Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656810 | XP_003629679.1 | 98.284 | 408 | 7 | 0 | 1 | 408 | 1 | 408 | 0.0 | 805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656810 | sp|Q6GL77|UBXN1_XENTR | 32.780 | 241 | 127 | 5 | 114 | 327 | 7 | 239 | 2.87e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656810 | G7LHW1 | 98.284 | 408 | 7 | 0 | 1 | 408 | 1 | 408 | 0.0 | 805 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001330 | Msa0656810 | 0.802188 | 6.314763e-49 | -8.615850e-47 |
| Msa0007850 | Msa0656810 | 0.837113 | 6.294416e-57 | -8.615850e-47 |
| Msa0012220 | Msa0656810 | 0.813863 | 2.063382e-51 | -8.615850e-47 |
| Msa0016540 | Msa0656810 | 0.804597 | 2.001846e-49 | -8.615850e-47 |
| Msa0033880 | Msa0656810 | 0.824554 | 7.580295e-54 | -8.615850e-47 |
| Msa0041690 | Msa0656810 | 0.803709 | 3.063393e-49 | -8.615850e-47 |
| Msa0047640 | Msa0656810 | 0.804869 | 1.756424e-49 | -8.615850e-47 |
| Msa0056270 | Msa0656810 | 0.827046 | 1.941655e-54 | -8.615850e-47 |
| Msa0062350 | Msa0656810 | 0.827616 | 1.418212e-54 | -8.615850e-47 |
| Msa0076580 | Msa0656810 | 0.802966 | 4.366255e-49 | -8.615850e-47 |
| Msa0076780 | Msa0656810 | 0.806509 | 7.946045e-50 | -8.615850e-47 |
| Msa0077010 | Msa0656810 | 0.819385 | 1.194125e-52 | -8.615850e-47 |
| Msa0077900 | Msa0656810 | 0.807007 | 6.236886e-50 | -8.615850e-47 |
| Msa0097950 | Msa0656810 | 0.803759 | 2.990505e-49 | -8.615850e-47 |
| Msa0118600 | Msa0656810 | 0.816801 | 4.584741e-52 | -8.615850e-47 |
| Msa0610090 | Msa0656810 | 0.800262 | 1.565100e-48 | -8.615850e-47 |
| Msa0615580 | Msa0656810 | 0.806880 | 6.635468e-50 | -8.615850e-47 |
| Msa0619860 | Msa0656810 | 0.808138 | 3.588231e-50 | -8.615850e-47 |
| Msa0633570 | Msa0656810 | 0.850015 | 2.231067e-60 | -8.615850e-47 |
| Msa0639150 | Msa0656810 | 0.818221 | 2.194597e-52 | -8.615850e-47 |
| Msa0641200 | Msa0656810 | 0.803209 | 3.888671e-49 | -8.615850e-47 |
| Msa0644030 | Msa0656810 | 0.809020 | 2.326054e-50 | -8.615850e-47 |
| Msa0656810 | Msa0658480 | 0.806212 | 9.178547e-50 | -8.615850e-47 |
| Msa0656810 | Msa0659990 | 0.801239 | 9.890559e-49 | -8.615850e-47 |
| Msa0656810 | Msa0687230 | 0.809743 | 1.627473e-50 | -8.615850e-47 |
| Msa0656810 | Msa0705000 | 0.803187 | 3.928863e-49 | -8.615850e-47 |
| Msa0656810 | Msa0712560 | 0.809410 | 1.918378e-50 | -8.615850e-47 |
| Msa0656810 | Msa0720030 | 0.804482 | 2.114759e-49 | -8.615850e-47 |
| Msa0656810 | Msa0744100 | 0.810262 | 1.258269e-50 | -8.615850e-47 |
| Msa0656810 | Msa0760090 | 0.833361 | 5.574415e-56 | -8.615850e-47 |
| Msa0656810 | Msa0819540 | 0.820312 | 7.330866e-53 | -8.615850e-47 |
| Msa0656810 | Msa0822170 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0656810 | Msa0822180 | 0.808584 | 2.882681e-50 | -8.615850e-47 |
| Msa0656810 | Msa0825270 | 0.830787 | 2.412351e-55 | -8.615850e-47 |
| Msa0656810 | Msa0826510 | 0.882542 | 9.548617e-71 | -8.615850e-47 |
| Msa0656810 | Msa0839090 | 0.801799 | 7.591769e-49 | -8.615850e-47 |
| Msa0656810 | Msa0864420 | 0.803049 | 4.196866e-49 | -8.615850e-47 |
| Msa0656810 | Msa0865620 | 0.875689 | 2.527588e-68 | -8.615850e-47 |
| Msa0656810 | Msa0869010 | 0.803635 | 3.173677e-49 | -8.615850e-47 |
| Msa0656810 | Msa0870650 | 0.827999 | 1.147196e-54 | -8.615850e-47 |
| Msa0656810 | Msa0883520 | 0.806070 | 9.832912e-50 | -8.615850e-47 |
| Msa0656810 | Msa0888940 | 0.801809 | 7.555695e-49 | -8.615850e-47 |
| Msa0656810 | Msa0913240 | 0.838523 | 2.734877e-57 | -8.615850e-47 |
| Msa0656810 | Msa0943170 | 0.826458 | 2.682918e-54 | -8.615850e-47 |
| Msa0656810 | Msa0961350 | 0.806050 | 9.931190e-50 | -8.615850e-47 |
| Msa0656810 | Msa0963020 | 0.853005 | 3.180624e-61 | -8.615850e-47 |
| Msa0656810 | Msa0973320 | 0.803148 | 4.002632e-49 | -8.615850e-47 |
| Msa0656810 | Msa0981430 | 0.828954 | 6.743799e-55 | -8.615850e-47 |
| Msa0656810 | Msa1017510 | 0.819483 | 1.134321e-52 | -8.615850e-47 |
| Msa0656810 | Msa1025940 | 0.800548 | 1.368888e-48 | -8.615850e-47 |
| Msa0656810 | Msa1027070 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0656810 | Msa1027250 | 0.816433 | 5.544570e-52 | -8.615850e-47 |
| Msa0656810 | Msa1027300 | 0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0656810 | Msa1027360 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0656810 | Msa1070390 | 0.824297 | 8.712211e-54 | -8.615850e-47 |
| Msa0656810 | Msa1074110 | 0.808896 | 2.471925e-50 | -8.615850e-47 |
| Msa0656810 | Msa1083880 | 0.834338 | 3.175143e-56 | -8.615850e-47 |
| Msa0656810 | Msa1089270 | 0.825656 | 4.162108e-54 | -8.615850e-47 |
| Msa0656810 | Msa1123350 | 0.832164 | 1.105389e-55 | -8.615850e-47 |
| Msa0656810 | Msa1127540 | 0.832952 | 7.048055e-56 | -8.615850e-47 |
| Msa0656810 | Msa1165750 | 0.801113 | 1.049206e-48 | -8.615850e-47 |
| Msa0656810 | Msa1165780 | 0.812809 | 3.516175e-51 | -8.615850e-47 |
| Msa0656810 | Msa1166870 | 0.811778 | 5.906101e-51 | -8.615850e-47 |
| Msa0656810 | Msa1175300 | 0.819738 | 9.921593e-53 | -8.615850e-47 |
| Msa0656810 | Msa1175390 | 0.811943 | 5.436571e-51 | -8.615850e-47 |
| Msa0656810 | Msa1179980 | 0.812030 | 5.203950e-51 | -8.615850e-47 |
| Msa0656810 | Msa1195300 | 0.803593 | 3.237763e-49 | -8.615850e-47 |
| Msa0656810 | Msa1201810 | 0.807191 | 5.702901e-50 | -8.615850e-47 |
| Msa0656810 | Msa1202580 | 0.807324 | 5.344908e-50 | -8.615850e-47 |
| Msa0656810 | Msa1205850 | 0.832398 | 9.672359e-56 | -8.615850e-47 |
| Msa0656810 | Msa1206650 | 0.810885 | 9.227126e-51 | -8.615850e-47 |
| Msa0656810 | Msa1211770 | 0.803903 | 2.792043e-49 | -8.615850e-47 |
| Msa0656810 | Msa1211830 | 0.801541 | 8.576497e-49 | -8.615850e-47 |
| Msa0656810 | Msa1227690 | 0.800129 | 1.665610e-48 | -8.615850e-47 |
| Msa0656810 | Msa1229620 | 0.806318 | 8.718375e-50 | -8.615850e-47 |
| Msa0656810 | Msa1241190 | 0.809938 | 1.477461e-50 | -8.615850e-47 |
| Msa0656810 | Msa1242640 | 0.808187 | 3.502727e-50 | -8.615850e-47 |
| Msa0656810 | Msa1270620 | 0.818228 | 2.187407e-52 | -8.615850e-47 |
| Msa0656810 | Msa1270690 | 0.811928 | 5.477940e-51 | -8.615850e-47 |
| Msa0656810 | Msa1276970 | 0.822701 | 2.057457e-53 | -8.615850e-47 |
| Msa0656810 | Msa1277360 | 0.806666 | 7.363936e-50 | -8.615850e-47 |
| Msa0656810 | Msa1306990 | 0.802869 | 4.572426e-49 | -8.615850e-47 |
| Msa0656810 | Msa1310230 | 0.812126 | 4.959803e-51 | -8.615850e-47 |
| Msa0656810 | Msa1329300 | 0.832577 | 8.733987e-56 | -8.615850e-47 |
| Msa0656810 | Msa1329450 | 0.822963 | 1.788045e-53 | -8.615850e-47 |
| Msa0656810 | Msa1331710 | 0.811089 | 8.334268e-51 | -8.615850e-47 |
| Msa0656810 | Msa1344310 | 0.807607 | 4.654829e-50 | -8.615850e-47 |
| Msa0656810 | Msa1349570 | 0.805983 | 1.025567e-49 | -8.615850e-47 |
| Msa0656810 | Msa1351540 | 0.806002 | 1.016101e-49 | -8.615850e-47 |
| Msa0656810 | Msa1356610 | 0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0656810 | Msa1364160 | 0.809811 | 1.573576e-50 | -8.615850e-47 |
| Msa0656810 | Msa1373170 | 0.832645 | 8.401081e-56 | -8.615850e-47 |
| Msa0656810 | Msa1373820 | 0.808059 | 3.730576e-50 | -8.615850e-47 |
| Msa0656810 | Msa1385810 | 0.821801 | 3.328807e-53 | -8.615850e-47 |
| Msa0656810 | Msa1391480 | 0.851351 | 9.389994e-61 | -8.615850e-47 |
| Msa0656810 | Msa1398790 | 0.848810 | 4.834957e-60 | -8.615850e-47 |
| Msa0656810 | Msa1403570 | 0.855694 | 5.312450e-62 | -8.615850e-47 |
| Msa0656810 | Msa1409260 | 0.833206 | 6.091258e-56 | -8.615850e-47 |
| Msa0656810 | Msa1411500 | 0.810889 | 9.209764e-51 | -8.615850e-47 |
| Msa0656810 | Msa1411950 | 0.817998 | 2.464725e-52 | -8.615850e-47 |
| Msa0656810 | Msa1418500 | 0.803133 | 4.031553e-49 | -8.615850e-47 |
| Msa0656810 | Msa1420660 | 0.828315 | 9.627969e-55 | -8.615850e-47 |
| Msa0656810 | Msa1427160 | 0.818576 | 1.823440e-52 | -8.615850e-47 |
| Msa0656810 | Msa1435440 | 0.823391 | 1.420285e-53 | -8.615850e-47 |
| Msa0656810 | Msa1450720 | 0.802030 | 6.807602e-49 | -8.615850e-47 |
| Msa0656810 | Msa1459910 | 0.876140 | 1.769078e-68 | -8.615850e-47 |
| Msa0656810 | Msa1459960 | 0.806073 | 9.820467e-50 | -8.615850e-47 |
| Msa0125790 | Msa0656810 | 0.818622 | 1.780766e-52 | -8.615850e-47 |
| Msa0126840 | Msa0656810 | 0.844734 | 6.292127e-59 | -8.615850e-47 |
| Msa0126880 | Msa0656810 | 0.806526 | 7.881657e-50 | -8.615850e-47 |
| Msa0127040 | Msa0656810 | 0.831967 | 1.236166e-55 | -8.615850e-47 |
| Msa0127850 | Msa0656810 | 0.823412 | 1.404965e-53 | -8.615850e-47 |
| Msa0142110 | Msa0656810 | 0.952443 | 2.396618e-110 | -8.615850e-47 |
| Msa0142410 | Msa0656810 | 0.850378 | 1.765447e-60 | -8.615850e-47 |
| Msa0144380 | Msa0656810 | 0.815203 | 1.042676e-51 | -8.615850e-47 |
| Msa0167400 | Msa0656810 | 0.803642 | 3.162680e-49 | -8.615850e-47 |
| Msa0167480 | Msa0656810 | 0.807026 | 6.179744e-50 | -8.615850e-47 |
| Msa0168090 | Msa0656810 | 0.823731 | 1.182537e-53 | -8.615850e-47 |
| Msa0168940 | Msa0656810 | 0.806683 | 7.301072e-50 | -8.615850e-47 |
| Msa0171850 | Msa0656810 | 0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0171940 | Msa0656810 | 0.806207 | 9.199908e-50 | -8.615850e-47 |
| Msa0174000 | Msa0656810 | 0.837881 | 3.999808e-57 | -8.615850e-47 |
| Msa0221030 | Msa0656810 | 0.839966 | 1.154936e-57 | -8.615850e-47 |
| Msa0221600 | Msa0656810 | 0.805920 | 1.057233e-49 | -8.615850e-47 |
| Msa0223170 | Msa0656810 | 0.821384 | 4.155511e-53 | -8.615850e-47 |
| Msa0230520 | Msa0656810 | 0.801356 | 9.360959e-49 | -8.615850e-47 |
| Msa0383130 | Msa0656810 | 0.825462 | 4.626703e-54 | -8.615850e-47 |
| Msa0384670 | Msa0656810 | 0.816398 | 5.646255e-52 | -8.615850e-47 |
| Msa0434570 | Msa0656810 | 0.800877 | 1.172508e-48 | -8.615850e-47 |
| Msa0434770 | Msa0656810 | 0.813359 | 2.664560e-51 | -8.615850e-47 |
| Msa0436200 | Msa0656810 | 0.811312 | 7.456308e-51 | -8.615850e-47 |
| Msa0443390 | Msa0656810 | 0.801770 | 7.696433e-49 | -8.615850e-47 |
| Msa0468490 | Msa0656810 | 0.839905 | 1.197604e-57 | -8.615850e-47 |
| Msa0474700 | Msa0656810 | 0.826396 | 2.775312e-54 | -8.615850e-47 |
| Msa0478580 | Msa0656810 | 0.821843 | 3.254354e-53 | -8.615850e-47 |
| Msa0479620 | Msa0656810 | 0.838371 | 2.991759e-57 | -8.615850e-47 |
| Msa0241830 | Msa0656810 | 0.836371 | 9.730220e-57 | -8.615850e-47 |
| Msa0244970 | Msa0656810 | 0.803256 | 3.801275e-49 | -8.615850e-47 |
| Msa0245580 | Msa0656810 | 0.819249 | 1.282451e-52 | -8.615850e-47 |
| Msa0247060 | Msa0656810 | 0.806536 | 7.843170e-50 | -8.615850e-47 |
| Msa0248460 | Msa0656810 | 0.877738 | 4.937942e-69 | -8.615850e-47 |
| Msa0252410 | Msa0656810 | 0.807382 | 5.193636e-50 | -8.615850e-47 |
| Msa0262480 | Msa0656810 | 0.840195 | 1.006373e-57 | -8.615850e-47 |
| Msa0263220 | Msa0656810 | 0.800154 | 1.646078e-48 | -8.615850e-47 |
| Msa0270210 | Msa0656810 | 0.840296 | 9.472055e-58 | -8.615850e-47 |
| Msa0289180 | Msa0656810 | 0.816390 | 5.667533e-52 | -8.615850e-47 |
| Msa0295250 | Msa0656810 | 0.833597 | 4.867984e-56 | -8.615850e-47 |
| Msa0296250 | Msa0656810 | 0.837378 | 5.386175e-57 | -8.615850e-47 |
| Msa0300350 | Msa0656810 | 0.853419 | 2.419200e-61 | -8.615850e-47 |
| Msa0322090 | Msa0656810 | 0.845203 | 4.701735e-59 | -8.615850e-47 |
| Msa0332640 | Msa0656810 | 0.821459 | 3.991907e-53 | -8.615850e-47 |
| Msa0333190 | Msa0656810 | 0.820990 | 5.122603e-53 | -8.615850e-47 |
| Msa0363060 | Msa0656810 | 0.824783 | 6.693894e-54 | -8.615850e-47 |
| Msa0519150 | Msa0656810 | 0.816302 | 5.931641e-52 | -8.615850e-47 |
| Msa0534750 | Msa0656810 | 0.827543 | 1.476644e-54 | -8.615850e-47 |
| Msa0547990 | Msa0656810 | 0.806010 | 1.012514e-49 | -8.615850e-47 |
| Msa0550540 | Msa0656810 | 0.809628 | 1.722456e-50 | -8.615850e-47 |
| Msa0550570 | Msa0656810 | 0.840607 | 7.852572e-58 | -8.615850e-47 |
| Msa0593700 | Msa0656810 | 0.856654 | 2.780418e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656810 | MtrunA17_Chr8g0378341 | 98.284 | 408 | 7 | 0 | 1 | 408 | 1 | 408 | 0.0 | 805 |
| Msa0656810 | MtrunA17_Chr8g0339951 | 58.170 | 306 | 125 | 2 | 104 | 408 | 1 | 304 | 4.89e-118 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656810 | AT1G04850.1 | 76.755 | 413 | 91 | 3 | 1 | 408 | 1 | 413 | 0.0 | 561 |
| Msa0656810 | AT1G04850.2 | 75.633 | 316 | 74 | 2 | 96 | 408 | 9 | 324 | 2.44e-140 | 403 |
| Msa0656810 | AT5G48690.1 | 52.997 | 317 | 141 | 6 | 98 | 408 | 2 | 316 | 8.81e-87 | 267 |
| Msa0656810 | AT5G48690.2 | 53.171 | 205 | 90 | 4 | 209 | 408 | 63 | 266 | 1.43e-59 | 195 |
| Msa0656810 | AT5G48690.3 | 53.670 | 218 | 94 | 5 | 98 | 310 | 2 | 217 | 7.24e-48 | 163 |
Find 118 sgRNAs with CRISPR-Local
Find 556 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATGGCATTTGTTTCTTC+TGG | 0.107206 | 4_3:+66148926 | None:intergenic |
| TTGATTCAGTTGTAATTTAA+AGG | 0.172831 | 4_3:-66143525 | Msa0656810:three_prime_UTR |
| TTAGGAGCCTCTAAACTTAT+TGG | 0.215263 | 4_3:+66150326 | None:intergenic |
| GTTCAGATCCAGCTGAATTT+AGG | 0.250912 | 4_3:+66143589 | None:intergenic |
| TTCAGTGGATTCAGAGAAAT+TGG | 0.259726 | 4_3:+66150594 | None:intergenic |
| CCACATAAGTTAGAAGAGTT+TGG | 0.265357 | 4_3:+66144385 | None:intergenic |
| CTCCCTCATCTGCTCGGTTT+TGG | 0.272816 | 4_3:+66146214 | None:intergenic |
| TGGGATTCTGAATTCCCTTT+AGG | 0.291163 | 4_3:+66150308 | None:intergenic |
| TTTCAACAGCCCGTGCAATA+AGG | 0.291576 | 4_3:-66149901 | Msa0656810:CDS |
| TGCAGAGTTTCCTGCCAATT+AGG | 0.314647 | 4_3:-66146244 | Msa0656810:intron |
| GAGCTTCCCAAAGTACTCTT+TGG | 0.335831 | 4_3:+66143294 | None:intergenic |
| GAATGGCATTTGTTTCTTCT+GGG | 0.341561 | 4_3:+66148927 | None:intergenic |
| CGAAACGAATCACCGGAATA+TGG | 0.349302 | 4_3:-66150704 | Msa0656810:exon |
| CTCTACAACAGCTGCAGGCT+TGG | 0.356379 | 4_3:+66146348 | None:intergenic |
| CATTTGTTTCTTCTGGGGTA+AGG | 0.356425 | 4_3:+66148933 | None:intergenic |
| AGCAAAGCCAATAAGTTTAG+AGG | 0.359150 | 4_3:-66150333 | Msa0656810:CDS |
| AGCTGTTGTAGAGGAGAAAA+AGG | 0.364152 | 4_3:-66146338 | Msa0656810:intron |
| ATTATTACCAAAGAGTACTT+TGG | 0.371238 | 4_3:-66143301 | Msa0656810:three_prime_UTR |
| ATCACTAGTTCCACCCTCTT+GGG | 0.372205 | 4_3:+66150289 | None:intergenic |
| ACTTATTGGCTTTGCTGCTT+CGG | 0.374866 | 4_3:+66150340 | None:intergenic |
| GATCACTAGTTCCACCCTCT+TGG | 0.376605 | 4_3:+66150288 | None:intergenic |
| GGTGGATCCAATTGGTATAT+TGG | 0.380323 | 4_3:+66150729 | None:intergenic |
| TTGAATTCCTTGAAATTTGC+GGG | 0.388129 | 4_3:-66143674 | Msa0656810:CDS |
| TCTCAAACCCGCAAATTTCA+AGG | 0.390275 | 4_3:+66143667 | None:intergenic |
| GCGAAACCCCTGCCATATTC+CGG | 0.397441 | 4_3:+66150692 | None:intergenic |
| TTCAGTGTGTCCAGTTCTCT+TGG | 0.403511 | 4_3:+66150379 | None:intergenic |
| TTCAACAGCCCGTGCAATAA+GGG | 0.403545 | 4_3:-66149900 | Msa0656810:CDS |
| TTGGCTGTTGAAGGCTCCTC+TGG | 0.404673 | 4_3:+66146367 | None:intergenic |
| ATTTGTTTCTTCTGGGGTAA+GGG | 0.408133 | 4_3:+66148934 | None:intergenic |
| ATACCTTAGTTCCTTTAGAA+TGG | 0.408926 | 4_3:+66148910 | None:intergenic |
| GCCTCGAGGCTGCTGTAACT+TGG | 0.413530 | 4_3:-66149253 | Msa0656810:CDS |
| GTTTCGTCGGTGGATCCAAT+TGG | 0.417788 | 4_3:+66150721 | None:intergenic |
| CCAAACTCTTCTAACTTATG+TGG | 0.420810 | 4_3:-66144385 | Msa0656810:CDS |
| TTTGCAGGTTGTTAGCTTTG+AGG | 0.421356 | 4_3:-66146644 | Msa0656810:intron |
| TTATTACCAAAGAGTACTTT+GGG | 0.429845 | 4_3:-66143300 | Msa0656810:three_prime_UTR |
| TTCTCCTCTACAACAGCTGC+AGG | 0.432013 | 4_3:+66146343 | None:intergenic |
| GCTTGAGGAACTTGAATCAA+TGG | 0.436658 | 4_3:-66149927 | Msa0656810:CDS |
| GGCTTTATAGGTGTAGGTAA+AGG | 0.443756 | 4_3:+66150781 | None:intergenic |
| GATTTACACACCAAGAGAAC+TGG | 0.446924 | 4_3:-66150389 | Msa0656810:CDS |
| GCTTTATAGGTGTAGGTAAA+GGG | 0.447958 | 4_3:+66150782 | None:intergenic |
| CTTGAGGAACTTGAATCAAT+GGG | 0.458924 | 4_3:-66149926 | Msa0656810:CDS |
| GCTGCAGGCTTGGCTGTTGA+AGG | 0.461571 | 4_3:+66146358 | None:intergenic |
| CGACCAATCCCACGTAGATC+CGG | 0.461930 | 4_3:+66150816 | None:intergenic |
| AGAAGAAGAAGAGAAGAGAA+TGG | 0.464524 | 4_3:-66148275 | Msa0656810:CDS |
| ATTGAATTCCTTGAAATTTG+CGG | 0.466357 | 4_3:-66143675 | Msa0656810:CDS |
| TGGTGGCAGGCCTAATTGGC+AGG | 0.466592 | 4_3:+66146234 | None:intergenic |
| TTGCGGTACTCTCTTGAAAT+CGG | 0.467068 | 4_3:-66150656 | Msa0656810:CDS |
| GTTTCTTCTGGGGTAAGGGA+GGG | 0.467929 | 4_3:+66148938 | None:intergenic |
| GTGTAGGTAAAGGGTGAGAA+GGG | 0.473358 | 4_3:+66150791 | None:intergenic |
| AGAGAGAATCAAGCAAAAGT+TGG | 0.474657 | 4_3:-66146589 | Msa0656810:CDS |
| TAAGTTTAGAGGCTCCTAAA+GGG | 0.480337 | 4_3:-66150322 | Msa0656810:CDS |
| TGTTTCTTCTGGGGTAAGGG+AGG | 0.481794 | 4_3:+66148937 | None:intergenic |
| CAAACTCTTCTAACTTATGT+GGG | 0.485491 | 4_3:-66144384 | Msa0656810:CDS |
| CCGGTGATTCGTTTCGTCGG+TGG | 0.485837 | 4_3:+66150711 | None:intergenic |
| GAACCGGATCTACGTGGGAT+TGG | 0.491480 | 4_3:-66150819 | Msa0656810:five_prime_UTR |
| GGTGTAGGTAAAGGGTGAGA+AGG | 0.493449 | 4_3:+66150790 | None:intergenic |
| AAGAAGACAACGAGAGAAAA+CGG | 0.494209 | 4_3:-66146741 | Msa0656810:intron |
| ATGCCATTCTAAAGGAACTA+AGG | 0.501820 | 4_3:-66148913 | Msa0656810:intron |
| ACGAATCACCGGAATATGGC+AGG | 0.506192 | 4_3:-66150700 | Msa0656810:exon |
| GCGGAAAGAAGACGAAAACT+TGG | 0.508359 | 4_3:-66146397 | Msa0656810:CDS |
| TTTGAGGAAAGCAGAGAAAG+AGG | 0.508582 | 4_3:-66146628 | Msa0656810:CDS |
| AATGGAGAGAGAAAGAGAAA+AGG | 0.510480 | 4_3:-66148257 | Msa0656810:intron |
| GGAGAGAATTCGAGTCGGTA+AGG | 0.511409 | 4_3:-66146788 | Msa0656810:CDS |
| AGAAACAAATGCCATTCTAA+AGG | 0.511452 | 4_3:-66148921 | Msa0656810:CDS |
| ATAAGTTTAGAGGCTCCTAA+AGG | 0.517070 | 4_3:-66150323 | Msa0656810:CDS |
| AGCTATAATCTTAAGGGAGA+AGG | 0.520095 | 4_3:-66148311 | Msa0656810:intron |
| GAAAGAGTTGGTGCTTTGAA+AGG | 0.523288 | 4_3:-66143702 | Msa0656810:CDS |
| AAGGGCATTTCATCTATGTC+AGG | 0.523907 | 4_3:+66149209 | None:intergenic |
| CAAGCCTGCAGCTGTTGTAG+AGG | 0.527882 | 4_3:-66146347 | Msa0656810:CDS |
| ATTGCAGTCCTAAATTCAGC+TGG | 0.528514 | 4_3:-66143597 | Msa0656810:CDS |
| TTGGAATGCTCTCTTCACTC+TGG | 0.530560 | 4_3:+66144404 | None:intergenic |
| CCACCAAAACCGAGCAGATG+AGG | 0.536858 | 4_3:-66146217 | Msa0656810:CDS |
| AAGAAGACGAAAACTTGGAT+TGG | 0.539216 | 4_3:-66146392 | Msa0656810:CDS |
| GAGCAGACGAGGTTGAGAAC+GGG | 0.547682 | 4_3:+66150571 | None:intergenic |
| AATGGCATTTGTTTCTTCTG+GGG | 0.548701 | 4_3:+66148928 | None:intergenic |
| AATGAAGTGCCCTTATTGCA+CGG | 0.554419 | 4_3:+66149891 | None:intergenic |
| ATGAAGTGCCCTTATTGCAC+GGG | 0.556855 | 4_3:+66149892 | None:intergenic |
| TGCGGGTTTGAGAAGATCGA+TGG | 0.557070 | 4_3:-66143657 | Msa0656810:CDS |
| TTCTATGGCTTTATAGGTGT+AGG | 0.562038 | 4_3:+66150775 | None:intergenic |
| TCGCTCCAGTGCGGTGATTG+CGG | 0.565094 | 4_3:-66150673 | Msa0656810:CDS |
| GCAATATCAACCTTCTCCCT+AGG | 0.569294 | 4_3:+66143615 | None:intergenic |
| GAAAAGCTGCGTTACTAAGA+CGG | 0.574213 | 4_3:+66144319 | None:intergenic |
| CAGAGAAAGAGGAAGAGCGA+AGG | 0.574752 | 4_3:-66146617 | Msa0656810:CDS |
| TGACATAGATGAAATGCCCT+TGG | 0.574903 | 4_3:-66149207 | Msa0656810:intron |
| ATTCCGGTGATTCGTTTCGT+CGG | 0.576659 | 4_3:+66150708 | None:intergenic |
| CAAGCACTCCCTCATCTGCT+CGG | 0.577094 | 4_3:+66146208 | None:intergenic |
| CTATGTCAGGCGTATTCTCG+TGG | 0.577322 | 4_3:+66149222 | None:intergenic |
| GAGGTTGAGAACGGGTTCAG+TGG | 0.580165 | 4_3:+66150579 | None:intergenic |
| GGAACTAGTGATCAGAATGA+AGG | 0.581651 | 4_3:-66150278 | Msa0656810:intron |
| CACCAAAACCGAGCAGATGA+GGG | 0.583334 | 4_3:-66146216 | Msa0656810:CDS |
| AGAGTTGGTGCTTTGAAAGG+AGG | 0.583659 | 4_3:-66143699 | Msa0656810:CDS |
| GGAGCAGACGAGGTTGAGAA+CGG | 0.583672 | 4_3:+66150570 | None:intergenic |
| GAGTACCGCAATCACCGCAC+TGG | 0.585883 | 4_3:+66150668 | None:intergenic |
| AGAGAAAGAGGAAGAGCGAA+GGG | 0.587718 | 4_3:-66146616 | Msa0656810:CDS |
| AGGAGTTGCTTGAAGCAAAG+AGG | 0.588418 | 4_3:-66146768 | Msa0656810:CDS |
| TCGGCAAGGTTTGGAGCAAG+TGG | 0.589086 | 4_3:+66150549 | None:intergenic |
| GCAAAAGTTGGAAGAAGACA+AGG | 0.592876 | 4_3:-66146577 | Msa0656810:intron |
| TGGAGCAAGTGGAGCAGACG+AGG | 0.599392 | 4_3:+66150560 | None:intergenic |
| GAATCACCGGAATATGGCAG+GGG | 0.604375 | 4_3:-66150698 | Msa0656810:exon |
| CGAATCACCGGAATATGGCA+GGG | 0.607477 | 4_3:-66150699 | Msa0656810:exon |
| CCACCGACGAAACGAATCAC+CGG | 0.609568 | 4_3:-66150711 | Msa0656810:five_prime_UTR |
| AAAACTTGGATTGGCTCCAG+AGG | 0.621215 | 4_3:-66146383 | Msa0656810:CDS |
| AAACTCTTCTAACTTATGTG+GGG | 0.629765 | 4_3:-66144383 | Msa0656810:CDS |
| TTCAGAGAAATTGGAGTGTG+AGG | 0.636378 | 4_3:+66150603 | None:intergenic |
| AGTTTAAGCAAAATATTGAG+AGG | 0.637294 | 4_3:-66143350 | Msa0656810:three_prime_UTR |
| TGTGTTTAACAGGAAAGAGT+TGG | 0.642404 | 4_3:-66143714 | Msa0656810:intron |
| AATTCAGAATCCCAAGAGGG+TGG | 0.646932 | 4_3:-66150299 | Msa0656810:CDS |
| GGGAATTCAGAATCCCAAGA+GGG | 0.649229 | 4_3:-66150302 | Msa0656810:CDS |
| AGAAGCTTTAGCTTTACTGA+CGG | 0.652551 | 4_3:+66148964 | None:intergenic |
| TTCTCTCAAGCAGAACCACA+AGG | 0.666147 | 4_3:-66146183 | Msa0656810:intron |
| GCATTAGAACCGGATCTACG+TGG | 0.669522 | 4_3:-66150825 | None:intergenic |
| CATTAGAACCGGATCTACGT+GGG | 0.670014 | 4_3:-66150824 | Msa0656810:five_prime_UTR |
| TATAGGTAACACTAGCCTCG+AGG | 0.680236 | 4_3:-66149267 | Msa0656810:intron |
| TCCAAGTTACAGCAGCCTCG+AGG | 0.700049 | 4_3:+66149252 | None:intergenic |
| GCAGGGGTTTCGCTCCAGTG+CGG | 0.706219 | 4_3:-66150682 | Msa0656810:CDS |
| ATTCAGGAGAGAATTCGAGT+CGG | 0.712094 | 4_3:-66146793 | Msa0656810:intron |
| AGGGAATTCAGAATCCCAAG+AGG | 0.725266 | 4_3:-66150303 | Msa0656810:CDS |
| GGGTTTGAGAAGATCGATGG+CGG | 0.728380 | 4_3:-66143654 | Msa0656810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAAAAATTCTTGTA+TGG | - | chr4_3:66144257-66144276 | Msa0656810:intron | 10.0% |
| !! | AAATTTAAAAATAACATTGT+TGG | - | chr4_3:66144547-66144566 | Msa0656810:intron | 10.0% |
| !!! | GATTTTATATTTACAATATT+GGG | - | chr4_3:66145938-66145957 | Msa0656810:intron | 10.0% |
| !!! | ATTTTATATTTACAATATTG+GGG | - | chr4_3:66145939-66145958 | Msa0656810:intron | 10.0% |
| !! | AAAAAAAAAAATTGTATTAG+AGG | + | chr4_3:66146250-66146269 | None:intergenic | 10.0% |
| !! | TTTCAAAATTTCAAAAAAAT+AGG | + | chr4_3:66147826-66147845 | None:intergenic | 10.0% |
| !!! | CTATTTAATAATTTCTTTTA+AGG | + | chr4_3:66148651-66148670 | None:intergenic | 10.0% |
| !! | CTTAAAAGAAATTATTAAAT+AGG | - | chr4_3:66148649-66148668 | Msa0656810:intron | 10.0% |
| !! | AATGATATAAAATTATTTGT+GGG | + | chr4_3:66148676-66148695 | None:intergenic | 10.0% |
| !! | TAATGATATAAAATTATTTG+TGG | + | chr4_3:66148677-66148696 | None:intergenic | 10.0% |
| !!! | ATAAAAAAAAATTACGGTTT+TGG | + | chr4_3:66143576-66143595 | None:intergenic | 15.0% |
| !! | GTTTGGATAAAAAAAAATTA+CGG | + | chr4_3:66143582-66143601 | None:intergenic | 15.0% |
| !! | TAATTCATTCATTATTCAAT+TGG | - | chr4_3:66144096-66144115 | Msa0656810:intron | 15.0% |
| !! | AATCTTATAAAATACAGAAA+TGG | - | chr4_3:66144123-66144142 | Msa0656810:intron | 15.0% |
| !! | GTATATAATCTTAAATTTCA+TGG | + | chr4_3:66144471-66144490 | None:intergenic | 15.0% |
| !! | TTAACTTTAACATGAAAAAT+AGG | + | chr4_3:66144676-66144695 | None:intergenic | 15.0% |
| !!! | GAATAATTTTAACCATTTAT+TGG | - | chr4_3:66145303-66145322 | Msa0656810:intron | 15.0% |
| !!! | CGATTTTATATTTACAATAT+TGG | - | chr4_3:66145937-66145956 | Msa0656810:intron | 15.0% |
| !!! | TTTTATATTTACAATATTGG+GGG | - | chr4_3:66145940-66145959 | Msa0656810:intron | 15.0% |
| !!! | ATATTTTTATAAAGCTATGA+TGG | + | chr4_3:66147188-66147207 | None:intergenic | 15.0% |
| !! | AAATTTCAAAAAAATAGGTA+TGG | + | chr4_3:66147821-66147840 | None:intergenic | 15.0% |
| !! | AATATCAACTCAAATTATAA+CGG | - | chr4_3:66148024-66148043 | Msa0656810:intron | 15.0% |
| !! | AGATTGAAGAAATTAATTTA+TGG | - | chr4_3:66148892-66148911 | Msa0656810:intron | 15.0% |
| !!! | AAGAAATCTAAGTTTTTCTA+TGG | + | chr4_3:66143341-66143360 | None:intergenic | 20.0% |
| !!! | TATTTTACCAATATACCAAT+TGG | - | chr4_3:66143362-66143381 | Msa0656810:three_prime_UTR | 20.0% |
| !! | GAAAAAACTTAATGAATGAT+TGG | + | chr4_3:66143615-66143634 | None:intergenic | 20.0% |
| !!! | TCAAATCGATTGATAATTTT+AGG | - | chr4_3:66143642-66143661 | Msa0656810:CDS | 20.0% |
| !!! | CAAATCGATTGATAATTTTA+GGG | - | chr4_3:66143643-66143662 | Msa0656810:CDS | 20.0% |
| !! | TCAAAACAAGTATTCTTTAT+GGG | - | chr4_3:66144386-66144405 | Msa0656810:CDS | 20.0% |
| !!! | TTTTTAAATTTTCCTTCAAG+CGG | + | chr4_3:66144538-66144557 | None:intergenic | 20.0% |
| !!! | TTTGAAACAACTTGATAATT+TGG | + | chr4_3:66145249-66145268 | None:intergenic | 20.0% |
| !!! | TTGTTTATGAGATTTTGTAA+GGG | + | chr4_3:66145359-66145378 | None:intergenic | 20.0% |
| !!! | AATTATTTCTAATGTAGCTT+AGG | - | chr4_3:66145404-66145423 | Msa0656810:intron | 20.0% |
| !!! | ATTATTTCTAATGTAGCTTA+GGG | - | chr4_3:66145405-66145424 | Msa0656810:intron | 20.0% |
| !!! | TTTTTTGAGCTATAATCTTA+AGG | - | chr4_3:66145780-66145799 | Msa0656810:intron | 20.0% |
| !!! | TTTTTGAGCTATAATCTTAA+GGG | - | chr4_3:66145781-66145800 | Msa0656810:intron | 20.0% |
| !!! | TTCTGGTTTTGATTTTTTAA+TGG | + | chr4_3:66146790-66146809 | None:intergenic | 20.0% |
| !! | TTGATTTAGTATTGCTTAAT+AGG | - | chr4_3:66146904-66146923 | Msa0656810:intron | 20.0% |
| !!! | TCTTTTAATCGTTAATTTAC+AGG | - | chr4_3:66147552-66147571 | Msa0656810:intron | 20.0% |
| !! | TTGATTACATAATGCTAAAA+AGG | - | chr4_3:66148075-66148094 | Msa0656810:intron | 20.0% |
| !!! | ACTAAATAACATAATTTGCA+GGG | + | chr4_3:66148111-66148130 | None:intergenic | 20.0% |
| !! | TCTAAAAACCTTTCTATTAA+TGG | - | chr4_3:66148158-66148177 | Msa0656810:intron | 20.0% |
| !! | GTTTATTTCAGCTTATAAAA+TGG | + | chr4_3:66148969-66148988 | None:intergenic | 20.0% |
| !!! | CAATTTGATGTCATTTTATT+GGG | - | chr4_3:66149169-66149188 | Msa0656810:intron | 20.0% |
| !! | ATAATCTATTGATCTCATAT+TGG | + | chr4_3:66149478-66149497 | None:intergenic | 20.0% |
| !!! | AAGAAAAAGAAATTGCATTT+TGG | + | chr4_3:66149509-66149528 | None:intergenic | 20.0% |
| !! | AATCATAATTTCAGTTCTTA+AGG | - | chr4_3:66149542-66149561 | Msa0656810:intron | 20.0% |
| !! | AATAATTTAATGACTCAAAG+GGG | + | chr4_3:66150128-66150147 | None:intergenic | 20.0% |
| !! | CAATAATTTAATGACTCAAA+GGG | + | chr4_3:66150129-66150148 | None:intergenic | 20.0% |
| !! | ACAATAATTTAATGACTCAA+AGG | + | chr4_3:66150130-66150149 | None:intergenic | 20.0% |
| !! | TTTGAGTCATTAAATTATTG+TGG | - | chr4_3:66150129-66150148 | Msa0656810:intron | 20.0% |
| !! | TTGATTCAGTTGTAATTTAA+AGG | - | chr4_3:66150573-66150592 | Msa0656810:CDS | 20.0% |
| !!! | AAGTTTTTCTATGGCTTTAT+AGG | + | chr4_3:66143332-66143351 | None:intergenic | 25.0% |
| !!! | AAAAAATTACGGTTTTGGAT+CGG | + | chr4_3:66143571-66143590 | None:intergenic | 25.0% |
| ! | AAACTTAATGAATGATTGGA+AGG | + | chr4_3:66143611-66143630 | None:intergenic | 25.0% |
| ! | TTGTTTCAAAATCTGAATTC+AGG | - | chr4_3:66143681-66143700 | Msa0656810:CDS | 25.0% |
| ! | TTAGTGGTGATACTTATTTA+GGG | - | chr4_3:66143871-66143890 | Msa0656810:intron | 25.0% |
| ! | GTCAAAACAAGTATTCTTTA+TGG | - | chr4_3:66144385-66144404 | Msa0656810:CDS | 25.0% |
| ! | ATAATTTCATAAATGTGCTG+TGG | + | chr4_3:66144436-66144455 | None:intergenic | 25.0% |
| ! | ATAACATTGTTGGATTCTAT+TGG | - | chr4_3:66144557-66144576 | Msa0656810:intron | 25.0% |
| ! | CATGTTAAAGTTAAAGTATG+TGG | - | chr4_3:66144682-66144701 | Msa0656810:intron | 25.0% |
| ! | AAGCAGTTTATTTATTCACA+AGG | - | chr4_3:66144723-66144742 | Msa0656810:intron | 25.0% |
| ! | AGCAATTCTGTTTATTCATA+CGG | - | chr4_3:66144917-66144936 | Msa0656810:intron | 25.0% |
| ! | ACAAGTTGTATATATAAGAG+TGG | - | chr4_3:66145035-66145054 | Msa0656810:intron | 25.0% |
| ! | TAAAATAAGTTTCACGTTGT+GGG | - | chr4_3:66145222-66145241 | Msa0656810:intron | 25.0% |
| !!! | ATTGAATTTTGTTGTAGCAA+AGG | - | chr4_3:66145274-66145293 | Msa0656810:intron | 25.0% |
| ! | ACATTACATCAACCAATAAA+TGG | + | chr4_3:66145318-66145337 | None:intergenic | 25.0% |
| !! | TTGGTTGATGTAATGTATTA+TGG | - | chr4_3:66145322-66145341 | Msa0656810:intron | 25.0% |
| ! | ATGTAATGTATTATGGCTAA+TGG | - | chr4_3:66145329-66145348 | Msa0656810:intron | 25.0% |
| !! | CTTGTTTATGAGATTTTGTA+AGG | + | chr4_3:66145360-66145379 | None:intergenic | 25.0% |
| ! | TAAACAAGCAATTATTGTTG+AGG | - | chr4_3:66145372-66145391 | Msa0656810:intron | 25.0% |
| ! | TTGATCCTGTTGTATATTAA+GGG | + | chr4_3:66145549-66145568 | None:intergenic | 25.0% |
| ! | ATTGATCCTGTTGTATATTA+AGG | + | chr4_3:66145550-66145569 | None:intergenic | 25.0% |
| !!! | ATGACCATATATTTTGTTGT+AGG | - | chr4_3:66145583-66145602 | Msa0656810:intron | 25.0% |
| ! | TCTACCTACAACAAAATATA+TGG | + | chr4_3:66145590-66145609 | None:intergenic | 25.0% |
| !!! | ATATTTTGTTGTAGGTAGAA+TGG | - | chr4_3:66145591-66145610 | Msa0656810:intron | 25.0% |
| !! | AAGTTATTGTTACTAGTTTG+CGG | - | chr4_3:66145749-66145768 | Msa0656810:intron | 25.0% |
| ! | ATATAAAATCGTAAGATGCT+AGG | + | chr4_3:66145928-66145947 | None:intergenic | 25.0% |
| ! | TCTTCAAATTAAGTCTATGT+TGG | + | chr4_3:66146202-66146221 | None:intergenic | 25.0% |
| !! | ATTGTATTAGAGGATAGTTT+TGG | + | chr4_3:66146240-66146259 | None:intergenic | 25.0% |
| ! | ATACAAAATCTTCCTCATTT+GGG | + | chr4_3:66146301-66146320 | None:intergenic | 25.0% |
| !! | TAGTAAAAGAAGTTGAGTTT+TGG | - | chr4_3:66146495-66146514 | Msa0656810:intron | 25.0% |
| !!! | CTGGTTTTGATTTTTTTGAT+TGG | - | chr4_3:66146647-66146666 | Msa0656810:intron | 25.0% |
| ! | ATTAACACCATCATGAAAAA+TGG | - | chr4_3:66146744-66146763 | Msa0656810:CDS | 25.0% |
| !! | TTTTAATGGAGAGAGATTTT+TGG | + | chr4_3:66146776-66146795 | None:intergenic | 25.0% |
| !!! | GAGTATTTTTATCTGAATTC+TGG | + | chr4_3:66146807-66146826 | None:intergenic | 25.0% |
| ! | GATTCTCATGAATAAGATAT+AGG | - | chr4_3:66147041-66147060 | Msa0656810:intron | 25.0% |
| ! | AAGATATAGGTAGATTAATC+AGG | - | chr4_3:66147054-66147073 | Msa0656810:intron | 25.0% |
| ! | TTGAGGTAAAAACATGTATA+TGG | + | chr4_3:66147249-66147268 | None:intergenic | 25.0% |
| !! | TGCAGTCAAATTTAAAACAT+AGG | + | chr4_3:66147407-66147426 | None:intergenic | 25.0% |
| ! | CTCAAGCATTCATAAAAAAT+TGG | + | chr4_3:66147586-66147605 | None:intergenic | 25.0% |
| !! | CTTTATTTCTCAATTATGAC+AGG | - | chr4_3:66147679-66147698 | Msa0656810:intron | 25.0% |
| ! | ATTATAACGGTGAATAATGT+AGG | - | chr4_3:66148037-66148056 | Msa0656810:intron | 25.0% |
| ! | ATTATGTAATCAAGCTTCTA+TGG | + | chr4_3:66148068-66148087 | None:intergenic | 25.0% |
| !! | CTAAATAACATAATTTGCAG+GGG | + | chr4_3:66148110-66148129 | None:intergenic | 25.0% |
| !! | CACTAAATAACATAATTTGC+AGG | + | chr4_3:66148112-66148131 | None:intergenic | 25.0% |
| !! | AGGTGACACTTTTAATATAT+TGG | + | chr4_3:66148222-66148241 | None:intergenic | 25.0% |
| ! | AACATTAGAAATATGAGAAG+AGG | - | chr4_3:66148284-66148303 | Msa0656810:CDS | 25.0% |
| ! | ACATTAGAAATATGAGAAGA+GGG | - | chr4_3:66148285-66148304 | Msa0656810:CDS | 25.0% |
| ! | AAAAGTAATACATGAAGTTG+TGG | + | chr4_3:66148379-66148398 | None:intergenic | 25.0% |
| ! | TGGATAGATAAATCAATCTA+TGG | + | chr4_3:66148428-66148447 | None:intergenic | 25.0% |
| !!! | ATAATTTCTTTTAAGGTGCT+GGG | + | chr4_3:66148644-66148663 | None:intergenic | 25.0% |
| !!! | AATAATTTCTTTTAAGGTGC+TGG | + | chr4_3:66148645-66148664 | None:intergenic | 25.0% |
| ! | TATTTAGCACCACATTAAAT+AGG | + | chr4_3:66148833-66148852 | None:intergenic | 25.0% |
| !! | TATTTAATGTGGTGCTAAAT+AGG | - | chr4_3:66148832-66148851 | Msa0656810:intron | 25.0% |
| !! | AATTAATTTATGGATTGTCG+TGG | - | chr4_3:66148902-66148921 | Msa0656810:intron | 25.0% |
| ! | AATGACAATAACATCCATAT+CGG | - | chr4_3:66149072-66149091 | Msa0656810:intron | 25.0% |
| ! | CCAATAAAATGACATCAAAT+TGG | + | chr4_3:66149171-66149190 | None:intergenic | 25.0% |
| !!! | CCAATTTGATGTCATTTTAT+TGG | - | chr4_3:66149168-66149187 | Msa0656810:intron | 25.0% |
| ! | GTCTTATCTTCATTATATGT+GGG | + | chr4_3:66149207-66149226 | None:intergenic | 25.0% |
| ! | TGCAAAGGTGAAAAATATTT+AGG | + | chr4_3:66149633-66149652 | None:intergenic | 25.0% |
| !! | GATCTCTTCTTCTTTTTATA+TGG | + | chr4_3:66149908-66149927 | None:intergenic | 25.0% |
| ! | AAAAAGAAGAAGAGATCTAT+AGG | - | chr4_3:66149911-66149930 | Msa0656810:CDS | 25.0% |
| ! | ATTAAATTATTGTGGAGCAT+AGG | - | chr4_3:66150137-66150156 | Msa0656810:intron | 25.0% |
| ! | ATTGAATTCCTTGAAATTTG+CGG | - | chr4_3:66150423-66150442 | Msa0656810:intron | 25.0% |
| !!! | GCAATAAAGAATCCTTTTTT+TGG | - | chr4_3:66150540-66150559 | Msa0656810:CDS | 25.0% |
| ! | AACTAAAGAACTCCAAAAAA+AGG | + | chr4_3:66150555-66150574 | None:intergenic | 25.0% |
| !!! | TGTTATTTTTCATAGCTTGA+AGG | - | chr4_3:66150651-66150670 | Msa0656810:CDS | 25.0% |
| !!! | GTTATTTTTCATAGCTTGAA+GGG | - | chr4_3:66150652-66150671 | Msa0656810:CDS | 25.0% |
| !!! | TTTAAGCTGTTTTTAAGCTT+TGG | - | chr4_3:66150714-66150733 | Msa0656810:five_prime_UTR | 25.0% |
| ! | AGTTTAAGCAAAATATTGAG+AGG | - | chr4_3:66150748-66150767 | Msa0656810:five_prime_UTR | 25.0% |
| !!! | ATTATTACCAAAGAGTACTT+TGG | - | chr4_3:66150797-66150816 | Msa0656810:five_prime_UTR | 25.0% |
| !!! | TTATTACCAAAGAGTACTTT+GGG | - | chr4_3:66150798-66150817 | Msa0656810:five_prime_UTR | 25.0% |
| ATGAATGATTGGAAGGTTTA+GGG | + | chr4_3:66143604-66143623 | None:intergenic | 30.0% | |
| AATGAATGATTGGAAGGTTT+AGG | + | chr4_3:66143605-66143624 | None:intergenic | 30.0% | |
| CTTAGTGGTGATACTTATTT+AGG | - | chr4_3:66143870-66143889 | Msa0656810:intron | 30.0% | |
| TCAAATAACTCAATCCAAAC+AGG | + | chr4_3:66143897-66143916 | None:intergenic | 30.0% | |
| ATAAGTTGTTTATCCAAACC+AGG | - | chr4_3:66144057-66144076 | Msa0656810:intron | 30.0% | |
| TGAATTAGATACACAGACTA+AGG | + | chr4_3:66144083-66144102 | None:intergenic | 30.0% | |
| GAATCTAATAATCCGGAATT+CGG | + | chr4_3:66144351-66144370 | None:intergenic | 30.0% | |
| TCAAAGCGAATCTAATAATC+CGG | + | chr4_3:66144358-66144377 | None:intergenic | 30.0% | |
| GATTATTAGATTCGCTTTGA+GGG | - | chr4_3:66144358-66144377 | Msa0656810:CDS | 30.0% | |
| ! | ATTGATAATTAACGTGTGAC+CGG | - | chr4_3:66144499-66144518 | Msa0656810:intron | 30.0% |
| ! | ATTGTTGGATTCTATTGGTT+TGG | - | chr4_3:66144562-66144581 | Msa0656810:intron | 30.0% |
| !! | TTGTTGGATTCTATTGGTTT+GGG | - | chr4_3:66144563-66144582 | Msa0656810:intron | 30.0% |
| AAGTTAAAGTATGTGGATCT+AGG | - | chr4_3:66144689-66144708 | Msa0656810:intron | 30.0% | |
| AGAAACAAATGCCATTCTAA+AGG | - | chr4_3:66145177-66145196 | Msa0656810:intron | 30.0% | |
| ! | ATACCTTAGTTCCTTTAGAA+TGG | + | chr4_3:66145191-66145210 | None:intergenic | 30.0% |
| GTAAAATAAGTTTCACGTTG+TGG | - | chr4_3:66145221-66145240 | Msa0656810:intron | 30.0% | |
| AAAATAAGTTTCACGTTGTG+GGG | - | chr4_3:66145223-66145242 | Msa0656810:intron | 30.0% | |
| !! | ATTTTGTTGTAGCAAAGGAT+TGG | - | chr4_3:66145279-66145298 | Msa0656810:intron | 30.0% |
| !! | TTTTGTTGTAGCAAAGGATT+GGG | - | chr4_3:66145280-66145299 | Msa0656810:intron | 30.0% |
| !!! | ATGTATCACACCTTGTTTTA+TGG | - | chr4_3:66145458-66145477 | Msa0656810:intron | 30.0% |
| ATATACAACAGGATCAATGA+TGG | - | chr4_3:66145552-66145571 | Msa0656810:intron | 30.0% | |
| GCAAACTAGTAACAATAACT+TGG | + | chr4_3:66145750-66145769 | None:intergenic | 30.0% | |
| GTGAAAAATATAGGGGAAAA+TGG | - | chr4_3:66146087-66146106 | Msa0656810:intron | 30.0% | |
| !!! | TATTAGAGGATAGTTTTGGA+GGG | + | chr4_3:66146236-66146255 | None:intergenic | 30.0% |
| TACAAAATCTTCCTCATTTG+GGG | + | chr4_3:66146300-66146319 | None:intergenic | 30.0% | |
| GATACAAAATCTTCCTCATT+TGG | + | chr4_3:66146302-66146321 | None:intergenic | 30.0% | |
| ACGAAATAAAGGACATTGAA+GGG | + | chr4_3:66146356-66146375 | None:intergenic | 30.0% | |
| ! | CAACTTCTTTTACTAGAAGA+AGG | + | chr4_3:66146490-66146509 | None:intergenic | 30.0% |
| TTTCAAACAAAGAATCGTGT+GGG | + | chr4_3:66146559-66146578 | None:intergenic | 30.0% | |
| ! | TTTTCAAACAAAGAATCGTG+TGG | + | chr4_3:66146560-66146579 | None:intergenic | 30.0% |
| GAGAATTGTTATCTGAATTC+TGG | - | chr4_3:66146628-66146647 | Msa0656810:CDS | 30.0% | |
| GTTGGAACAAAAAAAAAGTG+TGG | + | chr4_3:66146714-66146733 | None:intergenic | 30.0% | |
| GTGTTAATGATCAAAAAGGT+TGG | + | chr4_3:66146732-66146751 | None:intergenic | 30.0% | |
| ! | GATGGTGTTAATGATCAAAA+AGG | + | chr4_3:66146736-66146755 | None:intergenic | 30.0% |
| !! | GTTTTCTCCATTTTTCATGA+TGG | + | chr4_3:66146754-66146773 | None:intergenic | 30.0% |
| ! | TCGTAAAAGTGTAAGCTATT+GGG | + | chr4_3:66146865-66146884 | None:intergenic | 30.0% |
| ! | TTCGTAAAAGTGTAAGCTAT+TGG | + | chr4_3:66146866-66146885 | None:intergenic | 30.0% |
| ! | GCTTACACTTTTACGAAAAT+TGG | - | chr4_3:66146869-66146888 | Msa0656810:intron | 30.0% |
| !! | ACTTTTACGAAAATTGGCTT+TGG | - | chr4_3:66146875-66146894 | Msa0656810:intron | 30.0% |
| !!! | CTTTTACGAAAATTGGCTTT+GGG | - | chr4_3:66146876-66146895 | Msa0656810:intron | 30.0% |
| ATATAGGTAGATTAATCAGG+TGG | - | chr4_3:66147057-66147076 | Msa0656810:intron | 30.0% | |
| TTCAAATGGAAGCTATGAAT+TGG | - | chr4_3:66147085-66147104 | Msa0656810:intron | 30.0% | |
| !! | AGCTATGATGGTCTTATATT+CGG | + | chr4_3:66147176-66147195 | None:intergenic | 30.0% |
| TCATCATTGCTTTCTTATTC+AGG | - | chr4_3:66147289-66147308 | Msa0656810:intron | 30.0% | |
| CATAGGATGTAAGAAAACAA+GGG | + | chr4_3:66147390-66147409 | None:intergenic | 30.0% | |
| ACATAGGATGTAAGAAAACA+AGG | + | chr4_3:66147391-66147410 | None:intergenic | 30.0% | |
| AGCATAATTCTATTGTAGCA+TGG | + | chr4_3:66147430-66147449 | None:intergenic | 30.0% | |
| ATCGTTAATTTACAGGACTT+CGG | - | chr4_3:66147559-66147578 | Msa0656810:intron | 30.0% | |
| GAGCAATTTCTTTAACAAGA+TGG | - | chr4_3:66147612-66147631 | Msa0656810:intron | 30.0% | |
| TATTTCTCAATTATGACAGG+CGG | - | chr4_3:66147682-66147701 | Msa0656810:intron | 30.0% | |
| ATAAAAAACACCACCATTTC+TGG | + | chr4_3:66147797-66147816 | None:intergenic | 30.0% | |
| GAAAATGTAAATGTACCTTG+TGG | + | chr4_3:66147933-66147952 | None:intergenic | 30.0% | |
| ! | AGGTACATTTACATTTTCAC+TGG | - | chr4_3:66147935-66147954 | Msa0656810:intron | 30.0% |
| ! | GGTACATTTACATTTTCACT+GGG | - | chr4_3:66147936-66147955 | Msa0656810:intron | 30.0% |
| AAGACAGACCATTAATAGAA+AGG | + | chr4_3:66148169-66148188 | None:intergenic | 30.0% | |
| CATGAAACGAAGTAAAAACA+AGG | + | chr4_3:66148242-66148261 | None:intergenic | 30.0% | |
| ! | ACTTTTATTCTTCTCGAAAG+AGG | - | chr4_3:66148393-66148412 | Msa0656810:intron | 30.0% |
| ATTTATCTATCCAAAGCATG+TGG | - | chr4_3:66148435-66148454 | Msa0656810:intron | 30.0% | |
| CAATTTAAGCACCCAATTTA+GGG | + | chr4_3:66148560-66148579 | None:intergenic | 30.0% | |
| TCAATTTAAGCACCCAATTT+AGG | + | chr4_3:66148561-66148580 | None:intergenic | 30.0% | |
| TGGGTGCTTATTAAGTATTA+CGG | + | chr4_3:66148611-66148630 | None:intergenic | 30.0% | |
| !! | TCTCTCTCTTCATTTTTCAT+GGG | + | chr4_3:66148746-66148765 | None:intergenic | 30.0% |
| ATGAAAAATGAAGAGAGAGA+GGG | - | chr4_3:66148746-66148765 | Msa0656810:intron | 30.0% | |
| CATTGTGGAGTATAATACAT+GGG | + | chr4_3:66148804-66148823 | None:intergenic | 30.0% | |
| CATGTATTATACTCCACAAT+GGG | - | chr4_3:66148803-66148822 | Msa0656810:intron | 30.0% | |
| ATGTATTATACTCCACAATG+GGG | - | chr4_3:66148804-66148823 | Msa0656810:intron | 30.0% | |
| ATTTCATGTTCCTATCCAAA+TGG | + | chr4_3:66149102-66149121 | None:intergenic | 30.0% | |
| ATGACATGACTAATTATGGA+AGG | + | chr4_3:66149129-66149148 | None:intergenic | 30.0% | |
| ACTGATGACATGACTAATTA+TGG | + | chr4_3:66149133-66149152 | None:intergenic | 30.0% | |
| !! | ATCAAATTGGTTCGTAAATG+AGG | + | chr4_3:66149158-66149177 | None:intergenic | 30.0% |
| ! | GGTCTTATCTTCATTATATG+TGG | + | chr4_3:66149208-66149227 | None:intergenic | 30.0% |
| CCAACTAATCTTTACAAAAC+CGG | + | chr4_3:66149244-66149263 | None:intergenic | 30.0% | |
| !! | CGGTTTTGTAAAGATTAGTT+GGG | - | chr4_3:66149242-66149261 | Msa0656810:CDS | 30.0% |
| CTTTATTCTATGCAAGACTT+GGG | + | chr4_3:66149287-66149306 | None:intergenic | 30.0% | |
| TCTTTATTCTATGCAAGACT+TGG | + | chr4_3:66149288-66149307 | None:intergenic | 30.0% | |
| ACTCTTTGTAAACTCATTTC+AGG | + | chr4_3:66149316-66149335 | None:intergenic | 30.0% | |
| !! | ATACATTTGAAGTACCGATT+TGG | - | chr4_3:66149396-66149415 | Msa0656810:intron | 30.0% |
| ! | TTACATGTCTGCTTTATTCT+TGG | - | chr4_3:66149656-66149675 | Msa0656810:intron | 30.0% |
| CAAACTCTTCTAACTTATGT+GGG | - | chr4_3:66149714-66149733 | Msa0656810:intron | 30.0% | |
| AAACTCTTCTAACTTATGTG+GGG | - | chr4_3:66149715-66149734 | Msa0656810:intron | 30.0% | |
| !!! | AACTACTTTTTATCTTCCCT+AGG | + | chr4_3:66149878-66149897 | None:intergenic | 30.0% |
| AGTTTATAGAAGCAACTAAG+TGG | + | chr4_3:66150020-66150039 | None:intergenic | 30.0% | |
| ATGAGCATTATAACCAAGTT+TGG | - | chr4_3:66150100-66150119 | Msa0656810:intron | 30.0% | |
| TGAGCATTATAACCAAGTTT+GGG | - | chr4_3:66150101-66150120 | Msa0656810:intron | 30.0% | |
| GTATAATATTTGGGTCTATG+TGG | + | chr4_3:66150179-66150198 | None:intergenic | 30.0% | |
| AGACCCAAATATTATACCAT+CGG | - | chr4_3:66150182-66150201 | Msa0656810:intron | 30.0% | |
| TTGAATTCCTTGAAATTTGC+GGG | - | chr4_3:66150424-66150443 | Msa0656810:intron | 30.0% | |
| !!! | TGAAGTTTTGTTTTTGCCTA+GGG | - | chr4_3:66150467-66150486 | Msa0656810:intron | 30.0% |
| !!! | AAGGCTTGACAATTTTAGTT+TGG | - | chr4_3:66150592-66150611 | Msa0656810:CDS | 30.0% |
| GCTTTATAGGTGTAGGTAAA+GGG | + | chr4_3:66143319-66143338 | None:intergenic | 35.0% | |
| !! | TTCTATGGCTTTATAGGTGT+AGG | + | chr4_3:66143326-66143345 | None:intergenic | 35.0% |
| ! | TTCAGTGGATTCAGAGAAAT+TGG | + | chr4_3:66143507-66143526 | None:intergenic | 35.0% |
| AGCAAAGCCAATAAGTTTAG+AGG | - | chr4_3:66143765-66143784 | Msa0656810:intron | 35.0% | |
| TTAGGAGCCTCTAAACTTAT+TGG | + | chr4_3:66143775-66143794 | None:intergenic | 35.0% | |
| ATAAGTTTAGAGGCTCCTAA+AGG | - | chr4_3:66143775-66143794 | Msa0656810:intron | 35.0% | |
| TAAGTTTAGAGGCTCCTAAA+GGG | - | chr4_3:66143776-66143795 | Msa0656810:intron | 35.0% | |
| ! | TCTTCTTCCAATTAGCTTAG+TGG | - | chr4_3:66143855-66143874 | Msa0656810:intron | 35.0% |
| AGTATCACCACTAAGCTAAT+TGG | + | chr4_3:66143865-66143884 | None:intergenic | 35.0% | |
| ! | ATACTTATTTAGGGCCTGTT+TGG | - | chr4_3:66143880-66143899 | Msa0656810:intron | 35.0% |
| ! | AGCAGCTTTTTATCAACATC+AGG | + | chr4_3:66144154-66144173 | None:intergenic | 35.0% |
| ! | TGTTGATAAAAAGCTGCTTG+AGG | - | chr4_3:66144156-66144175 | Msa0656810:intron | 35.0% |
| CTTGAGGAACTTGAATCAAT+GGG | - | chr4_3:66144172-66144191 | Msa0656810:intron | 35.0% | |
| !!! | ATAAGGGCACTTCATTTTTC+TGG | - | chr4_3:66144214-66144233 | Msa0656810:intron | 35.0% |
| ATCCCAGTTGAAACTATCTT+TGG | - | chr4_3:66144303-66144322 | Msa0656810:intron | 35.0% | |
| TCCCAGTTGAAACTATCTTT+GGG | - | chr4_3:66144304-66144323 | Msa0656810:intron | 35.0% | |
| TAATAATCCGGAATTCGGTA+GGG | + | chr4_3:66144346-66144365 | None:intergenic | 35.0% | |
| GGATTATTAGATTCGCTTTG+AGG | - | chr4_3:66144357-66144376 | Msa0656810:CDS | 35.0% | |
| TCTTTATGGGTTTGCATTAC+CGG | - | chr4_3:66144399-66144418 | Msa0656810:CDS | 35.0% | |
| ! | TTGATAATTAACGTGTGACC+GGG | - | chr4_3:66144500-66144519 | Msa0656810:intron | 35.0% |
| ! | TTGCGAAGAACAAAGTATCA+AGG | - | chr4_3:66144592-66144611 | Msa0656810:intron | 35.0% |
| GTTCTCTAGATACTGAACTT+AGG | - | chr4_3:66144797-66144816 | Msa0656810:intron | 35.0% | |
| ! | CTTAGGCTTCTCTCTTTTAT+AGG | - | chr4_3:66144814-66144833 | Msa0656810:intron | 35.0% |
| AAACAGAATTGCTGTACCAA+GGG | + | chr4_3:66144910-66144929 | None:intergenic | 35.0% | |
| TAAACAGAATTGCTGTACCA+AGG | + | chr4_3:66144911-66144930 | None:intergenic | 35.0% | |
| AGATACCTGAGTGAATGATA+AGG | + | chr4_3:66145113-66145132 | None:intergenic | 35.0% | |
| !! | AGAAGCTTTAGCTTTACTGA+CGG | + | chr4_3:66145137-66145156 | None:intergenic | 35.0% |
| !! | ATTTGTTTCTTCTGGGGTAA+GGG | + | chr4_3:66145167-66145186 | None:intergenic | 35.0% |
| ! | AATGGCATTTGTTTCTTCTG+GGG | + | chr4_3:66145173-66145192 | None:intergenic | 35.0% |
| ! | GAATGGCATTTGTTTCTTCT+GGG | + | chr4_3:66145174-66145193 | None:intergenic | 35.0% |
| ! | AGAATGGCATTTGTTTCTTC+TGG | + | chr4_3:66145175-66145194 | None:intergenic | 35.0% |
| ! | ATGCCATTCTAAAGGAACTA+AGG | - | chr4_3:66145185-66145204 | Msa0656810:intron | 35.0% |
| ! | TTTGTTGTAGCAAAGGATTG+GGG | - | chr4_3:66145281-66145300 | Msa0656810:intron | 35.0% |
| ! | CAATTATTGTTGAGGCATTC+TGG | - | chr4_3:66145380-66145399 | Msa0656810:intron | 35.0% |
| !!! | ATCACACCTTGTTTTATGGA+TGG | - | chr4_3:66145462-66145481 | Msa0656810:intron | 35.0% |
| CAAAGACCATCCATAAAACA+AGG | + | chr4_3:66145471-66145490 | None:intergenic | 35.0% | |
| GTGTTCTTTATCATTGCATG+CGG | - | chr4_3:66145511-66145530 | Msa0656810:intron | 35.0% | |
| TGTTCTTTATCATTGCATGC+GGG | - | chr4_3:66145512-66145531 | Msa0656810:intron | 35.0% | |
| ACATGCCCTTAATATACAAC+AGG | - | chr4_3:66145541-66145560 | Msa0656810:intron | 35.0% | |
| AGCTATAATCTTAAGGGAGA+AGG | - | chr4_3:66145787-66145806 | Msa0656810:intron | 35.0% | |
| AGAAGAAGAAGAGAAGAGAA+TGG | - | chr4_3:66145823-66145842 | Msa0656810:intron | 35.0% | |
| AATGGAGAGAGAAAGAGAAA+AGG | - | chr4_3:66145841-66145860 | Msa0656810:intron | 35.0% | |
| TGAAACTCAATGAGATGAGT+GGG | + | chr4_3:66145893-66145912 | None:intergenic | 35.0% | |
| CGTCTATGAGTTTATGCTTT+GGG | - | chr4_3:66146002-66146021 | Msa0656810:intron | 35.0% | |
| GTCTATGAGTTTATGCTTTG+GGG | - | chr4_3:66146003-66146022 | Msa0656810:intron | 35.0% | |
| TTTGGGGATAGTTGATCTTA+AGG | - | chr4_3:66146019-66146038 | Msa0656810:intron | 35.0% | |
| !! | TAAGGCTTTGTTTGAGAGTT+CGG | - | chr4_3:66146037-66146056 | Msa0656810:intron | 35.0% |
| ! | CTTTGGGGGTGAAAAATATA+GGG | - | chr4_3:66146079-66146098 | Msa0656810:intron | 35.0% |
| TTTGGGGGTGAAAAATATAG+GGG | - | chr4_3:66146080-66146099 | Msa0656810:intron | 35.0% | |
| !!! | GTATTAGAGGATAGTTTTGG+AGG | + | chr4_3:66146237-66146256 | None:intergenic | 35.0% |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | - | chr4_3:66146286-66146305 | Msa0656810:intron | 35.0% |
| ACAAAATCTTCCTCATTTGG+GGG | + | chr4_3:66146299-66146318 | None:intergenic | 35.0% | |
| CGAAATAAAGGACATTGAAG+GGG | + | chr4_3:66146355-66146374 | None:intergenic | 35.0% | |
| GACGAAATAAAGGACATTGA+AGG | + | chr4_3:66146357-66146376 | None:intergenic | 35.0% | |
| !! | AAAGAAGTTGAGTTTTGGCA+CGG | - | chr4_3:66146500-66146519 | Msa0656810:intron | 35.0% |
| GTATTGCTTAATAGGTAGTC+AGG | - | chr4_3:66146912-66146931 | Msa0656810:intron | 35.0% | |
| GTCAGGTAGATAAGTTCAAA+TGG | - | chr4_3:66146929-66146948 | Msa0656810:intron | 35.0% | |
| !! | CAAATGGAAGCGCTATAAAT+TGG | - | chr4_3:66146945-66146964 | Msa0656810:intron | 35.0% |
| ATCAGGTGGATAAGTTCAAA+TGG | - | chr4_3:66147071-66147090 | Msa0656810:intron | 35.0% | |
| !! | TATGATGGTCTTATATTCGG+GGG | + | chr4_3:66147173-66147192 | None:intergenic | 35.0% |
| !! | CTATGATGGTCTTATATTCG+GGG | + | chr4_3:66147174-66147193 | None:intergenic | 35.0% |
| !! | GCTATGATGGTCTTATATTC+GGG | + | chr4_3:66147175-66147194 | None:intergenic | 35.0% |
| GAATGACTTCTCAGATATTG+AGG | + | chr4_3:66147266-66147285 | None:intergenic | 35.0% | |
| AAGAAGACAACGAGAGAAAA+CGG | - | chr4_3:66147357-66147376 | Msa0656810:intron | 35.0% | |
| ! | AGAATTATGCTTCCTTTTGC+AGG | - | chr4_3:66147439-66147458 | Msa0656810:intron | 35.0% |
| AGAGAGAATCAAGCAAAAGT+TGG | - | chr4_3:66147509-66147528 | Msa0656810:intron | 35.0% | |
| AACAAATTGACGACTGTCAT+TGG | - | chr4_3:66147638-66147657 | Msa0656810:intron | 35.0% | |
| ACAAATTGACGACTGTCATT+GGG | - | chr4_3:66147639-66147658 | Msa0656810:intron | 35.0% | |
| AAGAAGACGAAAACTTGGAT+TGG | - | chr4_3:66147706-66147725 | Msa0656810:intron | 35.0% | |
| GGTATTATCTTGTCCAGAAA+TGG | - | chr4_3:66147781-66147800 | Msa0656810:intron | 35.0% | |
| ATTATCTTGTCCAGAAATGG+TGG | - | chr4_3:66147784-66147803 | Msa0656810:intron | 35.0% | |
| ! | ACATTTACATTTTCACTGGG+TGG | - | chr4_3:66147939-66147958 | Msa0656810:intron | 35.0% |
| ! | CATTTACATTTTCACTGGGT+GGG | - | chr4_3:66147940-66147959 | Msa0656810:intron | 35.0% |
| ATAACGGTGAATAATGTAGG+AGG | - | chr4_3:66148040-66148059 | Msa0656810:intron | 35.0% | |
| TTACGGTAAAATGAGTGATG+TGG | + | chr4_3:66148594-66148613 | None:intergenic | 35.0% | |
| !! | CTCTCTCTCTTCATTTTTCA+TGG | + | chr4_3:66148747-66148766 | None:intergenic | 35.0% |
| CATGAAAAATGAAGAGAGAG+AGG | - | chr4_3:66148745-66148764 | Msa0656810:intron | 35.0% | |
| GTATAATACATGGGTGGTTA+TGG | + | chr4_3:66148795-66148814 | None:intergenic | 35.0% | |
| CCATTGTGGAGTATAATACA+TGG | + | chr4_3:66148805-66148824 | None:intergenic | 35.0% | |
| CCATGTATTATACTCCACAA+TGG | - | chr4_3:66148802-66148821 | Msa0656810:intron | 35.0% | |
| TGTATTATACTCCACAATGG+GGG | - | chr4_3:66148805-66148824 | Msa0656810:intron | 35.0% | |
| TCTTCATTATATGTGGGACT+TGG | + | chr4_3:66149201-66149220 | None:intergenic | 35.0% | |
| CTAATCTTTACAAAACCGGT+TGG | + | chr4_3:66149240-66149259 | None:intergenic | 35.0% | |
| !! | CCGGTTTTGTAAAGATTAGT+TGG | - | chr4_3:66149241-66149260 | Msa0656810:CDS | 35.0% |
| GCAGACATGTAAATATGCAA+AGG | + | chr4_3:66149648-66149667 | None:intergenic | 35.0% | |
| CCACATAAGTTAGAAGAGTT+TGG | + | chr4_3:66149716-66149735 | None:intergenic | 35.0% | |
| CCAAACTCTTCTAACTTATG+TGG | - | chr4_3:66149713-66149732 | Msa0656810:intron | 35.0% | |
| ! | TTTTTCTTCAGCAGGATTTC+TGG | + | chr4_3:66149748-66149767 | None:intergenic | 35.0% |
| ATCCTGCTGAAGAAAAATTC+AGG | - | chr4_3:66149751-66149770 | Msa0656810:intron | 35.0% | |
| ! | TTCCTGAATTTTTCTTCAGC+AGG | + | chr4_3:66149756-66149775 | None:intergenic | 35.0% |
| GGTAAGAAAATCCGTTAAGA+TGG | - | chr4_3:66149803-66149822 | Msa0656810:intron | 35.0% | |
| ! | CTTTGTACTTTGGCATTTTC+AGG | - | chr4_3:66149830-66149849 | Msa0656810:intron | 35.0% |
| AGTGTAGCTACTAATACCTA+GGG | - | chr4_3:66149859-66149878 | Msa0656810:intron | 35.0% | |
| !! | CCGAATTTCAGAGTTTTGAT+CGG | + | chr4_3:66150079-66150098 | None:intergenic | 35.0% |
| !! | CCGATCAAAACTCTGAAATT+CGG | - | chr4_3:66150076-66150095 | Msa0656810:intron | 35.0% |
| !! | CGATCAAAACTCTGAAATTC+GGG | - | chr4_3:66150077-66150096 | Msa0656810:intron | 35.0% |
| AATATTTGGGTCTATGTGGT+GGG | + | chr4_3:66150175-66150194 | None:intergenic | 35.0% | |
| TAATATTTGGGTCTATGTGG+TGG | + | chr4_3:66150176-66150195 | None:intergenic | 35.0% | |
| GACCCAAATATTATACCATC+GGG | - | chr4_3:66150183-66150202 | Msa0656810:intron | 35.0% | |
| CACCCGATGGTATAATATTT+GGG | + | chr4_3:66150188-66150207 | None:intergenic | 35.0% | |
| ACACCCGATGGTATAATATT+TGG | + | chr4_3:66150189-66150208 | None:intergenic | 35.0% | |
| GTGCATATGATGTGTTTAAC+AGG | - | chr4_3:66150374-66150393 | Msa0656810:CDS | 35.0% | |
| TGTGTTTAACAGGAAAGAGT+TGG | - | chr4_3:66150384-66150403 | Msa0656810:CDS | 35.0% | |
| !!! | GTGAAGTTTTGTTTTTGCCT+AGG | - | chr4_3:66150466-66150485 | Msa0656810:intron | 35.0% |
| ! | GGCTTTATAGGTGTAGGTAA+AGG | + | chr4_3:66143320-66143339 | None:intergenic | 40.0% |
| GGTGGATCCAATTGGTATAT+TGG | + | chr4_3:66143372-66143391 | None:intergenic | 40.0% | |
| TTGCGGTACTCTCTTGAAAT+CGG | - | chr4_3:66143442-66143461 | Msa0656810:three_prime_UTR | 40.0% | |
| TTCAGAGAAATTGGAGTGTG+AGG | + | chr4_3:66143498-66143517 | None:intergenic | 40.0% | |
| ! | TGATTGGAAGGTTTAGGGTT+TGG | + | chr4_3:66143599-66143618 | None:intergenic | 40.0% |
| GATTTACACACCAAGAGAAC+TGG | - | chr4_3:66143709-66143728 | Msa0656810:intron | 40.0% | |
| !! | ACTTATTGGCTTTGCTGCTT+CGG | + | chr4_3:66143761-66143780 | None:intergenic | 40.0% |
| TGGGATTCTGAATTCCCTTT+AGG | + | chr4_3:66143793-66143812 | None:intergenic | 40.0% | |
| GGAACTAGTGATCAGAATGA+AGG | - | chr4_3:66143820-66143839 | Msa0656810:intron | 40.0% | |
| GCTTGAGGAACTTGAATCAA+TGG | - | chr4_3:66144171-66144190 | Msa0656810:intron | 40.0% | |
| ! | AATGAAGTGCCCTTATTGCA+CGG | + | chr4_3:66144210-66144229 | None:intergenic | 40.0% |
| GCCCAAAGATAGTTTCAACT+GGG | + | chr4_3:66144308-66144327 | None:intergenic | 40.0% | |
| TGCCCAAAGATAGTTTCAAC+TGG | + | chr4_3:66144309-66144328 | None:intergenic | 40.0% | |
| CTAATAATCCGGAATTCGGT+AGG | + | chr4_3:66144347-66144366 | None:intergenic | 40.0% | |
| CATCAGTTTATACCGCTTGA+AGG | - | chr4_3:66144523-66144542 | Msa0656810:intron | 40.0% | |
| !! | TGGATTCTATTGGTTTGGGT+TGG | - | chr4_3:66144567-66144586 | Msa0656810:intron | 40.0% |
| !! | GGATTCTATTGGTTTGGGTT+GGG | - | chr4_3:66144568-66144587 | Msa0656810:intron | 40.0% |
| !! | AAGGGCATTTCATCTATGTC+AGG | + | chr4_3:66144892-66144911 | None:intergenic | 40.0% |
| TGACATAGATGAAATGCCCT+TGG | - | chr4_3:66144891-66144910 | Msa0656810:intron | 40.0% | |
| ATGATAAGGTCAGAAGGTAG+AGG | + | chr4_3:66145099-66145118 | None:intergenic | 40.0% | |
| GAGTGAATGATAAGGTCAGA+AGG | + | chr4_3:66145105-66145124 | None:intergenic | 40.0% | |
| TCTGACCTTATCATTCACTC+AGG | - | chr4_3:66145105-66145124 | Msa0656810:intron | 40.0% | |
| !! | CATTTGTTTCTTCTGGGGTA+AGG | + | chr4_3:66145168-66145187 | None:intergenic | 40.0% |
| ! | ACGCAAGCATGTGTTATTGT+AGG | + | chr4_3:66145687-66145706 | None:intergenic | 40.0% |
| TGAGATGAGTGGGAAACAAA+GGG | + | chr4_3:66145883-66145902 | None:intergenic | 40.0% | |
| ATGAGATGAGTGGGAAACAA+AGG | + | chr4_3:66145884-66145903 | None:intergenic | 40.0% | |
| CTGAAACTCAATGAGATGAG+TGG | + | chr4_3:66145894-66145913 | None:intergenic | 40.0% | |
| AACAAAGTTTACGCACATGC+TGG | + | chr4_3:66145966-66145985 | None:intergenic | 40.0% | |
| AAGCATAAACTCATAGACGC+AGG | + | chr4_3:66146001-66146020 | None:intergenic | 40.0% | |
| GCGTCTATGAGTTTATGCTT+TGG | - | chr4_3:66146001-66146020 | Msa0656810:intron | 40.0% | |
| !! | GCTTTGGGGGTGAAAAATAT+AGG | - | chr4_3:66146078-66146097 | Msa0656810:intron | 40.0% |
| ACATTGAAGGGGAGAACTTT+GGG | + | chr4_3:66146344-66146363 | None:intergenic | 40.0% | |
| GAAGCAAGTGGACGAAATAA+AGG | + | chr4_3:66146367-66146386 | None:intergenic | 40.0% | |
| TTTGCGAGTTCAAAGGGTAA+GGG | + | chr4_3:66146415-66146434 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGCGAGTTCAAA+GGG | + | chr4_3:66146421-66146440 | None:intergenic | 40.0% |
| ACAAGTACCAAGCTCTTAAC+TGG | + | chr4_3:66146462-66146481 | None:intergenic | 40.0% | |
| !! | AGTTTTGGCACGGTATATTG+AGG | - | chr4_3:66146510-66146529 | Msa0656810:intron | 40.0% |
| ! | ATATGCGAGTATCGCTTACT+AGG | - | chr4_3:66146601-66146620 | Msa0656810:CDS | 40.0% |
| !! | CTGCGAGAGTATTGTTGAAT+AGG | + | chr4_3:66146836-66146855 | None:intergenic | 40.0% |
| ATTCATGAGAATCACGACGT+GGG | + | chr4_3:66147034-66147053 | None:intergenic | 40.0% | |
| TATTCATGAGAATCACGACG+TGG | + | chr4_3:66147035-66147054 | None:intergenic | 40.0% | |
| ATTCAGGAGAGAATTCGAGT+CGG | - | chr4_3:66147305-66147324 | Msa0656810:intron | 40.0% | |
| CAAAGCTAACAACCTGCAAA+AGG | + | chr4_3:66147454-66147473 | None:intergenic | 40.0% | |
| !! | TTTGCAGGTTGTTAGCTTTG+AGG | - | chr4_3:66147454-66147473 | Msa0656810:intron | 40.0% |
| TTTGAGGAAAGCAGAGAAAG+AGG | - | chr4_3:66147470-66147489 | Msa0656810:intron | 40.0% | |
| GCAAAAGTTGGAAGAAGACA+AGG | - | chr4_3:66147521-66147540 | Msa0656810:intron | 40.0% | |
| CAAATTGACGACTGTCATTG+GGG | - | chr4_3:66147640-66147659 | Msa0656810:intron | 40.0% | |
| AAATTGACGACTGTCATTGG+GGG | - | chr4_3:66147641-66147660 | Msa0656810:intron | 40.0% | |
| AGCTGTTGTAGAGGAGAAAA+AGG | - | chr4_3:66147760-66147779 | Msa0656810:intron | 40.0% | |
| GAAATATGAGAAGAGGGAGA+CGG | - | chr4_3:66148291-66148310 | Msa0656810:CDS | 40.0% | |
| ATAGGCCTGAGTAATAACGA+CGG | - | chr4_3:66148318-66148337 | Msa0656810:intron | 40.0% | |
| CAGAAGAAAACCACATGCTT+TGG | + | chr4_3:66148448-66148467 | None:intergenic | 40.0% | |
| ! | CAAAGCATGTGGTTTTCTTC+TGG | - | chr4_3:66148446-66148465 | Msa0656810:intron | 40.0% |
| !! | ATGTGGTTTTCTTCTGGAGA+TGG | - | chr4_3:66148452-66148471 | Msa0656810:intron | 40.0% |
| ! | ACAACAGAGCACCCTAAATT+GGG | - | chr4_3:66148546-66148565 | Msa0656810:intron | 40.0% |
| !!! | TTTCTTTTAAGGTGCTGGGT+TGG | + | chr4_3:66148640-66148659 | None:intergenic | 40.0% |
| TGTGGAGTATAATACATGGG+TGG | + | chr4_3:66148801-66148820 | None:intergenic | 40.0% | |
| TCAACGCACTAGCTGTAAAT+TGG | + | chr4_3:66148998-66149017 | None:intergenic | 40.0% | |
| TCATGTTCCTATCCAAATGG+AGG | + | chr4_3:66149099-66149118 | None:intergenic | 40.0% | |
| !! | AAAACCGGTTGGTAAAGTGA+GGG | + | chr4_3:66149229-66149248 | None:intergenic | 40.0% |
| CTAACTCATCCTCACAAAAC+CGG | + | chr4_3:66149358-66149377 | None:intergenic | 40.0% | |
| !! | CATTTGAAGTACCGATTTGG+TGG | - | chr4_3:66149399-66149418 | Msa0656810:intron | 40.0% |
| GGAATGATTTGACGTCACAT+AGG | - | chr4_3:66149441-66149460 | Msa0656810:intron | 40.0% | |
| GAAAAGCTGCGTTACTAAGA+CGG | + | chr4_3:66149782-66149801 | None:intergenic | 40.0% | |
| ! | TCTTAGTAACGCAGCTTTTC+AGG | - | chr4_3:66149782-66149801 | Msa0656810:intron | 40.0% |
| CAGTGTAGCTACTAATACCT+AGG | - | chr4_3:66149858-66149877 | Msa0656810:intron | 40.0% | |
| GAAGAGATCTATAGGCTGTT+TGG | - | chr4_3:66149919-66149938 | Msa0656810:CDS | 40.0% | |
| !! | TTCAGAGTTTTGATCGGACT+GGG | + | chr4_3:66150073-66150092 | None:intergenic | 40.0% |
| !! | TTTCAGAGTTTTGATCGGAC+TGG | + | chr4_3:66150074-66150093 | None:intergenic | 40.0% |
| ! | TTCTCGTCTAAAGCTACATC+AGG | - | chr4_3:66150279-66150298 | Msa0656810:CDS | 40.0% |
| ! | TCTCGTCTAAAGCTACATCA+GGG | - | chr4_3:66150280-66150299 | Msa0656810:CDS | 40.0% |
| !! | GAAAGAGTTGGTGCTTTGAA+AGG | - | chr4_3:66150396-66150415 | Msa0656810:CDS | 40.0% |
| TCTCAAACCCGCAAATTTCA+AGG | + | chr4_3:66150434-66150453 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTTGCCTAGGGAGA+AGG | - | chr4_3:66150473-66150492 | Msa0656810:intron | 40.0% |
| ATTGCAGTCCTAAATTCAGC+TGG | - | chr4_3:66150501-66150520 | Msa0656810:intron | 40.0% | |
| GTTCAGATCCAGCTGAATTT+AGG | + | chr4_3:66150512-66150531 | None:intergenic | 40.0% | |
| !!! | CCTTGTGTCGTTACTTTTTG+CGG | - | chr4_3:66150691-66150710 | Msa0656810:exon | 40.0% |
| GTGTAGGTAAAGGGTGAGAA+GGG | + | chr4_3:66143310-66143329 | None:intergenic | 45.0% | |
| ATTCCGGTGATTCGTTTCGT+CGG | + | chr4_3:66143393-66143412 | None:intergenic | 45.0% | |
| CGAAACGAATCACCGGAATA+TGG | - | chr4_3:66143394-66143413 | Msa0656810:three_prime_UTR | 45.0% | |
| !!! | ATTACGGTTTTGGATCGGCA+AGG | + | chr4_3:66143566-66143585 | None:intergenic | 45.0% |
| TTCAGTGTGTCCAGTTCTCT+TGG | + | chr4_3:66143722-66143741 | None:intergenic | 45.0% | |
| AGGGAATTCAGAATCCCAAG+AGG | - | chr4_3:66143795-66143814 | Msa0656810:intron | 45.0% | |
| GGGAATTCAGAATCCCAAGA+GGG | - | chr4_3:66143796-66143815 | Msa0656810:intron | 45.0% | |
| AATTCAGAATCCCAAGAGGG+TGG | - | chr4_3:66143799-66143818 | Msa0656810:intron | 45.0% | |
| ATCACTAGTTCCACCCTCTT+GGG | + | chr4_3:66143812-66143831 | None:intergenic | 45.0% | |
| TAGATACACAGACTAAGGCC+TGG | + | chr4_3:66144078-66144097 | None:intergenic | 45.0% | |
| TTTCAACAGCCCGTGCAATA+AGG | - | chr4_3:66144197-66144216 | Msa0656810:intron | 45.0% | |
| TTCAACAGCCCGTGCAATAA+GGG | - | chr4_3:66144198-66144217 | Msa0656810:intron | 45.0% | |
| ! | ATGAAGTGCCCTTATTGCAC+GGG | + | chr4_3:66144209-66144228 | None:intergenic | 45.0% |
| AAGCGGTATAAACTGATGCC+CGG | + | chr4_3:66144521-66144540 | None:intergenic | 45.0% | |
| ! | TATAGGTAACACTAGCCTCG+AGG | - | chr4_3:66144831-66144850 | Msa0656810:intron | 45.0% |
| ACATGTACTGCGAATGACTG+AGG | + | chr4_3:66145651-66145670 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGAGAGTTCGGA+GGG | - | chr4_3:66146041-66146060 | Msa0656810:intron | 45.0% |
| ! | CTTTGTTTGAGAGTTCGGAG+GGG | - | chr4_3:66146042-66146061 | Msa0656810:intron | 45.0% |
| CATTGAAGGGGAGAACTTTG+GGG | + | chr4_3:66146343-66146362 | None:intergenic | 45.0% | |
| GACATTGAAGGGGAGAACTT+TGG | + | chr4_3:66146345-66146364 | None:intergenic | 45.0% | |
| GGGAAAAAGGAAGAAGCAAG+TGG | + | chr4_3:66146379-66146398 | None:intergenic | 45.0% | |
| !!! | AAGGGAGGGTTTTGGGAAAA+AGG | + | chr4_3:66146392-66146411 | None:intergenic | 45.0% |
| GAGTTCAAAGGGTAAGGGAA+GGG | + | chr4_3:66146410-66146429 | None:intergenic | 45.0% | |
| GTTTGCGAGTTCAAAGGGTA+AGG | + | chr4_3:66146416-66146435 | None:intergenic | 45.0% | |
| !! | GGCTTTGTTTGCGAGTTCAA+AGG | + | chr4_3:66146422-66146441 | None:intergenic | 45.0% |
| GTGGGGAGATTTCTCTATGT+AGG | + | chr4_3:66147141-66147160 | None:intergenic | 45.0% | |
| ATTCGGGGGAATCATGATGT+GGG | + | chr4_3:66147159-66147178 | None:intergenic | 45.0% | |
| TATTCGGGGGAATCATGATG+TGG | + | chr4_3:66147160-66147179 | None:intergenic | 45.0% | |
| AGGAGTTGCTTGAAGCAAAG+AGG | - | chr4_3:66147330-66147349 | Msa0656810:intron | 45.0% | |
| AGAGAAAGAGGAAGAGCGAA+GGG | - | chr4_3:66147482-66147501 | Msa0656810:intron | 45.0% | |
| GCGGAAAGAAGACGAAAACT+TGG | - | chr4_3:66147701-66147720 | Msa0656810:intron | 45.0% | |
| !! | AAAACTTGGATTGGCTCCAG+AGG | - | chr4_3:66147715-66147734 | Msa0656810:intron | 45.0% |
| TGCAGAGTTTCCTGCCAATT+AGG | - | chr4_3:66147854-66147873 | Msa0656810:intron | 45.0% | |
| TTCTCTCAAGCAGAACCACA+AGG | - | chr4_3:66147915-66147934 | Msa0656810:intron | 45.0% | |
| TCATCTGCCTAGTTCAGTGT+AGG | - | chr4_3:66147973-66147992 | Msa0656810:intron | 45.0% | |
| TCACTTGCCTACACTGAACT+AGG | + | chr4_3:66147983-66148002 | None:intergenic | 45.0% | |
| ! | AAGTGCCGTCGTTATTACTC+AGG | + | chr4_3:66148326-66148345 | None:intergenic | 45.0% |
| ! | GTGGATGGTCTTAGCTAACT+AGG | + | chr4_3:66148528-66148547 | None:intergenic | 45.0% |
| ! | CAATTTAGGGTGCTCTGTTG+TGG | + | chr4_3:66148547-66148566 | None:intergenic | 45.0% |
| ! | CACAACAGAGCACCCTAAAT+TGG | - | chr4_3:66148545-66148564 | Msa0656810:intron | 45.0% |
| ACATGGGTGGTTATGGAGAA+GGG | + | chr4_3:66148788-66148807 | None:intergenic | 45.0% | |
| TACATGGGTGGTTATGGAGA+AGG | + | chr4_3:66148789-66148808 | None:intergenic | 45.0% | |
| TTAAATAGGCACCCCCATTG+TGG | + | chr4_3:66148819-66148838 | None:intergenic | 45.0% | |
| !! | ATGGGGGTGCCTATTTAATG+TGG | - | chr4_3:66148821-66148840 | Msa0656810:intron | 45.0% |
| ATCCATATCGGTCCTCCATT+TGG | - | chr4_3:66149084-66149103 | Msa0656810:intron | 45.0% | |
| ATCCAAATGGAGGACCGATA+TGG | + | chr4_3:66149089-66149108 | None:intergenic | 45.0% | |
| TATCGGTCCTCCATTTGGAT+AGG | - | chr4_3:66149089-66149108 | Msa0656810:intron | 45.0% | |
| AAGACCCTCACTTTACCAAC+CGG | - | chr4_3:66149222-66149241 | Msa0656810:CDS | 45.0% | |
| !! | CAAAACCGGTTGGTAAAGTG+AGG | + | chr4_3:66149230-66149249 | None:intergenic | 45.0% |
| ! | GATTAGTTGGGCGTGAGTAT+TGG | - | chr4_3:66149254-66149273 | Msa0656810:CDS | 45.0% |
| !! | AAAACCGGCTTGCAAAATGG+AGG | + | chr4_3:66149343-66149362 | None:intergenic | 45.0% |
| !! | CACAAAACCGGCTTGCAAAA+TGG | + | chr4_3:66149346-66149365 | None:intergenic | 45.0% |
| !! | TTTTGCAAGCCGGTTTTGTG+AGG | - | chr4_3:66149346-66149365 | Msa0656810:intron | 45.0% |
| GGCAGCGAATGTGACATTTA+TGG | - | chr4_3:66149420-66149439 | Msa0656810:intron | 45.0% | |
| ! | GTCTGCTTTATTCTTGGAGC+AGG | - | chr4_3:66149662-66149681 | Msa0656810:intron | 45.0% |
| TTGGAATGCTCTCTTCACTC+TGG | + | chr4_3:66149697-66149716 | None:intergenic | 45.0% | |
| TACAAAGCGCGCCATCTTAA+CGG | + | chr4_3:66149817-66149836 | None:intergenic | 45.0% | |
| TCTCAAACTCACGTCTAGAG+TGG | - | chr4_3:66149956-66149975 | Msa0656810:CDS | 45.0% | |
| ! | TTGATCGGACTGGGTATGTA+GGG | + | chr4_3:66150064-66150083 | None:intergenic | 45.0% |
| ! | TTTGATCGGACTGGGTATGT+AGG | + | chr4_3:66150065-66150084 | None:intergenic | 45.0% |
| CATCGGGTGTATCAGTTTCA+GGG | - | chr4_3:66150199-66150218 | Msa0656810:intron | 45.0% | |
| ATCGGGTGTATCAGTTTCAG+GGG | - | chr4_3:66150200-66150219 | Msa0656810:intron | 45.0% | |
| !! | AGAGTTGGTGCTTTGAAAGG+AGG | - | chr4_3:66150399-66150418 | Msa0656810:intron | 45.0% |
| GCAATATCAACCTTCTCCCT+AGG | + | chr4_3:66150486-66150505 | None:intergenic | 45.0% | |
| CCGCAAAAAGTAACGACACA+AGG | + | chr4_3:66150694-66150713 | None:intergenic | 45.0% | |
| ! | GAGCTTCCCAAAGTACTCTT+TGG | + | chr4_3:66150807-66150826 | None:intergenic | 45.0% |
| !!! | TTTTATTAAGATTTATTAAA+TGG | - | chr4_3:66148718-66148737 | Msa0656810:intron | 5.0% |
| !! | TTTATTAAGATTTATTAAAT+GGG | - | chr4_3:66148719-66148738 | Msa0656810:intron | 5.0% |
| GGTGTAGGTAAAGGGTGAGA+AGG | + | chr4_3:66143311-66143330 | None:intergenic | 50.0% | |
| GTTTCGTCGGTGGATCCAAT+TGG | + | chr4_3:66143380-66143399 | None:intergenic | 50.0% | |
| ACGAATCACCGGAATATGGC+AGG | - | chr4_3:66143398-66143417 | Msa0656810:three_prime_UTR | 50.0% | |
| CGAATCACCGGAATATGGCA+GGG | - | chr4_3:66143399-66143418 | Msa0656810:three_prime_UTR | 50.0% | |
| GAATCACCGGAATATGGCAG+GGG | - | chr4_3:66143400-66143419 | Msa0656810:three_prime_UTR | 50.0% | |
| !!! | GGTTTTGGATCGGCAAGGTT+TGG | + | chr4_3:66143561-66143580 | None:intergenic | 50.0% |
| GATCACTAGTTCCACCCTCT+TGG | + | chr4_3:66143813-66143832 | None:intergenic | 50.0% | |
| ACACAGACTAAGGCCTGGTT+TGG | + | chr4_3:66144073-66144092 | None:intergenic | 50.0% | |
| CTTACCTCCCTACCGAATTC+CGG | - | chr4_3:66144336-66144355 | Msa0656810:CDS | 50.0% | |
| TAATCCGGAATTCGGTAGGG+AGG | + | chr4_3:66144343-66144362 | None:intergenic | 50.0% | |
| TGCTGTGGCGCAATAATGAC+CGG | + | chr4_3:66144421-66144440 | None:intergenic | 50.0% | |
| CTATGTCAGGCGTATTCTCG+TGG | + | chr4_3:66144879-66144898 | None:intergenic | 50.0% | |
| !! | GTTTCTTCTGGGGTAAGGGA+GGG | + | chr4_3:66145163-66145182 | None:intergenic | 50.0% |
| !! | TGTTTCTTCTGGGGTAAGGG+AGG | + | chr4_3:66145164-66145183 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGAGAGTTCGG+AGG | - | chr4_3:66146040-66146059 | Msa0656810:intron | 50.0% |
| ! | GTAAGGGAAGGGAGGGTTTT+GGG | + | chr4_3:66146399-66146418 | None:intergenic | 50.0% |
| TCAAAGGGTAAGGGAAGGGA+GGG | + | chr4_3:66146406-66146425 | None:intergenic | 50.0% | |
| TTCAAAGGGTAAGGGAAGGG+AGG | + | chr4_3:66146407-66146426 | None:intergenic | 50.0% | |
| CGAGTTCAAAGGGTAAGGGA+AGG | + | chr4_3:66146411-66146430 | None:intergenic | 50.0% | |
| CTGGCTGAGCATAGAGTCTT+AGG | + | chr4_3:66146443-66146462 | None:intergenic | 50.0% | |
| TGCTCAGCCAGTTAAGAGCT+TGG | - | chr4_3:66146452-66146471 | Msa0656810:intron | 50.0% | |
| TTCGGGGGAATCATGATGTG+GGG | + | chr4_3:66147158-66147177 | None:intergenic | 50.0% | |
| GGAGAGAATTCGAGTCGGTA+AGG | - | chr4_3:66147310-66147329 | Msa0656810:intron | 50.0% | |
| CAGAGAAAGAGGAAGAGCGA+AGG | - | chr4_3:66147481-66147500 | Msa0656810:intron | 50.0% | |
| TTCTCCTCTACAACAGCTGC+AGG | + | chr4_3:66147758-66147777 | None:intergenic | 50.0% | |
| !! | GTTTTGGTGGCAGGCCTAAT+TGG | + | chr4_3:66147871-66147890 | None:intergenic | 50.0% |
| CACCAAAACCGAGCAGATGA+GGG | - | chr4_3:66147882-66147901 | Msa0656810:intron | 50.0% | |
| TTTCACTGGGTGGGATTCTG+TGG | - | chr4_3:66147949-66147968 | Msa0656810:intron | 50.0% | |
| CAGTGTAGGCAAGTGACTGT+TGG | - | chr4_3:66147987-66148006 | Msa0656810:intron | 50.0% | |
| ! | TTCTGGAGATGGAGTCACTG+AGG | - | chr4_3:66148463-66148482 | Msa0656810:intron | 50.0% |
| TCTGGAGATGGAGTCACTGA+GGG | - | chr4_3:66148464-66148483 | Msa0656810:intron | 50.0% | |
| ! | TTAGGGTGCTCTGTTGTGGA+TGG | + | chr4_3:66148543-66148562 | None:intergenic | 50.0% |
| ! | GGTGCTGGGTTGGAGAAAAT+GGG | + | chr4_3:66148630-66148649 | None:intergenic | 50.0% |
| !! | AGGTGCTGGGTTGGAGAAAA+TGG | + | chr4_3:66148631-66148650 | None:intergenic | 50.0% |
| GTTATGGAGAAGGGTGGCTA+TGG | + | chr4_3:66148779-66148798 | None:intergenic | 50.0% | |
| CCAAGACCATCCACAATGGT+GGG | + | chr4_3:66148865-66148884 | None:intergenic | 50.0% | |
| AACGCCAAGACCATCCACAA+TGG | + | chr4_3:66148869-66148888 | None:intergenic | 50.0% | |
| ! | ATTGTGGATGGTCTTGGCGT+TGG | - | chr4_3:66148868-66148887 | Msa0656810:intron | 50.0% |
| ! | GACACCTCCATTTTGCAAGC+CGG | - | chr4_3:66149336-66149355 | Msa0656810:intron | 50.0% |
| CACATTCGCTGCCACCAAAT+CGG | + | chr4_3:66149413-66149432 | None:intergenic | 50.0% | |
| GACGTCACATAGGTGCTTGA+AGG | - | chr4_3:66149451-66149470 | Msa0656810:intron | 50.0% | |
| AGATGGCGCGCTTTGTACTT+TGG | - | chr4_3:66149820-66149839 | Msa0656810:intron | 50.0% | |
| TGGGTATGTAGGGCGTGTAT+TGG | + | chr4_3:66150054-66150073 | None:intergenic | 50.0% | |
| ACTCAAAGGGGTCCCAAACT+TGG | + | chr4_3:66150116-66150135 | None:intergenic | 50.0% | |
| CCTGAAACTGATACACCCGA+TGG | + | chr4_3:66150201-66150220 | None:intergenic | 50.0% | |
| CCATCGGGTGTATCAGTTTC+AGG | - | chr4_3:66150198-66150217 | Msa0656810:intron | 50.0% | |
| TGCGGGTTTGAGAAGATCGA+TGG | - | chr4_3:66150441-66150460 | Msa0656810:intron | 50.0% | |
| GGGTTTGAGAAGATCGATGG+CGG | - | chr4_3:66150444-66150463 | Msa0656810:intron | 50.0% | |
| GAACCGGATCTACGTGGGAT+TGG | - | chr4_3:66143279-66143298 | Msa0656810:three_prime_UTR | 55.0% | |
| CGACCAATCCCACGTAGATC+CGG | + | chr4_3:66143285-66143304 | None:intergenic | 55.0% | |
| CCACCGACGAAACGAATCAC+CGG | - | chr4_3:66143387-66143406 | Msa0656810:three_prime_UTR | 55.0% | |
| GCGAAACCCCTGCCATATTC+CGG | + | chr4_3:66143409-66143428 | None:intergenic | 55.0% | |
| ! | GAGGTTGAGAACGGGTTCAG+TGG | + | chr4_3:66143522-66143541 | None:intergenic | 55.0% |
| GAGCAGACGAGGTTGAGAAC+GGG | + | chr4_3:66143530-66143549 | None:intergenic | 55.0% | |
| GGAGCAGACGAGGTTGAGAA+CGG | + | chr4_3:66143531-66143550 | None:intergenic | 55.0% | |
| ! | TCGGCAAGGTTTGGAGCAAG+TGG | + | chr4_3:66143552-66143571 | None:intergenic | 55.0% |
| TCCAAGTTACAGCAGCCTCG+AGG | + | chr4_3:66144849-66144868 | None:intergenic | 55.0% | |
| TGTTTGAGAGTTCGGAGGGG+AGG | - | chr4_3:66146045-66146064 | Msa0656810:intron | 55.0% | |
| GTTTGAGAGTTCGGAGGGGA+GGG | - | chr4_3:66146046-66146065 | Msa0656810:intron | 55.0% | |
| TTTGAGAGTTCGGAGGGGAG+GGG | - | chr4_3:66146047-66146066 | Msa0656810:intron | 55.0% | |
| ! | TGAAGGGGAGAACTTTGGGG+AGG | + | chr4_3:66146340-66146359 | None:intergenic | 55.0% |
| ! | GGTAAGGGAAGGGAGGGTTT+TGG | + | chr4_3:66146400-66146419 | None:intergenic | 55.0% |
| CGTGGGCGATATCGTTGTGT+AGG | + | chr4_3:66147017-66147036 | None:intergenic | 55.0% | |
| TTGGCTGTTGAAGGCTCCTC+TGG | + | chr4_3:66147734-66147753 | None:intergenic | 55.0% | |
| CTCTACAACAGCTGCAGGCT+TGG | + | chr4_3:66147753-66147772 | None:intergenic | 55.0% | |
| CAAGCCTGCAGCTGTTGTAG+AGG | - | chr4_3:66147751-66147770 | Msa0656810:intron | 55.0% | |
| !! | ATCTGCTCGGTTTTGGTGGC+AGG | + | chr4_3:66147880-66147899 | None:intergenic | 55.0% |
| !! | CCTCATCTGCTCGGTTTTGG+TGG | + | chr4_3:66147884-66147903 | None:intergenic | 55.0% |
| CCACCAAAACCGAGCAGATG+AGG | - | chr4_3:66147881-66147900 | Msa0656810:intron | 55.0% | |
| ! | CTCCCTCATCTGCTCGGTTT+TGG | + | chr4_3:66147887-66147906 | None:intergenic | 55.0% |
| CAAGCACTCCCTCATCTGCT+CGG | + | chr4_3:66147893-66147912 | None:intergenic | 55.0% | |
| GAAGAGGGAGACGGCGATAT+AGG | - | chr4_3:66148300-66148319 | Msa0656810:intron | 55.0% | |
| CTGGAGATGGAGTCACTGAG+GGG | - | chr4_3:66148465-66148484 | Msa0656810:intron | 55.0% | |
| TGGAGATGGAGTCACTGAGG+GGG | - | chr4_3:66148466-66148485 | Msa0656810:intron | 55.0% | |
| TGGGTGGTTATGGAGAAGGG+TGG | + | chr4_3:66148785-66148804 | None:intergenic | 55.0% | |
| ! | AGGTGAAGCACCCACCATTG+TGG | - | chr4_3:66148852-66148871 | Msa0656810:intron | 55.0% |
| ! | GAAGCACCCACCATTGTGGA+TGG | - | chr4_3:66148856-66148875 | Msa0656810:intron | 55.0% |
| CCCACCATTGTGGATGGTCT+TGG | - | chr4_3:66148862-66148881 | Msa0656810:intron | 55.0% | |
| GCCAAGACCATCCACAATGG+TGG | + | chr4_3:66148866-66148885 | None:intergenic | 55.0% | |
| !! | TGGGTCTATGTGGTGGGTGT+AGG | + | chr4_3:66150169-66150188 | None:intergenic | 55.0% |
| CCGGTGATTCGTTTCGTCGG+TGG | + | chr4_3:66143390-66143409 | None:intergenic | 60.0% | |
| TCGCTCCAGTGCGGTGATTG+CGG | - | chr4_3:66143425-66143444 | Msa0656810:three_prime_UTR | 60.0% | |
| ! | GAGTACCGCAATCACCGCAC+TGG | + | chr4_3:66143433-66143452 | None:intergenic | 60.0% |
| TGGAGCAAGTGGAGCAGACG+AGG | + | chr4_3:66143541-66143560 | None:intergenic | 60.0% | |
| GCCTCGAGGCTGCTGTAACT+TGG | - | chr4_3:66144845-66144864 | Msa0656810:intron | 60.0% | |
| GGAGGGGAAGTGAGGGCTTT+GGG | - | chr4_3:66146063-66146082 | Msa0656810:intron | 60.0% | |
| GAGGGGAAGTGAGGGCTTTG+GGG | - | chr4_3:66146064-66146083 | Msa0656810:intron | 60.0% | |
| ! | AGGGGAAGTGAGGGCTTTGG+GGG | - | chr4_3:66146065-66146084 | Msa0656810:intron | 60.0% |
| GCTGCAGGCTTGGCTGTTGA+AGG | + | chr4_3:66147743-66147762 | None:intergenic | 60.0% | |
| TGGTGGCAGGCCTAATTGGC+AGG | + | chr4_3:66147867-66147886 | None:intergenic | 60.0% | |
| GGAGATGGAGTCACTGAGGG+GGG | - | chr4_3:66148467-66148486 | Msa0656810:intron | 60.0% | |
| GCAGGGGTTTCGCTCCAGTG+CGG | - | chr4_3:66143416-66143435 | Msa0656810:three_prime_UTR | 65.0% | |
| TTCGGAGGGGAGGGGAAGTG+AGG | - | chr4_3:66146055-66146074 | Msa0656810:intron | 65.0% | |
| TCGGAGGGGAGGGGAAGTGA+GGG | - | chr4_3:66146056-66146075 | Msa0656810:intron | 65.0% | |
| GGGAGGGGAAGTGAGGGCTT+TGG | - | chr4_3:66146062-66146081 | Msa0656810:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 66143277 | 66150843 | 66143277 | ID=Msa0656810;Name=Msa0656810 |
| chr4_3 | mRNA | 66143277 | 66150843 | 66143277 | ID=Msa0656810-mRNA-1;Parent=Msa0656810;Name=Msa0656810-mRNA-1;_AED=0.01;_eAED=0.01;_QI=136|1|1|1|1|1|12|271|408 |
| chr4_3 | exon | 66143277 | 66143724 | 66143277 | ID=Msa0656810-mRNA-1:exon:18962;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66144317 | 66144436 | 66144317 | ID=Msa0656810-mRNA-1:exon:18961;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66146184 | 66146261 | 66146184 | ID=Msa0656810-mRNA-1:exon:18960;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66146339 | 66146419 | 66146339 | ID=Msa0656810-mRNA-1:exon:18959;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66146578 | 66146659 | 66146578 | ID=Msa0656810-mRNA-1:exon:18958;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66146742 | 66146809 | 66146742 | ID=Msa0656810-mRNA-1:exon:18957;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66148258 | 66148318 | 66148258 | ID=Msa0656810-mRNA-1:exon:18956;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66148914 | 66148993 | 66148914 | ID=Msa0656810-mRNA-1:exon:18955;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66149208 | 66149284 | 66149208 | ID=Msa0656810-mRNA-1:exon:18954;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66149885 | 66149980 | 66149885 | ID=Msa0656810-mRNA-1:exon:18953;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66150279 | 66150417 | 66150279 | ID=Msa0656810-mRNA-1:exon:18952;Parent=Msa0656810-mRNA-1 |
| chr4_3 | exon | 66150540 | 66150843 | 66150540 | ID=Msa0656810-mRNA-1:exon:18951;Parent=Msa0656810-mRNA-1 |
| chr4_3 | five_prime_UTR | 66150708 | 66150843 | 66150708 | ID=Msa0656810-mRNA-1:five_prime_utr;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66150540 | 66150707 | 66150540 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66150279 | 66150417 | 66150279 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66149885 | 66149980 | 66149885 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66149208 | 66149284 | 66149208 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66148914 | 66148993 | 66148914 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66148258 | 66148318 | 66148258 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66146742 | 66146809 | 66146742 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66146578 | 66146659 | 66146578 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66146339 | 66146419 | 66146339 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66146184 | 66146261 | 66146184 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66144317 | 66144436 | 66144317 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | CDS | 66143548 | 66143724 | 66143548 | ID=Msa0656810-mRNA-1:cds;Parent=Msa0656810-mRNA-1 |
| chr4_3 | three_prime_UTR | 66143277 | 66143547 | 66143277 | ID=Msa0656810-mRNA-1:three_prime_utr;Parent=Msa0656810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
