCA+CGG 0.601999 5_3:+7614803 None:intergenic
ATGGGTGCCGTGACCATGGA+AGG 0.602986 5_3:+7614597 None:intergenic
GATGGAAGTAGGACAGGGAA+AGG 0.603067 5_3:-7614880 Msa0795650:CDS
GAATGGAAGTAATGGTTGGA+TGG 0.604071 5_3:+7617300 None:intergenic
GAATCGCTCCAATTGCAGAA+AGG 0.604911 5_3:-7615731 Msa0795650:five_prime_UTR
GAATCGCTCCAATTGCAGAA+AGG 0.604911 5_3:-7617112 Msa0795650:five_prime_UTR
TCCAACGGGGATATCTACAT+TGG 0.609663 5_3:-7614775 Msa0795650:CDS
GGCATCCTTACAAAATCCAA+CGG 0.609974 5_3:-7614790 Msa0795650:CDS
ATCTCCGGGAATTCCCGTGA+TGG 0.610724 5_3:-7614817 Msa0795650:CDS
GCGGTGATGGATGGAGAAGG+AGG 0.610844 5_3:+7616676 None:intergenic
ACAGAAGATGGAGGAGTATG+CGG 0.612832 5_3:+7616654 None:intergenic
GATGGTAAAAGGAAAGGGAA+AGG 0.614671 5_3:-7614466 Msa0795650:CDS
TGATTGGGTTGATGGAAGCA+GGG 0.615378 5_3:-7614683 Msa0795650:CDS
AACGTATGCATGGCAAGGGA+AGG 0.615379 5_3:-7615152 Msa0795650:CDS
TTTAAATGGAACAATACATG+AGG 0.616976 5_3:-7614321 Msa0795650:exon
TAAGGGTGCCGTGACCATGA+CGG 0.617165 5_3:+7615010 None:intergenic
AGTGGTTTACCCCATGGCAA+GGG 0.619762 5_3:-7614742 Msa0795650:CDS
GTGTGAATGGAAGTAATGGT+TGG 0.626023 5_3:+7617296 None:intergenic
GGAAAACGTATGCATGGCAA+GGG 0.631325 5_3:-7615156 Msa0795650:CDS
CTGTGTAATTTGAGATGTGT+AGG 0.632816 5_3:+7617029 None:intergenic
CTTCTCCCAACCAAAGCAAG+CGG 0.637042 5_3:-7616758 Msa0795650:five_prime_UTR
GTGTACTTTCCCTTGCCATG+GGG 0.639386 5_3:+7614733 None:intergenic
ATGGAAATAAGACAGGGAAA+GGG 0.639466 5_3:-7615086 Msa0795650:CDS
GCGGCGGTGATGGATGGAGA+AGG 0.641167 5_3:+7616673 None:intergenic
CATGTCCGGTGACCCAACAT+CGG 0.641645 5_3:-7617134 Msa0795650:five_prime_UTR
TAACAACTCAACCTCAACAT+CGG 0.644255 5_3:-7615753 Msa0795650:five_prime_UTR
GAAATAAGACAGGGAAAGGG+CGG 0.648043 5_3:-7615083 Msa0795650:CDS
GGGTTGATGGAAGTAGGACA+GGG 0.648539 5_3:-7614885 Msa0795650:CDS
TCAGATGGAACAATATATGA+GGG 0.653226 5_3:-7614499 Msa0795650:CDS
AGAATCGAAACAGAAGATGG+AGG 0.653768 5_3:+7616645 None:intergenic
TATTCTAAAATCCACGCCAG+AGG 0.656524 5_3:+7615349 None:intergenic
AATACAGATTGAAGCAGCGG+CGG 0.663648 5_3:+7615813 None:intergenic
TACATTGGTAAATTCAAGAG+CGG 0.664149 5_3:-7614346 Msa0795650:CDS
CACCCATACAAATTCAAACG+GGG 0.664180 5_3:-7614581 Msa0795650:CDS
CATCCATACAAATTCAAATG+GGG 0.672466 5_3:-7614374 Msa0795650:CDS
ATGGCAAGGGAAAGTTCACA+TGG 0.680438 5_3:-7614522 Msa0795650:CDS
ATGGCAAGGGAAAGTACACA+TGG 0.692208 5_3:-7614729 Msa0795650:CDS
GAAGATGGAGGAGTATGCGG+CGG 0.693351 5_3:+7616657 None:intergenic
TTAAATGGAACAATACATGA+GGG 0.693624 5_3:-7614320 Msa0795650:exon
ATGGCAAGGGAAGGTACACA+TGG 0.694407 5_3:-7615143 Msa0795650:CDS
GTCAGATGGAGAAATATACG+AGG 0.704885 5_3:-7614914 Msa0795650:CDS
GAGGGTAAATTATCTGACCG+AGG 0.706129 5_3:-7614302 Msa0795650:three_prime_UTR
TCAAATGGAACAATATACCA+GGG 0.706440 5_3:-7615120 Msa0795650:CDS
ACGGCAAGGGAAAGTACACA+TGG 0.716405 5_3:-7614936 Msa0795650:CDS
CACCCTTACAAAATCCAATG+GGG 0.726402 5_3:-7614995 Msa0795650:CDS
TTTACTCAACAAAGACAGAG+TGG 0.729785 5_3:+7615601 None:intergenic
GGGTTGATGGAAATAAGACA+GGG 0.735273 5_3:-7615092 Msa0795650:CDS
TCAGATGGAGAAATATACGA+GGG 0.740857 5_3:-7614913 Msa0795650:CDS
GGGTGTGATAGCAGTCCAGG+CGG 0.742839 5_3:+7617225 None:intergenic
CATCCTTACAAAATCCAACG+GGG 0.776072 5_3:-7614788 Msa0795650:CDS
ACACATCTCAAATTACACAG+CGG 0.777933 5_3:-7617026 Msa0795650:five_prime_UTR
ACAGATCTCAAATTGCACAG+CGG 0.789007 5_3:-7615650 Msa0795650:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTTAAGATG+GGG + chr5_3:7614682-7614701 None:intergenic 10.0%
!!! AATTAATTTTCAATAATAAG+CGG + chr5_3:7616102-7616121 None:intergenic 10.0%
!!! TTTTTTTTATTTTAAGATGG+GGG + chr5_3:7614681-7614700 None:intergenic 15.0%
!! ATTATGTAAAATATTATCAC+AGG + chr5_3:7615394-7615413 None:intergenic 15.0%
!! AATTAACAAAATATTATCAC+AGG + chr5_3:7615531-7615550 None:intergenic 15.0%
!!! TTTATTTTGTTAATTTCACT+TGG - chr5_3:7615549-7615568 Msa0795650:intron 15.0%
!!! ATTTTAGTTTATTTTGATTG+TGG - chr5_3:7615688-7615707 Msa0795650:five_prime_UTR 15.0%
!!! TTTTAGTTTATTTTGATTGT+GGG - chr5_3:7615689-7615708 Msa0795650:five_prime_UTR 15.0%
!!! TTTTATCCTTTTTAGTATTA+TGG - chr5_3:7617298-7617317 Msa0795650:five_prime_UTR 15.0%
!!! ATTTTTTATGGTGGTTTTAA+TGG + chr5_3:7614298-7614317 None:intergenic 20.0%
!!! TGAGATTGAGTAATTTTTTA+TGG + chr5_3:7614310-7614329 None:intergenic 20.0%
!! AAATTCTGCAAATTAATGAA+GGG + chr5_3:7614733-7614752 None:intergenic 20.0%
!! TTCACATTAACTTACAATTA+GGG + chr5_3:7614981-7615000 None:intergenic 20.0%
!! TTTCACATTAACTTACAATT+AGG + chr5_3:7614982-7615001 None:intergenic 20.0%
!!! TAGTTTAAATTTTGAACGAT+CGG - chr5_3:7615616-7615635 Msa0795650:five_prime_UTR 20.0%
!! AGGATAAAAATAATTTACCT+CGG + chr5_3:7617287-7617306 None:intergenic 20.0%
!!! AGTTTTCCATAATACTAAAA+AGG + chr5_3:7617307-7617326 None:intergenic 20.0%
!!! GATTGAGTAATTTTTTATGG+TGG + chr5_3:7614307-7614326 None:intergenic 25.0%
! GAAATTCTGCAAATTAATGA+AGG + chr5_3:7614734-7614753 None:intergenic 25.0%
! CAAATCAGAATCATAATTGA+AGG + chr5_3:7615018-7615037 None:intergenic 25.0%
!!! TTTTTTAGGGTTATTTGCAT+TGG - chr5_3:7615091-7615110 Msa0795650:CDS 25.0%
!!! TTTTTAGGGTTATTTGCATT+GGG - chr5_3:7615092-7615111 Msa0795650:CDS 25.0%
!!! ATTGGGATTGTTTTGTTTTT+AGG - chr5_3:7615109-7615128 Msa0795650:CDS 25.0%
!!! TTGGGATTGTTTTGTTTTTA+GGG - chr5_3:7615110-7615129 Msa0795650:CDS 25.0%
! TTGATGTAATTAGATGTGTT+AGG - chr5_3:7615488-7615507 Msa0795650:intron 25.0%
!!! TCTGTATTGATTTGATTTTG+AGG - chr5_3:7615771-7615790 Msa0795650:five_prime_UTR 25.0%
! AATACATGGATATAGAATAG+TGG + chr5_3:7616306-7616325 None:intergenic 25.0%
! TCAAATGGAACAATATATGA+AGG - chr5_3:7616863-7616882 Msa0795650:intron 25.0%
! AACAATATATGAAGGTGATT+GGG - chr5_3:7616871-7616890 Msa0795650:intron 25.0%
! TTTAAATGGAACAATACATG+AGG - chr5_3:7617248-7617267 Msa0795650:five_prime_UTR 25.0%
! TTAAATGGAACAATACATGA+GGG - chr5_3:7617249-7617268 Msa0795650:five_prime_UTR 25.0%
!!! TTTTTATTTTAAGATGGGGG+TGG + chr5_3:7614678-7614697 None:intergenic 30.0%
TTGCAGAATTTCTGATTGAA+AGG - chr5_3:7614742-7614761 Msa0795650:CDS 30.0%
!!! ACTTCCATCTGTTGTTTTTT+AGG - chr5_3:7615077-7615096 Msa0795650:CDS 30.0%
!!! CTTCCATCTGTTGTTTTTTA+GGG - chr5_3:7615078-7615097 Msa0795650:CDS 30.0%
TAACCCTAAAAAACAACAGA+TGG + chr5_3:7615084-7615103 None:intergenic 30.0%
TCAGAGAATAATAAGCAGAA+AGG - chr5_3:7615303-7615322 Msa0795650:intron 30.0%
GAATAATAAGCAGAAAGGAA+TGG - chr5_3:7615308-7615327 Msa0795650:intron 30.0%
ACAATGAAACAAAGATGTGT+TGG - chr5_3:7615350-7615369 Msa0795650:CDS 30.0%
CAATGAAACAAAGATGTGTT+GGG - chr5_3:7615351-7615370 Msa0795650:CDS 30.0%
! CTATTTTCGATTTACTGTCT+TGG - chr5_3:7616072-7616091 Msa0795650:five_prime_UTR 30.0%
AAGCAGTCTGAAAAAACATA+TGG + chr5_3:7616134-7616153 None:intergenic 30.0%
!!! CTTGTTTTACTTGTTCCTAA+TGG - chr5_3:7616249-7616268 Msa0795650:five_prime_UTR 30.0%
GAGATGACAATCATAATACA+TGG + chr5_3:7616320-7616339 None:intergenic 30.0%
AATGCTTCACTTTAAACCTA+GGG + chr5_3:7616358-7616377 None:intergenic 30.0%
AAATGCTTCACTTTAAACCT+AGG + chr5_3:7616359-7616378 None:intergenic 30.0%
!! AAAGTGAAGCATTTTCCAAA+TGG - chr5_3:7616365-7616384 Msa0795650:intron 30.0%
TCAAATGGAACAATATACCA+GGG - chr5_3:7616449-7616468 Msa0795650:intron 30.0%
GAACAATATATGAAGGTGAT+TGG - chr5_3:7616870-7616889 Msa0795650:intron 30.0%
TCAGATGGAACAATATATGA+GGG - chr5_3:7617070-7617089 Msa0795650:five_prime_UTR 30.0%
AACAATATATGAGGGTGATT+GGG - chr5_3:7617078-7617097 Msa0795650:five_prime_UTR 30.0%
GCATCCATACAAATTCAAAT+GGG - chr5_3:7617194-7617213 Msa0795650:five_prime_UTR 30.0%
CATCCATACAAATTCAAATG+GGG - chr5_3:7617195-7617214 Msa0795650:five_prime_UTR 30.0%
TACATTGGTAAATTCAAGAG+CGG - chr5_3:7617223-7617242 Msa0795650:five_prime_UTR 30.0%
AATGGTGTGAATGGAAGTAA+TGG + chr5_3:7614280-7614299 None:intergenic 35.0%
! CTGTGTAATTTGAGATGTGT+AGG + chr5_3:7614543-7614562 None:intergenic 35.0%
ACACATCTCAAATTACACAG+CGG - chr5_3:7614543-7614562 Msa0795650:CDS 35.0%
CACTTCACTTTACTTCAATC+CGG - chr5_3:7614618-7614637 Msa0795650:CDS 35.0%
CAGAATTTCTGATTGAAAGG+AGG - chr5_3:7614745-7614764 Msa0795650:CDS 35.0%
AAGAATAGAGATCGCGTTAA+GGG + chr5_3:7614794-7614813 None:intergenic 35.0%
TGAAGAATCGAAACAGAAGA+TGG + chr5_3:7614930-7614949 None:intergenic 35.0%
!! CTTACAATTAGGGTTTGTTG+TGG + chr5_3:7614971-7614990 None:intergenic 35.0%
ACAGATGGAAGTAAAACTCA+AGG + chr5_3:7615069-7615088 None:intergenic 35.0%
TTTCATTGTTCTACTGTCAC+AGG + chr5_3:7615430-7615449 None:intergenic 35.0%
!!! TTATTTTGATTGTGGGTTGC+CGG - chr5_3:7615696-7615715 Msa0795650:five_prime_UTR 35.0%
ATCAATACAGATTGAAGCAG+CGG + chr5_3:7615762-7615781 None:intergenic 35.0%
TAACAACTCAACCTCAACAT+CGG - chr5_3:7615816-7615835 Msa0795650:five_prime_UTR 35.0%
TTTACTCAACAAAGACAGAG+TGG + chr5_3:7615971-7615990 None:intergenic 35.0%
! AGTTGTGTCTTTGTTTGTAC+TGG + chr5_3:7616157-7616176 None:intergenic 35.0%
AAGTGATCAAATGTTTCCTC+TGG - chr5_3:7616204-7616223 Msa0795650:five_prime_UTR 35.0%
ATTACCTTGCATTGTCCATT+AGG + chr5_3:7616267-7616286 None:intergenic 35.0%
GTCAAATGGAACAATATACC+AGG - chr5_3:7616448-7616467 Msa0795650:intron 35.0%
ATGGAAATAAGACAGGGAAA+GGG - chr5_3:7616483-7616502 Msa0795650:intron 35.0%
! ATCCCCATTGGATTTTGTAA+GGG + chr5_3:7616579-7616598 None:intergenic 35.0%
! TTCGAGAATGATCTTTTCCA+CGG - chr5_3:7616614-7616633 Msa0795650:five_prime_UTR 35.0%
TCAGATGGAGAAATATACGA+GGG - chr5_3:7616656-7616675 Msa0795650:five_prime_UTR 35.0%
AGAAATATACGAGGGTGATT+GGG - chr5_3:7616664-7616683 Msa0795650:five_prime_UTR 35.0%
! TACATTGGTAACTTCAAGAG+TGG - chr5_3:7616809-7616828 Msa0795650:five_prime_UTR 35.0%
TTCTCTATGAATTCCTTCCA+TGG - chr5_3:7616959-7616978 Msa0795650:intron 35.0%
ATCCCCGTTTGAATTTGTAT+GGG + chr5_3:7616993-7617012 None:intergenic 35.0%
! TACATTGGTAACTTCAAGAG+CGG - chr5_3:7616809-7616828 Msa0795650:five_prime_UTR 35.0%
GTCAGATGGAACAATATATG+AGG - chr5_3:7617069-7617088 Msa0795650:five_prime_UTR 35.0%
GAACAATATATGAGGGTGAT+TGG - chr5_3:7617077-7617096 Msa0795650:five_prime_UTR 35.0%
GGAAGAATCATATATCCATC+AGG - chr5_3:7617124-7617143 Msa0795650:five_prime_UTR 35.0%
GGCATCCATACAAATTCAAA+TGG - chr5_3:7617193-7617212 Msa0795650:five_prime_UTR 35.0%
CTTCCCCATTTGAATTTGTA+TGG + chr5_3:7617201-7617220 None:intergenic 35.0%
ATTCAAGAGCGGTGTTTAAA+TGG - chr5_3:7617234-7617253 Msa0795650:five_prime_UTR 35.0%
GAATGGAAGTAATGGTTGGA+TGG + chr5_3:7614272-7614291 None:intergenic 40.0%
GTGTGAATGGAAGTAATGGT+TGG + chr5_3:7614276-7614295 None:intergenic 40.0%
!!! GGTGGTTTTAATGGTGTGAA+TGG + chr5_3:7614289-7614308 None:intergenic 40.0%
CACATCTCAAATTACACAGC+GGG - chr5_3:7614544-7614563 Msa0795650:CDS 40.0%
TATCACACTCAGTCTCTGTT+GGG - chr5_3:7614590-7614609 Msa0795650:CDS 40.0%
CGGATTGAAGTAAAGTGAAG+TGG + chr5_3:7614620-7614639 None:intergenic 40.0%
TTCACTTTACTTCAATCCGG+TGG - chr5_3:7614621-7614640 Msa0795650:CDS 40.0%
!!! TTATTTTAAGATGGGGGTGG+CGG + chr5_3:7614675-7614694 None:intergenic 40.0%
GAAGAATAGAGATCGCGTTA+AGG + chr5_3:7614795-7614814 None:intergenic 40.0%
AGAATCGAAACAGAAGATGG+AGG + chr5_3:7614927-7614946 None:intergenic 40.0%
CGCTGGATATTACAAGCTTA+TGG + chr5_3:7615173-7615192 None:intergenic 40.0%
AAAGCGTACAGTGCATCTAT+AGG - chr5_3:7615572-7615591 Msa0795650:intron 40.0%
GAGCCAGACAAAAAAGTTTG+GGG + chr5_3:7615725-7615744 None:intergenic 40.0%
GGAGCCAGACAAAAAAGTTT+GGG + chr5_3:7615726-7615745 None:intergenic 40.0%
! CTGTGCAATTTGAGATCTGT+AGG + chr5_3:7615919-7615938 None:intergenic 40.0%
ACAGATCTCAAATTGCACAG+CGG - chr5_3:7615919-7615938 Msa0795650:five_prime_UTR 40.0%
ACAGACAGAGTGAAGTGAAA+TGG + chr5_3:7615994-7616013 None:intergenic 40.0%
!! TATTCTAAAATCCACGCCAG+AGG + chr5_3:7616223-7616242 None:intergenic 40.0%
! TGTTCCTAATGGACAATGCA+AGG - chr5_3:7616260-7616279 Msa0795650:intron 40.0%
CATCGTTTCTTGTAATCCCT+AGG - chr5_3:7616339-7616358 Msa0795650:intron 40.0%
!!! TGTCTACATTGGTTTTGCCA+AGG - chr5_3:7616391-7616410 Msa0795650:intron 40.0%
!!! GTCTACATTGGTTTTGCCAA+GGG - chr5_3:7616392-7616411 Msa0795650:intron 40.0%
AACAATATACCAGGGTGACT+GGG - chr5_3:7616457-7616476 Msa0795650:intron 40.0%
!! TGGGTTGATGGAAATAAGAC+AGG - chr5_3:7616476-7616495 Msa0795650:intron 40.0%
!! GGGTTGATGGAAATAAGACA+GGG - chr5_3:7616477-7616496 Msa0795650:intron 40.0%
GATGGAAATAAGACAGGGAA+AGG - chr5_3:7616482-7616501 Msa0795650:intron 40.0%
!!! GTTTTGAGGGTGGATTCTTT+AGG - chr5_3:7616531-7616550 Msa0795650:intron 40.0%
! TTCTTTAGGAATTCCCGTCA+TGG - chr5_3:7616545-7616564 Msa0795650:intron 40.0%
GCACCCTTACAAAATCCAAT+GGG - chr5_3:7616573-7616592 Msa0795650:five_prime_UTR 40.0%
CACCCTTACAAAATCCAATG+GGG - chr5_3:7616574-7616593 Msa0795650:five_prime_UTR 40.0%
! CATCCCCATTGGATTTTGTA+AGG + chr5_3:7616580-7616599 None:intergenic 40.0%
! AATGATCTTTTCCACGGCAA+GGG - chr5_3:7616620-7616639 Msa0795650:five_prime_UTR 40.0%
GTCAGATGGAGAAATATACG+AGG - chr5_3:7616655-7616674 Msa0795650:five_prime_UTR 40.0%
GAGAAATATACGAGGGTGAT+TGG - chr5_3:7616663-7616682 Msa0795650:five_prime_UTR 40.0%
! TCCATCAGGAACAACTTTTG+AGG - chr5_3:7616724-7616743 Msa0795650:five_prime_UTR 40.0%
! CCATCAGGAACAACTTTTGA+GGG - chr5_3:7616725-7616744 Msa0795650:five_prime_UTR 40.0%
!! ACTTTTGAGGGTGAAATCTC+CGG - chr5_3:7616737-7616756 Msa0795650:five_prime_UTR 40.0%
GGCATCCTTACAAAATCCAA+CGG - chr5_3:7616779-7616798 Msa0795650:five_prime_UTR 40.0%
GCATCCTTACAAAATCCAAC+GGG - chr5_3:7616780-7616799 Msa0795650:five_prime_UTR 40.0%
CATCCTTACAAAATCCAACG+GGG - chr5_3:7616781-7616800 Msa0795650:five_prime_UTR 40.0%
! TATCCCCGTTGGATTTTGTA+AGG + chr5_3:7616787-7616806 None:intergenic 40.0%
! GGAAAGTACACATGGTCAAA+TGG - chr5_3:7616848-7616867 Msa0795650:intron 40.0%
!! TATGAAGGTGATTGGGTTGA+TGG - chr5_3:7616878-7616897 Msa0795650:intron 40.0%
! TCCATCAGGAACAACTTTTG+AGG - chr5_3:7616724-7616743 Msa0795650:five_prime_UTR 40.0%
! CCATCAGGAACAACTTTTGA+GGG - chr5_3:7616725-7616744 Msa0795650:five_prime_UTR 40.0%
ATGAATTCCTTCCATGGTCA+CGG - chr5_3:7616965-7616984 Msa0795650:intron 40.0%
GGCACCCATACAAATTCAAA+CGG - chr5_3:7616986-7617005 Msa0795650:five_prime_UTR 40.0%
GCACCCATACAAATTCAAAC+GGG - chr5_3:7616987-7617006 Msa0795650:five_prime_UTR 40.0%
CACCCATACAAATTCAAACG+GGG - chr5_3:7616988-7617007 Msa0795650:five_prime_UTR 40.0%
CATCCCCGTTTGAATTTGTA+TGG + chr5_3:7616994-7617013 None:intergenic 40.0%
!! GTGATTGGGTTGATGGTAAA+AGG - chr5_3:7617092-7617111 Msa0795650:five_prime_UTR 40.0%
!! TGGGTTGATGGTAAAAGGAA+AGG - chr5_3:7617097-7617116 Msa0795650:five_prime_UTR 40.0%
!! GGGTTGATGGTAAAAGGAAA+GGG - chr5_3:7617098-7617117 Msa0795650:five_prime_UTR 40.0%
GATGGTAAAAGGAAAGGGAA+AGG - chr5_3:7617103-7617122 Msa0795650:five_prime_UTR 40.0%
! TTCTCTGGGAATTCCTTTCA+TGG - chr5_3:7617166-7617185 Msa0795650:five_prime_UTR 40.0%
TCAAATGGGGAAGTCTACAT+TGG - chr5_3:7617208-7617227 Msa0795650:five_prime_UTR 40.0%
AATGAAAGGCGAGCGCATTA+GGG + chr5_3:7614367-7614386 None:intergenic 45.0%
TCGCCTTTCATTCACGTTGA+GGG - chr5_3:7614375-7614394 Msa0795650:CDS 45.0%
CATCCCTCAACGTGAATGAA+AGG + chr5_3:7614381-7614400 None:intergenic 45.0%
! ATGCACGATGATGGTGTTCA+GGG + chr5_3:7614418-7614437 None:intergenic 45.0%
ATTGGAGCGATTCCGATGTT+GGG + chr5_3:7614450-7614469 None:intergenic 45.0%
AATTGGAGCGATTCCGATGT+TGG + chr5_3:7614451-7614470 None:intergenic 45.0%
GAATCGCTCCAATTGCAGAA+AGG - chr5_3:7614457-7614476 Msa0795650:CDS 45.0%
GTCACTCTCCTTTCTGCAAT+TGG + chr5_3:7614468-7614487 None:intergenic 45.0%
CAACAGAGACTGAGTGTGAT+AGG + chr5_3:7614591-7614610 None:intergenic 45.0%
CTATCACACTCAGTCTCTGT+TGG - chr5_3:7614589-7614608 Msa0795650:CDS 45.0%
ACTTTACTTCAATCCGGTGG+CGG - chr5_3:7614624-7614643 Msa0795650:CDS 45.0%
TAATGTTTGGCCGCTTGCTT+TGG + chr5_3:7614824-7614843 None:intergenic 45.0%
!! GTGGTGGTGGATGTAATGTT+TGG + chr5_3:7614837-7614856 None:intergenic 45.0%
! ACAGAAGATGGAGGAGTATG+CGG + chr5_3:7614918-7614937 None:intergenic 45.0%
! ACAAAAAAGTTTGGGGTGGC+CGG + chr5_3:7615718-7615737 None:intergenic 45.0%
CCAGACAAAAAAGTTTGGGG+TGG + chr5_3:7615722-7615741 None:intergenic 45.0%
!!! CCACCCCAAACTTTTTTGTC+TGG - chr5_3:7615719-7615738 Msa0795650:five_prime_UTR 45.0%
CGGAGCCAGACAAAAAAGTT+TGG + chr5_3:7615727-7615746 None:intergenic 45.0%
AATACAGATTGAAGCAGCGG+CGG + chr5_3:7615759-7615778 None:intergenic 45.0%
GAATCGCTCCAATTGCAGAA+AGG - chr5_3:7614457-7614476 Msa0795650:CDS 45.0%
GTCACTCTCCTTTCTGCAAT+TGG + chr5_3:7614468-7614487 None:intergenic 45.0%
CAGATCTCAAATTGCACAGC+GGG - chr5_3:7615920-7615939 Msa0795650:five_prime_UTR 45.0%
CTCAACAAAGACAGAGTGGT+AGG + chr5_3:7615967-7615986 None:intergenic 45.0%
ATCAAATGTTTCCTCTGGCG+TGG - chr5_3:7616209-7616228 Msa0795650:five_prime_UTR 45.0%
CCAATGTAGACATCGCCATT+TGG + chr5_3:7616383-7616402 None:intergenic 45.0%
CCAAATGGCGATGTCTACAT+TGG - chr5_3:7616380-7616399 Msa0795650:intron 45.0%
GGAAAACGTATGCATGGCAA+GGG - chr5_3:7616413-7616432 Msa0795650:intron 45.0%
! GGAAGGTACACATGGTCAAA+TGG - chr5_3:7616434-7616453 Msa0795650:intron 45.0%
GAACAATATACCAGGGTGAC+TGG - chr5_3:7616456-7616475 Msa0795650:intron 45.0%
GAAATAAGACAGGGAAAGGG+CGG - chr5_3:7616486-7616505 Msa0795650:intron 45.0%
! TCCATCAGGAGCAAGTTTTG+AGG - chr5_3:7616517-7616536 Msa0795650:intron 45.0%
!! CCATCAGGAGCAAGTTTTGA+GGG - chr5_3:7616518-7616537 Msa0795650:intron 45.0%
GGCACCCTTACAAAATCCAA+TGG - chr5_3:7616572-7616591 Msa0795650:five_prime_UTR 45.0%
TCCAATGGGGATGTCTACAT+TGG - chr5_3:7616587-7616606 Msa0795650:five_prime_UTR 45.0%
ACCAATGTAGACATCCCCAT+TGG + chr5_3:7616591-7616610 None:intergenic 45.0%
! GAATGATCTTTTCCACGGCA+AGG - chr5_3:7616619-7616638 Msa0795650:five_prime_UTR 45.0%
! GGAAAGTACACATGGTCAGA+TGG - chr5_3:7616641-7616660 Msa0795650:five_prime_UTR 45.0%
!! GTGATTGGGTTGATGGAAGT+AGG - chr5_3:7616678-7616697 Msa0795650:five_prime_UTR 45.0%
GGACGGATCATATTTCCATC+AGG - chr5_3:7616710-7616729 Msa0795650:five_prime_UTR 45.0%
CCCTCAAAAGTTGTTCCTGA+TGG + chr5_3:7616728-7616747 None:intergenic 45.0%
!! CTTTTGAGGGTGAAATCTCC+GGG - chr5_3:7616738-7616757 Msa0795650:five_prime_UTR 45.0%
TCCAACGGGGATATCTACAT+TGG - chr5_3:7616794-7616813 Msa0795650:five_prime_UTR 45.0%
ACCAATGTAGATATCCCCGT+TGG + chr5_3:7616798-7616817 None:intergenic 45.0%
TTCAAGAGTGGTTTACCCCA+TGG - chr5_3:7616821-7616840 Msa0795650:five_prime_UTR 45.0%
TGTGTACTTTCCCTTGCCAT+GGG + chr5_3:7616840-7616859 None:intergenic 45.0%
ATGTGTACTTTCCCTTGCCA+TGG + chr5_3:7616841-7616860 None:intergenic 45.0%
! ATGGCAAGGGAAAGTACACA+TGG - chr5_3:7616840-7616859 Msa0795650:intron 45.0%
!! TGATTGGGTTGATGGAAGCA+GGG - chr5_3:7616886-7616905 Msa0795650:intron 45.0%
GGACGGATCATATATCCATC+AGG - chr5_3:7616917-7616936 Msa0795650:intron 45.0%
CCCTCAAAAGTTGTTCCTGA+TGG + chr5_3:7616728-7616747 None:intergenic 45.0%
TCAAACGGGGATGTCTACAT+TGG - chr5_3:7617001-7617020 Msa0795650:five_prime_UTR 45.0%
! TTCAAGAGCGGTTTTTCCCA+TGG - chr5_3:7617028-7617047 Msa0795650:five_prime_UTR 45.0%
TGTGAACTTTCCCTTGCCAT+GGG + chr5_3:7617047-7617066 None:intergenic 45.0%
ATGTGAACTTTCCCTTGCCA+TGG + chr5_3:7617048-7617067 None:intergenic 45.0%
ATGGCAAGGGAAAGTTCACA+TGG - chr5_3:7617047-7617066 Msa0795650:five_prime_UTR 45.0%
GGAAAGTTCACATGGTCAGA+TGG - chr5_3:7617055-7617074 Msa0795650:five_prime_UTR 45.0%
!! TATGAGGGTGATTGGGTTGA+TGG - chr5_3:7617085-7617104 Msa0795650:five_prime_UTR 45.0%
! TCCATCAGGAGCAAGTTTTG+AGG - chr5_3:7616517-7616536 Msa0795650:intron 45.0%
!! CCATCAGGAGCAAGTTTTGA+GGG - chr5_3:7616518-7616537 Msa0795650:intron 45.0%
!!! AGTTTTGAGGGCGAATTCTC+TGG - chr5_3:7617151-7617170 Msa0795650:five_prime_UTR 45.0%
!!! GTTTTGAGGGCGAATTCTCT+GGG - chr5_3:7617152-7617171 Msa0795650:five_prime_UTR 45.0%
GGGAATTCCTTTCATGGTCA+CGG - chr5_3:7617172-7617191 Msa0795650:five_prime_UTR 45.0%
GAGGGTAAATTATCTGACCG+AGG - chr5_3:7617267-7617286 Msa0795650:five_prime_UTR 45.0%
!!! TTTTTTTTTTATTTTAAGAT+GGG + chr5_3:7614683-7614702 None:intergenic 5.0%
!!! TTTTTTTTTTTATTTTAAGA+TGG + chr5_3:7614684-7614703 None:intergenic 5.0%
!! AAAAAAAAAAAATTATATAC+TGG - chr5_3:7614693-7614712 Msa0795650:CDS 5.0%
AAACCAAAACCAGATCCGCC+TGG - chr5_3:7614329-7614348 Msa0795650:exon 50.0%
TTAGGGTGTGATAGCAGTCC+AGG + chr5_3:7614350-7614369 None:intergenic 50.0%
GAATGAAAGGCGAGCGCATT+AGG + chr5_3:7614368-7614387 None:intergenic 50.0%
CTCGCCTTTCATTCACGTTG+AGG - chr5_3:7614374-7614393 Msa0795650:CDS 50.0%
! ATGATGGTGTTCAGGGAAGC+GGG + chr5_3:7614411-7614430 None:intergenic 50.0%
! GATGATGGTGTTCAGGGAAG+CGG + chr5_3:7614412-7614431 None:intergenic 50.0%
! CATGCACGATGATGGTGTTC+AGG + chr5_3:7614419-7614438 None:intergenic 50.0%
ACACCATCATCGTGCATGTC+CGG - chr5_3:7614421-7614440 Msa0795650:CDS 50.0%
AGATGCAGCTAGAATCTCGC+AGG + chr5_3:7614519-7614538 None:intergenic 50.0%
CTTCTCCCAACCAAAGCAAG+CGG - chr5_3:7614811-7614830 Msa0795650:CDS 50.0%
TTTGGCCGCTTGCTTTGGTT+GGG + chr5_3:7614819-7614838 None:intergenic 50.0%
TGGATGGAGAAGGAGGAGAT+TGG + chr5_3:7614889-7614908 None:intergenic 50.0%
CTGTTATCACTTTGCAGCGC+TGG + chr5_3:7615190-7615209 None:intergenic 50.0%
TTGGAGCGATTCCGATGTTG+AGG + chr5_3:7614449-7614468 None:intergenic 50.0%
AGATGCAGCTAGAATCTCGC+AGG + chr5_3:7614519-7614538 None:intergenic 50.0%
GCCAAGGGAAAACGTATGCA+TGG - chr5_3:7616407-7616426 Msa0795650:intron 50.0%
! GCCATGCATACGTTTTCCCT+TGG + chr5_3:7616411-7616430 None:intergenic 50.0%
GGGAAAACGTATGCATGGCA+AGG - chr5_3:7616412-7616431 Msa0795650:intron 50.0%
AACGTATGCATGGCAAGGGA+AGG - chr5_3:7616417-7616436 Msa0795650:intron 50.0%
! ATGGCAAGGGAAGGTACACA+TGG - chr5_3:7616426-7616445 Msa0795650:intron 50.0%
GGGCGGATGATATATCCATC+AGG - chr5_3:7616503-7616522 Msa0795650:intron 50.0%
! CCCTCAAAACTTGCTCCTGA+TGG + chr5_3:7616521-7616540 None:intergenic 50.0%
!!! TCAGGAGCAAGTTTTGAGGG+TGG - chr5_3:7616521-7616540 Msa0795650:intron 50.0%
AGGAATTCCCGTCATGGTCA+CGG - chr5_3:7616551-7616570 Msa0795650:five_prime_UTR 50.0%
ATGTGTACTTTCCCTTGCCG+TGG + chr5_3:7616634-7616653 None:intergenic 50.0%
! ACGGCAAGGGAAAGTACACA+TGG - chr5_3:7616633-7616652 Msa0795650:five_prime_UTR 50.0%
!! TACGAGGGTGATTGGGTTGA+TGG - chr5_3:7616671-7616690 Msa0795650:five_prime_UTR 50.0%
!! TGGGTTGATGGAAGTAGGAC+AGG - chr5_3:7616683-7616702 Msa0795650:five_prime_UTR 50.0%
!! GGGTTGATGGAAGTAGGACA+GGG - chr5_3:7616684-7616703 Msa0795650:five_prime_UTR 50.0%
GATGGAAGTAGGACAGGGAA+AGG - chr5_3:7616689-7616708 Msa0795650:five_prime_UTR 50.0%
GAAGTAGGACAGGGAAAGGA+CGG - chr5_3:7616693-7616712 Msa0795650:five_prime_UTR 50.0%
TAAGGATGCCGTGACCATCA+CGG + chr5_3:7616769-7616788 None:intergenic 50.0%
AGTGGTTTACCCCATGGCAA+GGG - chr5_3:7616827-7616846 Msa0795650:intron 50.0%
GTGTACTTTCCCTTGCCATG+GGG + chr5_3:7616839-7616858 None:intergenic 50.0%
!! GTGATTGGGTTGATGGAAGC+AGG - chr5_3:7616885-7616904 Msa0795650:intron 50.0%
! AGCGGTTTTTCCCATGGCAA+GGG - chr5_3:7617034-7617053 Msa0795650:five_prime_UTR 50.0%
! CCCTCAAAACTTGCTCCTGA+TGG + chr5_3:7616521-7616540 None:intergenic 50.0%
ATGGATGCCGTGACCATGAA+AGG + chr5_3:7617182-7617201 None:intergenic 50.0%
!! AGTCCAGGCGGATCTGGTTT+TGG + chr5_3:7614335-7614354 None:intergenic 55.0%
TCACCGGACATGCACGATGA+TGG + chr5_3:7614427-7614446 None:intergenic 55.0%
CATGTCCGGTGACCCAACAT+CGG - chr5_3:7614435-7614454 Msa0795650:CDS 55.0%
CGATTCCGATGTTGGGTCAC+CGG + chr5_3:7614443-7614462 None:intergenic 55.0%
!! TTCAATCCGGTGGCGGAACT+GGG - chr5_3:7614631-7614650 Msa0795650:CDS 55.0%
!!! TTTTAAGATGGGGGTGGCGG+TGG + chr5_3:7614672-7614691 None:intergenic 55.0%
GTTTGGCCGCTTGCTTTGGT+TGG + chr5_3:7614820-7614839 None:intergenic 55.0%
! GAGAAGGAGGAGATTGGTCG+TGG + chr5_3:7614883-7614902 None:intergenic 55.0%
! GAAGATGGAGGAGTATGCGG+CGG + chr5_3:7614915-7614934 None:intergenic 55.0%
! TACCAGGGTGACTGGGTTGA+TGG - chr5_3:7616464-7616483 Msa0795650:intron 55.0%
TTCCATCAACCCAGTCACCC+TGG + chr5_3:7616469-7616488 None:intergenic 55.0%
!! TAAGGGTGCCGTGACCATGA+CGG + chr5_3:7616562-7616581 None:intergenic 55.0%
ATCTCCGGGAATTCCCGTGA+TGG - chr5_3:7616752-7616771 Msa0795650:five_prime_UTR 55.0%
GTGACCATCACGGGAATTCC+CGG + chr5_3:7616759-7616778 None:intergenic 55.0%
GGGAATTCCCGTGATGGTCA+CGG - chr5_3:7616758-7616777 Msa0795650:five_prime_UTR 55.0%
AAGGATGCCGTGACCATCAC+GGG + chr5_3:7616768-7616787 None:intergenic 55.0%
GAGTGGTTTACCCCATGGCA+AGG - chr5_3:7616826-7616845 Msa0795650:intron 55.0%
! TTGTATGGGTGCCGTGACCA+TGG + chr5_3:7616979-7616998 None:intergenic 55.0%
! GAGCGGTTTTTCCCATGGCA+AGG - chr5_3:7617033-7617052 Msa0795650:five_prime_UTR 55.0%
GATAGCAGTCCAGGCGGATC+TGG + chr5_3:7614341-7614360 None:intergenic 60.0%
GGGTGTGATAGCAGTCCAGG+CGG + chr5_3:7614347-7614366 None:intergenic 60.0%
!! CTTCAATCCGGTGGCGGAAC+TGG - chr5_3:7614630-7614649 Msa0795650:CDS 60.0%
!! TCAATCCGGTGGCGGAACTG+GGG - chr5_3:7614632-7614651 Msa0795650:CDS 60.0%
!! GCGGTGATGGATGGAGAAGG+AGG + chr5_3:7614896-7614915 None:intergenic 60.0%
!! GAGTATGCGGCGGTGATGGA+TGG + chr5_3:7614905-7614924 None:intergenic 60.0%
!! AAGGGTGCCGTGACCATGAC+GGG + chr5_3:7616561-7616580 None:intergenic 60.0%
!! TGGGTTGATGGAAGCAGGGC+AGG - chr5_3:7616890-7616909 Msa0795650:intron 60.0%
!! GGGTTGATGGAAGCAGGGCA+GGG - chr5_3:7616891-7616910 Msa0795650:intron 60.0%
GATGGAAGCAGGGCAGGGAA+TGG - chr5_3:7616896-7616915 Msa0795650:intron 60.0%
GAAGCAGGGCAGGGAATGGA+CGG - chr5_3:7616900-7616919 Msa0795650:intron 60.0%
! ATGGGTGCCGTGACCATGGA+AGG + chr5_3:7616975-7616994 None:intergenic 60.0%
!! CAATCCGGTGGCGGAACTGG+GGG - chr5_3:7614633-7614652 Msa0795650:CDS 65.0%
ATCCACCACCACACCAGCGC+CGG - chr5_3:7614845-7614864 Msa0795650:CDS 65.0%
!! GCGGCGGTGATGGATGGAGA+AGG + chr5_3:7614899-7614918 None:intergenic 65.0%
! GGAGGAGTATGCGGCGGTGA+TGG + chr5_3:7614909-7614928 None:intergenic 65.0%
TGAAGCAGCGGCGGAAGCAG+TGG + chr5_3:7615750-7615769 None:intergenic 65.0%
TGGCGGAACTGGGGGTGGCA+AGG - chr5_3:7614641-7614660 Msa0795650:CDS 70.0%
GGCGGAACTGGGGGTGGCAA+GGG - chr5_3:7614642-7614661 Msa0795650:CDS 70.0%
GCGGAACTGGGGGTGGCAAG+GGG - chr5_3:7614643-7614662 Msa0795650:CDS 70.0%
CGGAACTGGGGGTGGCAAGG+GGG - chr5_3:7614644-7614663 Msa0795650:CDS 70.0%
AGCAGCGGCGGAAGCAGTGG+CGG + chr5_3:7615747-7615766 None:intergenic 70.0%
!! TCCGGTGGCGGAACTGGGGG+TGG - chr5_3:7614636-7614655 Msa0795650:CDS 75.0%
GCCACCCCCAGTTCCGCCAC+CGG + chr5_3:7614640-7614659 None:intergenic 75.0%
!!! CGCCGGCGCTGGTGTGGTGG+TGG + chr5_3:7614850-7614869 None:intergenic 80.0%
!!! CCTCGCCGGCGCTGGTGTGG+TGG + chr5_3:7614853-7614872 None:intergenic 80.0%
!!! CCACCACACCAGCGCCGGCG+AGG - chr5_3:7614850-7614869 Msa0795650:CDS 80.0%
!!! CCACACCAGCGCCGGCGAGG+CGG - chr5_3:7614853-7614872 Msa0795650:CDS 80.0%
! GTCGTGGCTCGCCGCCTCGC+CGG + chr5_3:7614867-7614886 None:intergenic 80.0%
!!! CCGCCTCGCCGGCGCTGGTG+TGG + chr5_3:7614856-7614875 None:intergenic 85.0%
! GCTCGCCGCCTCGCCGGCGC+TGG + chr5_3:7614861-7614880 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 7614247 7617344 7614247 ID=Msa0795650;Name=Msa0795650
chr5_3 mRNA 7614247 7617344 7614247 ID=Msa0795650-mRNA-1;Parent=Msa0795650;Name=Msa0795650-mRNA-1;_AED=0.28;_eAED=0.28;_QI=1390|1|1|1|0.25|0.2|5|92|319
chr5_3 exon 7614247 7615230 7614247 ID=Msa0795650-mRNA-1:exon:3167;Parent=Msa0795650-mRNA-1
chr5_3 exon 7615310 7615444 7615310 ID=Msa0795650-mRNA-1:exon:3166;Parent=Msa0795650-mRNA-1
chr5_3 exon 7615611 7616270 7615611 ID=Msa0795650-mRNA-1:exon:3165;Parent=Msa0795650-mRNA-1
chr5_3 exon 7616546 7616843 7616546 ID=Msa0795650-mRNA-1:exon:3164;Parent=Msa0795650-mRNA-1
chr5_3 exon 7616980 7617344 7616980 ID=Msa0795650-mRNA-1:exon:3163;Parent=Msa0795650-mRNA-1
chr5_3 five_prime_UTR 7616980 7617344 7616980 ID=Msa0795650-mRNA-1:five_prime_utr;Parent=Msa0795650-mRNA-1
chr5_3 five_prime_UTR 7616546 7616843 7616546 ID=Msa0795650-mRNA-1:five_prime_utr;Parent=Msa0795650-mRNA-1
chr5_3 five_prime_UTR 7615611 7616270 7615611 ID=Msa0795650-mRNA-1:five_prime_utr;Parent=Msa0795650-mRNA-1
chr5_3 five_prime_UTR 7615378 7615444 7615378 ID=Msa0795650-mRNA-1:five_prime_utr;Parent=Msa0795650-mRNA-1
chr5_3 CDS 7615310 7615377 7615310 ID=Msa0795650-mRNA-1:cds;Parent=Msa0795650-mRNA-1
chr5_3 CDS 7614339 7615230 7614339 ID=Msa0795650-mRNA-1:cds;Parent=Msa0795650-mRNA-1
chr5_3 three_prime_UTR 7614247 7614338 7614247 ID=Msa0795650-mRNA-1:three_prime_utr;Parent=Msa0795650-mRNA-1
Gene Sequence

>Msa0795650

ATGTTTCCTCTGGCGTGGATTTTAGAATATCTTTACTTGTTTTACTTGTTCCTAATGGACAATGCAAGGTTTAAAGTGAAGCATTTTCCAAATGGCGATGTCTACATTGGTTTTGCCAAGGGAAAACGTATGCATGGCAAGGGAAGGTACACATGGTCAAATGGAACAATATACCAGGGTGACTGGGTTGATGGAAATAAGACAGGGAAAGGGCGGATGATATATCCATCAGGAGCAAGTTTTGAGGGTGGATTCTTTAGGAATTCCCGTCATGGTCACGGCACCCTTACAAAATCCAATGGGGATGTCTACATTGGTAACTTCGAGAATGATCTTTTCCACGGCAAGGGAAAGTACACATGGTCAGATGGAGAAATATACGAGGGTGATTGGGTTGATGGAAGTAGGACAGGGAAAGGACGGATCATATTTCCATCAGGAACAACTTTTGAGGGTGAAATCTCCGGGAATTCCCGTGATGGTCACGGCATCCTTACAAAATCCAACGGGGATATCTACATTGGTAACTTCAAGAGTGGTTTACCCCATGGCAAGGGAAAGTACACATGGTCAAATGGAACAATATATGAAGGTGATTGGGTTGATGGAAGCAGGGCAGGGAATGGACGGATCATATATCCATCAGGAACAACTTTTGAGGGTGAATTCTCTATGAATTCCTTCCATGGTCACGGCACCCATACAAATTCAAACGGGGATGTCTACATTGGTAACTTCAAGAGCGGTTTTTCCCATGGCAAGGGAAAGTTCACATGGTCAGATGGAACAATATATGAGGGTGATTGGGTTGATGGTAAAAGGAAAGGGAAAGGAAGAATCATATATCCATCAGGAGCAAGTTTTGAGGGCGAATTCTCTGGGAATTCCTTTCATGGTCACGGCATCCATACAAATTCAAATGGGGAAGTCTACATTGGTAAATTCAAGAGCGGTGTTTAA
Protein sequence

>Msa0795650

MFPLAWILEYLYLFYLFLMDNARFKVKHFPNGDVYIGFAKGKRMHGKGRYTWSNGTIYQGDWVDGNKTGKGRMIYPSGASFEGGFFRNSRHGHGTLTKSNGDVYIGNFENDLFHGKGKYTWSDGEIYEGDWVDGSRTGKGRIIFPSGTTFEGEISGNSRDGHGILTKSNGDIYIGNFKSGLPHGKGKYTWSNGTIYEGDWVDGSRAGNGRIIYPSGTTFEGEFSMNSFHGHGTHTNSNGDVYIGNFKSGFSHGKGKFTWSDGTIYEGDWVDGKRKGKGRIIYPSGASFEGEFSGNSFHGHGIHTNSNGEVYIGKFKSGV*