Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839090 | XP_003615868.1 | 95.398 | 565 | 12 | 1 | 1 | 551 | 1 | 565 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839090 | sp|B9DFS6|SNX2B_ARATH | 66.269 | 587 | 147 | 11 | 1 | 551 | 1 | 572 | 0.0 | 727 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839090 | G7JZQ0 | 95.398 | 565 | 12 | 1 | 1 | 551 | 1 | 565 | 0.0 | 1095 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0656810 | Msa0839090 | 0.801799 | 7.591769e-49 | -8.615850e-47 |
| Msa0839090 | Msa1181170 | -0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0839090 | Msa1242640 | 0.820318 | 7.306044e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839090 | MtrunA17_Chr5g0431661 | 95.398 | 565 | 12 | 1 | 1 | 551 | 1 | 565 | 0.0 | 1095 |
| Msa0839090 | MtrunA17_Chr5g0437691 | 61.609 | 547 | 151 | 10 | 21 | 551 | 13 | 516 | 0.0 | 631 |
| Msa0839090 | MtrunA17_Chr1g0178331 | 25.238 | 420 | 241 | 12 | 135 | 536 | 27 | 391 | 5.12e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839090 | AT5G07120.1 | 66.269 | 587 | 147 | 11 | 1 | 551 | 1 | 572 | 0.0 | 727 |
| Msa0839090 | AT5G07120.2 | 66.269 | 587 | 147 | 11 | 1 | 551 | 1 | 572 | 0.0 | 727 |
| Msa0839090 | AT5G58440.1 | 65.254 | 590 | 157 | 11 | 1 | 549 | 1 | 583 | 0.0 | 709 |
| Msa0839090 | AT5G07120.3 | 66.014 | 562 | 140 | 11 | 1 | 526 | 1 | 547 | 0.0 | 688 |
| Msa0839090 | AT5G06140.1 | 26.406 | 409 | 250 | 9 | 135 | 536 | 25 | 389 | 1.86e-27 | 115 |
Find 134 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGGCTTCATCTAAAATATT+TGG | 0.114952 | 5_4:-13804034 | Msa0839090:CDS |
| GCGTCTGCGTTAGGTGAATT+AGG | 0.169531 | 5_4:+13805691 | None:intergenic |
| GGATTTGTTGAGGTTGTTTA+AGG | 0.178547 | 5_4:-13805056 | Msa0839090:CDS |
| AGGACGAATTTACCGGATTT+TGG | 0.186804 | 5_4:-13805460 | Msa0839090:CDS |
| GGAGAGACGATGGGTGAATT+AGG | 0.187986 | 5_4:-13804523 | Msa0839090:CDS |
| GGCATCTTCAGTGGCTCTTA+TGG | 0.216954 | 5_4:+13803967 | None:intergenic |
| AGATGTGGCTTCGAGGGTTT+TGG | 0.234925 | 5_4:-13805164 | Msa0839090:CDS |
| CGGCTTCATCTAAAATATTT+GGG | 0.264556 | 5_4:-13804033 | Msa0839090:CDS |
| GAAAGGATTTGTAGTTAATC+AGG | 0.312278 | 5_4:-13800887 | Msa0839090:intron |
| GACGCTTTCTGATCGGTTAT+CGG | 0.318166 | 5_4:-13805395 | Msa0839090:CDS |
| GAGAATTACGGTTTCGAATC+CGG | 0.326585 | 5_4:-13805554 | Msa0839090:CDS |
| GGAGAAATATTTGAGGAGAT+TGG | 0.338535 | 5_4:-13805269 | Msa0839090:CDS |
| CGTCTGCGTTAGGTGAATTA+GGG | 0.338670 | 5_4:+13805692 | None:intergenic |
| TACGGTTTCGAATCCGGTTA+AGG | 0.354816 | 5_4:-13805548 | Msa0839090:CDS |
| TTCCGTGATATGAATTGCTT+TGG | 0.359645 | 5_4:+13800339 | None:intergenic |
| TGAGAATGAAGAAGCTGTTT+CGG | 0.360286 | 5_4:-13804473 | Msa0839090:CDS |
| TGTTAAAGCACAGCAAGATA+TGG | 0.372932 | 5_4:-13804545 | Msa0839090:CDS |
| GAATTCTCTTGCTCCTTAAC+CGG | 0.373957 | 5_4:+13805535 | None:intergenic |
| TAAGGAATTGAAGCAGTCTA+TGG | 0.378294 | 5_4:-13805038 | Msa0839090:CDS |
| TTCGGAGTATTTGAGAATTA+CGG | 0.384395 | 5_4:-13805566 | Msa0839090:CDS |
| GATACACTTCACGAATATCT+TGG | 0.384570 | 5_4:-13804169 | Msa0839090:CDS |
| TTCTCAGACCGTGAAGCATT+TGG | 0.400601 | 5_4:-13804368 | Msa0839090:intron |
| GAGAGACGATGGGTGAATTA+GGG | 0.402041 | 5_4:-13804522 | Msa0839090:CDS |
| CTGTGCTTTAACAAGTGATT+CGG | 0.402881 | 5_4:+13804555 | None:intergenic |
| AGCAGTCTATGGCGAATGAT+TGG | 0.406221 | 5_4:-13805027 | Msa0839090:CDS |
| TCCTAGTGAGGTTGTGCAAC+CGG | 0.409003 | 5_4:-13805092 | Msa0839090:CDS |
| GAGATCGGAGTCTTTGAATT+CGG | 0.414867 | 5_4:-13805584 | Msa0839090:CDS |
| GTGAAAATTGCGTCTGCGTT+AGG | 0.416563 | 5_4:+13805682 | None:intergenic |
| GATGTGTTTGGCTGGTTCAT+AGG | 0.418497 | 5_4:-13800505 | Msa0839090:three_prime_UTR |
| ACGAATTCGGTGTTCGAAGA+AGG | 0.428475 | 5_4:-13805432 | Msa0839090:CDS |
| AATTCGTTCCCTCCAAAATC+CGG | 0.433165 | 5_4:+13805448 | None:intergenic |
| ACAATACTCTTATCCGGCCT+TGG | 0.433366 | 5_4:+13805346 | None:intergenic |
| GAAGCTGCCGAAGCAGTTGA+TGG | 0.437498 | 5_4:-13805131 | Msa0839090:CDS |
| CTGAGAAAATTGCTAATGTC+TGG | 0.440599 | 5_4:-13800660 | Msa0839090:CDS |
| TAAGAGTATTGTGGAGAGTC+AGG | 0.446853 | 5_4:-13805335 | Msa0839090:CDS |
| TACGACGAGGACGAATTTAC+CGG | 0.447282 | 5_4:-13805467 | Msa0839090:CDS |
| TGGCGGATCATCCGATGATT+CGG | 0.457612 | 5_4:-13805249 | Msa0839090:CDS |
| ATTATATACCAAATGCTTCA+CGG | 0.459102 | 5_4:+13804360 | None:intergenic |
| TGCCAATGCAGGAAAACAAT+AGG | 0.461698 | 5_4:-13800963 | Msa0839090:intron |
| ATCGCCGAGCTTCGTTTCGC+CGG | 0.464931 | 5_4:-13805767 | Msa0839090:CDS |
| GCAGTCTATGGCGAATGATT+GGG | 0.464967 | 5_4:-13805026 | Msa0839090:CDS |
| TGAGCAGAGGAGGGTGGCAT+TGG | 0.472519 | 5_4:-13805290 | Msa0839090:CDS |
| AATAAATCAAAAGATGTGTT+TGG | 0.477791 | 5_4:-13800517 | Msa0839090:three_prime_UTR |
| AAGCTGCCGAAGCAGTTGAT+GGG | 0.478618 | 5_4:-13805130 | Msa0839090:CDS |
| CTCTCCACAATACTCTTATC+CGG | 0.481829 | 5_4:+13805340 | None:intergenic |
| AATCAAAAGATGTGTTTGGC+TGG | 0.485301 | 5_4:-13800513 | Msa0839090:three_prime_UTR |
| GTTTCTTGCAAAGAAAGAAA+AGG | 0.491401 | 5_4:-13804966 | Msa0839090:intron |
| AGGAGTTTGTTGAGCAGAGG+AGG | 0.499970 | 5_4:-13805300 | Msa0839090:CDS |
| GTTAAAGCACAGCAAGATAT+GGG | 0.501430 | 5_4:-13804544 | Msa0839090:CDS |
| AAATCCCTCCCTCCTTTCGC+CGG | 0.503007 | 5_4:+13805073 | None:intergenic |
| ATCAAGGACTCGGAAGTTAG+AGG | 0.505613 | 5_4:-13804002 | Msa0839090:CDS |
| GCCGAGCTTCGTTTCGCCGG+TGG | 0.512200 | 5_4:-13805764 | Msa0839090:CDS |
| CATCGTTTGGTTCTGAGAGA+GGG | 0.513972 | 5_4:+13805917 | None:intergenic |
| TCGGAAGTTAGAGGAGCTAC+AGG | 0.514954 | 5_4:-13803993 | Msa0839090:CDS |
| ACATTTACACATCATTCAAA+AGG | 0.515257 | 5_4:-13800454 | Msa0839090:three_prime_UTR |
| TCATCACTCTTCCGAATCAT+CGG | 0.517181 | 5_4:+13805238 | None:intergenic |
| AAGGCTTGATAGAGAGAGGC+AGG | 0.522653 | 5_4:-13800929 | Msa0839090:CDS |
| TCAAGGGAAGCTTCCGTTGG+TGG | 0.523935 | 5_4:-13805194 | Msa0839090:CDS |
| AAGGAGGGAGGGATTTGTTG+AGG | 0.525059 | 5_4:-13805066 | Msa0839090:CDS |
| GACTTCTTAAACATGTTGAA+AGG | 0.525181 | 5_4:-13800904 | Msa0839090:CDS |
| AAATAAATTCATTCGTCAAG+TGG | 0.530410 | 5_4:+13800300 | None:intergenic |
| AATTCGAATTCGATTGTGCC+TGG | 0.532154 | 5_4:-13805517 | Msa0839090:CDS |
| TTCTAAGCCGCTTGTTGTCG+AGG | 0.533178 | 5_4:-13804999 | Msa0839090:CDS |
| GGAAGATGATTCACCGTCGA+AGG | 0.533736 | 5_4:+13805657 | None:intergenic |
| ATACTCTTATCCGGCCTTGG+CGG | 0.537593 | 5_4:+13805349 | None:intergenic |
| GCTTGTTGTCGAGGAAGATA+AGG | 0.541787 | 5_4:-13804990 | Msa0839090:CDS |
| CAGAGAATATGAGCGGATCA+AGG | 0.542532 | 5_4:-13803930 | Msa0839090:intron |
| GTACGACAGATGTGGCTTCG+AGG | 0.542546 | 5_4:-13805171 | Msa0839090:CDS |
| GAATACAGACATTCTGAGAA+TGG | 0.542825 | 5_4:+13800545 | None:intergenic |
| TACGACAGATGTGGCTTCGA+GGG | 0.544483 | 5_4:-13805170 | Msa0839090:CDS |
| TGACTCTTGCATCTTTCACA+AGG | 0.545605 | 5_4:-13800399 | Msa0839090:three_prime_UTR |
| GAGTCAGGTGATGCAAAAGC+AGG | 0.545661 | 5_4:-13805320 | Msa0839090:CDS |
| AGCAGGAGTTTGTTGAGCAG+AGG | 0.547480 | 5_4:-13805303 | Msa0839090:CDS |
| GCAAGATATGGGAGAGACGA+TGG | 0.548370 | 5_4:-13804533 | Msa0839090:CDS |
| TCGAAGAAGGTTTAAAGATG+TGG | 0.549228 | 5_4:-13805419 | Msa0839090:CDS |
| TTATCTTCCTCGACAACAAG+CGG | 0.550409 | 5_4:+13804992 | None:intergenic |
| TGTCGGAGTATTAACACCGT+TGG | 0.556277 | 5_4:+13805636 | None:intergenic |
| TGAAATTCGCGGTGGTGCTG+CGG | 0.556521 | 5_4:+13805718 | None:intergenic |
| CAAGGGAAGCTTCCGTTGGT+GGG | 0.556985 | 5_4:-13805193 | Msa0839090:CDS |
| GTTGTGCAACCGGCGAAAGG+AGG | 0.561996 | 5_4:-13805082 | Msa0839090:CDS |
| TCATCGTTTGGTTCTGAGAG+AGG | 0.563535 | 5_4:+13805916 | None:intergenic |
| CAGTCTATGGCGAATGATTG+GGG | 0.564990 | 5_4:-13805025 | Msa0839090:CDS |
| TTGTGCAACCGGCGAAAGGA+GGG | 0.566253 | 5_4:-13805081 | Msa0839090:CDS |
| TGGCATTGGAGAAATATTTG+AGG | 0.566546 | 5_4:-13805276 | Msa0839090:CDS |
| GGCTTCATCTAAAATATTTG+GGG | 0.566719 | 5_4:-13804032 | Msa0839090:CDS |
| CGGTTATCGGAGGCGTATCG+CGG | 0.566733 | 5_4:-13805382 | Msa0839090:CDS |
| GAAATATTTGAGGAGATTGG+CGG | 0.569501 | 5_4:-13805266 | Msa0839090:CDS |
| GAGTGTTATTGCTCCTAGTG+AGG | 0.570189 | 5_4:-13805104 | Msa0839090:CDS |
| ACAATAGGAGTGAACTTGAA+AGG | 0.570539 | 5_4:-13800948 | Msa0839090:CDS |
| TCCACCGGCGAAACGAAGCT+CGG | 0.571673 | 5_4:+13805763 | None:intergenic |
| GACGATGGGTGAATTAGGGT+TGG | 0.575302 | 5_4:-13804518 | Msa0839090:CDS |
| GACCAAAGCAATTCATATCA+CGG | 0.576017 | 5_4:-13800341 | Msa0839090:three_prime_UTR |
| ATGTGGTGACGCTTTCTGAT+CGG | 0.577142 | 5_4:-13805402 | Msa0839090:CDS |
| AATTCGCGGTGGTGCTGCGG+CGG | 0.577596 | 5_4:+13805721 | None:intergenic |
| GCCGGTTGCACAACCTCACT+AGG | 0.580249 | 5_4:+13805091 | None:intergenic |
| TGCAACCGGCGAAAGGAGGG+AGG | 0.580386 | 5_4:-13805078 | Msa0839090:CDS |
| GTTTGTTGAGCAGAGGAGGG+TGG | 0.580524 | 5_4:-13805296 | Msa0839090:CDS |
| GAGGTTGTGCAACCGGCGAA+AGG | 0.581457 | 5_4:-13805085 | Msa0839090:CDS |
| GTAAATCATACTCTAACTAC+CGG | 0.585584 | 5_4:-13805843 | Msa0839090:CDS |
| AGCTCGGCGATGAGAGAGGA+TGG | 0.586188 | 5_4:+13805779 | None:intergenic |
| GGAGTTTGTTGAGCAGAGGA+GGG | 0.590410 | 5_4:-13805299 | Msa0839090:CDS |
| GGTTCAAGGGAAGCTTCCGT+TGG | 0.590903 | 5_4:-13805197 | Msa0839090:CDS |
| GTTGGTGGGTACGACAGATG+TGG | 0.594096 | 5_4:-13805179 | Msa0839090:CDS |
| ACGAAGCTCGGCGATGAGAG+AGG | 0.598027 | 5_4:+13805775 | None:intergenic |
| GGTTATCGGAGGCGTATCGC+GGG | 0.598439 | 5_4:-13805381 | Msa0839090:CDS |
| CAAGATATGGGAGAGACGAT+GGG | 0.599204 | 5_4:-13804532 | Msa0839090:CDS |
| GGGGTGACAAATCAAGGACT+CGG | 0.602420 | 5_4:-13804012 | Msa0839090:CDS |
| AGCTGCCGAAGCAGTTGATG+GGG | 0.602715 | 5_4:-13805129 | Msa0839090:CDS |
| AAAGTTGTTGAAGACACAAG+TGG | 0.605480 | 5_4:-13800634 | Msa0839090:CDS |
| TTGAAAGGCTTGATAGAGAG+AGG | 0.608463 | 5_4:-13800933 | Msa0839090:CDS |
| AGCTGTTTCGGAATCTCAGA+GGG | 0.618180 | 5_4:-13804461 | Msa0839090:CDS |
| ACACGAAGTTTCTCCGATGG+AGG | 0.620179 | 5_4:-13805616 | Msa0839090:CDS |
| TGCTGCGGCGGAGATAAAAG+TGG | 0.620718 | 5_4:+13805733 | None:intergenic |
| CGGCGGAGATAAAAGTGGAT+CGG | 0.629103 | 5_4:+13805738 | None:intergenic |
| AAAAGTGGATCGGAATCCAC+CGG | 0.629137 | 5_4:+13805748 | None:intergenic |
| CCGACACGAAGTTTCTCCGA+TGG | 0.630365 | 5_4:-13805619 | Msa0839090:CDS |
| ATTGTGAGAATCAGAGAGCG+TGG | 0.638181 | 5_4:+13805810 | None:intergenic |
| GTACGAGCTACTGACATGAA+AGG | 0.639142 | 5_4:-13804439 | Msa0839090:CDS |
| CGAAAATAACAACACCTCAG+AGG | 0.641680 | 5_4:-13805950 | Msa0839090:CDS |
| AGAGCGTGGACATCACGCTC+CGG | 0.645909 | 5_4:+13805824 | None:intergenic |
| AAGGCCGGATAAGAGTATTG+TGG | 0.649282 | 5_4:-13805344 | Msa0839090:CDS |
| GCAACCGGCGAAAGGAGGGA+GGG | 0.649738 | 5_4:-13805077 | Msa0839090:CDS |
| GACGGTGAATCATCTTCCAA+CGG | 0.649843 | 5_4:-13805652 | Msa0839090:CDS |
| ACATCTGTCGTACCCACCAA+CGG | 0.651618 | 5_4:+13805181 | None:intergenic |
| GCTTTCTGATCGGTTATCGG+AGG | 0.661776 | 5_4:-13805392 | Msa0839090:CDS |
| GCTGCCGAAGCAGTTGATGG+GGG | 0.662311 | 5_4:-13805128 | Msa0839090:CDS |
| AAGCTGTTTCGGAATCTCAG+AGG | 0.673178 | 5_4:-13804462 | Msa0839090:CDS |
| GCTTCATCTAAAATATTTGG+GGG | 0.680484 | 5_4:-13804031 | Msa0839090:CDS |
| GTAACATAACTATTACTACC+AGG | 0.682772 | 5_4:+13805499 | None:intergenic |
| CCATCGGAGAAACTTCGTGT+CGG | 0.686789 | 5_4:+13805619 | None:intergenic |
| TTGCAATCAGAGAATATGAG+CGG | 0.689296 | 5_4:-13803937 | Msa0839090:CDS |
| AGGGTGAAAATGTTCCTCTG+AGG | 0.716139 | 5_4:+13805936 | None:intergenic |
| TCTATGGCGAATGATTGGGG+TGG | 0.719791 | 5_4:-13805022 | Msa0839090:CDS |
| TTACGTATTTGATTACGACG+AGG | 0.754185 | 5_4:-13805480 | Msa0839090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGTTTTTTATTTTGATT+TGG | - | chr5_4:13802354-13802373 | Msa0839090:intron | 10.0% |
| !! | TTAAATTTACATGAAAAATT+AGG | + | chr5_4:13802793-13802812 | None:intergenic | 10.0% |
| !!! | ATCTATTTTAATGATATTTT+TGG | - | chr5_4:13802848-13802867 | Msa0839090:intron | 10.0% |
| !!! | AGTCAATTTTTATTAATTTT+TGG | - | chr5_4:13805488-13805507 | Msa0839090:CDS | 10.0% |
| !!! | ATTATTTTATTGATGTTATG+AGG | - | chr5_4:13801616-13801635 | Msa0839090:intron | 15.0% |
| !! | TTCATGTAAATTTAAGTATT+TGG | - | chr5_4:13802798-13802817 | Msa0839090:intron | 15.0% |
| !!! | TAAATTTAAGTATTTGGTTT+GGG | - | chr5_4:13802804-13802823 | Msa0839090:intron | 15.0% |
| !! | AAAAAATAATATACCACTAT+AGG | + | chr5_4:13803185-13803204 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGTTTGAAAACT+CGG | - | chr5_4:13803197-13803216 | Msa0839090:intron | 15.0% |
| !!! | ATTTTTTTTTTTTGACCAAT+AGG | - | chr5_4:13803596-13803615 | Msa0839090:intron | 15.0% |
| !! | ATATGAAAATATGAAAACTT+TGG | - | chr5_4:13804003-13804022 | Msa0839090:CDS | 15.0% |
| !!! | AGGACAAAATAATAAATTTT+TGG | - | chr5_4:13804427-13804446 | Msa0839090:CDS | 15.0% |
| !!! | ATGATACATCTTTAATATTT+TGG | + | chr5_4:13804632-13804651 | None:intergenic | 15.0% |
| !! | AATAAGCTAAAAACAGTTTA+TGG | + | chr5_4:13801455-13801474 | None:intergenic | 20.0% |
| !! | AACAAGAACAAATGTATAAT+TGG | + | chr5_4:13801921-13801940 | None:intergenic | 20.0% |
| !! | AATAGCAATCATATTTGTAA+AGG | + | chr5_4:13802552-13802571 | None:intergenic | 20.0% |
| !! | CTACAAAATACAAATACAAA+GGG | + | chr5_4:13802617-13802636 | None:intergenic | 20.0% |
| !! | TCTACAAAATACAAATACAA+AGG | + | chr5_4:13802618-13802637 | None:intergenic | 20.0% |
| !!! | ATTATTAGTCTTATTGTTTG+TGG | - | chr5_4:13802734-13802753 | Msa0839090:intron | 20.0% |
| !!! | TTATTAGTCTTATTGTTTGT+GGG | - | chr5_4:13802735-13802754 | Msa0839090:intron | 20.0% |
| !! | GTAAATTTAAGTATTTGGTT+TGG | - | chr5_4:13802803-13802822 | Msa0839090:intron | 20.0% |
| !!! | AAGTTAAGAATTCAAGTTTT+GGG | + | chr5_4:13802914-13802933 | None:intergenic | 20.0% |
| !! | AATAACTGTAGTATACAATA+CGG | + | chr5_4:13803469-13803488 | None:intergenic | 20.0% |
| !! | TAAGAATAAAAATACCAGAA+CGG | + | chr5_4:13803869-13803888 | None:intergenic | 20.0% |
| !!! | TAAAAATGAGTTCTAGATTT+AGG | - | chr5_4:13804347-13804366 | Msa0839090:intron | 20.0% |
| !!! | AAAAATGAGTTCTAGATTTA+GGG | - | chr5_4:13804348-13804367 | Msa0839090:intron | 20.0% |
| !! | TGATATTAATGTAAATGAGA+TGG | - | chr5_4:13804461-13804480 | Msa0839090:CDS | 20.0% |
| !!! | ATGTTTTAAAATGTTATACC+TGG | - | chr5_4:13805145-13805164 | Msa0839090:CDS | 20.0% |
| !! | TCTGATTAACTTAAGTTAAT+AGG | - | chr5_4:13805560-13805579 | Msa0839090:CDS | 20.0% |
| !! | ATTAACTTAAGTTAATAGGT+GGG | - | chr5_4:13805564-13805583 | Msa0839090:CDS | 20.0% |
| !! | AATAAATCAAAAGATGTGTT+TGG | - | chr5_4:13805735-13805754 | Msa0839090:CDS | 20.0% |
| !! | AGATTTTCTAATTCATCGTT+TGG | + | chr5_4:13800351-13800370 | None:intergenic | 25.0% |
| ! | ATTATATACCAAATGCTTCA+CGG | + | chr5_4:13801895-13801914 | None:intergenic | 25.0% |
| ! | TGCACTTTCCTTAATAATAA+CGG | - | chr5_4:13802006-13802025 | Msa0839090:intron | 25.0% |
| ! | CAACAATTAAACCTATTTAG+TGG | + | chr5_4:13802037-13802056 | None:intergenic | 25.0% |
| !! | TTTTAAATCGCAAACTATTC+AGG | + | chr5_4:13802421-13802440 | None:intergenic | 25.0% |
| !! | GAATAGTTTGCGATTTAAAA+TGG | - | chr5_4:13802421-13802440 | Msa0839090:intron | 25.0% |
| ! | TTAAGATGTTAGAGTTGTTA+GGG | - | chr5_4:13802710-13802729 | Msa0839090:intron | 25.0% |
| !!! | CAAGTTAAGAATTCAAGTTT+TGG | + | chr5_4:13802915-13802934 | None:intergenic | 25.0% |
| ! | CAAAACTTGAATTCTTAACT+TGG | - | chr5_4:13802913-13802932 | Msa0839090:intron | 25.0% |
| ! | ATGAACTCAAAAAAAGAGAA+AGG | + | chr5_4:13802957-13802976 | None:intergenic | 25.0% |
| ! | GAGAGAATAATATAGGAATT+AGG | + | chr5_4:13803007-13803026 | None:intergenic | 25.0% |
| ! | AGAGAATAATACATGAATAG+CGG | + | chr5_4:13803029-13803048 | None:intergenic | 25.0% |
| ! | TTGCATGATAACTTAAAGTT+TGG | - | chr5_4:13803059-13803078 | Msa0839090:intron | 25.0% |
| ! | TGCATGATAACTTAAAGTTT+GGG | - | chr5_4:13803060-13803079 | Msa0839090:intron | 25.0% |
| !! | TATAGAGCTATGCTTTAAAT+GGG | + | chr5_4:13803283-13803302 | None:intergenic | 25.0% |
| !! | ATATAGAGCTATGCTTTAAA+TGG | + | chr5_4:13803284-13803303 | None:intergenic | 25.0% |
| !! | ATTTAAAGCATAGCTCTATA+TGG | - | chr5_4:13803283-13803302 | Msa0839090:intron | 25.0% |
| ! | TATACTAGTGAGTAGTAATT+AGG | + | chr5_4:13803554-13803573 | None:intergenic | 25.0% |
| ! | TACTACTCACTAGTATAAAT+TGG | - | chr5_4:13803557-13803576 | Msa0839090:intron | 25.0% |
| !! | CTAGTATAAATTGGAGTTTT+AGG | - | chr5_4:13803566-13803585 | Msa0839090:intron | 25.0% |
| !!! | TAAATTGGAGTTTTAGGTTT+TGG | - | chr5_4:13803572-13803591 | Msa0839090:intron | 25.0% |
| !!! | AAATTGGAGTTTTAGGTTTT+GGG | - | chr5_4:13803573-13803592 | Msa0839090:intron | 25.0% |
| !!! | TTTTTTTGACCAATAGGTTT+TGG | - | chr5_4:13803602-13803621 | Msa0839090:intron | 25.0% |
| !!! | TTTTTTGACCAATAGGTTTT+GGG | - | chr5_4:13803603-13803622 | Msa0839090:intron | 25.0% |
| ! | AATTAAATCCCAAAACCTAT+TGG | + | chr5_4:13803614-13803633 | None:intergenic | 25.0% |
| ! | ATTCAATGTGCTGAATTTAT+AGG | - | chr5_4:13803635-13803654 | Msa0839090:intron | 25.0% |
| ! | TTCAATGTGCTGAATTTATA+GGG | - | chr5_4:13803636-13803655 | Msa0839090:intron | 25.0% |
| ! | ATGATGAACGAACTATATAA+CGG | + | chr5_4:13803709-13803728 | None:intergenic | 25.0% |
| ! | TTCAAATTTCAAATCCAAAC+AGG | + | chr5_4:13803921-13803940 | None:intergenic | 25.0% |
| ! | TTATATGGTCTATATTGTCA+AGG | - | chr5_4:13803980-13803999 | Msa0839090:CDS | 25.0% |
| ! | GTATGATAACTTAAAGTCAA+AGG | - | chr5_4:13804079-13804098 | Msa0839090:CDS | 25.0% |
| ! | GCTTGTATATTACAGTTATT+AGG | - | chr5_4:13804268-13804287 | Msa0839090:intron | 25.0% |
| !! | ATTACAGTTATTAGGTTGTT+AGG | - | chr5_4:13804276-13804295 | Msa0839090:intron | 25.0% |
| ! | TTGAACTAATTACTAGTTAG+TGG | - | chr5_4:13804302-13804321 | Msa0839090:intron | 25.0% |
| ! | TATACCAGTAACTAGTAATA+AGG | + | chr5_4:13804329-13804348 | None:intergenic | 25.0% |
| ! | TATTAATGTAAATGAGATGG+TGG | - | chr5_4:13804464-13804483 | Msa0839090:CDS | 25.0% |
| !!! | AATTTTAATGCAAGAGAATC+AGG | + | chr5_4:13804720-13804739 | None:intergenic | 25.0% |
| ! | TTTATTTGTAAAATCCCATC+TGG | - | chr5_4:13804783-13804802 | Msa0839090:intron | 25.0% |
| ! | AAATACTGTATTCAACAAAC+TGG | - | chr5_4:13804867-13804886 | Msa0839090:intron | 25.0% |
| ! | CTATGTAATATGATTTCAGT+GGG | - | chr5_4:13804890-13804909 | Msa0839090:intron | 25.0% |
| ! | AAACATCATCCATTAAAAGT+AGG | + | chr5_4:13805022-13805041 | None:intergenic | 25.0% |
| ! | AATTATAAGATGATGAAGTC+TGG | + | chr5_4:13805122-13805141 | None:intergenic | 25.0% |
| ! | TATAAATGGGTCTAATCTTA+TGG | - | chr5_4:13805443-13805462 | Msa0839090:CDS | 25.0% |
| ! | GATTAACTTAAGTTAATAGG+TGG | - | chr5_4:13805563-13805582 | Msa0839090:CDS | 25.0% |
| ! | TTAACTTAAGTTAATAGGTG+GGG | - | chr5_4:13805565-13805584 | Msa0839090:CDS | 25.0% |
| ! | ACATTTACACATCATTCAAA+AGG | - | chr5_4:13805798-13805817 | Msa0839090:CDS | 25.0% |
| ! | AAATAAATTCATTCGTCAAG+TGG | + | chr5_4:13805955-13805974 | None:intergenic | 25.0% |
| GTAAATCATACTCTAACTAC+CGG | - | chr5_4:13800409-13800428 | Msa0839090:three_prime_UTR | 30.0% | |
| !!! | AATTAGGGTTTTGAAATTCG+CGG | + | chr5_4:13800548-13800567 | None:intergenic | 30.0% |
| ! | TTCGGAGTATTTGAGAATTA+CGG | - | chr5_4:13800686-13800705 | Msa0839090:intron | 30.0% |
| GTAACATAACTATTACTACC+AGG | + | chr5_4:13800756-13800775 | None:intergenic | 30.0% | |
| GTTTCTTGCAAAGAAAGAAA+AGG | - | chr5_4:13801286-13801305 | Msa0839090:intron | 30.0% | |
| GAACTTGAACAACAAATCAA+TGG | - | chr5_4:13801314-13801333 | Msa0839090:intron | 30.0% | |
| !! | CTTATTTTCATAAGCTCTGT+AGG | - | chr5_4:13801469-13801488 | Msa0839090:intron | 30.0% |
| TTATTGATGTTATGAGGATG+TGG | - | chr5_4:13801622-13801641 | Msa0839090:intron | 30.0% | |
| CAAATATATGTACCATAGCT+TGG | - | chr5_4:13801964-13801983 | Msa0839090:intron | 30.0% | |
| TGTAAAAATATGCCAAGCTA+TGG | + | chr5_4:13801979-13801998 | None:intergenic | 30.0% | |
| !! | AGCTTGGCATATTTTTACAA+AGG | - | chr5_4:13801980-13801999 | Msa0839090:intron | 30.0% |
| GCACTTTCCTTAATAATAAC+GGG | - | chr5_4:13802007-13802026 | Msa0839090:intron | 30.0% | |
| ! | TTTTCCATTTTATGCATAGC+AGG | - | chr5_4:13802061-13802080 | Msa0839090:intron | 30.0% |
| ! | CGGCTTCATCTAAAATATTT+GGG | - | chr5_4:13802219-13802238 | Msa0839090:intron | 30.0% |
| ! | GGCTTCATCTAAAATATTTG+GGG | - | chr5_4:13802220-13802239 | Msa0839090:intron | 30.0% |
| ! | GCTTCATCTAAAATATTTGG+GGG | - | chr5_4:13802221-13802240 | Msa0839090:intron | 30.0% |
| ! | TTCTCTGATTGCAACATTTT+TGG | + | chr5_4:13802309-13802328 | None:intergenic | 30.0% |
| GACACAAAATACAACTTTGA+TGG | + | chr5_4:13802500-13802519 | None:intergenic | 30.0% | |
| GATAACAAATGACCAATCAT+GGG | + | chr5_4:13802530-13802549 | None:intergenic | 30.0% | |
| GTTAAGATGTTAGAGTTGTT+AGG | - | chr5_4:13802709-13802728 | Msa0839090:intron | 30.0% | |
| ! | TTAACTTGGTATCATTTACC+AGG | - | chr5_4:13802927-13802946 | Msa0839090:intron | 30.0% |
| TAACTTGGTATCATTTACCA+GGG | - | chr5_4:13802928-13802947 | Msa0839090:intron | 30.0% | |
| ! | AATAGCGGAGAGAATAATAT+AGG | + | chr5_4:13803014-13803033 | None:intergenic | 30.0% |
| AGAAAACATTTCATCTGCTT+GGG | - | chr5_4:13803133-13803152 | Msa0839090:intron | 30.0% | |
| ATTAGATTAGGTTCCTATAG+TGG | - | chr5_4:13803169-13803188 | Msa0839090:intron | 30.0% | |
| !! | GTCATTTTGTTAGTAAGCTT+TGG | - | chr5_4:13803490-13803509 | Msa0839090:intron | 30.0% |
| AAACAAAAAAGAGAGAGAGA+AGG | + | chr5_4:13803766-13803785 | None:intergenic | 30.0% | |
| ! | GACTGTGGAGTAATTTTATA+TGG | - | chr5_4:13803965-13803984 | Msa0839090:CDS | 30.0% |
| AAAACTTTGGTCATCTGTAA+AGG | - | chr5_4:13804016-13804035 | Msa0839090:CDS | 30.0% | |
| TTGTAACAACTAAAGCTTAC+AGG | - | chr5_4:13804241-13804260 | Msa0839090:intron | 30.0% | |
| TGTAACAACTAAAGCTTACA+GGG | - | chr5_4:13804242-13804261 | Msa0839090:intron | 30.0% | |
| TACGACTCAAGTATTCTATA+AGG | + | chr5_4:13804518-13804537 | None:intergenic | 30.0% | |
| AGCATCTTAGATTATCTCTA+AGG | + | chr5_4:13804588-13804607 | None:intergenic | 30.0% | |
| TTAGTCGAAAATCTTCCATT+AGG | - | chr5_4:13804806-13804825 | Msa0839090:intron | 30.0% | |
| ! | TGATAATGTTTCAGAGTAGT+AGG | + | chr5_4:13804836-13804855 | None:intergenic | 30.0% |
| GCTATGTAATATGATTTCAG+TGG | - | chr5_4:13804889-13804908 | Msa0839090:intron | 30.0% | |
| TTCATTAAACAAAGCAACAG+AGG | + | chr5_4:13805260-13805279 | None:intergenic | 30.0% | |
| GACTTCTTAAACATGTTGAA+AGG | - | chr5_4:13805348-13805367 | Msa0839090:CDS | 30.0% | |
| GAAAGGATTTGTAGTTAATC+AGG | - | chr5_4:13805365-13805384 | Msa0839090:CDS | 30.0% | |
| !!! | CTCTGAGGTGTTGTTATTTT+CGG | + | chr5_4:13800304-13800323 | None:intergenic | 35.0% |
| TTACGTATTTGATTACGACG+AGG | - | chr5_4:13800772-13800791 | Msa0839090:intron | 35.0% | |
| TCGAAGAAGGTTTAAAGATG+TGG | - | chr5_4:13800833-13800852 | Msa0839090:intron | 35.0% | |
| ! | TGGCATTGGAGAAATATTTG+AGG | - | chr5_4:13800976-13800995 | Msa0839090:intron | 35.0% |
| GGAGAAATATTTGAGGAGAT+TGG | - | chr5_4:13800983-13801002 | Msa0839090:intron | 35.0% | |
| GAAATATTTGAGGAGATTGG+CGG | - | chr5_4:13800986-13801005 | Msa0839090:intron | 35.0% | |
| !! | TGAGTTTAGAGTGTTTTTGC+AGG | - | chr5_4:13801034-13801053 | Msa0839090:intron | 35.0% |
| !! | GGATTTGTTGAGGTTGTTTA+AGG | - | chr5_4:13801196-13801215 | Msa0839090:intron | 35.0% |
| TAAGGAATTGAAGCAGTCTA+TGG | - | chr5_4:13801214-13801233 | Msa0839090:intron | 35.0% | |
| TTCATAAGCTCTGTAGGTTT+AGG | - | chr5_4:13801475-13801494 | Msa0839090:intron | 35.0% | |
| TGACAAGCTATCAAACACAT+GGG | + | chr5_4:13801591-13801610 | None:intergenic | 35.0% | |
| CTGTGCTTTAACAAGTGATT+CGG | + | chr5_4:13801700-13801719 | None:intergenic | 35.0% | |
| TGTTAAAGCACAGCAAGATA+TGG | - | chr5_4:13801707-13801726 | Msa0839090:intron | 35.0% | |
| GTTAAAGCACAGCAAGATAT+GGG | - | chr5_4:13801708-13801727 | Msa0839090:intron | 35.0% | |
| TGAGAATGAAGAAGCTGTTT+CGG | - | chr5_4:13801779-13801798 | Msa0839090:intron | 35.0% | |
| TGGATTGCCCGTTATTATTA+AGG | + | chr5_4:13802017-13802036 | None:intergenic | 35.0% | |
| GTATCCTGCTATGCATAAAA+TGG | + | chr5_4:13802068-13802087 | None:intergenic | 35.0% | |
| GATACACTTCACGAATATCT+TGG | - | chr5_4:13802083-13802102 | Msa0839090:intron | 35.0% | |
| ! | TTTTTCTGCTCTTGATTGCA+AGG | + | chr5_4:13802192-13802211 | None:intergenic | 35.0% |
| AAGAGCAGAAAAACTTGAAG+CGG | - | chr5_4:13802199-13802218 | Msa0839090:intron | 35.0% | |
| ! | GCGGCTTCATCTAAAATATT+TGG | - | chr5_4:13802218-13802237 | Msa0839090:intron | 35.0% |
| !!! | AACATTTTTGGCATCTTCAG+TGG | + | chr5_4:13802297-13802316 | None:intergenic | 35.0% |
| TTGCAATCAGAGAATATGAG+CGG | - | chr5_4:13802315-13802334 | Msa0839090:intron | 35.0% | |
| GGATAACAAATGACCAATCA+TGG | + | chr5_4:13802531-13802550 | None:intergenic | 35.0% | |
| TCAATGTAGATGCATATAGC+AGG | + | chr5_4:13802674-13802693 | None:intergenic | 35.0% | |
| !!! | AGAATTCAAGTTTTGGGACA+GGG | + | chr5_4:13802908-13802927 | None:intergenic | 35.0% |
| !!! | AAGAATTCAAGTTTTGGGAC+AGG | + | chr5_4:13802909-13802928 | None:intergenic | 35.0% |
| AGTTATCATGCAATCAACAG+AGG | + | chr5_4:13803052-13803071 | None:intergenic | 35.0% | |
| TCTTCAACCTTTCACTTCAA+AGG | + | chr5_4:13803109-13803128 | None:intergenic | 35.0% | |
| ! | CAAGCAGATGAAATGTTTTC+TGG | + | chr5_4:13803134-13803153 | None:intergenic | 35.0% |
| CAGAAAACATTTCATCTGCT+TGG | - | chr5_4:13803132-13803151 | Msa0839090:intron | 35.0% | |
| ! | TGTGTGTGGAGTATTAGATT+AGG | - | chr5_4:13803157-13803176 | Msa0839090:intron | 35.0% |
| AAAACCATAGGTACCCATTA+GGG | + | chr5_4:13803402-13803421 | None:intergenic | 35.0% | |
| TAAAACCATAGGTACCCATT+AGG | + | chr5_4:13803403-13803422 | None:intergenic | 35.0% | |
| CATGAGACAGATAAAACCAT+AGG | + | chr5_4:13803414-13803433 | None:intergenic | 35.0% | |
| TTATCTGTCTCATGTTTGCA+AGG | - | chr5_4:13803420-13803439 | Msa0839090:intron | 35.0% | |
| !! | AATTGATTTCCCTCCCTTTT+TGG | - | chr5_4:13803733-13803752 | Msa0839090:intron | 35.0% |
| TAGATGACTTTGTTCCAACT+TGG | - | chr5_4:13803785-13803804 | Msa0839090:intron | 35.0% | |
| AGATGACTTTGTTCCAACTT+GGG | - | chr5_4:13803786-13803805 | Msa0839090:intron | 35.0% | |
| AATAACCAGAACACTGAGTA+AGG | + | chr5_4:13804043-13804062 | None:intergenic | 35.0% | |
| ! | TACTCAGTGTTCTGGTTATT+TGG | - | chr5_4:13804043-13804062 | Msa0839090:CDS | 35.0% |
| ! | TGTTCTGGTTATTTGGTTAG+AGG | - | chr5_4:13804050-13804069 | Msa0839090:CDS | 35.0% |
| CGAGTAGATGAAATGGTTTA+TGG | + | chr5_4:13804107-13804126 | None:intergenic | 35.0% | |
| GTAACAACTAAAGCTTACAG+GGG | - | chr5_4:13804243-13804262 | Msa0839090:intron | 35.0% | |
| TGGACCTTATTACTAGTTAC+TGG | - | chr5_4:13804322-13804341 | Msa0839090:intron | 35.0% | |
| ! | AGATTTTCGACTAACCAGAT+GGG | + | chr5_4:13804800-13804819 | None:intergenic | 35.0% |
| ! | AAGATTTTCGACTAACCAGA+TGG | + | chr5_4:13804801-13804820 | None:intergenic | 35.0% |
| AGAGTAGTAGGATTTCCTAA+TGG | + | chr5_4:13804824-13804843 | None:intergenic | 35.0% | |
| ! | GTTTAGTCTTTCATGCATTC+TGG | - | chr5_4:13805086-13805105 | Msa0839090:CDS | 35.0% |
| !! | TCTTTCATGCATTCTGGTTT+GGG | - | chr5_4:13805092-13805111 | Msa0839090:CDS | 35.0% |
| AATGTTATACCTGGCATTTC+TGG | - | chr5_4:13805154-13805173 | Msa0839090:CDS | 35.0% | |
| ACAGAGGAAATAGACAAGAA+GGG | + | chr5_4:13805244-13805263 | None:intergenic | 35.0% | |
| AACAGAGGAAATAGACAAGA+AGG | + | chr5_4:13805245-13805264 | None:intergenic | 35.0% | |
| ACAATAGGAGTGAACTTGAA+AGG | - | chr5_4:13805304-13805323 | Msa0839090:CDS | 35.0% | |
| TGTGTTCATCGCTGTATAAA+TGG | - | chr5_4:13805429-13805448 | Msa0839090:CDS | 35.0% | |
| GTGTTCATCGCTGTATAAAT+GGG | - | chr5_4:13805430-13805449 | Msa0839090:CDS | 35.0% | |
| CTGAGAAAATTGCTAATGTC+TGG | - | chr5_4:13805592-13805611 | Msa0839090:CDS | 35.0% | |
| AAAGTTGTTGAAGACACAAG+TGG | - | chr5_4:13805618-13805637 | Msa0839090:CDS | 35.0% | |
| ! | GAATACAGACATTCTGAGAA+TGG | + | chr5_4:13805710-13805729 | None:intergenic | 35.0% |
| AATCAAAAGATGTGTTTGGC+TGG | - | chr5_4:13805739-13805758 | Msa0839090:CDS | 35.0% | |
| GACCAAAGCAATTCATATCA+CGG | - | chr5_4:13805911-13805930 | Msa0839090:CDS | 35.0% | |
| TTCCGTGATATGAATTGCTT+TGG | + | chr5_4:13805916-13805935 | None:intergenic | 35.0% | |
| CGAAAATAACAACACCTCAG+AGG | - | chr5_4:13800302-13800321 | Msa0839090:three_prime_UTR | 40.0% | |
| ! | GCAATTTTCACTTCCTTCGA+CGG | - | chr5_4:13800582-13800601 | Msa0839090:three_prime_UTR | 40.0% |
| TCTCGAAAAAACTCCTCCAT+CGG | + | chr5_4:13800652-13800671 | None:intergenic | 40.0% | |
| !!! | TGGAGGAGTTTTTTCGAGAT+CGG | - | chr5_4:13800653-13800672 | Msa0839090:CDS | 40.0% |
| GAGATCGGAGTCTTTGAATT+CGG | - | chr5_4:13800668-13800687 | Msa0839090:CDS | 40.0% | |
| GAGAATTACGGTTTCGAATC+CGG | - | chr5_4:13800698-13800717 | Msa0839090:intron | 40.0% | |
| GAATTCTCTTGCTCCTTAAC+CGG | + | chr5_4:13800720-13800739 | None:intergenic | 40.0% | |
| AATTCGAATTCGATTGTGCC+TGG | - | chr5_4:13800735-13800754 | Msa0839090:intron | 40.0% | |
| ! | AGGACGAATTTACCGGATTT+TGG | - | chr5_4:13800792-13800811 | Msa0839090:intron | 40.0% |
| ! | ACGAATTTACCGGATTTTGG+AGG | - | chr5_4:13800795-13800814 | Msa0839090:intron | 40.0% |
| ! | CGAATTTACCGGATTTTGGA+GGG | - | chr5_4:13800796-13800815 | Msa0839090:intron | 40.0% |
| AATTCGTTCCCTCCAAAATC+CGG | + | chr5_4:13800807-13800826 | None:intergenic | 40.0% | |
| !! | GATTTTGGAGGGAACGAATT+CGG | - | chr5_4:13800807-13800826 | Msa0839090:intron | 40.0% |
| CTCTCCACAATACTCTTATC+CGG | + | chr5_4:13800915-13800934 | None:intergenic | 40.0% | |
| !! | TAAGAGTATTGTGGAGAGTC+AGG | - | chr5_4:13800917-13800936 | Msa0839090:CDS | 40.0% |
| TCATCACTCTTCCGAATCAT+CGG | + | chr5_4:13801017-13801036 | None:intergenic | 40.0% | |
| !! | AGAGTGTTTTTGCAGGTTCA+AGG | - | chr5_4:13801041-13801060 | Msa0839090:intron | 40.0% |
| !! | GAGTGTTTTTGCAGGTTCAA+GGG | - | chr5_4:13801042-13801061 | Msa0839090:intron | 40.0% |
| TTATCTTCCTCGACAACAAG+CGG | + | chr5_4:13801263-13801282 | None:intergenic | 40.0% | |
| TTTATACCTGCGAGACTGTT+TGG | - | chr5_4:13801399-13801418 | Msa0839090:intron | 40.0% | |
| TTATACCTGCGAGACTGTTT+GGG | - | chr5_4:13801400-13801419 | Msa0839090:intron | 40.0% | |
| GTGACAAGCTATCAAACACA+TGG | + | chr5_4:13801592-13801611 | None:intergenic | 40.0% | |
| ! | TAACGGGCAATCCACTAAAT+AGG | - | chr5_4:13802023-13802042 | Msa0839090:intron | 40.0% |
| TATTTGGGGGTGACAAATCA+AGG | - | chr5_4:13802234-13802253 | Msa0839090:intron | 40.0% | |
| ! | ATGACCAATCATGGGAGTAT+AGG | + | chr5_4:13802522-13802541 | None:intergenic | 40.0% |
| !! | AGTCTTATTGTTTGTGGGCT+TGG | - | chr5_4:13802740-13802759 | Msa0839090:intron | 40.0% |
| GACAGGGAAGAAAAGAGAAA+AGG | + | chr5_4:13802892-13802911 | None:intergenic | 40.0% | |
| AAAAAAGAGAAAGGAGACCC+TGG | + | chr5_4:13802948-13802967 | None:intergenic | 40.0% | |
| AAGTTTGGGAATCAGTTCAG+AGG | - | chr5_4:13803074-13803093 | Msa0839090:intron | 40.0% | |
| TCAACCTTTCACTTCAAAGG+TGG | + | chr5_4:13803106-13803125 | None:intergenic | 40.0% | |
| !! | TTGTTTGAAAACTCGGTGTC+CGG | - | chr5_4:13803204-13803223 | Msa0839090:intron | 40.0% |
| ATCGGACTCATCAGATTAGT+CGG | + | chr5_4:13803238-13803257 | None:intergenic | 40.0% | |
| TGGATTTAGCCCACTGAAAT+TGG | - | chr5_4:13803303-13803322 | Msa0839090:intron | 40.0% | |
| TTTATAGGGTCCAGACCTTT+AGG | - | chr5_4:13803650-13803669 | Msa0839090:intron | 40.0% | |
| AACTAGAGCAAATCCCAAGT+TGG | + | chr5_4:13803802-13803821 | None:intergenic | 40.0% | |
| TCTGGTTATTTGGTTAGAGG+TGG | - | chr5_4:13804053-13804072 | Msa0839090:CDS | 40.0% | |
| CTGGTTATTTGGTTAGAGGT+GGG | - | chr5_4:13804054-13804073 | Msa0839090:CDS | 40.0% | |
| GAGATAGAACCCAAGATTTG+TGG | - | chr5_4:13804141-13804160 | Msa0839090:CDS | 40.0% | |
| AACCCAAGATTTGTGGTTCA+GGG | - | chr5_4:13804148-13804167 | Msa0839090:CDS | 40.0% | |
| TGTTATCTGCTCATGTTTGC+TGG | - | chr5_4:13804211-13804230 | Msa0839090:intron | 40.0% | |
| ! | GTTATAGCGTTGAGACGTTT+AGG | - | chr5_4:13804395-13804414 | Msa0839090:CDS | 40.0% |
| GTTGAGACGTTTAGGTATAG+AGG | - | chr5_4:13804403-13804422 | Msa0839090:CDS | 40.0% | |
| CAAGAGAATCAGGAAAAGAG+GGG | + | chr5_4:13804710-13804729 | None:intergenic | 40.0% | |
| GCAAGAGAATCAGGAAAAGA+GGG | + | chr5_4:13804711-13804730 | None:intergenic | 40.0% | |
| TGCAAGAGAATCAGGAAAAG+AGG | + | chr5_4:13804712-13804731 | None:intergenic | 40.0% | |
| TGCACTTCTTGTCTTCTGTT+CGG | - | chr5_4:13804989-13805008 | Msa0839090:CDS | 40.0% | |
| !! | GGTCAGGAACCTACTTTTAA+TGG | - | chr5_4:13805010-13805029 | Msa0839090:CDS | 40.0% |
| ! | GTCTTTCATGCATTCTGGTT+TGG | - | chr5_4:13805091-13805110 | Msa0839090:CDS | 40.0% |
| AAACATCTACCAGAAATGCC+AGG | + | chr5_4:13805166-13805185 | None:intergenic | 40.0% | |
| !! | TGGCATTTCTGGTAGATGTT+TGG | - | chr5_4:13805165-13805184 | Msa0839090:CDS | 40.0% |
| CAGAGGAAATAGACAAGAAG+GGG | + | chr5_4:13805243-13805262 | None:intergenic | 40.0% | |
| ! | CTCCTATTGTTTTCCTGCAT+TGG | + | chr5_4:13805294-13805313 | None:intergenic | 40.0% |
| TTGAAAGGCTTGATAGAGAG+AGG | - | chr5_4:13805319-13805338 | Msa0839090:CDS | 40.0% | |
| TGACTCTTGCATCTTTCACA+AGG | - | chr5_4:13805853-13805872 | Msa0839090:CDS | 40.0% | |
| AGGGTGAAAATGTTCCTCTG+AGG | + | chr5_4:13800319-13800338 | None:intergenic | 45.0% | |
| !! | CATCGTTTGGTTCTGAGAGA+GGG | + | chr5_4:13800338-13800357 | None:intergenic | 45.0% |
| !! | TCATCGTTTGGTTCTGAGAG+AGG | + | chr5_4:13800339-13800358 | None:intergenic | 45.0% |
| ATTGTGAGAATCAGAGAGCG+TGG | + | chr5_4:13800445-13800464 | None:intergenic | 45.0% | |
| AAAAGTGGATCGGAATCCAC+CGG | + | chr5_4:13800507-13800526 | None:intergenic | 45.0% | |
| !!! | TAGGGTTTTGAAATTCGCGG+TGG | + | chr5_4:13800545-13800564 | None:intergenic | 45.0% |
| CGTCTGCGTTAGGTGAATTA+GGG | + | chr5_4:13800563-13800582 | None:intergenic | 45.0% | |
| GTGAAAATTGCGTCTGCGTT+AGG | + | chr5_4:13800573-13800592 | None:intergenic | 45.0% | |
| GACGGTGAATCATCTTCCAA+CGG | - | chr5_4:13800600-13800619 | Msa0839090:exon | 45.0% | |
| ! | TGTCGGAGTATTAACACCGT+TGG | + | chr5_4:13800619-13800638 | None:intergenic | 45.0% |
| TACGGTTTCGAATCCGGTTA+AGG | - | chr5_4:13800704-13800723 | Msa0839090:intron | 45.0% | |
| TACGACGAGGACGAATTTAC+CGG | - | chr5_4:13800785-13800804 | Msa0839090:intron | 45.0% | |
| !! | ACGAATTCGGTGTTCGAAGA+AGG | - | chr5_4:13800820-13800839 | Msa0839090:intron | 45.0% |
| ! | ATGTGGTGACGCTTTCTGAT+CGG | - | chr5_4:13800850-13800869 | Msa0839090:intron | 45.0% |
| GACGCTTTCTGATCGGTTAT+CGG | - | chr5_4:13800857-13800876 | Msa0839090:intron | 45.0% | |
| !!! | GTTTTTTATACCGCCAAGGC+CGG | - | chr5_4:13800893-13800912 | Msa0839090:CDS | 45.0% |
| ACAATACTCTTATCCGGCCT+TGG | + | chr5_4:13800909-13800928 | None:intergenic | 45.0% | |
| !! | AAGGCCGGATAAGAGTATTG+TGG | - | chr5_4:13800908-13800927 | Msa0839090:CDS | 45.0% |
| ! | GAGTGTTATTGCTCCTAGTG+AGG | - | chr5_4:13801148-13801167 | Msa0839090:intron | 45.0% |
| AGCAGTCTATGGCGAATGAT+TGG | - | chr5_4:13801225-13801244 | Msa0839090:intron | 45.0% | |
| GCAGTCTATGGCGAATGATT+GGG | - | chr5_4:13801226-13801245 | Msa0839090:intron | 45.0% | |
| CAGTCTATGGCGAATGATTG+GGG | - | chr5_4:13801227-13801246 | Msa0839090:intron | 45.0% | |
| !! | GCTTGTTGTCGAGGAAGATA+AGG | - | chr5_4:13801262-13801281 | Msa0839090:intron | 45.0% |
| AATCAATGGTGCTTCTCAGC+AGG | - | chr5_4:13801328-13801347 | Msa0839090:intron | 45.0% | |
| ! | ATCGCGAGACAATTTTGTGC+AGG | - | chr5_4:13801674-13801693 | Msa0839090:intron | 45.0% |
| CAAGATATGGGAGAGACGAT+GGG | - | chr5_4:13801720-13801739 | Msa0839090:intron | 45.0% | |
| GAGAGACGATGGGTGAATTA+GGG | - | chr5_4:13801730-13801749 | Msa0839090:intron | 45.0% | |
| ! | AAGCTGTTTCGGAATCTCAG+AGG | - | chr5_4:13801790-13801809 | Msa0839090:intron | 45.0% |
| ! | AGCTGTTTCGGAATCTCAGA+GGG | - | chr5_4:13801791-13801810 | Msa0839090:intron | 45.0% |
| GTACGAGCTACTGACATGAA+AGG | - | chr5_4:13801813-13801832 | Msa0839090:intron | 45.0% | |
| ! | TTCTCAGACCGTGAAGCATT+TGG | - | chr5_4:13801884-13801903 | Msa0839090:intron | 45.0% |
| ATCAAGGACTCGGAAGTTAG+AGG | - | chr5_4:13802250-13802269 | Msa0839090:intron | 45.0% | |
| CAGAGAATATGAGCGGATCA+AGG | - | chr5_4:13802322-13802341 | Msa0839090:intron | 45.0% | |
| ATATGAGCGGATCAAGGTAG+AGG | - | chr5_4:13802328-13802347 | Msa0839090:intron | 45.0% | |
| GTGTCCTATACTCCCATGAT+TGG | - | chr5_4:13802515-13802534 | Msa0839090:intron | 45.0% | |
| !! | ATGGCCACCTTTGAAGTGAA+AGG | - | chr5_4:13803099-13803118 | Msa0839090:intron | 45.0% |
| ! | CATCAGATTAGTCGGTCCTT+GGG | + | chr5_4:13803230-13803249 | None:intergenic | 45.0% |
| ! | TCATCAGATTAGTCGGTCCT+TGG | + | chr5_4:13803231-13803250 | None:intergenic | 45.0% |
| TGGCCTAAAGGTCTTGGTTT+GGG | + | chr5_4:13803378-13803397 | None:intergenic | 45.0% | |
| TTGGCCTAAAGGTCTTGGTT+TGG | + | chr5_4:13803379-13803398 | None:intergenic | 45.0% | |
| ACCTTTAGGCCAACCCTAAT+GGG | - | chr5_4:13803386-13803405 | Msa0839090:intron | 45.0% | |
| !! | TCCAGACCTTTAGGTGTTGA+GGG | - | chr5_4:13803659-13803678 | Msa0839090:intron | 45.0% |
| !! | ATGCTTCTGCCTAGCTTGTT+TGG | - | chr5_4:13803840-13803859 | Msa0839090:intron | 45.0% |
| ! | ACGTTGCTACTTGAAGACTG+TGG | - | chr5_4:13803943-13803962 | Msa0839090:CDS | 45.0% |
| ! | TACTTGAAGACTGTGGACTG+TGG | - | chr5_4:13803950-13803969 | Msa0839090:CDS | 45.0% |
| AAGGACCTTACTCAGTGTTC+TGG | - | chr5_4:13804035-13804054 | Msa0839090:CDS | 45.0% | |
| CACGTCACGAGTAGATGAAA+TGG | + | chr5_4:13804114-13804133 | None:intergenic | 45.0% | |
| GAACCCAAGATTTGTGGTTC+AGG | - | chr5_4:13804147-13804166 | Msa0839090:CDS | 45.0% | |
| ACCCAAGATTTGTGGTTCAG+GGG | - | chr5_4:13804149-13804168 | Msa0839090:CDS | 45.0% | |
| TACGAGGTTCCAAAGGTCTT+TGG | - | chr5_4:13804175-13804194 | Msa0839090:intron | 45.0% | |
| ! | CCTTTCTAGCCAAAGACCTT+TGG | + | chr5_4:13804187-13804206 | None:intergenic | 45.0% |
| CCAAAGGTCTTTGGCTAGAA+AGG | - | chr5_4:13804184-13804203 | Msa0839090:intron | 45.0% | |
| ACAACTAAAGCTTACAGGGG+AGG | - | chr5_4:13804246-13804265 | Msa0839090:intron | 45.0% | |
| AGACGTTTAGGTATAGAGGC+AGG | - | chr5_4:13804407-13804426 | Msa0839090:CDS | 45.0% | |
| TTCTTGTCTTCTGTTCGGTC+AGG | - | chr5_4:13804994-13805013 | Msa0839090:CDS | 45.0% | |
| ! | GATGTGTTTGGCTGGTTCAT+AGG | - | chr5_4:13805747-13805766 | Msa0839090:CDS | 45.0% |
| CGGCGGAGATAAAAGTGGAT+CGG | + | chr5_4:13800517-13800536 | None:intergenic | 50.0% | |
| GCGTCTGCGTTAGGTGAATT+AGG | + | chr5_4:13800564-13800583 | None:intergenic | 50.0% | |
| GGAAGATGATTCACCGTCGA+AGG | + | chr5_4:13800598-13800617 | None:intergenic | 50.0% | |
| CCATCGGAGAAACTTCGTGT+CGG | + | chr5_4:13800636-13800655 | None:intergenic | 50.0% | |
| ACACGAAGTTTCTCCGATGG+AGG | - | chr5_4:13800636-13800655 | Msa0839090:CDS | 50.0% | |
| GCTTTCTGATCGGTTATCGG+AGG | - | chr5_4:13800860-13800879 | Msa0839090:intron | 50.0% | |
| !!! | GCGGGTTTTTTATACCGCCA+AGG | - | chr5_4:13800889-13800908 | Msa0839090:CDS | 50.0% |
| ATACTCTTATCCGGCCTTGG+CGG | + | chr5_4:13800906-13800925 | None:intergenic | 50.0% | |
| GAGTCAGGTGATGCAAAAGC+AGG | - | chr5_4:13800932-13800951 | Msa0839090:CDS | 50.0% | |
| !! | AGCAGGAGTTTGTTGAGCAG+AGG | - | chr5_4:13800949-13800968 | Msa0839090:CDS | 50.0% |
| !! | AGGAGTTTGTTGAGCAGAGG+AGG | - | chr5_4:13800952-13800971 | Msa0839090:CDS | 50.0% |
| !! | GGAGTTTGTTGAGCAGAGGA+GGG | - | chr5_4:13800953-13800972 | Msa0839090:CDS | 50.0% |
| ! | TGGCGGATCATCCGATGATT+CGG | - | chr5_4:13801003-13801022 | Msa0839090:intron | 50.0% |
| ACATCTGTCGTACCCACCAA+CGG | + | chr5_4:13801074-13801093 | None:intergenic | 50.0% | |
| TACGACAGATGTGGCTTCGA+GGG | - | chr5_4:13801082-13801101 | Msa0839090:intron | 50.0% | |
| ! | AGATGTGGCTTCGAGGGTTT+TGG | - | chr5_4:13801088-13801107 | Msa0839090:intron | 50.0% |
| AAGCTGCCGAAGCAGTTGAT+GGG | - | chr5_4:13801122-13801141 | Msa0839090:intron | 50.0% | |
| TCCTAGTGAGGTTGTGCAAC+CGG | - | chr5_4:13801160-13801179 | Msa0839090:intron | 50.0% | |
| !! | AAGGAGGGAGGGATTTGTTG+AGG | - | chr5_4:13801186-13801205 | Msa0839090:intron | 50.0% |
| TCTATGGCGAATGATTGGGG+TGG | - | chr5_4:13801230-13801249 | Msa0839090:intron | 50.0% | |
| !! | TTCTAAGCCGCTTGTTGTCG+AGG | - | chr5_4:13801253-13801272 | Msa0839090:intron | 50.0% |
| GCAAGATATGGGAGAGACGA+TGG | - | chr5_4:13801719-13801738 | Msa0839090:intron | 50.0% | |
| GGAGAGACGATGGGTGAATT+AGG | - | chr5_4:13801729-13801748 | Msa0839090:intron | 50.0% | |
| GACGATGGGTGAATTAGGGT+TGG | - | chr5_4:13801734-13801753 | Msa0839090:intron | 50.0% | |
| GGGGTGACAAATCAAGGACT+CGG | - | chr5_4:13802240-13802259 | Msa0839090:intron | 50.0% | |
| TCGGAAGTTAGAGGAGCTAC+AGG | - | chr5_4:13802259-13802278 | Msa0839090:intron | 50.0% | |
| GGCATCTTCAGTGGCTCTTA+TGG | + | chr5_4:13802288-13802307 | None:intergenic | 50.0% | |
| GGGAATCAGTTCAGAGGTCA+TGG | - | chr5_4:13803080-13803099 | Msa0839090:intron | 50.0% | |
| TCATCTGCTTGGGATGTGTG+TGG | - | chr5_4:13803143-13803162 | Msa0839090:intron | 50.0% | |
| CTTGGAGTGTGCTCATCTCA+AGG | + | chr5_4:13803353-13803372 | None:intergenic | 50.0% | |
| CTTGAGATGAGCACACTCCA+AGG | - | chr5_4:13803351-13803370 | Msa0839090:intron | 50.0% | |
| !! | AAGGTCTTGGTTTGGGACCT+TGG | + | chr5_4:13803371-13803390 | None:intergenic | 50.0% |
| GGTCCCAAACCAAGACCTTT+AGG | - | chr5_4:13803372-13803391 | Msa0839090:intron | 50.0% | |
| !! | TAGGGTTGGCCTAAAGGTCT+TGG | + | chr5_4:13803384-13803403 | None:intergenic | 50.0% |
| GACCTTTAGGCCAACCCTAA+TGG | - | chr5_4:13803385-13803404 | Msa0839090:intron | 50.0% | |
| !! | ACCCATTAGGGTTGGCCTAA+AGG | + | chr5_4:13803390-13803409 | None:intergenic | 50.0% |
| CCATAGGTACCCATTAGGGT+TGG | + | chr5_4:13803398-13803417 | None:intergenic | 50.0% | |
| ! | CCAACCCTAATGGGTACCTA+TGG | - | chr5_4:13803395-13803414 | Msa0839090:intron | 50.0% |
| ! | GTCCAGACCTTTAGGTGTTG+AGG | - | chr5_4:13803658-13803677 | Msa0839090:intron | 50.0% |
| TCCCTCAACACCTAAAGGTC+TGG | + | chr5_4:13803663-13803682 | None:intergenic | 50.0% | |
| !! | AGACCTTTAGGTGTTGAGGG+AGG | - | chr5_4:13803662-13803681 | Msa0839090:intron | 50.0% |
| TGTCCTCCCTCAACACCTAA+AGG | + | chr5_4:13803668-13803687 | None:intergenic | 50.0% | |
| !! | TTTCCCTCCCTTTTTGGCCA+AGG | - | chr5_4:13803739-13803758 | Msa0839090:intron | 50.0% |
| !! | TTCCCTCCCTTTTTGGCCAA+GGG | - | chr5_4:13803740-13803759 | Msa0839090:intron | 50.0% |
| AGAAGGCCCTTGGCCAAAAA+GGG | + | chr5_4:13803749-13803768 | None:intergenic | 50.0% | |
| AAAGAGAGAGAGAAGGCCCT+TGG | + | chr5_4:13803759-13803778 | None:intergenic | 50.0% | |
| GGTCGTGCAAAGATGCAGTA+AGG | + | chr5_4:13803900-13803919 | None:intergenic | 50.0% | |
| GCATCTTTGCACGACCTGTT+TGG | - | chr5_4:13803904-13803923 | Msa0839090:intron | 50.0% | |
| TCATCTACTCGTGACGTGTG+TGG | - | chr5_4:13804116-13804135 | Msa0839090:CDS | 50.0% | |
| CCCCCTGAACCACAAATCTT+GGG | + | chr5_4:13804153-13804172 | None:intergenic | 50.0% | |
| CCCAAGATTTGTGGTTCAGG+GGG | - | chr5_4:13804150-13804169 | Msa0839090:CDS | 50.0% | |
| TCCCCCTGAACCACAAATCT+TGG | + | chr5_4:13804154-13804173 | None:intergenic | 50.0% | |
| AGGTCTTTGGCTAGAAAGGC+TGG | - | chr5_4:13804188-13804207 | Msa0839090:intron | 50.0% | |
| GATGCAGCAGACAGAACACT+AGG | + | chr5_4:13804917-13804936 | None:intergenic | 50.0% | |
| AAGGCTTGATAGAGAGAGGC+AGG | - | chr5_4:13805323-13805342 | Msa0839090:CDS | 50.0% | |
| TGCTGCGGCGGAGATAAAAG+TGG | + | chr5_4:13800522-13800541 | None:intergenic | 55.0% | |
| ! | TGAAATTCGCGGTGGTGCTG+CGG | + | chr5_4:13800537-13800556 | None:intergenic | 55.0% |
| CCGACACGAAGTTTCTCCGA+TGG | - | chr5_4:13800633-13800652 | Msa0839090:CDS | 55.0% | |
| ! | GTTTGTTGAGCAGAGGAGGG+TGG | - | chr5_4:13800956-13800975 | Msa0839090:intron | 55.0% |
| GGTTCAAGGGAAGCTTCCGT+TGG | - | chr5_4:13801055-13801074 | Msa0839090:intron | 55.0% | |
| TCAAGGGAAGCTTCCGTTGG+TGG | - | chr5_4:13801058-13801077 | Msa0839090:intron | 55.0% | |
| CAAGGGAAGCTTCCGTTGGT+GGG | - | chr5_4:13801059-13801078 | Msa0839090:intron | 55.0% | |
| ! | GTTGGTGGGTACGACAGATG+TGG | - | chr5_4:13801073-13801092 | Msa0839090:intron | 55.0% |
| GTACGACAGATGTGGCTTCG+AGG | - | chr5_4:13801081-13801100 | Msa0839090:intron | 55.0% | |
| !!! | GTGGCTTCGAGGGTTTTGGA+TGG | - | chr5_4:13801092-13801111 | Msa0839090:intron | 55.0% |
| !!! | TTCGAGGGTTTTGGATGGCG+CGG | - | chr5_4:13801097-13801116 | Msa0839090:intron | 55.0% |
| GAAGCTGCCGAAGCAGTTGA+TGG | - | chr5_4:13801121-13801140 | Msa0839090:intron | 55.0% | |
| ! | AGCTGCCGAAGCAGTTGATG+GGG | - | chr5_4:13801123-13801142 | Msa0839090:intron | 55.0% |
| CTCTCCCCCATCAACTGCTT+CGG | + | chr5_4:13801131-13801150 | None:intergenic | 55.0% | |
| TTGTGCAACCGGCGAAAGGA+GGG | - | chr5_4:13801171-13801190 | Msa0839090:intron | 55.0% | |
| AAATCCCTCCCTCCTTTCGC+CGG | + | chr5_4:13801182-13801201 | None:intergenic | 55.0% | |
| ACTCTCCCAAACAGTCTCGC+AGG | + | chr5_4:13801408-13801427 | None:intergenic | 55.0% | |
| ! | AGATTAGTCGGTCCTTGGGC+CGG | + | chr5_4:13803226-13803245 | None:intergenic | 55.0% |
| TTAAATGGGACCCCCGCAAG+TGG | + | chr5_4:13803269-13803288 | None:intergenic | 55.0% | |
| AGCCCACTGAAATTGGCACC+AGG | - | chr5_4:13803310-13803329 | Msa0839090:intron | 55.0% | |
| GCCCACTGAAATTGGCACCA+GGG | - | chr5_4:13803311-13803330 | Msa0839090:intron | 55.0% | |
| ! | CCCCTGGTGCCAATTTCAGT+GGG | + | chr5_4:13803315-13803334 | None:intergenic | 55.0% |
| CCCACTGAAATTGGCACCAG+GGG | - | chr5_4:13803312-13803331 | Msa0839090:intron | 55.0% | |
| CCACTGAAATTGGCACCAGG+GGG | - | chr5_4:13803313-13803332 | Msa0839090:intron | 55.0% | |
| CACTGAAATTGGCACCAGGG+GGG | - | chr5_4:13803314-13803333 | Msa0839090:intron | 55.0% | |
| GAGAAGGCCCTTGGCCAAAA+AGG | + | chr5_4:13803750-13803769 | None:intergenic | 55.0% | |
| GAACGGCGTCCAAACAAGCT+AGG | + | chr5_4:13803852-13803871 | None:intergenic | 55.0% | |
| ! | AGCTTGTTTGGACGCCGTTC+TGG | - | chr5_4:13803852-13803871 | Msa0839090:intron | 55.0% |
| AGAGCGTGGACATCACGCTC+CGG | + | chr5_4:13800431-13800450 | None:intergenic | 60.0% | |
| AGCTCGGCGATGAGAGAGGA+TGG | + | chr5_4:13800476-13800495 | None:intergenic | 60.0% | |
| ACGAAGCTCGGCGATGAGAG+AGG | + | chr5_4:13800480-13800499 | None:intergenic | 60.0% | |
| ATCGCCGAGCTTCGTTTCGC+CGG | - | chr5_4:13800485-13800504 | Msa0839090:three_prime_UTR | 60.0% | |
| TCCACCGGCGAAACGAAGCT+CGG | + | chr5_4:13800492-13800511 | None:intergenic | 60.0% | |
| ! | CGGTTATCGGAGGCGTATCG+CGG | - | chr5_4:13800870-13800889 | Msa0839090:intron | 60.0% |
| ! | GGTTATCGGAGGCGTATCGC+GGG | - | chr5_4:13800871-13800890 | Msa0839090:intron | 60.0% |
| TGAGCAGAGGAGGGTGGCAT+TGG | - | chr5_4:13800962-13800981 | Msa0839090:intron | 60.0% | |
| !! | GCTGCCGAAGCAGTTGATGG+GGG | - | chr5_4:13801124-13801143 | Msa0839090:intron | 60.0% |
| GCCGGTTGCACAACCTCACT+AGG | + | chr5_4:13801164-13801183 | None:intergenic | 60.0% | |
| GAGGTTGTGCAACCGGCGAA+AGG | - | chr5_4:13801167-13801186 | Msa0839090:intron | 60.0% | |
| GTTGTGCAACCGGCGAAAGG+AGG | - | chr5_4:13801170-13801189 | Msa0839090:intron | 60.0% | |
| !! | AAAACTCGGTGTCCGGCCCA+AGG | - | chr5_4:13803211-13803230 | Msa0839090:intron | 60.0% |
| CCGCAAGTGGACGGTGGAAT+CGG | + | chr5_4:13803256-13803275 | None:intergenic | 60.0% | |
| CCGATTCCACCGTCCACTTG+CGG | - | chr5_4:13803253-13803272 | Msa0839090:intron | 60.0% | |
| CGATTCCACCGTCCACTTGC+GGG | - | chr5_4:13803254-13803273 | Msa0839090:intron | 60.0% | |
| GATTCCACCGTCCACTTGCG+GGG | - | chr5_4:13803255-13803274 | Msa0839090:intron | 60.0% | |
| ATTCCACCGTCCACTTGCGG+GGG | - | chr5_4:13803256-13803275 | Msa0839090:intron | 60.0% | |
| ! | CCCCCTGGTGCCAATTTCAG+TGG | + | chr5_4:13803316-13803335 | None:intergenic | 60.0% |
| GTCTCGTGTTTGATCCCCCC+TGG | + | chr5_4:13803331-13803350 | None:intergenic | 60.0% | |
| GGCCCTTGGCCAAAAAGGGA+GGG | + | chr5_4:13803745-13803764 | None:intergenic | 60.0% | |
| AGGCCCTTGGCCAAAAAGGG+AGG | + | chr5_4:13803746-13803765 | None:intergenic | 60.0% | |
| ! | TGTGGTTCAGGGGGAGTACG+AGG | - | chr5_4:13804159-13804178 | Msa0839090:CDS | 60.0% |
| ! | GGGGGAGTACGAGGTTCCAA+AGG | - | chr5_4:13804168-13804187 | Msa0839090:CDS | 60.0% |
| !! | AATTCGCGGTGGTGCTGCGG+CGG | + | chr5_4:13800534-13800553 | None:intergenic | 65.0% |
| TGCAACCGGCGAAAGGAGGG+AGG | - | chr5_4:13801174-13801193 | Msa0839090:intron | 65.0% | |
| GCAACCGGCGAAAGGAGGGA+GGG | - | chr5_4:13801175-13801194 | Msa0839090:intron | 65.0% | |
| ATGGGACCCCCGCAAGTGGA+CGG | + | chr5_4:13803265-13803284 | None:intergenic | 65.0% | |
| GCCGAGCTTCGTTTCGCCGG+TGG | - | chr5_4:13800488-13800507 | Msa0839090:three_prime_UTR | 70.0% | |
| GGACCCCCGCAAGTGGACGG+TGG | + | chr5_4:13803262-13803281 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 13800291 | 13805983 | 13800291 | ID=Msa0839090;Name=Msa0839090 |
| chr5_4 | mRNA | 13800291 | 13805983 | 13800291 | ID=Msa0839090-mRNA-1;Parent=Msa0839090;Name=Msa0839090-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.8|1|1|1|5|321|551 |
| chr5_4 | exon | 13800291 | 13800692 | 13800291 | ID=Msa0839090-mRNA-1:exon:6130;Parent=Msa0839090-mRNA-1 |
| chr5_4 | exon | 13800888 | 13800974 | 13800888 | ID=Msa0839090-mRNA-1:exon:6129;Parent=Msa0839090-mRNA-1 |
| chr5_4 | exon | 13803931 | 13804191 | 13803931 | ID=Msa0839090-mRNA-1:exon:6128;Parent=Msa0839090-mRNA-1 |
| chr5_4 | exon | 13804369 | 13804578 | 13804369 | ID=Msa0839090-mRNA-1:exon:6127;Parent=Msa0839090-mRNA-1 |
| chr5_4 | exon | 13804967 | 13805983 | 13804967 | ID=Msa0839090-mRNA-1:exon:6126;Parent=Msa0839090-mRNA-1 |
| chr5_4 | CDS | 13804967 | 13805983 | 13804967 | ID=Msa0839090-mRNA-1:cds;Parent=Msa0839090-mRNA-1 |
| chr5_4 | CDS | 13804369 | 13804578 | 13804369 | ID=Msa0839090-mRNA-1:cds;Parent=Msa0839090-mRNA-1 |
| chr5_4 | CDS | 13803931 | 13804191 | 13803931 | ID=Msa0839090-mRNA-1:cds;Parent=Msa0839090-mRNA-1 |
| chr5_4 | CDS | 13800888 | 13800974 | 13800888 | ID=Msa0839090-mRNA-1:cds;Parent=Msa0839090-mRNA-1 |
| chr5_4 | CDS | 13800612 | 13800692 | 13800612 | ID=Msa0839090-mRNA-1:cds;Parent=Msa0839090-mRNA-1 |
| chr5_4 | three_prime_UTR | 13800291 | 13800611 | 13800291 | ID=Msa0839090-mRNA-1:three_prime_utr;Parent=Msa0839090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
