Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242640 | XP_013445304.1 | 98.058 | 412 | 8 | 0 | 1 | 412 | 1 | 412 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242640 | sp|O64517|MCA4_ARATH | 66.038 | 424 | 126 | 6 | 1 | 412 | 1 | 418 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242640 | A0A072U0M2 | 98.058 | 412 | 8 | 0 | 1 | 412 | 1 | 412 | 0.0 | 833 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa1242640 | 0.808324 | 3.275543e-50 | -8.615850e-47 |
| Msa0011930 | Msa1242640 | 0.815179 | 1.055666e-51 | -8.615850e-47 |
| Msa0012220 | Msa1242640 | 0.809297 | 2.028536e-50 | -8.615850e-47 |
| Msa0017320 | Msa1242640 | 0.812157 | 4.883349e-51 | -8.615850e-47 |
| Msa0030280 | Msa1242640 | 0.807270 | 5.485577e-50 | -8.615850e-47 |
| Msa0033880 | Msa1242640 | 0.815587 | 8.566477e-52 | -8.615850e-47 |
| Msa0041690 | Msa1242640 | 0.853849 | 1.820200e-61 | -8.615850e-47 |
| Msa0055100 | Msa1242640 | 0.811786 | 5.882860e-51 | -8.615850e-47 |
| Msa0061970 | Msa1242640 | 0.801408 | 9.134090e-49 | -8.615850e-47 |
| Msa0069600 | Msa1242640 | 0.812777 | 3.574562e-51 | -8.615850e-47 |
| Msa0070430 | Msa1242640 | 0.803634 | 3.174066e-49 | -8.615850e-47 |
| Msa0101180 | Msa1242640 | 0.823398 | 1.415367e-53 | -8.615850e-47 |
| Msa0116790 | Msa1242640 | 0.816488 | 5.388134e-52 | -8.615850e-47 |
| Msa0119320 | Msa1242640 | 0.807177 | 5.740721e-50 | -8.615850e-47 |
| Msa0606810 | Msa1242640 | 0.807587 | 4.698771e-50 | -8.615850e-47 |
| Msa0609220 | Msa1242640 | 0.806865 | 6.684325e-50 | -8.615850e-47 |
| Msa0610090 | Msa1242640 | 0.824194 | 9.210807e-54 | -8.615850e-47 |
| Msa0640940 | Msa1242640 | 0.813713 | 2.227251e-51 | -8.615850e-47 |
| Msa0642970 | Msa1242640 | 0.817083 | 3.963587e-52 | -8.615850e-47 |
| Msa0643320 | Msa1242640 | 0.801191 | 1.011608e-48 | -8.615850e-47 |
| Msa0644030 | Msa1242640 | 0.818429 | 1.969111e-52 | -8.615850e-47 |
| Msa0656810 | Msa1242640 | 0.808187 | 3.502727e-50 | -8.615850e-47 |
| Msa0658480 | Msa1242640 | 0.821958 | 3.060995e-53 | -8.615850e-47 |
| Msa0669180 | Msa1242640 | 0.807798 | 4.238616e-50 | -8.615850e-47 |
| Msa0679100 | Msa1242640 | 0.812520 | 4.067134e-51 | -8.615850e-47 |
| Msa0679360 | Msa1242640 | 0.807128 | 5.879871e-50 | -8.615850e-47 |
| Msa0686080 | Msa1242640 | 0.828146 | 1.057240e-54 | -8.615850e-47 |
| Msa0689760 | Msa1242640 | 0.813095 | 3.043640e-51 | -8.615850e-47 |
| Msa0698100 | Msa1242640 | 0.805906 | 1.064414e-49 | -8.615850e-47 |
| Msa0713340 | Msa1242640 | 0.804828 | 1.790613e-49 | -8.615850e-47 |
| Msa0716410 | Msa1242640 | 0.823924 | 1.065660e-53 | -8.615850e-47 |
| Msa0716860 | Msa1242640 | 0.820656 | 6.112486e-53 | -8.615850e-47 |
| Msa0743530 | Msa1242640 | 0.820257 | 7.547932e-53 | -8.615850e-47 |
| Msa0744100 | Msa1242640 | 0.832675 | 8.256266e-56 | -8.615850e-47 |
| Msa0754930 | Msa1242640 | 0.804400 | 2.199823e-49 | -8.615850e-47 |
| Msa0788120 | Msa1242640 | 0.803008 | 4.278129e-49 | -8.615850e-47 |
| Msa0789560 | Msa1242640 | 0.810997 | 8.724732e-51 | -8.615850e-47 |
| Msa0799000 | Msa1242640 | 0.820148 | 7.991752e-53 | -8.615850e-47 |
| Msa0819540 | Msa1242640 | 0.809081 | 2.256279e-50 | -8.615850e-47 |
| Msa0822170 | Msa1242640 | 0.815942 | 7.138816e-52 | -8.615850e-47 |
| Msa0822180 | Msa1242640 | 0.803799 | 2.933397e-49 | -8.615850e-47 |
| Msa0825270 | Msa1242640 | 0.835859 | 1.312889e-56 | -8.615850e-47 |
| Msa0839090 | Msa1242640 | 0.820318 | 7.306044e-53 | -8.615850e-47 |
| Msa0126880 | Msa1242640 | 0.802620 | 5.144670e-49 | -8.615850e-47 |
| Msa0127850 | Msa1242640 | 0.809610 | 1.737495e-50 | -8.615850e-47 |
| Msa0136120 | Msa1242640 | 0.803828 | 2.893041e-49 | -8.615850e-47 |
| Msa0138360 | Msa1242640 | 0.825905 | 3.631632e-54 | -8.615850e-47 |
| Msa0142110 | Msa1242640 | 0.801337 | 9.442995e-49 | -8.615850e-47 |
| Msa0145150 | Msa1242640 | 0.804709 | 1.896842e-49 | -8.615850e-47 |
| Msa0146080 | Msa1242640 | 0.813323 | 2.712402e-51 | -8.615850e-47 |
| Msa0147980 | Msa1242640 | 0.832254 | 1.049616e-55 | -8.615850e-47 |
| Msa0150260 | Msa1242640 | 0.809016 | 2.330326e-50 | -8.615850e-47 |
| Msa0166750 | Msa1242640 | 0.815937 | 7.157320e-52 | -8.615850e-47 |
| Msa0171850 | Msa1242640 | 0.803546 | 3.310588e-49 | -8.615850e-47 |
| Msa0171980 | Msa1242640 | 0.824764 | 6.762327e-54 | -8.615850e-47 |
| Msa0174000 | Msa1242640 | 0.820831 | 5.571553e-53 | -8.615850e-47 |
| Msa0181000 | Msa1242640 | 0.804695 | 1.909516e-49 | -8.615850e-47 |
| Msa0192640 | Msa1242640 | 0.823527 | 1.320581e-53 | -8.615850e-47 |
| Msa0205010 | Msa1242640 | 0.803649 | 3.151247e-49 | -8.615850e-47 |
| Msa0208000 | Msa1242640 | 0.851859 | 6.745358e-61 | -8.615850e-47 |
| Msa0221600 | Msa1242640 | 0.815326 | 9.792405e-52 | -8.615850e-47 |
| Msa0226460 | Msa1242640 | 0.807619 | 4.626694e-50 | -8.615850e-47 |
| Msa0229360 | Msa1242640 | 0.839297 | 1.723548e-57 | -8.615850e-47 |
| Msa0230150 | Msa1242640 | 0.821590 | 3.724136e-53 | -8.615850e-47 |
| Msa0238030 | Msa1242640 | 0.800627 | 1.318681e-48 | -8.615850e-47 |
| Msa1226610 | Msa1242640 | 0.817488 | 3.213598e-52 | -8.615850e-47 |
| Msa1242640 | Msa1253810 | 0.805209 | 1.490911e-49 | -8.615850e-47 |
| Msa1242640 | Msa1255410 | 0.817215 | 3.701770e-52 | -8.615850e-47 |
| Msa1242640 | Msa1257070 | 0.847461 | 1.139388e-59 | -8.615850e-47 |
| Msa1242640 | Msa1259640 | 0.814922 | 1.203893e-51 | -8.615850e-47 |
| Msa1242640 | Msa1261070 | 0.829548 | 4.840799e-55 | -8.615850e-47 |
| Msa1242640 | Msa1261850 | 0.800910 | 1.154679e-48 | -8.615850e-47 |
| Msa1242640 | Msa1264420 | 0.839564 | 1.469189e-57 | -8.615850e-47 |
| Msa1242640 | Msa1266330 | 0.802634 | 5.110928e-49 | -8.615850e-47 |
| Msa1242640 | Msa1276970 | 0.826618 | 2.457133e-54 | -8.615850e-47 |
| Msa1242640 | Msa1297530 | 0.821886 | 3.180055e-53 | -8.615850e-47 |
| Msa1242640 | Msa1297800 | 0.834204 | 3.430966e-56 | -8.615850e-47 |
| Msa1242640 | Msa1303580 | 0.812927 | 3.314322e-51 | -8.615850e-47 |
| Msa1242640 | Msa1318620 | 0.832116 | 1.135795e-55 | -8.615850e-47 |
| Msa1242640 | Msa1320820 | 0.819840 | 9.402463e-53 | -8.615850e-47 |
| Msa1242640 | Msa1323690 | 0.819791 | 9.648670e-53 | -8.615850e-47 |
| Msa1242640 | Msa1329450 | 0.832638 | 8.434281e-56 | -8.615850e-47 |
| Msa1242640 | Msa1329790 | 0.819060 | 1.415837e-52 | -8.615850e-47 |
| Msa1242640 | Msa1333970 | 0.824470 | 7.934359e-54 | -8.615850e-47 |
| Msa1242640 | Msa1336040 | 0.802085 | 6.631286e-49 | -8.615850e-47 |
| Msa1242640 | Msa1344310 | 0.843830 | 1.100625e-58 | -8.615850e-47 |
| Msa1242640 | Msa1356610 | 0.802369 | 5.797989e-49 | -8.615850e-47 |
| Msa1242640 | Msa1364160 | 0.804813 | 1.803852e-49 | -8.615850e-47 |
| Msa1242640 | Msa1371520 | 0.818515 | 1.883037e-52 | -8.615850e-47 |
| Msa1242640 | Msa1373820 | 0.803358 | 3.620754e-49 | -8.615850e-47 |
| Msa1242640 | Msa1410420 | 0.817927 | 2.557614e-52 | -8.615850e-47 |
| Msa1242640 | Msa1411950 | 0.822432 | 2.376638e-53 | -8.615850e-47 |
| Msa1242640 | Msa1416260 | 0.843658 | 1.224093e-58 | -8.615850e-47 |
| Msa1242640 | Msa1418240 | 0.837285 | 5.689598e-57 | -8.615850e-47 |
| Msa1242640 | Msa1420250 | 0.814522 | 1.475807e-51 | -8.615850e-47 |
| Msa1242640 | Msa1424350 | 0.815393 | 9.459069e-52 | -8.615850e-47 |
| Msa1242640 | Msa1426910 | 0.811745 | 6.002871e-51 | -8.615850e-47 |
| Msa1242640 | Msa1432480 | 0.831457 | 1.651233e-55 | -8.615850e-47 |
| Msa1242640 | Msa1451150 | 0.809341 | 1.985103e-50 | -8.615850e-47 |
| Msa1242640 | Msa1454530 | 0.812304 | 4.535784e-51 | -8.615850e-47 |
| Msa1242640 | Msa1459960 | 0.829390 | 5.289058e-55 | -8.615850e-47 |
| Msa0382370 | Msa1242640 | 0.806880 | 6.635328e-50 | -8.615850e-47 |
| Msa0384670 | Msa1242640 | 0.836674 | 8.148886e-57 | -8.615850e-47 |
| Msa0394690 | Msa1242640 | 0.826599 | 2.482763e-54 | -8.615850e-47 |
| Msa0432070 | Msa1242640 | 0.809893 | 1.510989e-50 | -8.615850e-47 |
| Msa0432160 | Msa1242640 | 0.800531 | 1.379679e-48 | -8.615850e-47 |
| Msa0433610 | Msa1242640 | 0.808535 | 2.953062e-50 | -8.615850e-47 |
| Msa0434570 | Msa1242640 | 0.834659 | 2.637915e-56 | -8.615850e-47 |
| Msa0434770 | Msa1242640 | 0.841100 | 5.832545e-58 | -8.615850e-47 |
| Msa0473330 | Msa1242640 | 0.804854 | 1.769191e-49 | -8.615850e-47 |
| Msa0473980 | Msa1242640 | 0.805521 | 1.282445e-49 | -8.615850e-47 |
| Msa0474700 | Msa1242640 | 0.811312 | 7.456042e-51 | -8.615850e-47 |
| Msa0476680 | Msa1242640 | 0.802308 | 5.966601e-49 | -8.615850e-47 |
| Msa0478580 | Msa1242640 | 0.848215 | 7.063025e-60 | -8.615850e-47 |
| Msa0981430 | Msa1242640 | 0.813089 | 3.053336e-51 | -8.615850e-47 |
| Msa1010460 | Msa1242640 | 0.831225 | 1.882844e-55 | -8.615850e-47 |
| Msa1027360 | Msa1242640 | 0.801523 | 8.648133e-49 | -8.615850e-47 |
| Msa1027700 | Msa1242640 | 0.805733 | 1.157791e-49 | -8.615850e-47 |
| Msa1059960 | Msa1242640 | 0.803782 | 2.958233e-49 | -8.615850e-47 |
| Msa1070390 | Msa1242640 | 0.813020 | 3.162028e-51 | -8.615850e-47 |
| Msa1072600 | Msa1242640 | 0.802134 | 6.478816e-49 | -8.615850e-47 |
| Msa1083880 | Msa1242640 | 0.830822 | 2.365042e-55 | -8.615850e-47 |
| Msa1089270 | Msa1242640 | 0.807100 | 5.959831e-50 | -8.615850e-47 |
| Msa1093100 | Msa1242640 | 0.822648 | 2.116434e-53 | -8.615850e-47 |
| Msa1098890 | Msa1242640 | 0.805640 | 1.211072e-49 | -8.615850e-47 |
| Msa1105160 | Msa1242640 | 0.800574 | 1.352225e-48 | -8.615850e-47 |
| Msa0241830 | Msa1242640 | 0.836341 | 9.902671e-57 | -8.615850e-47 |
| Msa0244980 | Msa1242640 | 0.801404 | 9.150382e-49 | -8.615850e-47 |
| Msa0265160 | Msa1242640 | 0.803136 | 4.026681e-49 | -8.615850e-47 |
| Msa0296790 | Msa1242640 | 0.801168 | 1.022468e-48 | -8.615850e-47 |
| Msa0299880 | Msa1242640 | 0.803301 | 3.720619e-49 | -8.615850e-47 |
| Msa0312910 | Msa1242640 | 0.815219 | 1.034045e-51 | -8.615850e-47 |
| Msa0322900 | Msa1242640 | 0.839445 | 1.578222e-57 | -8.615850e-47 |
| Msa0363060 | Msa1242640 | 0.811962 | 5.385089e-51 | -8.615850e-47 |
| Msa1114040 | Msa1242640 | 0.810583 | 1.072511e-50 | -8.615850e-47 |
| Msa1123350 | Msa1242640 | 0.802287 | 6.027472e-49 | -8.615850e-47 |
| Msa1127540 | Msa1242640 | 0.825605 | 4.279510e-54 | -8.615850e-47 |
| Msa1131490 | Msa1242640 | 0.801722 | 7.872448e-49 | -8.615850e-47 |
| Msa1168550 | Msa1242640 | 0.800240 | 1.581348e-48 | -8.615850e-47 |
| Msa1168590 | Msa1242640 | 0.804855 | 1.768145e-49 | -8.615850e-47 |
| Msa1173900 | Msa1242640 | 0.820890 | 5.399594e-53 | -8.615850e-47 |
| Msa1176980 | Msa1242640 | 0.817534 | 3.137774e-52 | -8.615850e-47 |
| Msa1181170 | Msa1242640 | -0.808593 | 2.870135e-50 | -8.615850e-47 |
| Msa1188560 | Msa1242640 | 0.847126 | 1.408273e-59 | -8.615850e-47 |
| Msa1199290 | Msa1242640 | 0.864698 | 1.008483e-64 | -8.615850e-47 |
| Msa1201810 | Msa1242640 | 0.801796 | 7.602698e-49 | -8.615850e-47 |
| Msa1204830 | Msa1242640 | 0.810278 | 1.248039e-50 | -8.615850e-47 |
| Msa1204850 | Msa1242640 | 0.808607 | 2.850647e-50 | -8.615850e-47 |
| Msa1205480 | Msa1242640 | 0.840477 | 8.491110e-58 | -8.615850e-47 |
| Msa1205590 | Msa1242640 | 0.829446 | 5.125205e-55 | -8.615850e-47 |
| Msa1205850 | Msa1242640 | 0.815408 | 9.388720e-52 | -8.615850e-47 |
| Msa1206650 | Msa1242640 | 0.841941 | 3.500906e-58 | -8.615850e-47 |
| Msa1211340 | Msa1242640 | 0.819079 | 1.401895e-52 | -8.615850e-47 |
| Msa1213810 | Msa1242640 | 0.806239 | 9.060325e-50 | -8.615850e-47 |
| Msa1214320 | Msa1242640 | 0.841433 | 4.765099e-58 | -8.615850e-47 |
| Msa1223330 | Msa1242640 | 0.828509 | 8.643367e-55 | -8.615850e-47 |
| Msa0485240 | Msa1242640 | 0.836917 | 7.064648e-57 | -8.615850e-47 |
| Msa0491000 | Msa1242640 | 0.808462 | 3.061005e-50 | -8.615850e-47 |
| Msa0511770 | Msa1242640 | 0.817981 | 2.487593e-52 | -8.615850e-47 |
| Msa0518030 | Msa1242640 | 0.827172 | 1.811300e-54 | -8.615850e-47 |
| Msa0527190 | Msa1242640 | 0.803047 | 4.199345e-49 | -8.615850e-47 |
| Msa0531250 | Msa1242640 | 0.803571 | 3.271005e-49 | -8.615850e-47 |
| Msa0547990 | Msa1242640 | 0.821208 | 4.563146e-53 | -8.615850e-47 |
| Msa0561430 | Msa1242640 | 0.803128 | 4.041527e-49 | -8.615850e-47 |
| Msa0581690 | Msa1242640 | 0.804711 | 1.894546e-49 | -8.615850e-47 |
| Msa0582280 | Msa1242640 | 0.815640 | 8.337214e-52 | -8.615850e-47 |
| Msa0583500 | Msa1242640 | 0.823719 | 1.190500e-53 | -8.615850e-47 |
| Msa0584550 | Msa1242640 | 0.804089 | 2.553667e-49 | -8.615850e-47 |
| Msa0597770 | Msa1242640 | 0.815579 | 8.598896e-52 | -8.615850e-47 |
| Msa0599900 | Msa1242640 | 0.805270 | 1.447343e-49 | -8.615850e-47 |
| Msa0864420 | Msa1242640 | 0.809360 | 1.966666e-50 | -8.615850e-47 |
| Msa0869010 | Msa1242640 | 0.841255 | 5.307798e-58 | -8.615850e-47 |
| Msa0870650 | Msa1242640 | 0.865514 | 5.588536e-65 | -8.615850e-47 |
| Msa0882730 | Msa1242640 | 0.806458 | 8.146203e-50 | -8.615850e-47 |
| Msa0903780 | Msa1242640 | 0.829825 | 4.144080e-55 | -8.615850e-47 |
| Msa0928120 | Msa1242640 | 0.802933 | 4.434784e-49 | -8.615850e-47 |
| Msa0932350 | Msa1242640 | 0.806535 | 7.847814e-50 | -8.615850e-47 |
| Msa0937020 | Msa1242640 | 0.800512 | 1.391809e-48 | -8.615850e-47 |
| Msa0943170 | Msa1242640 | 0.822020 | 2.961515e-53 | -8.615850e-47 |
| Msa0947800 | Msa1242640 | 0.814700 | 1.348086e-51 | -8.615850e-47 |
| Msa0973320 | Msa1242640 | 0.807990 | 3.859303e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242640 | MtrunA17_Chr8g0356311 | 98.058 | 412 | 8 | 0 | 1 | 412 | 1 | 412 | 0.0 | 833 |
| Msa1242640 | MtrunA17_Chr2g0309701 | 65.625 | 416 | 121 | 6 | 1 | 412 | 4 | 401 | 0.0 | 538 |
| Msa1242640 | MtrunA17_Chr7g0254941 | 53.503 | 157 | 69 | 2 | 3 | 156 | 7 | 162 | 1.63e-49 | 170 |
| Msa1242640 | MtrunA17_Chr7g0254941 | 51.807 | 83 | 40 | 0 | 329 | 411 | 231 | 313 | 8.35e-22 | 95.1 |
| Msa1242640 | MtrunA17_Chr8g0356911 | 31.765 | 170 | 100 | 2 | 3 | 158 | 4 | 171 | 1.18e-23 | 99.8 |
| Msa1242640 | MtrunA17_Chr7g0233321 | 37.333 | 150 | 87 | 4 | 3 | 146 | 74 | 222 | 3.68e-23 | 99.8 |
| Msa1242640 | MtrunA17_Chr1g0175941 | 34.375 | 160 | 99 | 2 | 3 | 156 | 16 | 175 | 1.10e-21 | 97.8 |
| Msa1242640 | MtrunA17_Chr2g0279271 | 36.913 | 149 | 89 | 3 | 3 | 146 | 116 | 264 | 2.62e-20 | 92.0 |
| Msa1242640 | MtrunA17_Chr2g0279251 | 33.775 | 151 | 92 | 3 | 3 | 146 | 88 | 237 | 1.32e-17 | 84.0 |
| Msa1242640 | MtrunA17_Chr4g0050351 | 34.228 | 149 | 92 | 4 | 3 | 146 | 125 | 272 | 2.38e-17 | 83.2 |
| Msa1242640 | MtrunA17_Chr2g0279261 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 1.74e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242640 | AT1G79340.1 | 66.038 | 424 | 126 | 6 | 1 | 412 | 1 | 418 | 0.0 | 553 |
| Msa1242640 | AT1G79330.1 | 65.714 | 420 | 126 | 6 | 1 | 412 | 1 | 410 | 0.0 | 550 |
| Msa1242640 | AT1G79310.1 | 55.450 | 422 | 159 | 9 | 1 | 412 | 1 | 403 | 1.29e-157 | 450 |
| Msa1242640 | AT1G79320.1 | 57.246 | 414 | 129 | 6 | 1 | 412 | 1 | 368 | 1.39e-157 | 449 |
| Msa1242640 | AT1G16420.1 | 41.570 | 433 | 179 | 10 | 1 | 412 | 1 | 380 | 2.49e-98 | 298 |
| Msa1242640 | AT5G04200.1 | 36.386 | 415 | 156 | 11 | 3 | 411 | 10 | 322 | 2.44e-72 | 230 |
| Msa1242640 | AT1G02170.1 | 37.584 | 149 | 87 | 4 | 3 | 146 | 80 | 227 | 3.35e-23 | 100 |
| Msa1242640 | AT4G25110.2 | 36.486 | 148 | 89 | 3 | 3 | 146 | 116 | 262 | 2.53e-22 | 98.6 |
| Msa1242640 | AT4G25110.1 | 36.242 | 149 | 89 | 4 | 3 | 146 | 116 | 263 | 2.01e-21 | 95.9 |
| Msa1242640 | AT5G64240.2 | 33.557 | 149 | 93 | 3 | 3 | 146 | 90 | 237 | 5.91e-18 | 85.1 |
| Msa1242640 | AT5G64240.1 | 33.557 | 149 | 93 | 3 | 3 | 146 | 90 | 237 | 7.68e-18 | 84.0 |
Find 128 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACTTGAGCAGAAAAC+TGG | 0.275935 | 8_2:+27111650 | Msa1242640:CDS |
| GGATCCGGCTTTGGATTATC+AGG | 0.289069 | 8_2:+27111464 | Msa1242640:CDS |
| ATAAGCATTAGCTGCATTTC+CGG | 0.302115 | 8_2:-27112023 | None:intergenic |
| TTCATAAACTTCTTCACTTT+AGG | 0.312797 | 8_2:-27111740 | None:intergenic |
| AGGGGATTTCATGTCCCTTC+AGG | 0.322536 | 8_2:+27111524 | Msa1242640:CDS |
| GGTGGACAAGGTGGGATATT+GGG | 0.325642 | 8_2:+27111800 | Msa1242640:CDS |
| CTGCTGTTTGTTCATTATAG+TGG | 0.327931 | 8_2:+27110343 | Msa1242640:CDS |
| ATGAAGAAACAAATGAAGAT+AGG | 0.350793 | 8_2:+27111570 | Msa1242640:CDS |
| ACTCGTCTTCCTGCTGAAAC+TGG | 0.361776 | 8_2:+27110373 | Msa1242640:CDS |
| GGAAATGCAGCTAATGCTTA+TGG | 0.373990 | 8_2:+27112025 | Msa1242640:CDS |
| GAACATTCTGGATCCGGCTT+TGG | 0.378094 | 8_2:+27111455 | Msa1242640:CDS |
| AGGTGGACAAGGTGGGATAT+TGG | 0.378468 | 8_2:+27111799 | Msa1242640:CDS |
| TAATAACATAAATATTCCTT+TGG | 0.380115 | 8_2:-27112401 | None:intergenic |
| TTGTCATTCTATCATGTTGT+GGG | 0.395163 | 8_2:-27110012 | None:intergenic |
| TCATATCTGTTGGCACAAAC+TGG | 0.406052 | 8_2:+27112465 | Msa1242640:three_prime_UTR |
| AAGGGAGAAGAGGAACATTC+TGG | 0.411416 | 8_2:+27111443 | Msa1242640:CDS |
| GTCGGAGCTGGTCAGATCTT+CGG | 0.416923 | 8_2:+27110309 | Msa1242640:CDS |
| CCCACTTCCGTCTCCATGGC+AGG | 0.428897 | 8_2:-27111893 | None:intergenic |
| GACAAGCATCTGCTGAAGTC+TGG | 0.432339 | 8_2:-27111997 | None:intergenic |
| CACCTTCACCACCTCCATGC+TGG | 0.437332 | 8_2:-27111781 | None:intergenic |
| CAAAACAGTGATGTCATCTT+CGG | 0.443836 | 8_2:-27110230 | None:intergenic |
| AGCTTTCAGCAATGCAATAC+AGG | 0.451961 | 8_2:+27112048 | Msa1242640:CDS |
| TATGATTATTAAAATGATAG+TGG | 0.457923 | 8_2:-27112447 | None:intergenic |
| TGATGATTTCAAGGAATTTG+TGG | 0.462771 | 8_2:+27111322 | Msa1242640:CDS |
| AACAATGAATGTTGCTCCAA+AGG | 0.465866 | 8_2:+27112385 | Msa1242640:three_prime_UTR |
| TCAGCAGATGCTTGTCCTGC+CGG | 0.466394 | 8_2:+27112004 | Msa1242640:CDS |
| GATTATCAGGCTTTCTGCAT+AGG | 0.478422 | 8_2:+27111477 | Msa1242640:CDS |
| TGATTGACTGGGAAAGTAGA+TGG | 0.479382 | 8_2:-27112547 | Msa1242650:three_prime_UTR |
| CAGATAGGAGAGAGCACAAA+GGG | 0.484810 | 8_2:+27111425 | Msa1242640:CDS |
| GTGAACAGATGATGATTTCA+AGG | 0.489198 | 8_2:+27111313 | Msa1242640:intron |
| GAAGAGGAACATTCTGGATC+CGG | 0.491474 | 8_2:+27111449 | Msa1242640:CDS |
| TATTTGTAAAACTGATTGAC+TGG | 0.492064 | 8_2:-27112559 | Msa1242650:three_prime_UTR |
| CGTCTTATGTTCTTTCCTGT+CGG | 0.492887 | 8_2:-27110280 | None:intergenic |
| TGAAGAAACAAATGAAGATA+GGG | 0.494506 | 8_2:+27111571 | Msa1242640:CDS |
| AAAACATATCAGCACAAGAA+AGG | 0.502276 | 8_2:-27112199 | None:intergenic |
| GCCTGCCATGGAGACGGAAG+TGG | 0.502627 | 8_2:+27111892 | Msa1242640:CDS |
| CTCATCAGAATCCCACCGCT+TGG | 0.506927 | 8_2:-27111959 | None:intergenic |
| AGGTGGGATATTGGGAATGG+TGG | 0.508525 | 8_2:+27111808 | Msa1242640:CDS |
| TTTCAAGGAATTTGTGGATG+GGG | 0.511520 | 8_2:+27111328 | Msa1242640:CDS |
| ACTGGAGAGGATGATGATAC+TGG | 0.514134 | 8_2:+27110391 | Msa1242640:CDS |
| GAAGAAGCTAAGGAGCAGAT+AGG | 0.515777 | 8_2:+27111410 | Msa1242640:CDS |
| CTGCTCAAGTATATCAATGA+GGG | 0.521728 | 8_2:-27111642 | None:intergenic |
| GGTGGTGAAGGTGGACAAGG+TGG | 0.521742 | 8_2:+27111791 | Msa1242640:CDS |
| GCGAGAAAAGCCGTATTGAT+CGG | 0.523585 | 8_2:+27110115 | Msa1242640:CDS |
| TCCCACATGGAGTGAAGAAT+AGG | 0.524773 | 8_2:+27111603 | Msa1242640:CDS |
| CTCCAGCATGGAGGTGGTGA+AGG | 0.526322 | 8_2:+27111779 | Msa1242640:CDS |
| ACTTCCCACTTCCGTCTCCA+TGG | 0.527397 | 8_2:-27111897 | None:intergenic |
| GGGAAAGAAAATATAGATGT+TGG | 0.529307 | 8_2:+27111671 | Msa1242640:CDS |
| ATTTCAAGGAATTTGTGGAT+GGG | 0.534026 | 8_2:+27111327 | Msa1242640:CDS |
| CTGGTCAGATCTTCGGAGGA+TGG | 0.535257 | 8_2:+27110316 | Msa1242640:CDS |
| GCATTAGCTGCATTTCCGGC+AGG | 0.539676 | 8_2:-27112019 | None:intergenic |
| GGAGGTGGTGAAGGTGGACA+AGG | 0.539731 | 8_2:+27111788 | Msa1242640:CDS |
| AAATGCTTGATCGAACGTTA+CGG | 0.540516 | 8_2:+27110202 | Msa1242640:CDS |
| AACAAGCTCCAGCATGGAGG+TGG | 0.540605 | 8_2:+27111773 | Msa1242640:CDS |
| TGGATCTTAGAAGAAGATGA+AGG | 0.542042 | 8_2:-27110086 | None:intergenic |
| AGTAAGCATGAAGTATATGC+TGG | 0.543669 | 8_2:+27111917 | Msa1242640:CDS |
| TGCAATACAGGCTATAATTG+AGG | 0.544373 | 8_2:+27112060 | Msa1242640:CDS |
| TGAGGATGCTATTGAGTCAA+GGG | 0.546396 | 8_2:+27111505 | Msa1242640:CDS |
| TCATCCTCTCCAGTTTCAGC+AGG | 0.549079 | 8_2:-27110382 | None:intergenic |
| GATTTCAAGGAATTTGTGGA+TGG | 0.550385 | 8_2:+27111326 | Msa1242640:CDS |
| TCTGATATGAATCTCATCAC+TGG | 0.553185 | 8_2:+27110436 | Msa1242640:CDS |
| AAGACGTGTTCTGTCGGAGC+TGG | 0.553482 | 8_2:+27110297 | Msa1242640:CDS |
| TTTGTTCATTATAGTGGACA+TGG | 0.555229 | 8_2:+27110349 | Msa1242640:CDS |
| AGAGCGAAGCTACAGAAAGA+TGG | 0.556470 | 8_2:+27112127 | Msa1242640:CDS |
| TGCAAAGCCTGCCATGGAGA+CGG | 0.557128 | 8_2:+27111886 | Msa1242640:CDS |
| TTTGTCATTCTATCATGTTG+TGG | 0.559204 | 8_2:-27110013 | None:intergenic |
| TCGTCGTACACGGAGCCGAC+AGG | 0.559875 | 8_2:+27110265 | Msa1242640:CDS |
| AGAGAGCACAAAGGGAGAAG+AGG | 0.560245 | 8_2:+27111433 | Msa1242640:CDS |
| TGATCACTGCAATAGAGTCC+TGG | 0.562515 | 8_2:-27112163 | None:intergenic |
| GTAGTTGATTCCGATCAATA+CGG | 0.563226 | 8_2:-27110125 | None:intergenic |
| CAGCATGGAGGTGGTGAAGG+TGG | 0.564016 | 8_2:+27111782 | Msa1242640:CDS |
| GATGGATTCACTCAAAAGCC+AGG | 0.574901 | 8_2:+27112145 | Msa1242640:CDS |
| ATGGGGTTCCTAGAGGATGT+AGG | 0.576033 | 8_2:+27111345 | Msa1242640:CDS |
| ATATACTTGAGCAGAAAACT+GGG | 0.577101 | 8_2:+27111651 | Msa1242640:CDS |
| TGGCTTGATTGAAGAAGCTA+AGG | 0.577289 | 8_2:+27111400 | Msa1242640:CDS |
| ATACTCGGAGCTTATTCTCA+AGG | 0.577748 | 8_2:+27112102 | Msa1242640:CDS |
| GTGGTGAAGGTGGACAAGGT+GGG | 0.577935 | 8_2:+27111792 | Msa1242640:CDS |
| AAGCTGAATGATAATGATGA+GGG | 0.577946 | 8_2:+27111860 | Msa1242640:CDS |
| GACTGGGAAAGTAGATGGCT+AGG | 0.578762 | 8_2:-27112542 | Msa1242650:three_prime_UTR |
| GGTGGGATATTGGGAATGGT+GGG | 0.579754 | 8_2:+27111809 | Msa1242640:CDS |
| GTGATGAGATTCATATCAGA+AGG | 0.580568 | 8_2:-27110433 | None:intergenic |
| TGATGGTGCAATTACATACT+CGG | 0.584306 | 8_2:+27112087 | Msa1242640:CDS |
| AAAGCTGAATGATAATGATG+AGG | 0.590743 | 8_2:+27111859 | Msa1242640:CDS |
| ATGGTCAGCCTACATCCTCT+AGG | 0.591604 | 8_2:-27111353 | None:intergenic |
| ATCTTGAACAAGCTCCAGCA+TGG | 0.591703 | 8_2:+27111767 | Msa1242640:CDS |
| GGGATATGCAAAGCCTGCCA+TGG | 0.591792 | 8_2:+27111880 | Msa1242640:CDS |
| CTTTCTGCATAGGAAAGTTG+AGG | 0.592352 | 8_2:+27111487 | Msa1242640:CDS |
| AAAGCCTGATAATCCAAAGC+CGG | 0.593904 | 8_2:-27111468 | None:intergenic |
| TTGAGGATGCTATTGAGTCA+AGG | 0.594398 | 8_2:+27111504 | Msa1242640:CDS |
| ATTTGTAAAACTGATTGACT+GGG | 0.596670 | 8_2:-27112558 | Msa1242650:three_prime_UTR |
| TCTGCTCAAGTATATCAATG+AGG | 0.604282 | 8_2:-27111643 | None:intergenic |
| GACCTATTCTTCACTCCATG+TGG | 0.610109 | 8_2:-27111605 | None:intergenic |
| CCTGCCATGGAGACGGAAGT+GGG | 0.610405 | 8_2:+27111893 | Msa1242640:CDS |
| GTATGACGACGCAATCCTGA+AGG | 0.612914 | 8_2:-27111539 | None:intergenic |
| ACAAGGTGGGATATTGGGAA+TGG | 0.615477 | 8_2:+27111805 | Msa1242640:CDS |
| GAACATAAGACGTGTTCTGT+CGG | 0.616617 | 8_2:+27110291 | Msa1242640:CDS |
| TTGTTCATTATAGTGGACAT+GGG | 0.616864 | 8_2:+27110350 | Msa1242640:CDS |
| GATGCGTAAACGACGTGTGG+AGG | 0.622173 | 8_2:+27110173 | Msa1242640:CDS |
| AGCGGTGGGATTCTGATGAG+CGG | 0.625209 | 8_2:+27111962 | Msa1242640:CDS |
| ATATCAATGAGGGTTGAAAG+TGG | 0.625536 | 8_2:-27111632 | None:intergenic |
| TCTGATTCATGCCACAGTGG+TGG | 0.633718 | 8_2:+27111380 | Msa1242640:CDS |
| GATTGCGTCGTCATACACAC+AGG | 0.635567 | 8_2:+27111546 | Msa1242640:CDS |
| TCTTCCTGCTGAAACTGGAG+AGG | 0.636836 | 8_2:+27110378 | Msa1242640:CDS |
| GCAGATAGGAGAGAGCACAA+AGG | 0.640959 | 8_2:+27111424 | Msa1242640:CDS |
| GAGGATGCGTAAACGACGTG+TGG | 0.642474 | 8_2:+27110170 | Msa1242640:CDS |
| ACCTATTCTTCACTCCATGT+GGG | 0.644192 | 8_2:-27111604 | None:intergenic |
| GTGGCATGAATCAGATACAA+TGG | 0.644776 | 8_2:-27111372 | None:intergenic |
| ATATAGATGTTGGTCAACTG+AGG | 0.645754 | 8_2:+27111681 | Msa1242640:CDS |
| GCTATAATTGAGGAGACTGA+TGG | 0.648617 | 8_2:+27112070 | Msa1242640:CDS |
| CGACACGGATTCGTCGTACA+CGG | 0.650792 | 8_2:+27110255 | Msa1242640:CDS |
| GGAGCTGGTCAGATCTTCGG+AGG | 0.651252 | 8_2:+27110312 | Msa1242640:CDS |
| TTTGTGGATGGGGTTCCTAG+AGG | 0.655242 | 8_2:+27111338 | Msa1242640:CDS |
| GAGGATGCTATTGAGTCAAG+GGG | 0.661263 | 8_2:+27111506 | Msa1242640:CDS |
| TATGACGACGCAATCCTGAA+GGG | 0.661269 | 8_2:-27111538 | None:intergenic |
| ATTGATCGGAATCAACTACC+CGG | 0.662029 | 8_2:+27110129 | Msa1242640:CDS |
| AGGGATATCGAACTCCCACA+TGG | 0.666782 | 8_2:+27111590 | Msa1242640:CDS |
| TTGATCGGAATCAACTACCC+GGG | 0.674290 | 8_2:+27110130 | Msa1242640:CDS |
| CTTCTTCTAAGATCCAACAA+TGG | 0.675766 | 8_2:+27110093 | Msa1242640:exon |
| AACATGGAGAAACACACAGA+CGG | 0.676635 | 8_2:-27112337 | None:intergenic |
| ATTAACATACGACTATAACA+TGG | 0.687734 | 8_2:-27112353 | None:intergenic |
| ACAAGAAAGGATCATCAACA+TGG | 0.709272 | 8_2:-27112186 | None:intergenic |
| TCAAAGCGCGGTCTTCCAAG+CGG | 0.713263 | 8_2:+27111944 | Msa1242640:CDS |
| TTGAACAAGCTCCAGCATGG+AGG | 0.724624 | 8_2:+27111770 | Msa1242640:CDS |
| TATGCTGGATCATCAAAGCG+CGG | 0.727544 | 8_2:+27111932 | Msa1242640:CDS |
| ATTGCGTCGTCATACACACA+GGG | 0.734226 | 8_2:+27111547 | Msa1242640:CDS |
| GGAACAAAAGCAGAATTACG+AGG | 0.740123 | 8_2:+27110151 | Msa1242640:CDS |
| CTTCAATCAAGCCACCACTG+TGG | 0.744555 | 8_2:-27111391 | None:intergenic |
| GTATCTGATTCATGCCACAG+TGG | 0.772525 | 8_2:+27111377 | Msa1242640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGTCTTTAAATTAAAAA+AGG | + | chr8_2:27111058-27111077 | Msa1242640:intron | 10.0% |
| !! | TGTAATCTTTATATTTATAT+AGG | + | chr8_2:27111220-27111239 | Msa1242640:intron | 10.0% |
| !! | GTAATCTTTATATTTATATA+GGG | + | chr8_2:27111221-27111240 | Msa1242640:intron | 10.0% |
| !! | TAATAACATAAATATTCCTT+TGG | - | chr8_2:27112404-27112423 | None:intergenic | 15.0% |
| !! | TATGATTATTAAAATGATAG+TGG | - | chr8_2:27112450-27112469 | None:intergenic | 15.0% |
| !!! | ATTTTAATAATCATATCTGT+TGG | + | chr8_2:27112455-27112474 | Msa1242640:three_prime_UTR | 15.0% |
| !! | AAAAAAAAAAAAAATCAGAC+TGG | + | chr8_2:27112504-27112523 | Msa1242640:three_prime_UTR | 15.0% |
| !!! | AAAAGGTTTCAATGATTTTT+TGG | - | chr8_2:27110060-27110079 | None:intergenic | 20.0% |
| !! | AAAAATGAGTGTAGTTTATT+TGG | - | chr8_2:27110468-27110487 | None:intergenic | 20.0% |
| !!! | TCTGTTTTTGTTTTGATTAA+GGG | + | chr8_2:27110501-27110520 | Msa1242640:intron | 20.0% |
| !!! | CATGTTTTATTTTGTGTTTT+TGG | + | chr8_2:27110541-27110560 | Msa1242640:intron | 20.0% |
| !! | TTTAAAAAGTTTCTTGTAGT+TGG | - | chr8_2:27110708-27110727 | None:intergenic | 20.0% |
| !!! | TACTTTAATTTGATCTTTCT+TGG | + | chr8_2:27110734-27110753 | Msa1242640:intron | 20.0% |
| !! | TTTCTATTCATGTATACTAA+GGG | - | chr8_2:27111134-27111153 | None:intergenic | 20.0% |
| ! | GAAGATGAAGGAAAAAAAAA+AGG | - | chr8_2:27110077-27110096 | None:intergenic | 25.0% |
| !!! | CTCTGTTTTTGTTTTGATTA+AGG | + | chr8_2:27110500-27110519 | Msa1242640:intron | 25.0% |
| !!! | TTTTGTGTTTTTGGATCTTT+TGG | + | chr8_2:27110550-27110569 | Msa1242640:intron | 25.0% |
| !!! | CTTGATTTGATTTGTTGATA+AGG | + | chr8_2:27110663-27110682 | Msa1242640:intron | 25.0% |
| ! | CTCAATTAAAATTCGAACAT+TGG | - | chr8_2:27110854-27110873 | None:intergenic | 25.0% |
| ! | CTTTCTATTCATGTATACTA+AGG | - | chr8_2:27111135-27111154 | None:intergenic | 25.0% |
| ! | CTTAGTATACATGAATAGAA+AGG | + | chr8_2:27111133-27111152 | Msa1242640:intron | 25.0% |
| ! | ATGTTATTAGTGAGTAGTAA+TGG | + | chr8_2:27111252-27111271 | Msa1242640:intron | 25.0% |
| ! | ATGAAGAAACAAATGAAGAT+AGG | + | chr8_2:27111570-27111589 | Msa1242640:CDS | 25.0% |
| ! | TGAAGAAACAAATGAAGATA+GGG | + | chr8_2:27111571-27111590 | Msa1242640:CDS | 25.0% |
| ! | TTCATAAACTTCTTCACTTT+AGG | - | chr8_2:27111743-27111762 | None:intergenic | 25.0% |
| ! | TCATGCAAAAAGAGAATAAT+GGG | + | chr8_2:27112226-27112245 | Msa1242640:three_prime_UTR | 25.0% |
| ! | ATTAACATACGACTATAACA+TGG | - | chr8_2:27112356-27112375 | None:intergenic | 25.0% |
| !! | TTTGTTCATTATAGTGGACA+TGG | + | chr8_2:27110349-27110368 | Msa1242640:CDS | 30.0% |
| !! | TTGTTCATTATAGTGGACAT+GGG | + | chr8_2:27110350-27110369 | Msa1242640:CDS | 30.0% |
| TGATAAGGAATATCCAGATA+CGG | + | chr8_2:27110678-27110697 | Msa1242640:intron | 30.0% | |
| ATTTCGTGTAGAGATAGAAA+TGG | + | chr8_2:27110760-27110779 | Msa1242640:intron | 30.0% | |
| !! | TAAAATTCGAACATTGGTTC+CGG | - | chr8_2:27110848-27110867 | None:intergenic | 30.0% |
| ATGAATAGAAAGGAACAGAA+GGG | + | chr8_2:27111143-27111162 | Msa1242640:intron | 30.0% | |
| TGATGATTTCAAGGAATTTG+TGG | + | chr8_2:27111322-27111341 | Msa1242640:CDS | 30.0% | |
| ATTTCAAGGAATTTGTGGAT+GGG | + | chr8_2:27111327-27111346 | Msa1242640:CDS | 30.0% | |
| ATATACTTGAGCAGAAAACT+GGG | + | chr8_2:27111651-27111670 | Msa1242640:CDS | 30.0% | |
| GGGAAAGAAAATATAGATGT+TGG | + | chr8_2:27111671-27111690 | Msa1242640:CDS | 30.0% | |
| !! | CTACACTTTTTGACGTTTTT+GGG | + | chr8_2:27111705-27111724 | Msa1242640:CDS | 30.0% |
| !! | TACACTTTTTGACGTTTTTG+GGG | + | chr8_2:27111706-27111725 | Msa1242640:CDS | 30.0% |
| ! | CTTTTGCTTAAGAAACTCTT+GGG | - | chr8_2:27111843-27111862 | None:intergenic | 30.0% |
| ! | AAAGCTGAATGATAATGATG+AGG | + | chr8_2:27111859-27111878 | Msa1242640:CDS | 30.0% |
| ! | AAGCTGAATGATAATGATGA+GGG | + | chr8_2:27111860-27111879 | Msa1242640:CDS | 30.0% |
| AAAACATATCAGCACAAGAA+AGG | - | chr8_2:27112202-27112221 | None:intergenic | 30.0% | |
| CTCATGCAAAAAGAGAATAA+TGG | + | chr8_2:27112225-27112244 | Msa1242640:three_prime_UTR | 30.0% | |
| ! | TTTTGTAACAAACTTGACGA+TGG | + | chr8_2:27112295-27112314 | Msa1242640:three_prime_UTR | 30.0% |
| TGGATCTTAGAAGAAGATGA+AGG | - | chr8_2:27110089-27110108 | None:intergenic | 35.0% | |
| !! | CTTCTTCTAAGATCCAACAA+TGG | + | chr8_2:27110093-27110112 | Msa1242640:exon | 35.0% |
| ! | GTAGTTGATTCCGATCAATA+CGG | - | chr8_2:27110128-27110147 | None:intergenic | 35.0% |
| AAATGCTTGATCGAACGTTA+CGG | + | chr8_2:27110202-27110221 | Msa1242640:CDS | 35.0% | |
| CAAAACAGTGATGTCATCTT+CGG | - | chr8_2:27110233-27110252 | None:intergenic | 35.0% | |
| ! | CTGCTGTTTGTTCATTATAG+TGG | + | chr8_2:27110343-27110362 | Msa1242640:CDS | 35.0% |
| GTGATGAGATTCATATCAGA+AGG | - | chr8_2:27110436-27110455 | None:intergenic | 35.0% | |
| TCTGATATGAATCTCATCAC+TGG | + | chr8_2:27110436-27110455 | Msa1242640:CDS | 35.0% | |
| AGATAAGATTGTCTCCATAG+TGG | + | chr8_2:27110799-27110818 | Msa1242640:intron | 35.0% | |
| TGAGAGATGTGCATACATTT+AGG | + | chr8_2:27110870-27110889 | Msa1242640:intron | 35.0% | |
| GAGAGATGTGCATACATTTA+GGG | + | chr8_2:27110871-27110890 | Msa1242640:intron | 35.0% | |
| ! | CATACATTTAGGGTGTGTTT+GGG | + | chr8_2:27110881-27110900 | Msa1242640:intron | 35.0% |
| ! | TGTATACTAAGGGTGTGTTT+GGG | - | chr8_2:27111124-27111143 | None:intergenic | 35.0% |
| ! | ATGTATACTAAGGGTGTGTT+TGG | - | chr8_2:27111125-27111144 | None:intergenic | 35.0% |
| CATGAATAGAAAGGAACAGA+AGG | + | chr8_2:27111142-27111161 | Msa1242640:intron | 35.0% | |
| GTGAACAGATGATGATTTCA+AGG | + | chr8_2:27111313-27111332 | Msa1242640:intron | 35.0% | |
| GATTTCAAGGAATTTGTGGA+TGG | + | chr8_2:27111326-27111345 | Msa1242640:CDS | 35.0% | |
| TTTCAAGGAATTTGTGGATG+GGG | + | chr8_2:27111328-27111347 | Msa1242640:CDS | 35.0% | |
| ATATCAATGAGGGTTGAAAG+TGG | - | chr8_2:27111635-27111654 | None:intergenic | 35.0% | |
| CTGCTCAAGTATATCAATGA+GGG | - | chr8_2:27111645-27111664 | None:intergenic | 35.0% | |
| TCTGCTCAAGTATATCAATG+AGG | - | chr8_2:27111646-27111665 | None:intergenic | 35.0% | |
| GATATACTTGAGCAGAAAAC+TGG | + | chr8_2:27111650-27111669 | Msa1242640:CDS | 35.0% | |
| ATATAGATGTTGGTCAACTG+AGG | + | chr8_2:27111681-27111700 | Msa1242640:CDS | 35.0% | |
| ! | CCAAAAACGTCAAAAAGTGT+AGG | - | chr8_2:27111707-27111726 | None:intergenic | 35.0% |
| !! | CCTACACTTTTTGACGTTTT+TGG | + | chr8_2:27111704-27111723 | Msa1242640:CDS | 35.0% |
| ! | GCTTTTGCTTAAGAAACTCT+TGG | - | chr8_2:27111844-27111863 | None:intergenic | 35.0% |
| AGTAAGCATGAAGTATATGC+TGG | + | chr8_2:27111917-27111936 | Msa1242640:CDS | 35.0% | |
| ATAAGCATTAGCTGCATTTC+CGG | - | chr8_2:27112026-27112045 | None:intergenic | 35.0% | |
| TGCAATACAGGCTATAATTG+AGG | + | chr8_2:27112060-27112079 | Msa1242640:CDS | 35.0% | |
| ! | TGATGGTGCAATTACATACT+CGG | + | chr8_2:27112087-27112106 | Msa1242640:CDS | 35.0% |
| ACAAGAAAGGATCATCAACA+TGG | - | chr8_2:27112189-27112208 | None:intergenic | 35.0% | |
| AACAATGAATGTTGCTCCAA+AGG | + | chr8_2:27112385-27112404 | Msa1242640:three_prime_UTR | 35.0% | |
| ATTGATCGGAATCAACTACC+CGG | + | chr8_2:27110129-27110148 | Msa1242640:CDS | 40.0% | |
| !! | GTAATTCTGCTTTTGTTCCC+GGG | - | chr8_2:27110150-27110169 | None:intergenic | 40.0% |
| !! | CGTAATTCTGCTTTTGTTCC+CGG | - | chr8_2:27110151-27110170 | None:intergenic | 40.0% |
| GGAACAAAAGCAGAATTACG+AGG | + | chr8_2:27110151-27110170 | Msa1242640:CDS | 40.0% | |
| !!! | CATCACTGTTTTGATCGACA+CGG | + | chr8_2:27110240-27110259 | Msa1242640:CDS | 40.0% |
| CGTCTTATGTTCTTTCCTGT+CGG | - | chr8_2:27110283-27110302 | None:intergenic | 40.0% | |
| GAACATAAGACGTGTTCTGT+CGG | + | chr8_2:27110291-27110310 | Msa1242640:CDS | 40.0% | |
| TGTAGTTGGAATTCCGTATC+TGG | - | chr8_2:27110694-27110713 | None:intergenic | 40.0% | |
| GATTCTGGTCAATTCCACTA+TGG | - | chr8_2:27110816-27110835 | None:intergenic | 40.0% | |
| ! | GCATACATTTAGGGTGTGTT+TGG | + | chr8_2:27110880-27110899 | Msa1242640:intron | 40.0% |
| GTGGCATGAATCAGATACAA+TGG | - | chr8_2:27111375-27111394 | None:intergenic | 40.0% | |
| TGGCTTGATTGAAGAAGCTA+AGG | + | chr8_2:27111400-27111419 | Msa1242640:CDS | 40.0% | |
| AAAGCCTGATAATCCAAAGC+CGG | - | chr8_2:27111471-27111490 | None:intergenic | 40.0% | |
| GATTATCAGGCTTTCTGCAT+AGG | + | chr8_2:27111477-27111496 | Msa1242640:CDS | 40.0% | |
| CTTTCTGCATAGGAAAGTTG+AGG | + | chr8_2:27111487-27111506 | Msa1242640:CDS | 40.0% | |
| TTGAGGATGCTATTGAGTCA+AGG | + | chr8_2:27111504-27111523 | Msa1242640:CDS | 40.0% | |
| TGAGGATGCTATTGAGTCAA+GGG | + | chr8_2:27111505-27111524 | Msa1242640:CDS | 40.0% | |
| ACCTATTCTTCACTCCATGT+GGG | - | chr8_2:27111607-27111626 | None:intergenic | 40.0% | |
| GGAAATGCAGCTAATGCTTA+TGG | + | chr8_2:27112025-27112044 | Msa1242640:CDS | 40.0% | |
| AGCTTTCAGCAATGCAATAC+AGG | + | chr8_2:27112048-27112067 | Msa1242640:CDS | 40.0% | |
| GCTATAATTGAGGAGACTGA+TGG | + | chr8_2:27112070-27112089 | Msa1242640:CDS | 40.0% | |
| ATACTCGGAGCTTATTCTCA+AGG | + | chr8_2:27112102-27112121 | Msa1242640:CDS | 40.0% | |
| AACATGGAGAAACACACAGA+CGG | - | chr8_2:27112340-27112359 | None:intergenic | 40.0% | |
| TCATATCTGTTGGCACAAAC+TGG | + | chr8_2:27112465-27112484 | Msa1242640:three_prime_UTR | 40.0% | |
| ! | GCGAGAAAAGCCGTATTGAT+CGG | + | chr8_2:27110115-27110134 | Msa1242640:CDS | 45.0% |
| TTGATCGGAATCAACTACCC+GGG | + | chr8_2:27110130-27110149 | Msa1242640:CDS | 45.0% | |
| ACTGGAGAGGATGATGATAC+TGG | + | chr8_2:27110391-27110410 | Msa1242640:CDS | 45.0% | |
| TGGTTAGTAGAGCTTTCGTC+TGG | + | chr8_2:27110570-27110589 | Msa1242640:intron | 45.0% | |
| !! | AATTCGAACATTGGTTCCGG+AGG | - | chr8_2:27110845-27110864 | None:intergenic | 45.0% |
| ! | TTTAGGGTGTGTTTGGGAAG+AGG | + | chr8_2:27110887-27110906 | Msa1242640:intron | 45.0% |
| TTAGGGTGTGTTTGGGAAGA+GGG | + | chr8_2:27110888-27110907 | Msa1242640:intron | 45.0% | |
| TGTGTTTGGGAAGAGGGTTT+AGG | + | chr8_2:27110894-27110913 | Msa1242640:intron | 45.0% | |
| TTTGGGAAGAGGGTTTAGGA+GGG | + | chr8_2:27110898-27110917 | Msa1242640:intron | 45.0% | |
| TTTGGGAAGAGGGTTTAGGA+GGG | - | chr8_2:27110898-27110917 | None:intergenic | 45.0% | |
| TGTGTTTGGGAAGAGGGTTT+AGG | - | chr8_2:27110894-27110913 | None:intergenic | 45.0% | |
| ! | TAAGGGTGTGTTTGGGAAGA+GGG | - | chr8_2:27111117-27111136 | None:intergenic | 45.0% |
| GTATCTGATTCATGCCACAG+TGG | + | chr8_2:27111377-27111396 | Msa1242640:CDS | 45.0% | |
| GAAGAAGCTAAGGAGCAGAT+AGG | + | chr8_2:27111410-27111429 | Msa1242640:CDS | 45.0% | |
| ! | CAGATAGGAGAGAGCACAAA+GGG | + | chr8_2:27111425-27111444 | Msa1242640:CDS | 45.0% |
| AAGGGAGAAGAGGAACATTC+TGG | + | chr8_2:27111443-27111462 | Msa1242640:CDS | 45.0% | |
| GAAGAGGAACATTCTGGATC+CGG | + | chr8_2:27111449-27111468 | Msa1242640:CDS | 45.0% | |
| GAGGATGCTATTGAGTCAAG+GGG | + | chr8_2:27111506-27111525 | Msa1242640:CDS | 45.0% | |
| TATGACGACGCAATCCTGAA+GGG | - | chr8_2:27111541-27111560 | None:intergenic | 45.0% | |
| ATTGCGTCGTCATACACACA+GGG | + | chr8_2:27111547-27111566 | Msa1242640:CDS | 45.0% | |
| TCCCACATGGAGTGAAGAAT+AGG | + | chr8_2:27111603-27111622 | Msa1242640:CDS | 45.0% | |
| GACCTATTCTTCACTCCATG+TGG | - | chr8_2:27111608-27111627 | None:intergenic | 45.0% | |
| ATCTTGAACAAGCTCCAGCA+TGG | + | chr8_2:27111767-27111786 | Msa1242640:CDS | 45.0% | |
| ACAAGGTGGGATATTGGGAA+TGG | + | chr8_2:27111805-27111824 | Msa1242640:CDS | 45.0% | |
| TATGCTGGATCATCAAAGCG+CGG | + | chr8_2:27111932-27111951 | Msa1242640:CDS | 45.0% | |
| AGAGCGAAGCTACAGAAAGA+TGG | + | chr8_2:27112127-27112146 | Msa1242640:CDS | 45.0% | |
| ! | GATGGATTCACTCAAAAGCC+AGG | + | chr8_2:27112145-27112164 | Msa1242640:CDS | 45.0% |
| TGATCACTGCAATAGAGTCC+TGG | - | chr8_2:27112166-27112185 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTATTTAG+AGG | - | chr8_2:27112494-27112513 | Msa1242650:three_prime_UTR | 5.0% |
| ! | ACGGCTTTTCTCGCCATTGT+TGG | - | chr8_2:27110109-27110128 | None:intergenic | 50.0% |
| ACTCGTCTTCCTGCTGAAAC+TGG | + | chr8_2:27110373-27110392 | Msa1242640:CDS | 50.0% | |
| TCTTCCTGCTGAAACTGGAG+AGG | + | chr8_2:27110378-27110397 | Msa1242640:CDS | 50.0% | |
| TCATCCTCTCCAGTTTCAGC+AGG | - | chr8_2:27110385-27110404 | None:intergenic | 50.0% | |
| GACCAGAATCTCACAACCTC+CGG | + | chr8_2:27110826-27110845 | Msa1242640:intron | 50.0% | |
| TTCCGGAGGTTGTGAGATTC+TGG | - | chr8_2:27110831-27110850 | None:intergenic | 50.0% | |
| GTTTGGGAAGAGGGTTTAGG+AGG | + | chr8_2:27110897-27110916 | Msa1242640:intron | 50.0% | |
| TTGGGAAGAGGGTTTAGGAG+GGG | + | chr8_2:27110899-27110918 | Msa1242640:intron | 50.0% | |
| AAGAGGGTTTAGGAGGGGAA+GGG | + | chr8_2:27110904-27110923 | Msa1242640:intron | 50.0% | |
| AAGAGGGTTTAGGAGGGGAA+GGG | - | chr8_2:27110904-27110923 | None:intergenic | 50.0% | |
| TTGGGAAGAGGGTTTAGGAG+GGG | - | chr8_2:27110899-27110918 | None:intergenic | 50.0% | |
| GTTTGGGAAGAGGGTTTAGG+AGG | - | chr8_2:27110897-27110916 | None:intergenic | 50.0% | |
| ! | CTAAGGGTGTGTTTGGGAAG+AGG | - | chr8_2:27111118-27111137 | None:intergenic | 50.0% |
| AAGGAACAGAAGGGAACGTG+TGG | + | chr8_2:27111152-27111171 | Msa1242640:intron | 50.0% | |
| TTTGTGGATGGGGTTCCTAG+AGG | + | chr8_2:27111338-27111357 | Msa1242640:CDS | 50.0% | |
| ATGGGGTTCCTAGAGGATGT+AGG | + | chr8_2:27111345-27111364 | Msa1242640:CDS | 50.0% | |
| ATGGTCAGCCTACATCCTCT+AGG | - | chr8_2:27111356-27111375 | None:intergenic | 50.0% | |
| TCTGATTCATGCCACAGTGG+TGG | + | chr8_2:27111380-27111399 | Msa1242640:CDS | 50.0% | |
| CTTCAATCAAGCCACCACTG+TGG | - | chr8_2:27111394-27111413 | None:intergenic | 50.0% | |
| ! | GCAGATAGGAGAGAGCACAA+AGG | + | chr8_2:27111424-27111443 | Msa1242640:CDS | 50.0% |
| ! | AGAGAGCACAAAGGGAGAAG+AGG | + | chr8_2:27111433-27111452 | Msa1242640:CDS | 50.0% |
| GAACATTCTGGATCCGGCTT+TGG | + | chr8_2:27111455-27111474 | Msa1242640:CDS | 50.0% | |
| !! | GGATCCGGCTTTGGATTATC+AGG | + | chr8_2:27111464-27111483 | Msa1242640:CDS | 50.0% |
| AGGGGATTTCATGTCCCTTC+AGG | + | chr8_2:27111524-27111543 | Msa1242640:CDS | 50.0% | |
| GTATGACGACGCAATCCTGA+AGG | - | chr8_2:27111542-27111561 | None:intergenic | 50.0% | |
| GATTGCGTCGTCATACACAC+AGG | + | chr8_2:27111546-27111565 | Msa1242640:CDS | 50.0% | |
| AGGGATATCGAACTCCCACA+TGG | + | chr8_2:27111590-27111609 | Msa1242640:CDS | 50.0% | |
| TTGAACAAGCTCCAGCATGG+AGG | + | chr8_2:27111770-27111789 | Msa1242640:CDS | 50.0% | |
| AGGTGGACAAGGTGGGATAT+TGG | + | chr8_2:27111799-27111818 | Msa1242640:CDS | 50.0% | |
| GGTGGACAAGGTGGGATATT+GGG | + | chr8_2:27111800-27111819 | Msa1242640:CDS | 50.0% | |
| AGGTGGGATATTGGGAATGG+TGG | + | chr8_2:27111808-27111827 | Msa1242640:CDS | 50.0% | |
| GGTGGGATATTGGGAATGGT+GGG | + | chr8_2:27111809-27111828 | Msa1242640:CDS | 50.0% | |
| GACAAGCATCTGCTGAAGTC+TGG | - | chr8_2:27112000-27112019 | None:intergenic | 50.0% | |
| GACTGGGAAAGTAGATGGCT+AGG | - | chr8_2:27112545-27112564 | Msa1242650:three_prime_UTR | 50.0% | |
| GAGGATGCGTAAACGACGTG+TGG | + | chr8_2:27110170-27110189 | Msa1242640:CDS | 55.0% | |
| GATGCGTAAACGACGTGTGG+AGG | + | chr8_2:27110173-27110192 | Msa1242640:CDS | 55.0% | |
| CGACACGGATTCGTCGTACA+CGG | + | chr8_2:27110255-27110274 | Msa1242640:CDS | 55.0% | |
| AAGACGTGTTCTGTCGGAGC+TGG | + | chr8_2:27110297-27110316 | Msa1242640:CDS | 55.0% | |
| GTCGGAGCTGGTCAGATCTT+CGG | + | chr8_2:27110309-27110328 | Msa1242640:CDS | 55.0% | |
| CTGGTCAGATCTTCGGAGGA+TGG | + | chr8_2:27110316-27110335 | Msa1242640:CDS | 55.0% | |
| GAAGAGGGTTTAGGAGGGGA+AGG | + | chr8_2:27110903-27110922 | Msa1242640:intron | 55.0% | |
| GAAGAGGGTTTAGGAGGGGA+AGG | - | chr8_2:27110903-27110922 | None:intergenic | 55.0% | |
| AACAAGCTCCAGCATGGAGG+TGG | + | chr8_2:27111773-27111792 | Msa1242640:CDS | 55.0% | |
| GTGGTGAAGGTGGACAAGGT+GGG | + | chr8_2:27111792-27111811 | Msa1242640:CDS | 55.0% | |
| GGGATATGCAAAGCCTGCCA+TGG | + | chr8_2:27111880-27111899 | Msa1242640:CDS | 55.0% | |
| TGCAAAGCCTGCCATGGAGA+CGG | + | chr8_2:27111886-27111905 | Msa1242640:CDS | 55.0% | |
| ACTTCCCACTTCCGTCTCCA+TGG | - | chr8_2:27111900-27111919 | None:intergenic | 55.0% | |
| TCAAAGCGCGGTCTTCCAAG+CGG | + | chr8_2:27111944-27111963 | Msa1242640:CDS | 55.0% | |
| CTCATCAGAATCCCACCGCT+TGG | - | chr8_2:27111962-27111981 | None:intergenic | 55.0% | |
| AGCGGTGGGATTCTGATGAG+CGG | + | chr8_2:27111962-27111981 | Msa1242640:CDS | 55.0% | |
| TCAGCAGATGCTTGTCCTGC+CGG | + | chr8_2:27112004-27112023 | Msa1242640:CDS | 55.0% | |
| GCATTAGCTGCATTTCCGGC+AGG | - | chr8_2:27112022-27112041 | None:intergenic | 55.0% | |
| GGAGCTGGTCAGATCTTCGG+AGG | + | chr8_2:27110312-27110331 | Msa1242640:CDS | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr8_2:27110907-27110926 | Msa1242640:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr8_2:27110908-27110927 | Msa1242640:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr8_2:27110909-27110928 | Msa1242640:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr8_2:27110909-27110928 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr8_2:27110908-27110927 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr8_2:27110907-27110926 | None:intergenic | 60.0% | |
| CTCCAGCATGGAGGTGGTGA+AGG | + | chr8_2:27111779-27111798 | Msa1242640:CDS | 60.0% | |
| CACCTTCACCACCTCCATGC+TGG | - | chr8_2:27111784-27111803 | None:intergenic | 60.0% | |
| CAGCATGGAGGTGGTGAAGG+TGG | + | chr8_2:27111782-27111801 | Msa1242640:CDS | 60.0% | |
| GGAGGTGGTGAAGGTGGACA+AGG | + | chr8_2:27111788-27111807 | Msa1242640:CDS | 60.0% | |
| GGTGGTGAAGGTGGACAAGG+TGG | + | chr8_2:27111791-27111810 | Msa1242640:CDS | 60.0% | |
| CCTGCCATGGAGACGGAAGT+GGG | + | chr8_2:27111893-27111912 | Msa1242640:CDS | 60.0% | |
| TCGTCGTACACGGAGCCGAC+AGG | + | chr8_2:27110265-27110284 | Msa1242640:CDS | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr8_2:27110912-27110931 | Msa1242640:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr8_2:27110913-27110932 | Msa1242640:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr8_2:27110913-27110932 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr8_2:27110912-27110931 | None:intergenic | 65.0% | |
| GCCTGCCATGGAGACGGAAG+TGG | + | chr8_2:27111892-27111911 | Msa1242640:CDS | 65.0% | |
| CCCACTTCCGTCTCCATGGC+AGG | - | chr8_2:27111896-27111915 | None:intergenic | 65.0% | |
| AAGCGCGGTCTTCCAAGCGG+TGG | + | chr8_2:27111947-27111966 | Msa1242640:CDS | 65.0% | |
| AGCGCGGTCTTCCAAGCGGT+GGG | + | chr8_2:27111948-27111967 | Msa1242640:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 27110015 | 27112567 | 27110015 | ID=Msa1242640;Name=Msa1242640 |
| chr8_2 | mRNA | 27110015 | 27112567 | 27110015 | ID=Msa1242640-mRNA-1;Parent=Msa1242640;Name=Msa1242640-mRNA-1;_AED=0.01;_eAED=0.01;_QI=97|1|1|1|1|1|2|354|412 |
| chr8_2 | exon | 27110015 | 27110457 | 27110015 | ID=Msa1242640-mRNA-1:exon:9505;Parent=Msa1242640-mRNA-1 |
| chr8_2 | exon | 27111321 | 27112567 | 27111321 | ID=Msa1242640-mRNA-1:exon:9506;Parent=Msa1242640-mRNA-1 |
| chr8_2 | five_prime_UTR | 27110015 | 27110111 | 27110015 | ID=Msa1242640-mRNA-1:five_prime_utr;Parent=Msa1242640-mRNA-1 |
| chr8_2 | CDS | 27110112 | 27110457 | 27110112 | ID=Msa1242640-mRNA-1:cds;Parent=Msa1242640-mRNA-1 |
| chr8_2 | CDS | 27111321 | 27112213 | 27111321 | ID=Msa1242640-mRNA-1:cds;Parent=Msa1242640-mRNA-1 |
| chr8_2 | three_prime_UTR | 27112214 | 27112567 | 27112214 | ID=Msa1242640-mRNA-1:three_prime_utr;Parent=Msa1242640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
