Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841020 | XP_003612790.3 | 89.948 | 577 | 46 | 3 | 1 | 565 | 6 | 582 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841020 | G7KCA3 | 89.948 | 577 | 46 | 3 | 1 | 565 | 2 | 578 | 0.0 | 951 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0687230 | Msa0841020 | 0.813377 | 2.640071e-51 | -8.615850e-47 |
| Msa0704800 | Msa0841020 | 0.818455 | 1.942835e-52 | -8.615850e-47 |
| Msa0841020 | Msa1025940 | 0.817616 | 3.006133e-52 | -8.615850e-47 |
| Msa0841020 | Msa1030930 | 0.802747 | 4.844615e-49 | -8.615850e-47 |
| Msa0478580 | Msa0841020 | 0.802538 | 5.350990e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841020 | MtrunA17_Chr5g0410601 | 85.269 | 577 | 44 | 4 | 1 | 565 | 6 | 553 | 0.0 | 879 |
| Msa0841020 | MtrunA17_Chr3g0132181 | 41.991 | 231 | 127 | 3 | 335 | 560 | 549 | 777 | 4.58e-48 | 179 |
| Msa0841020 | MtrunA17_Chr3g0120851 | 41.991 | 231 | 126 | 4 | 334 | 558 | 445 | 673 | 2.44e-47 | 176 |
| Msa0841020 | MtrunA17_Chr3g0126501 | 41.202 | 233 | 130 | 3 | 334 | 561 | 463 | 693 | 6.49e-46 | 172 |
| Msa0841020 | MtrunA17_Chr5g0447431 | 37.970 | 266 | 147 | 7 | 307 | 558 | 420 | 681 | 3.96e-43 | 164 |
| Msa0841020 | MtrunA17_Chr1g0178901 | 32.759 | 232 | 147 | 4 | 333 | 558 | 416 | 644 | 1.51e-36 | 144 |
| Msa0841020 | MtrunA17_Chr1g0172601 | 33.929 | 224 | 140 | 7 | 338 | 558 | 157 | 375 | 7.09e-34 | 132 |
| Msa0841020 | MtrunA17_Chr6g0476751 | 33.790 | 219 | 138 | 3 | 347 | 560 | 467 | 683 | 1.40e-33 | 136 |
| Msa0841020 | MtrunA17_Chr2g0286511 | 31.967 | 244 | 153 | 7 | 324 | 560 | 433 | 670 | 4.35e-30 | 125 |
| Msa0841020 | MtrunA17_Chr2g0286511 | 34.156 | 243 | 133 | 12 | 333 | 559 | 713 | 944 | 7.45e-25 | 109 |
| Msa0841020 | MtrunA17_Chr1g0191281 | 30.488 | 246 | 156 | 8 | 321 | 558 | 410 | 648 | 8.33e-30 | 124 |
| Msa0841020 | MtrunA17_Chr4g0066631 | 34.043 | 235 | 143 | 6 | 338 | 565 | 433 | 662 | 9.41e-30 | 124 |
| Msa0841020 | MtrunA17_Chr4g0066631 | 34.583 | 240 | 142 | 8 | 327 | 558 | 720 | 952 | 4.77e-27 | 116 |
| Msa0841020 | MtrunA17_Chr7g0273491 | 29.134 | 254 | 167 | 8 | 314 | 561 | 439 | 685 | 1.33e-25 | 112 |
| Msa0841020 | MtrunA17_Chr7g0273491 | 32.287 | 223 | 128 | 8 | 342 | 554 | 870 | 1079 | 8.91e-23 | 103 |
| Msa0841020 | MtrunA17_Chr8g0338171 | 31.034 | 203 | 117 | 7 | 370 | 565 | 1 | 187 | 1.85e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841020 | AT2G35540.1 | 43.059 | 353 | 182 | 9 | 215 | 559 | 247 | 588 | 1.18e-78 | 259 |
| Msa0841020 | AT5G35753.1 | 35.470 | 234 | 142 | 5 | 335 | 562 | 196 | 426 | 1.13e-41 | 155 |
| Msa0841020 | AT2G05230.1 | 35.443 | 237 | 144 | 5 | 335 | 565 | 473 | 706 | 1.80e-40 | 156 |
| Msa0841020 | AT2G05250.1 | 35.443 | 237 | 144 | 5 | 335 | 565 | 473 | 706 | 1.80e-40 | 156 |
| Msa0841020 | AT5G53150.4 | 37.500 | 232 | 137 | 4 | 329 | 554 | 442 | 671 | 1.40e-38 | 151 |
| Msa0841020 | AT5G53150.1 | 37.500 | 232 | 137 | 4 | 329 | 554 | 442 | 671 | 1.40e-38 | 151 |
| Msa0841020 | AT5G53150.3 | 37.500 | 232 | 137 | 4 | 329 | 554 | 471 | 700 | 1.42e-38 | 151 |
| Msa0841020 | AT5G53150.6 | 37.500 | 232 | 137 | 4 | 329 | 554 | 471 | 700 | 1.42e-38 | 151 |
| Msa0841020 | AT5G53150.2 | 37.500 | 232 | 137 | 4 | 329 | 554 | 471 | 700 | 1.42e-38 | 151 |
| Msa0841020 | AT2G25560.1 | 40.260 | 231 | 128 | 5 | 334 | 558 | 423 | 649 | 3.02e-37 | 147 |
| Msa0841020 | AT5G50115.1 | 35.242 | 227 | 117 | 6 | 334 | 560 | 266 | 462 | 3.28e-29 | 121 |
| Msa0841020 | AT3G06340.2 | 29.661 | 236 | 153 | 5 | 328 | 557 | 421 | 649 | 2.33e-27 | 117 |
| Msa0841020 | AT3G06340.4 | 29.661 | 236 | 153 | 5 | 328 | 557 | 421 | 649 | 2.33e-27 | 117 |
| Msa0841020 | AT3G06340.3 | 29.661 | 236 | 153 | 5 | 328 | 557 | 421 | 649 | 2.33e-27 | 117 |
| Msa0841020 | AT3G06340.1 | 29.661 | 236 | 153 | 5 | 328 | 557 | 421 | 649 | 2.33e-27 | 117 |
| Msa0841020 | AT5G18750.1 | 29.787 | 235 | 149 | 7 | 335 | 557 | 396 | 626 | 9.34e-25 | 109 |
| Msa0841020 | AT5G18750.1 | 28.632 | 234 | 155 | 9 | 331 | 557 | 653 | 881 | 6.33e-18 | 88.2 |
| Msa0841020 | AT3G04980.2 | 27.126 | 247 | 157 | 7 | 328 | 564 | 483 | 716 | 1.48e-24 | 109 |
| Msa0841020 | AT3G04980.2 | 30.180 | 222 | 135 | 9 | 343 | 560 | 977 | 1182 | 7.58e-18 | 88.2 |
| Msa0841020 | AT3G04980.3 | 27.126 | 247 | 157 | 7 | 328 | 564 | 483 | 716 | 1.48e-24 | 109 |
| Msa0841020 | AT3G04980.3 | 30.180 | 222 | 135 | 9 | 343 | 560 | 977 | 1182 | 7.58e-18 | 88.2 |
| Msa0841020 | AT3G04980.1 | 27.126 | 247 | 157 | 7 | 328 | 564 | 465 | 698 | 1.76e-24 | 108 |
| Msa0841020 | AT3G04980.1 | 30.180 | 222 | 135 | 9 | 343 | 560 | 959 | 1164 | 8.59e-18 | 88.2 |
| Msa0841020 | AT5G18730.1 | 29.362 | 235 | 144 | 5 | 342 | 557 | 44 | 275 | 2.51e-24 | 107 |
| Msa0841020 | AT5G18740.1 | 28.632 | 234 | 146 | 5 | 342 | 557 | 174 | 404 | 1.05e-23 | 104 |
| Msa0841020 | AT3G04960.2 | 30.804 | 224 | 132 | 8 | 338 | 554 | 277 | 484 | 6.54e-23 | 102 |
| Msa0841020 | AT3G04960.4 | 30.804 | 224 | 132 | 8 | 338 | 554 | 326 | 533 | 8.18e-23 | 102 |
| Msa0841020 | AT3G04960.1 | 30.804 | 224 | 132 | 8 | 338 | 554 | 329 | 536 | 1.23e-22 | 102 |
| Msa0841020 | AT3G04960.3 | 30.804 | 224 | 132 | 8 | 338 | 554 | 378 | 585 | 1.31e-22 | 102 |
| Msa0841020 | AT4G27980.1 | 28.511 | 235 | 150 | 7 | 326 | 554 | 307 | 529 | 3.29e-20 | 94.7 |
| Msa0841020 | AT4G27980.3 | 28.511 | 235 | 150 | 7 | 326 | 554 | 344 | 566 | 4.17e-20 | 94.7 |
| Msa0841020 | AT4G27980.2 | 28.511 | 235 | 150 | 7 | 326 | 554 | 345 | 567 | 4.22e-20 | 94.7 |
| Msa0841020 | AT5G27240.1 | 28.938 | 273 | 163 | 13 | 304 | 560 | 435 | 692 | 6.25e-20 | 94.7 |
| Msa0841020 | AT5G27240.1 | 26.141 | 241 | 148 | 7 | 317 | 549 | 874 | 1092 | 1.15e-14 | 78.2 |
| Msa0841020 | AT5G27240.2 | 28.938 | 273 | 163 | 13 | 304 | 560 | 435 | 692 | 6.25e-20 | 94.7 |
| Msa0841020 | AT5G27240.2 | 26.141 | 241 | 148 | 7 | 317 | 549 | 874 | 1092 | 1.15e-14 | 78.2 |
| Msa0841020 | AT5G27240.3 | 28.938 | 273 | 163 | 13 | 304 | 560 | 435 | 692 | 6.25e-20 | 94.7 |
| Msa0841020 | AT5G27240.3 | 26.141 | 241 | 148 | 7 | 317 | 549 | 874 | 1092 | 1.15e-14 | 78.2 |
| Msa0841020 | AT3G05110.1 | 31.429 | 210 | 124 | 6 | 334 | 537 | 158 | 353 | 3.49e-19 | 90.1 |
Find 143 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTATCATCACGTTAAA+AGG | 0.163840 | 5_4:-16919644 | None:intergenic |
| CGTGAATTGGTTTGTGAAAA+AGG | 0.215090 | 5_4:+16918921 | Msa0841020:CDS |
| GAAGAAGATGAATGGGAAAA+AGG | 0.221390 | 5_4:+16918866 | Msa0841020:CDS |
| AAAAGAAAAGGAGGAGAAAA+TGG | 0.223877 | 5_4:+16919214 | Msa0841020:CDS |
| CGAACCTATGGAAGCCTTCT+TGG | 0.227028 | 5_4:-16919753 | None:intergenic |
| GAGTTTGAGAGAAAATATTT+AGG | 0.241307 | 5_4:+16918380 | Msa0841020:CDS |
| AGGTATGGTGATTGCGGATT+TGG | 0.245614 | 5_4:+16919316 | Msa0841020:CDS |
| ATAGTTAGTAGAGAGAAATT+AGG | 0.252344 | 5_4:+16919698 | Msa0841020:CDS |
| AGTCATGCGGTTAGATTTCT+TGG | 0.271454 | 5_4:+16920019 | Msa0841020:CDS |
| GCGGTCGGTTGGGGAGGTTT+TGG | 0.284678 | 5_4:+16919085 | Msa0841020:CDS |
| AAGAAAATGAGTTGTGAAAA+AGG | 0.286364 | 5_4:+16918554 | Msa0841020:CDS |
| TAGTTAGTAGAGAGAAATTA+GGG | 0.290359 | 5_4:+16919699 | Msa0841020:CDS |
| TCACTCCCAACAACCCTCTT+TGG | 0.293242 | 5_4:-16919119 | None:intergenic |
| CCTTCAGATTTACTTACTAT+TGG | 0.300974 | 5_4:+16920151 | Msa0841020:CDS |
| TCTTTCCGTCCCCATTGTTA+TGG | 0.318278 | 5_4:-16919676 | None:intergenic |
| GGAAGAAGAGGATGAGACTT+TGG | 0.330660 | 5_4:+16918481 | Msa0841020:CDS |
| ATCCTAAGAAAGGTTCAGTT+TGG | 0.330917 | 5_4:+16919837 | Msa0841020:CDS |
| GAAGAAGAAGATAAGACTTT+GGG | 0.333615 | 5_4:+16918813 | Msa0841020:CDS |
| GAAGAAGAGGATGAGACTTT+GGG | 0.338140 | 5_4:+16918482 | Msa0841020:CDS |
| TGGAGAGGAATTAGAGGTTA+TGG | 0.339470 | 5_4:+16919475 | Msa0841020:CDS |
| AGTTTGAGAGAAAATATTTA+GGG | 0.343212 | 5_4:+16918381 | Msa0841020:CDS |
| GCCCAAACTGAACCTTTCTT+AGG | 0.363007 | 5_4:-16919839 | None:intergenic |
| GGTGAAGTGGGTTGTGAAAA+AGG | 0.367435 | 5_4:+16919005 | Msa0841020:CDS |
| TTCGATACTGTGAAGAGAAA+AGG | 0.373277 | 5_4:+16919422 | Msa0841020:CDS |
| TACAAAATTTATCCTAAGAA+AGG | 0.384128 | 5_4:+16919827 | Msa0841020:CDS |
| TTGGATTCTGTGAAGAGAAA+AGG | 0.392753 | 5_4:+16919335 | Msa0841020:CDS |
| AGGGAATAAGCTTGTTTGTC+CGG | 0.394325 | 5_4:+16918400 | Msa0841020:CDS |
| TGAGATGAATGGTATAAGTA+TGG | 0.396471 | 5_4:+16919940 | Msa0841020:CDS |
| TGAAGAAGAAGATAAGACTT+TGG | 0.405426 | 5_4:+16918812 | Msa0841020:CDS |
| GGAAGAGAACGCGGTCGGTT+GGG | 0.406563 | 5_4:+16919075 | Msa0841020:CDS |
| GATGATGAAGTGGGTATTGT+TGG | 0.408349 | 5_4:+16919044 | Msa0841020:CDS |
| GAAGGTGAAGGGAAAAGAAA+AGG | 0.414448 | 5_4:+16919202 | Msa0841020:CDS |
| GCGTATCTTGAGAAGGTTGA+TGG | 0.415074 | 5_4:+16919962 | Msa0841020:CDS |
| TACTAGTGGAGAGGAATTAG+AGG | 0.416709 | 5_4:+16919382 | Msa0841020:CDS |
| TACTAGTGGAGAGGAATTAG+AGG | 0.416709 | 5_4:+16919469 | Msa0841020:CDS |
| TGGAGAGGAATTAGAGGTTA+TGG | 0.421686 | 5_4:+16919388 | Msa0841020:CDS |
| AACATGAAGAAGAAGATGAA+TGG | 0.424040 | 5_4:+16918858 | Msa0841020:CDS |
| GTTGAAGCTGTTATGAATGA+TGG | 0.424076 | 5_4:+16918446 | Msa0841020:CDS |
| CTCATGTTGTCGATTGTGAT+CGG | 0.428429 | 5_4:+16919789 | Msa0841020:CDS |
| ACTAGTGGAGGGGAATTAGA+AGG | 0.428632 | 5_4:+16919296 | Msa0841020:CDS |
| TCCTAAGAAAGGTTCAGTTT+GGG | 0.429041 | 5_4:+16919838 | Msa0841020:CDS |
| TGGATTCTGTGAAGAGAAAA+GGG | 0.435541 | 5_4:+16919336 | Msa0841020:CDS |
| GGGAATAAGCTTGTTTGTCC+GGG | 0.440461 | 5_4:+16918401 | Msa0841020:CDS |
| GGTTGGATTTCCATAACAAT+GGG | 0.441289 | 5_4:+16919666 | Msa0841020:CDS |
| ACATGAAGAAGAAGATGAAT+GGG | 0.441386 | 5_4:+16918859 | Msa0841020:CDS |
| GAGGGTTCTGTGAGGAGAAA+GGG | 0.442910 | 5_4:+16919248 | Msa0841020:CDS |
| AGACTGTTGGGAGCTTGATC+CGG | 0.443550 | 5_4:+16920120 | Msa0841020:CDS |
| TTTAAGGGTAATGGTGAAGT+GGG | 0.449709 | 5_4:+16918951 | Msa0841020:CDS |
| TTTAAGGGTAATGGTGAAGT+GGG | 0.449709 | 5_4:+16918993 | Msa0841020:CDS |
| GGTGAAGTGGGTTGTGAAAA+GGG | 0.451055 | 5_4:+16918963 | Msa0841020:CDS |
| TCTAAACCAAAGAGGGTTGT+TGG | 0.451810 | 5_4:+16919113 | Msa0841020:CDS |
| GAAGAGAACGCGGTCGGTTG+GGG | 0.451886 | 5_4:+16919076 | Msa0841020:CDS |
| CTAGTATCCATACGCCTCTC+AGG | 0.453841 | 5_4:-16919452 | None:intergenic |
| TCAGATTTACTTACTATTGG+TGG | 0.458174 | 5_4:+16920154 | Msa0841020:CDS |
| GAGATTTAAAGTTGCCAAGA+AGG | 0.460272 | 5_4:+16919739 | Msa0841020:CDS |
| CAAGAAGGCTTCCATAGGTT+CGG | 0.467432 | 5_4:+16919754 | Msa0841020:CDS |
| ATTAGAGGTTATGGCGGTTG+CGG | 0.469315 | 5_4:+16919397 | Msa0841020:CDS |
| TGGAGGGGAATTAGAAGGTA+TGG | 0.469390 | 5_4:+16919301 | Msa0841020:CDS |
| TGGTGAAGTGGGTTGTGAAA+AGG | 0.475503 | 5_4:+16918962 | Msa0841020:CDS |
| TGGGTATTGTTGGGAGATTG+AGG | 0.478185 | 5_4:+16919054 | Msa0841020:CDS |
| CTAAACCAAAGAGGGTTGTT+GGG | 0.479338 | 5_4:+16919114 | Msa0841020:CDS |
| TAGGGTTTAAAATACCTTGT+GGG | 0.489549 | 5_4:+16919717 | Msa0841020:CDS |
| AGGAAGAGAACGCGGTCGGT+TGG | 0.490546 | 5_4:+16919074 | Msa0841020:CDS |
| TCGATACTGTGAAGAGAAAA+GGG | 0.490658 | 5_4:+16919423 | Msa0841020:CDS |
| TAACGTGATGATAAGTTGGT+TGG | 0.491640 | 5_4:+16919649 | Msa0841020:CDS |
| TGAGGGTTCTGTGAGGAGAA+AGG | 0.501606 | 5_4:+16919247 | Msa0841020:CDS |
| GAAGACATTTACCGAACCTA+TGG | 0.505640 | 5_4:-16919765 | None:intergenic |
| GGTTGAGACTTGATAGGCAC+AGG | 0.508849 | 5_4:+16919270 | Msa0841020:CDS |
| GAAAGGGGTTGAGACTTGAT+AGG | 0.510235 | 5_4:+16919264 | Msa0841020:CDS |
| GTCATGCGGTTAGATTTCTT+GGG | 0.511704 | 5_4:+16920020 | Msa0841020:CDS |
| TTTAAGGGTGACGATGAAGT+GGG | 0.512769 | 5_4:+16918584 | Msa0841020:CDS |
| GAGAACGCGGTCGGTTGGGG+AGG | 0.517601 | 5_4:+16919079 | Msa0841020:CDS |
| ATGAATTGTTGAAAGACTGT+TGG | 0.519405 | 5_4:+16920107 | Msa0841020:CDS |
| TTGAAGCTGTTATGAATGAT+GGG | 0.522265 | 5_4:+16918447 | Msa0841020:CDS |
| GAATGATGGGTTTGACGAGG+AGG | 0.522734 | 5_4:+16918460 | Msa0841020:CDS |
| TGGTTGGATTTCCATAACAA+TGG | 0.523700 | 5_4:+16919665 | Msa0841020:CDS |
| TCATGTTGTCGATTGTGATC+GGG | 0.523896 | 5_4:+16919790 | Msa0841020:CDS |
| GTGTATGATGGTGATGATGA+TGG | 0.526875 | 5_4:+16919575 | Msa0841020:CDS |
| TGAATTGTTGAAAGACTGTT+GGG | 0.532010 | 5_4:+16920108 | Msa0841020:CDS |
| GGAGAGTTCTAAACCAAAGA+GGG | 0.534171 | 5_4:+16919106 | Msa0841020:CDS |
| AAGAAGAGGATGAGACTTTG+GGG | 0.539663 | 5_4:+16918483 | Msa0841020:CDS |
| GGTGAAGGGAAAAGAAAAGG+AGG | 0.543855 | 5_4:+16919205 | Msa0841020:CDS |
| ACAAGTTACAGTGAGATGAA+TGG | 0.546780 | 5_4:+16919929 | Msa0841020:CDS |
| GTTTGACGAGGAGGAAGAAG+AGG | 0.548884 | 5_4:+16918469 | Msa0841020:CDS |
| ATTAGAGGTTATGGCAGTTG+CGG | 0.551620 | 5_4:+16919484 | Msa0841020:CDS |
| ATTAGAAGGTATGGTGATTG+CGG | 0.555974 | 5_4:+16919310 | Msa0841020:CDS |
| CAAGTTTGGGCTGTGTATGA+TGG | 0.556152 | 5_4:+16919563 | Msa0841020:CDS |
| ATTGGTGGCATAGATAATTG+AGG | 0.557425 | 5_4:+16920169 | Msa0841020:CDS |
| TGCGGTTAGATTTCTTGGGA+AGG | 0.560078 | 5_4:+16920024 | Msa0841020:CDS |
| AAAATGGAGAAGAAGCTTGA+GGG | 0.560242 | 5_4:+16919230 | Msa0841020:CDS |
| GAAAATGGAGAAGAAGCTTG+AGG | 0.563044 | 5_4:+16919229 | Msa0841020:CDS |
| AAATCTGAAGGAAGTGAAGC+CGG | 0.563049 | 5_4:-16920139 | None:intergenic |
| GTTGAGACCTGAGAGGCGTA+TGG | 0.565252 | 5_4:+16919445 | Msa0841020:CDS |
| TTTAAGGGTGATGATGAAGT+GGG | 0.572445 | 5_4:+16919035 | Msa0841020:CDS |
| GGCGAGTCTTGATGCAGGTG+AGG | 0.575765 | 5_4:+16919874 | Msa0841020:CDS |
| AATTCATGATCCTCGTCACA+AGG | 0.577413 | 5_4:-16920091 | None:intergenic |
| AGTTTGGGCGCTTTATAGTG+AGG | 0.578946 | 5_4:+16919853 | Msa0841020:CDS |
| TTTCATCAAGAGAAGGTGAA+GGG | 0.582372 | 5_4:+16919191 | Msa0841020:CDS |
| GAGGGTTGTTGGGAGTGAAG+AGG | 0.584510 | 5_4:+16919124 | Msa0841020:CDS |
| GTTGCCAAGAAGGCTTCCAT+AGG | 0.588409 | 5_4:+16919749 | Msa0841020:CDS |
| GATTTCCATAACAATGGGGA+CGG | 0.588448 | 5_4:+16919671 | Msa0841020:CDS |
| GCGAGTCTTGATGCAGGTGA+GGG | 0.589912 | 5_4:+16919875 | Msa0841020:CDS |
| ATGATGAAGTGGGTATTGTT+GGG | 0.590619 | 5_4:+16919045 | Msa0841020:CDS |
| GTGTTTAAGAGACAAGAGAG+TGG | 0.591607 | 5_4:+16919995 | Msa0841020:CDS |
| GAAAGGCATGTGGATACTAG+TGG | 0.594151 | 5_4:+16919368 | Msa0841020:CDS |
| TTAGGGTTTAAAATACCTTG+TGG | 0.601833 | 5_4:+16919716 | Msa0841020:CDS |
| TCAATCAGAACATATTGCCT+CGG | 0.603224 | 5_4:-16919602 | None:intergenic |
| TGGAGAGTTCTAAACCAAAG+AGG | 0.603499 | 5_4:+16919105 | Msa0841020:CDS |
| TGTTTAAGAGACAAGAGAGT+GGG | 0.603598 | 5_4:+16919996 | Msa0841020:CDS |
| AGGGTTCTGTGAGGAGAAAG+GGG | 0.605636 | 5_4:+16919249 | Msa0841020:CDS |
| CCAATAGTAAGTAAATCTGA+AGG | 0.606962 | 5_4:-16920151 | None:intergenic |
| AAGAAGAAGATAAGACTTTG+GGG | 0.608408 | 5_4:+16918814 | Msa0841020:CDS |
| TTGATAAAGATAGAGTGGAG+AGG | 0.608995 | 5_4:+16919525 | Msa0841020:CDS |
| AGTGAGGCGAGTCTTGATGC+AGG | 0.612149 | 5_4:+16919869 | Msa0841020:CDS |
| AAGTATGGCGTATCTTGAGA+AGG | 0.617016 | 5_4:+16919955 | Msa0841020:CDS |
| TCACAAGGGAATTTCCGCGC+AGG | 0.625413 | 5_4:-16920076 | None:intergenic |
| AGAAGAGGATGAGACTTTGG+GGG | 0.625917 | 5_4:+16918484 | Msa0841020:CDS |
| GGAATAAGCTTGTTTGTCCG+GGG | 0.627132 | 5_4:+16918402 | Msa0841020:CDS |
| GGCACAGGGATACTAGTGGA+GGG | 0.629103 | 5_4:+16919285 | Msa0841020:CDS |
| AGGCACAGGGATACTAGTGG+AGG | 0.636046 | 5_4:+16919284 | Msa0841020:CDS |
| AGAGGAATTAGAGGTTATGG+CGG | 0.638194 | 5_4:+16919391 | Msa0841020:CDS |
| GAGAGGCGTATGGATACTAG+TGG | 0.644590 | 5_4:+16919455 | Msa0841020:CDS |
| GAAAAGGGTTGAGATCTGAA+AGG | 0.650017 | 5_4:+16919351 | Msa0841020:CDS |
| GCACAGGGATACTAGTGGAG+GGG | 0.650483 | 5_4:+16919286 | Msa0841020:CDS |
| GCGGAAATTCCCTTGTGACG+AGG | 0.654390 | 5_4:+16920081 | Msa0841020:CDS |
| ATTGAGGAAGAGAACGCGGT+CGG | 0.656084 | 5_4:+16919070 | Msa0841020:CDS |
| GCATGTGGATACTAGTGGAG+AGG | 0.657075 | 5_4:+16919373 | Msa0841020:CDS |
| GTTGAGATCTGAAAGGCATG+TGG | 0.658135 | 5_4:+16919358 | Msa0841020:CDS |
| AGAAGCTTGAGGGTTCTGTG+AGG | 0.659031 | 5_4:+16919240 | Msa0841020:CDS |
| ACAAGAGAGTGGGAGTCATG+CGG | 0.661866 | 5_4:+16920006 | Msa0841020:CDS |
| AGAAGAAGATAAGACTTTGG+GGG | 0.663689 | 5_4:+16918815 | Msa0841020:CDS |
| GCGTATGGATACTAGTGGAG+AGG | 0.664701 | 5_4:+16919460 | Msa0841020:CDS |
| TTAAAACTCTTATTACACCC+CGG | 0.673794 | 5_4:-16918419 | None:intergenic |
| ATTCATGATCCTCGTCACAA+GGG | 0.675160 | 5_4:-16920090 | None:intergenic |
| GCAACTTTAAATCTCCCACA+AGG | 0.680984 | 5_4:-16919731 | None:intergenic |
| GATAGGCACAGGGATACTAG+TGG | 0.696687 | 5_4:+16919281 | Msa0841020:CDS |
| GTTGGATTTCCATAACAATG+GGG | 0.699788 | 5_4:+16919667 | Msa0841020:CDS |
| GTTGAGACTTGATAGGCACA+GGG | 0.704518 | 5_4:+16919271 | Msa0841020:CDS |
| GAAAAGGGTTGAGACCTGAG+AGG | 0.718731 | 5_4:+16919438 | Msa0841020:CDS |
| GGAGATTGAGGAAGAGAACG+CGG | 0.743265 | 5_4:+16919066 | Msa0841020:CDS |
| TATGAATGATGGGTTTGACG+AGG | 0.766151 | 5_4:+16918457 | Msa0841020:CDS |
| TTTCTCATCAGATTCCTGCG+CGG | 0.774610 | 5_4:+16920062 | Msa0841020:CDS |
| GTGATGATGATGGAATGCCG+AGG | 0.814192 | 5_4:+16919585 | Msa0841020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTGAGAGAAAATATTTA+GGG | + | chr5_4:16918381-16918400 | Msa0841020:CDS | 20.0% |
| !!! | TGAAAAAGATGAGATTTTTA+AGG | + | chr5_4:16918610-16918629 | Msa0841020:intron | 20.0% |
| !! | TACAAAATTTATCCTAAGAA+AGG | + | chr5_4:16919827-16919846 | Msa0841020:CDS | 20.0% |
| !! | AGTTTGAGAGAAAATATTTA+GGG | + | chr5_4:16918381-16918400 | Msa0841020:CDS | 20.0% |
| !!! | TGAAAAAGATGAGATTTTTA+AGG | + | chr5_4:16918610-16918629 | Msa0841020:intron | 20.0% |
| !! | TACAAAATTTATCCTAAGAA+AGG | + | chr5_4:16919827-16919846 | Msa0841020:CDS | 20.0% |
| ! | GAGTTTGAGAGAAAATATTT+AGG | + | chr5_4:16918380-16918399 | Msa0841020:CDS | 25.0% |
| ! | AAGAAAATGAGTTGTGAAAA+AGG | + | chr5_4:16918554-16918573 | Msa0841020:CDS | 25.0% |
| !!! | TGAAAAAGGTGTGATTTTTA+AGG | + | chr5_4:16918568-16918587 | Msa0841020:CDS | 25.0% |
| !!! | GAAAAAGGTGTGATTTTTAA+GGG | + | chr5_4:16918569-16918588 | Msa0841020:CDS | 25.0% |
| !!! | GATGAGATTTTTAAGGATAA+TGG | + | chr5_4:16918617-16918636 | Msa0841020:intron | 25.0% |
| !! | TGAAAAAGGTGACATTTTTA+AGG | + | chr5_4:16918893-16918912 | Msa0841020:CDS | 25.0% |
| !! | GAAAAAGGTGACATTTTTAA+GGG | + | chr5_4:16918894-16918913 | Msa0841020:CDS | 25.0% |
| !! | TGAAAAAGGTGAGATTTTTA+AGG | + | chr5_4:16918935-16918954 | Msa0841020:CDS | 25.0% |
| !! | GAAAAAGGTGAGATTTTTAA+GGG | + | chr5_4:16918936-16918955 | Msa0841020:CDS | 25.0% |
| !! | TGAAAAAGGTGAGAATTTTA+AGG | + | chr5_4:16919019-16919038 | Msa0841020:CDS | 25.0% |
| !! | GAAAAAGGTGAGAATTTTAA+GGG | + | chr5_4:16919020-16919039 | Msa0841020:CDS | 25.0% |
| !!! | TGATTTTGATAAAGATAGAG+TGG | + | chr5_4:16919520-16919539 | Msa0841020:CDS | 25.0% |
| !!! | TTTTAAGAAAGGTCAAGTTT+GGG | + | chr5_4:16919550-16919569 | Msa0841020:CDS | 25.0% |
| ! | ATAGTTAGTAGAGAGAAATT+AGG | + | chr5_4:16919698-16919717 | Msa0841020:CDS | 25.0% |
| ! | TAGTTAGTAGAGAGAAATTA+GGG | + | chr5_4:16919699-16919718 | Msa0841020:CDS | 25.0% |
| ! | GAGTTTGAGAGAAAATATTT+AGG | + | chr5_4:16918380-16918399 | Msa0841020:CDS | 25.0% |
| ! | AAGAAAATGAGTTGTGAAAA+AGG | + | chr5_4:16918554-16918573 | Msa0841020:CDS | 25.0% |
| !!! | TGAAAAAGGTGTGATTTTTA+AGG | + | chr5_4:16918568-16918587 | Msa0841020:CDS | 25.0% |
| !!! | GAAAAAGGTGTGATTTTTAA+GGG | + | chr5_4:16918569-16918588 | Msa0841020:CDS | 25.0% |
| !!! | GATGAGATTTTTAAGGATAA+TGG | + | chr5_4:16918617-16918636 | Msa0841020:intron | 25.0% |
| !! | TGAAAAAGGTGACATTTTTA+AGG | + | chr5_4:16918893-16918912 | Msa0841020:CDS | 25.0% |
| !! | GAAAAAGGTGACATTTTTAA+GGG | + | chr5_4:16918894-16918913 | Msa0841020:CDS | 25.0% |
| !! | TGAAAAAGGTGAGATTTTTA+AGG | + | chr5_4:16918935-16918954 | Msa0841020:CDS | 25.0% |
| !! | GAAAAAGGTGAGATTTTTAA+GGG | + | chr5_4:16918936-16918955 | Msa0841020:CDS | 25.0% |
| !! | TGAAAAAGGTGAGAATTTTA+AGG | + | chr5_4:16919019-16919038 | Msa0841020:CDS | 25.0% |
| !! | GAAAAAGGTGAGAATTTTAA+GGG | + | chr5_4:16919020-16919039 | Msa0841020:CDS | 25.0% |
| !!! | TGATTTTGATAAAGATAGAG+TGG | + | chr5_4:16919520-16919539 | Msa0841020:CDS | 25.0% |
| !!! | TTTTAAGAAAGGTCAAGTTT+GGG | + | chr5_4:16919550-16919569 | Msa0841020:CDS | 25.0% |
| ! | ATAGTTAGTAGAGAGAAATT+AGG | + | chr5_4:16919698-16919717 | Msa0841020:CDS | 25.0% |
| ! | TAGTTAGTAGAGAGAAATTA+GGG | + | chr5_4:16919699-16919718 | Msa0841020:CDS | 25.0% |
| TTAAAACTCTTATTACACCC+CGG | - | chr5_4:16918422-16918441 | None:intergenic | 30.0% | |
| TTGAAGCTGTTATGAATGAT+GGG | + | chr5_4:16918447-16918466 | Msa0841020:CDS | 30.0% | |
| ! | TGAAAAAGGGAAGAGTTTTA+AGG | + | chr5_4:16918752-16918771 | Msa0841020:intron | 30.0% |
| TGAAGAAGAAGATAAGACTT+TGG | + | chr5_4:16918812-16918831 | Msa0841020:CDS | 30.0% | |
| GAAGAAGAAGATAAGACTTT+GGG | + | chr5_4:16918813-16918832 | Msa0841020:CDS | 30.0% | |
| AAGAAGAAGATAAGACTTTG+GGG | + | chr5_4:16918814-16918833 | Msa0841020:CDS | 30.0% | |
| AACATGAAGAAGAAGATGAA+TGG | + | chr5_4:16918858-16918877 | Msa0841020:CDS | 30.0% | |
| ACATGAAGAAGAAGATGAAT+GGG | + | chr5_4:16918859-16918878 | Msa0841020:CDS | 30.0% | |
| AAGAAGATGAATGGGAAAAA+GGG | + | chr5_4:16918867-16918886 | Msa0841020:CDS | 30.0% | |
| !! | CTTTTTCACAAACCAATTCA+CGG | - | chr5_4:16918923-16918942 | None:intergenic | 30.0% |
| ! | TGAAAAGGGTGAGATTTTTA+AGG | + | chr5_4:16918977-16918996 | Msa0841020:CDS | 30.0% |
| ! | GAAAAGGGTGAGATTTTTAA+GGG | + | chr5_4:16918978-16918997 | Msa0841020:CDS | 30.0% |
| ! | GAGAAATTTTCATCAAGAGA+AGG | + | chr5_4:16919184-16919203 | Msa0841020:CDS | 30.0% |
| AAAAGAAAAGGAGGAGAAAA+TGG | + | chr5_4:16919214-16919233 | Msa0841020:CDS | 30.0% | |
| !!! | GTTTTAAGAAAGGTCAAGTT+TGG | + | chr5_4:16919549-16919568 | Msa0841020:CDS | 30.0% |
| CAACTTATCATCACGTTAAA+AGG | - | chr5_4:16919647-16919666 | None:intergenic | 30.0% | |
| ! | CTTTTAACGTGATGATAAGT+TGG | + | chr5_4:16919645-16919664 | Msa0841020:CDS | 30.0% |
| ! | TTAGGGTTTAAAATACCTTG+TGG | + | chr5_4:16919716-16919735 | Msa0841020:CDS | 30.0% |
| ! | TAGGGTTTAAAATACCTTGT+GGG | + | chr5_4:16919717-16919736 | Msa0841020:CDS | 30.0% |
| TGAGATGAATGGTATAAGTA+TGG | + | chr5_4:16919940-16919959 | Msa0841020:CDS | 30.0% | |
| ATGAATTGTTGAAAGACTGT+TGG | + | chr5_4:16920107-16920126 | Msa0841020:CDS | 30.0% | |
| TGAATTGTTGAAAGACTGTT+GGG | + | chr5_4:16920108-16920127 | Msa0841020:CDS | 30.0% | |
| CCAATAGTAAGTAAATCTGA+AGG | - | chr5_4:16920154-16920173 | None:intergenic | 30.0% | |
| CCTTCAGATTTACTTACTAT+TGG | + | chr5_4:16920151-16920170 | Msa0841020:CDS | 30.0% | |
| TCAGATTTACTTACTATTGG+TGG | + | chr5_4:16920154-16920173 | Msa0841020:CDS | 30.0% | |
| TTAAAACTCTTATTACACCC+CGG | - | chr5_4:16918422-16918441 | None:intergenic | 30.0% | |
| TTGAAGCTGTTATGAATGAT+GGG | + | chr5_4:16918447-16918466 | Msa0841020:CDS | 30.0% | |
| ! | TGAAAAAGGGAAGAGTTTTA+AGG | + | chr5_4:16918752-16918771 | Msa0841020:intron | 30.0% |
| TGAAGAAGAAGATAAGACTT+TGG | + | chr5_4:16918812-16918831 | Msa0841020:CDS | 30.0% | |
| GAAGAAGAAGATAAGACTTT+GGG | + | chr5_4:16918813-16918832 | Msa0841020:CDS | 30.0% | |
| AAGAAGAAGATAAGACTTTG+GGG | + | chr5_4:16918814-16918833 | Msa0841020:CDS | 30.0% | |
| AACATGAAGAAGAAGATGAA+TGG | + | chr5_4:16918858-16918877 | Msa0841020:CDS | 30.0% | |
| ACATGAAGAAGAAGATGAAT+GGG | + | chr5_4:16918859-16918878 | Msa0841020:CDS | 30.0% | |
| AAGAAGATGAATGGGAAAAA+GGG | + | chr5_4:16918867-16918886 | Msa0841020:CDS | 30.0% | |
| !! | CTTTTTCACAAACCAATTCA+CGG | - | chr5_4:16918923-16918942 | None:intergenic | 30.0% |
| ! | TGAAAAGGGTGAGATTTTTA+AGG | + | chr5_4:16918977-16918996 | Msa0841020:CDS | 30.0% |
| ! | GAAAAGGGTGAGATTTTTAA+GGG | + | chr5_4:16918978-16918997 | Msa0841020:CDS | 30.0% |
| ! | GAGAAATTTTCATCAAGAGA+AGG | + | chr5_4:16919184-16919203 | Msa0841020:CDS | 30.0% |
| AAAAGAAAAGGAGGAGAAAA+TGG | + | chr5_4:16919214-16919233 | Msa0841020:CDS | 30.0% | |
| !!! | GTTTTAAGAAAGGTCAAGTT+TGG | + | chr5_4:16919549-16919568 | Msa0841020:CDS | 30.0% |
| CAACTTATCATCACGTTAAA+AGG | - | chr5_4:16919647-16919666 | None:intergenic | 30.0% | |
| ! | CTTTTAACGTGATGATAAGT+TGG | + | chr5_4:16919645-16919664 | Msa0841020:CDS | 30.0% |
| ! | TTAGGGTTTAAAATACCTTG+TGG | + | chr5_4:16919716-16919735 | Msa0841020:CDS | 30.0% |
| ! | TAGGGTTTAAAATACCTTGT+GGG | + | chr5_4:16919717-16919736 | Msa0841020:CDS | 30.0% |
| TGAGATGAATGGTATAAGTA+TGG | + | chr5_4:16919940-16919959 | Msa0841020:CDS | 30.0% | |
| ATGAATTGTTGAAAGACTGT+TGG | + | chr5_4:16920107-16920126 | Msa0841020:CDS | 30.0% | |
| TGAATTGTTGAAAGACTGTT+GGG | + | chr5_4:16920108-16920127 | Msa0841020:CDS | 30.0% | |
| CCAATAGTAAGTAAATCTGA+AGG | - | chr5_4:16920154-16920173 | None:intergenic | 30.0% | |
| CCTTCAGATTTACTTACTAT+TGG | + | chr5_4:16920151-16920170 | Msa0841020:CDS | 30.0% | |
| TCAGATTTACTTACTATTGG+TGG | + | chr5_4:16920154-16920173 | Msa0841020:CDS | 30.0% | |
| ! | GGGGTGTAATAAGAGTTTTA+AGG | + | chr5_4:16918421-16918440 | Msa0841020:CDS | 35.0% |
| GTTGAAGCTGTTATGAATGA+TGG | + | chr5_4:16918446-16918465 | Msa0841020:CDS | 35.0% | |
| !! | NNNGAAGTGGGTTGTGAAAA+AGG | + | chr5_4:16918738-16918757 | Msa0841020:intron | 35.0% |
| !! | NNGAAGTGGGTTGTGAAAAA+GGG | + | chr5_4:16918739-16918758 | Msa0841020:intron | 35.0% |
| !!! | CTGAAGCAGTTTTGATTGAT+GGG | + | chr5_4:16918778-16918797 | Msa0841020:CDS | 35.0% |
| AGAAGAAGATAAGACTTTGG+GGG | + | chr5_4:16918815-16918834 | Msa0841020:CDS | 35.0% | |
| GAAGAAGATGAATGGGAAAA+AGG | + | chr5_4:16918866-16918885 | Msa0841020:CDS | 35.0% | |
| AGAAGATGAATGGGAAAAAG+GGG | + | chr5_4:16918868-16918887 | Msa0841020:CDS | 35.0% | |
| !! | CGTGAATTGGTTTGTGAAAA+AGG | + | chr5_4:16918921-16918940 | Msa0841020:CDS | 35.0% |
| !! | GGTGAGATTTTTAAGGGTAA+TGG | + | chr5_4:16918942-16918961 | Msa0841020:CDS | 35.0% |
| !! | TTTTAAGGGTAATGGTGAAG+TGG | + | chr5_4:16918950-16918969 | Msa0841020:CDS | 35.0% |
| ! | TTTAAGGGTAATGGTGAAGT+GGG | + | chr5_4:16918951-16918970 | Msa0841020:CDS | 35.0% |
| !! | GGTGAGATTTTTAAGGGTAA+TGG | + | chr5_4:16918942-16918961 | Msa0841020:CDS | 35.0% |
| !! | TTTTAAGGGTAATGGTGAAG+TGG | + | chr5_4:16918950-16918969 | Msa0841020:CDS | 35.0% |
| ! | TTTAAGGGTAATGGTGAAGT+GGG | + | chr5_4:16918951-16918970 | Msa0841020:CDS | 35.0% |
| !! | TTTTAAGGGTGATGATGAAG+TGG | + | chr5_4:16919034-16919053 | Msa0841020:CDS | 35.0% |
| ! | TTTAAGGGTGATGATGAAGT+GGG | + | chr5_4:16919035-16919054 | Msa0841020:CDS | 35.0% |
| ! | ATGATGAAGTGGGTATTGTT+GGG | + | chr5_4:16919045-16919064 | Msa0841020:CDS | 35.0% |
| ! | TTTTCATCAAGAGAAGGTGA+AGG | + | chr5_4:16919190-16919209 | Msa0841020:CDS | 35.0% |
| TTTCATCAAGAGAAGGTGAA+GGG | + | chr5_4:16919191-16919210 | Msa0841020:CDS | 35.0% | |
| AAAATGGAGAAGAAGCTTGA+GGG | + | chr5_4:16919230-16919249 | Msa0841020:CDS | 35.0% | |
| ! | ATTAGAAGGTATGGTGATTG+CGG | + | chr5_4:16919310-16919329 | Msa0841020:CDS | 35.0% |
| TTGGATTCTGTGAAGAGAAA+AGG | + | chr5_4:16919335-16919354 | Msa0841020:CDS | 35.0% | |
| TGGATTCTGTGAAGAGAAAA+GGG | + | chr5_4:16919336-16919355 | Msa0841020:CDS | 35.0% | |
| TTCGATACTGTGAAGAGAAA+AGG | + | chr5_4:16919422-16919441 | Msa0841020:CDS | 35.0% | |
| TCGATACTGTGAAGAGAAAA+GGG | + | chr5_4:16919423-16919442 | Msa0841020:CDS | 35.0% | |
| TTGATAAAGATAGAGTGGAG+AGG | + | chr5_4:16919525-16919544 | Msa0841020:CDS | 35.0% | |
| TCAATCAGAACATATTGCCT+CGG | - | chr5_4:16919605-16919624 | None:intergenic | 35.0% | |
| !! | TAACGTGATGATAAGTTGGT+TGG | + | chr5_4:16919649-16919668 | Msa0841020:CDS | 35.0% |
| TGGTTGGATTTCCATAACAA+TGG | + | chr5_4:16919665-16919684 | Msa0841020:CDS | 35.0% | |
| GGTTGGATTTCCATAACAAT+GGG | + | chr5_4:16919666-16919685 | Msa0841020:CDS | 35.0% | |
| GTTGGATTTCCATAACAATG+GGG | + | chr5_4:16919667-16919686 | Msa0841020:CDS | 35.0% | |
| ! | GAGATTTAAAGTTGCCAAGA+AGG | + | chr5_4:16919739-16919758 | Msa0841020:CDS | 35.0% |
| ATCCTAAGAAAGGTTCAGTT+TGG | + | chr5_4:16919837-16919856 | Msa0841020:CDS | 35.0% | |
| TCCTAAGAAAGGTTCAGTTT+GGG | + | chr5_4:16919838-16919857 | Msa0841020:CDS | 35.0% | |
| ACAAGTTACAGTGAGATGAA+TGG | + | chr5_4:16919929-16919948 | Msa0841020:CDS | 35.0% | |
| TGTTTAAGAGACAAGAGAGT+GGG | + | chr5_4:16919996-16920015 | Msa0841020:CDS | 35.0% | |
| ! | GGGGTGTAATAAGAGTTTTA+AGG | + | chr5_4:16918421-16918440 | Msa0841020:CDS | 35.0% |
| GTTGAAGCTGTTATGAATGA+TGG | + | chr5_4:16918446-16918465 | Msa0841020:CDS | 35.0% | |
| !! | NNNGAAGTGGGTTGTGAAAA+AGG | + | chr5_4:16918738-16918757 | Msa0841020:intron | 35.0% |
| !! | NNGAAGTGGGTTGTGAAAAA+GGG | + | chr5_4:16918739-16918758 | Msa0841020:intron | 35.0% |
| !!! | CTGAAGCAGTTTTGATTGAT+GGG | + | chr5_4:16918778-16918797 | Msa0841020:CDS | 35.0% |
| AGAAGAAGATAAGACTTTGG+GGG | + | chr5_4:16918815-16918834 | Msa0841020:CDS | 35.0% | |
| GAAGAAGATGAATGGGAAAA+AGG | + | chr5_4:16918866-16918885 | Msa0841020:CDS | 35.0% | |
| AGAAGATGAATGGGAAAAAG+GGG | + | chr5_4:16918868-16918887 | Msa0841020:CDS | 35.0% | |
| !! | CGTGAATTGGTTTGTGAAAA+AGG | + | chr5_4:16918921-16918940 | Msa0841020:CDS | 35.0% |
| !! | GGTGAGATTTTTAAGGGTAA+TGG | + | chr5_4:16918942-16918961 | Msa0841020:CDS | 35.0% |
| !! | TTTTAAGGGTAATGGTGAAG+TGG | + | chr5_4:16918950-16918969 | Msa0841020:CDS | 35.0% |
| ! | TTTAAGGGTAATGGTGAAGT+GGG | + | chr5_4:16918951-16918970 | Msa0841020:CDS | 35.0% |
| !! | GGTGAGATTTTTAAGGGTAA+TGG | + | chr5_4:16918942-16918961 | Msa0841020:CDS | 35.0% |
| !! | TTTTAAGGGTAATGGTGAAG+TGG | + | chr5_4:16918950-16918969 | Msa0841020:CDS | 35.0% |
| ! | TTTAAGGGTAATGGTGAAGT+GGG | + | chr5_4:16918951-16918970 | Msa0841020:CDS | 35.0% |
| !! | TTTTAAGGGTGATGATGAAG+TGG | + | chr5_4:16919034-16919053 | Msa0841020:CDS | 35.0% |
| ! | TTTAAGGGTGATGATGAAGT+GGG | + | chr5_4:16919035-16919054 | Msa0841020:CDS | 35.0% |
| ! | ATGATGAAGTGGGTATTGTT+GGG | + | chr5_4:16919045-16919064 | Msa0841020:CDS | 35.0% |
| ! | TTTTCATCAAGAGAAGGTGA+AGG | + | chr5_4:16919190-16919209 | Msa0841020:CDS | 35.0% |
| TTTCATCAAGAGAAGGTGAA+GGG | + | chr5_4:16919191-16919210 | Msa0841020:CDS | 35.0% | |
| AAAATGGAGAAGAAGCTTGA+GGG | + | chr5_4:16919230-16919249 | Msa0841020:CDS | 35.0% | |
| ! | ATTAGAAGGTATGGTGATTG+CGG | + | chr5_4:16919310-16919329 | Msa0841020:CDS | 35.0% |
| TTGGATTCTGTGAAGAGAAA+AGG | + | chr5_4:16919335-16919354 | Msa0841020:CDS | 35.0% | |
| TGGATTCTGTGAAGAGAAAA+GGG | + | chr5_4:16919336-16919355 | Msa0841020:CDS | 35.0% | |
| TTCGATACTGTGAAGAGAAA+AGG | + | chr5_4:16919422-16919441 | Msa0841020:CDS | 35.0% | |
| TCGATACTGTGAAGAGAAAA+GGG | + | chr5_4:16919423-16919442 | Msa0841020:CDS | 35.0% | |
| TTGATAAAGATAGAGTGGAG+AGG | + | chr5_4:16919525-16919544 | Msa0841020:CDS | 35.0% | |
| TCAATCAGAACATATTGCCT+CGG | - | chr5_4:16919605-16919624 | None:intergenic | 35.0% | |
| !! | TAACGTGATGATAAGTTGGT+TGG | + | chr5_4:16919649-16919668 | Msa0841020:CDS | 35.0% |
| TGGTTGGATTTCCATAACAA+TGG | + | chr5_4:16919665-16919684 | Msa0841020:CDS | 35.0% | |
| GGTTGGATTTCCATAACAAT+GGG | + | chr5_4:16919666-16919685 | Msa0841020:CDS | 35.0% | |
| GTTGGATTTCCATAACAATG+GGG | + | chr5_4:16919667-16919686 | Msa0841020:CDS | 35.0% | |
| ! | GAGATTTAAAGTTGCCAAGA+AGG | + | chr5_4:16919739-16919758 | Msa0841020:CDS | 35.0% |
| ATCCTAAGAAAGGTTCAGTT+TGG | + | chr5_4:16919837-16919856 | Msa0841020:CDS | 35.0% | |
| TCCTAAGAAAGGTTCAGTTT+GGG | + | chr5_4:16919838-16919857 | Msa0841020:CDS | 35.0% | |
| ACAAGTTACAGTGAGATGAA+TGG | + | chr5_4:16919929-16919948 | Msa0841020:CDS | 35.0% | |
| TGTTTAAGAGACAAGAGAGT+GGG | + | chr5_4:16919996-16920015 | Msa0841020:CDS | 35.0% | |
| ! | AGGGAATAAGCTTGTTTGTC+CGG | + | chr5_4:16918400-16918419 | Msa0841020:CDS | 40.0% |
| !! | TATGAATGATGGGTTTGACG+AGG | + | chr5_4:16918457-16918476 | Msa0841020:CDS | 40.0% |
| GAAGAAGAGGATGAGACTTT+GGG | + | chr5_4:16918482-16918501 | Msa0841020:CDS | 40.0% | |
| AAGAAGAGGATGAGACTTTG+GGG | + | chr5_4:16918483-16918502 | Msa0841020:CDS | 40.0% | |
| !! | TTTTAAGGGTGACGATGAAG+TGG | + | chr5_4:16918583-16918602 | Msa0841020:CDS | 40.0% |
| TTTAAGGGTGACGATGAAGT+GGG | + | chr5_4:16918584-16918603 | Msa0841020:CDS | 40.0% | |
| !!! | GCTGAAGCAGTTTTGATTGA+TGG | + | chr5_4:16918777-16918796 | Msa0841020:CDS | 40.0% |
| !!! | AGTTTTGATTGATGGGTCTG+AGG | + | chr5_4:16918785-16918804 | Msa0841020:CDS | 40.0% |
| !! | TTTTAAGGGTGACCGTGAAT+TGG | + | chr5_4:16918908-16918927 | Msa0841020:CDS | 40.0% |
| ! | GATGATGAAGTGGGTATTGT+TGG | + | chr5_4:16919044-16919063 | Msa0841020:CDS | 40.0% |
| !! | TGGAGAGTTCTAAACCAAAG+AGG | + | chr5_4:16919105-16919124 | Msa0841020:CDS | 40.0% |
| !! | GGAGAGTTCTAAACCAAAGA+GGG | + | chr5_4:16919106-16919125 | Msa0841020:CDS | 40.0% |
| TCTAAACCAAAGAGGGTTGT+TGG | + | chr5_4:16919113-16919132 | Msa0841020:CDS | 40.0% | |
| CTAAACCAAAGAGGGTTGTT+GGG | + | chr5_4:16919114-16919133 | Msa0841020:CDS | 40.0% | |
| GAAGGTGAAGGGAAAAGAAA+AGG | + | chr5_4:16919202-16919221 | Msa0841020:CDS | 40.0% | |
| GAAAATGGAGAAGAAGCTTG+AGG | + | chr5_4:16919229-16919248 | Msa0841020:CDS | 40.0% | |
| GAAAAGGGTTGAGATCTGAA+AGG | + | chr5_4:16919351-16919370 | Msa0841020:CDS | 40.0% | |
| TACTAGTGGAGAGGAATTAG+AGG | + | chr5_4:16919382-16919401 | Msa0841020:CDS | 40.0% | |
| TGGAGAGGAATTAGAGGTTA+TGG | + | chr5_4:16919388-16919407 | Msa0841020:CDS | 40.0% | |
| AGAGGAATTAGAGGTTATGG+CGG | + | chr5_4:16919391-16919410 | Msa0841020:CDS | 40.0% | |
| TACTAGTGGAGAGGAATTAG+AGG | + | chr5_4:16919382-16919401 | Msa0841020:CDS | 40.0% | |
| TGGAGAGGAATTAGAGGTTA+TGG | + | chr5_4:16919388-16919407 | Msa0841020:CDS | 40.0% | |
| ATTAGAGGTTATGGCAGTTG+CGG | + | chr5_4:16919484-16919503 | Msa0841020:CDS | 40.0% | |
| !!! | GTGGAGAGGAGTTTTAAGAA+AGG | + | chr5_4:16919539-16919558 | Msa0841020:CDS | 40.0% |
| ! | GTGTATGATGGTGATGATGA+TGG | + | chr5_4:16919575-16919594 | Msa0841020:CDS | 40.0% |
| GATTTCCATAACAATGGGGA+CGG | + | chr5_4:16919671-16919690 | Msa0841020:CDS | 40.0% | |
| GCAACTTTAAATCTCCCACA+AGG | - | chr5_4:16919734-16919753 | None:intergenic | 40.0% | |
| GAAGACATTTACCGAACCTA+TGG | - | chr5_4:16919768-16919787 | None:intergenic | 40.0% | |
| ! | CTCATGTTGTCGATTGTGAT+CGG | + | chr5_4:16919789-16919808 | Msa0841020:CDS | 40.0% |
| ! | TCATGTTGTCGATTGTGATC+GGG | + | chr5_4:16919790-16919809 | Msa0841020:CDS | 40.0% |
| AAGTATGGCGTATCTTGAGA+AGG | + | chr5_4:16919955-16919974 | Msa0841020:CDS | 40.0% | |
| GTGTTTAAGAGACAAGAGAG+TGG | + | chr5_4:16919995-16920014 | Msa0841020:CDS | 40.0% | |
| AGTCATGCGGTTAGATTTCT+TGG | + | chr5_4:16920019-16920038 | Msa0841020:CDS | 40.0% | |
| GTCATGCGGTTAGATTTCTT+GGG | + | chr5_4:16920020-16920039 | Msa0841020:CDS | 40.0% | |
| ATTCATGATCCTCGTCACAA+GGG | - | chr5_4:16920093-16920112 | None:intergenic | 40.0% | |
| AATTCATGATCCTCGTCACA+AGG | - | chr5_4:16920094-16920113 | None:intergenic | 40.0% | |
| AAATCTGAAGGAAGTGAAGC+CGG | - | chr5_4:16920142-16920161 | None:intergenic | 40.0% | |
| ! | AGGGAATAAGCTTGTTTGTC+CGG | + | chr5_4:16918400-16918419 | Msa0841020:CDS | 40.0% |
| !! | TATGAATGATGGGTTTGACG+AGG | + | chr5_4:16918457-16918476 | Msa0841020:CDS | 40.0% |
| GAAGAAGAGGATGAGACTTT+GGG | + | chr5_4:16918482-16918501 | Msa0841020:CDS | 40.0% | |
| AAGAAGAGGATGAGACTTTG+GGG | + | chr5_4:16918483-16918502 | Msa0841020:CDS | 40.0% | |
| !! | TTTTAAGGGTGACGATGAAG+TGG | + | chr5_4:16918583-16918602 | Msa0841020:CDS | 40.0% |
| TTTAAGGGTGACGATGAAGT+GGG | + | chr5_4:16918584-16918603 | Msa0841020:CDS | 40.0% | |
| !!! | GCTGAAGCAGTTTTGATTGA+TGG | + | chr5_4:16918777-16918796 | Msa0841020:CDS | 40.0% |
| !!! | AGTTTTGATTGATGGGTCTG+AGG | + | chr5_4:16918785-16918804 | Msa0841020:CDS | 40.0% |
| !! | TTTTAAGGGTGACCGTGAAT+TGG | + | chr5_4:16918908-16918927 | Msa0841020:CDS | 40.0% |
| ! | GATGATGAAGTGGGTATTGT+TGG | + | chr5_4:16919044-16919063 | Msa0841020:CDS | 40.0% |
| !! | TGGAGAGTTCTAAACCAAAG+AGG | + | chr5_4:16919105-16919124 | Msa0841020:CDS | 40.0% |
| !! | GGAGAGTTCTAAACCAAAGA+GGG | + | chr5_4:16919106-16919125 | Msa0841020:CDS | 40.0% |
| TCTAAACCAAAGAGGGTTGT+TGG | + | chr5_4:16919113-16919132 | Msa0841020:CDS | 40.0% | |
| CTAAACCAAAGAGGGTTGTT+GGG | + | chr5_4:16919114-16919133 | Msa0841020:CDS | 40.0% | |
| GAAGGTGAAGGGAAAAGAAA+AGG | + | chr5_4:16919202-16919221 | Msa0841020:CDS | 40.0% | |
| GAAAATGGAGAAGAAGCTTG+AGG | + | chr5_4:16919229-16919248 | Msa0841020:CDS | 40.0% | |
| GAAAAGGGTTGAGATCTGAA+AGG | + | chr5_4:16919351-16919370 | Msa0841020:CDS | 40.0% | |
| TACTAGTGGAGAGGAATTAG+AGG | + | chr5_4:16919382-16919401 | Msa0841020:CDS | 40.0% | |
| TGGAGAGGAATTAGAGGTTA+TGG | + | chr5_4:16919388-16919407 | Msa0841020:CDS | 40.0% | |
| AGAGGAATTAGAGGTTATGG+CGG | + | chr5_4:16919391-16919410 | Msa0841020:CDS | 40.0% | |
| TACTAGTGGAGAGGAATTAG+AGG | + | chr5_4:16919382-16919401 | Msa0841020:CDS | 40.0% | |
| TGGAGAGGAATTAGAGGTTA+TGG | + | chr5_4:16919388-16919407 | Msa0841020:CDS | 40.0% | |
| ATTAGAGGTTATGGCAGTTG+CGG | + | chr5_4:16919484-16919503 | Msa0841020:CDS | 40.0% | |
| !!! | GTGGAGAGGAGTTTTAAGAA+AGG | + | chr5_4:16919539-16919558 | Msa0841020:CDS | 40.0% |
| ! | GTGTATGATGGTGATGATGA+TGG | + | chr5_4:16919575-16919594 | Msa0841020:CDS | 40.0% |
| GATTTCCATAACAATGGGGA+CGG | + | chr5_4:16919671-16919690 | Msa0841020:CDS | 40.0% | |
| GCAACTTTAAATCTCCCACA+AGG | - | chr5_4:16919734-16919753 | None:intergenic | 40.0% | |
| GAAGACATTTACCGAACCTA+TGG | - | chr5_4:16919768-16919787 | None:intergenic | 40.0% | |
| ! | CTCATGTTGTCGATTGTGAT+CGG | + | chr5_4:16919789-16919808 | Msa0841020:CDS | 40.0% |
| ! | TCATGTTGTCGATTGTGATC+GGG | + | chr5_4:16919790-16919809 | Msa0841020:CDS | 40.0% |
| AAGTATGGCGTATCTTGAGA+AGG | + | chr5_4:16919955-16919974 | Msa0841020:CDS | 40.0% | |
| GTGTTTAAGAGACAAGAGAG+TGG | + | chr5_4:16919995-16920014 | Msa0841020:CDS | 40.0% | |
| AGTCATGCGGTTAGATTTCT+TGG | + | chr5_4:16920019-16920038 | Msa0841020:CDS | 40.0% | |
| GTCATGCGGTTAGATTTCTT+GGG | + | chr5_4:16920020-16920039 | Msa0841020:CDS | 40.0% | |
| ATTCATGATCCTCGTCACAA+GGG | - | chr5_4:16920093-16920112 | None:intergenic | 40.0% | |
| AATTCATGATCCTCGTCACA+AGG | - | chr5_4:16920094-16920113 | None:intergenic | 40.0% | |
| AAATCTGAAGGAAGTGAAGC+CGG | - | chr5_4:16920142-16920161 | None:intergenic | 40.0% | |
| ! | GGGAATAAGCTTGTTTGTCC+GGG | + | chr5_4:16918401-16918420 | Msa0841020:CDS | 45.0% |
| ! | GGAATAAGCTTGTTTGTCCG+GGG | + | chr5_4:16918402-16918421 | Msa0841020:CDS | 45.0% |
| GGAAGAAGAGGATGAGACTT+TGG | + | chr5_4:16918481-16918500 | Msa0841020:CDS | 45.0% | |
| AGAAGAGGATGAGACTTTGG+GGG | + | chr5_4:16918484-16918503 | Msa0841020:CDS | 45.0% | |
| ! | GGGAAAAAGGGGTGTGAAAA+AGG | + | chr5_4:16918879-16918898 | Msa0841020:CDS | 45.0% |
| !! | TGGTGAAGTGGGTTGTGAAA+AGG | + | chr5_4:16918962-16918981 | Msa0841020:CDS | 45.0% |
| !! | GGTGAAGTGGGTTGTGAAAA+GGG | + | chr5_4:16918963-16918982 | Msa0841020:CDS | 45.0% |
| !! | GGTGAAGTGGGTTGTGAAAA+AGG | + | chr5_4:16918963-16918982 | Msa0841020:CDS | 45.0% |
| ! | TGGGTATTGTTGGGAGATTG+AGG | + | chr5_4:16919054-16919073 | Msa0841020:CDS | 45.0% |
| GGTGAAGGGAAAAGAAAAGG+AGG | + | chr5_4:16919205-16919224 | Msa0841020:CDS | 45.0% | |
| GAAAGGGGTTGAGACTTGAT+AGG | + | chr5_4:16919264-16919283 | Msa0841020:CDS | 45.0% | |
| GTTGAGACTTGATAGGCACA+GGG | + | chr5_4:16919271-16919290 | Msa0841020:CDS | 45.0% | |
| ACTAGTGGAGGGGAATTAGA+AGG | + | chr5_4:16919296-16919315 | Msa0841020:CDS | 45.0% | |
| TGGAGGGGAATTAGAAGGTA+TGG | + | chr5_4:16919301-16919320 | Msa0841020:CDS | 45.0% | |
| AGGTATGGTGATTGCGGATT+TGG | + | chr5_4:16919316-16919335 | Msa0841020:CDS | 45.0% | |
| ! | GTTGAGATCTGAAAGGCATG+TGG | + | chr5_4:16919358-16919377 | Msa0841020:CDS | 45.0% |
| ! | GAAAGGCATGTGGATACTAG+TGG | + | chr5_4:16919368-16919387 | Msa0841020:CDS | 45.0% |
| ATTAGAGGTTATGGCGGTTG+CGG | + | chr5_4:16919397-16919416 | Msa0841020:CDS | 45.0% | |
| CAAGTTTGGGCTGTGTATGA+TGG | + | chr5_4:16919563-16919582 | Msa0841020:CDS | 45.0% | |
| TCTTTCCGTCCCCATTGTTA+TGG | - | chr5_4:16919679-16919698 | None:intergenic | 45.0% | |
| CAAGAAGGCTTCCATAGGTT+CGG | + | chr5_4:16919754-16919773 | Msa0841020:CDS | 45.0% | |
| GCCCAAACTGAACCTTTCTT+AGG | - | chr5_4:16919842-16919861 | None:intergenic | 45.0% | |
| AGTTTGGGCGCTTTATAGTG+AGG | + | chr5_4:16919853-16919872 | Msa0841020:CDS | 45.0% | |
| GCGTATCTTGAGAAGGTTGA+TGG | + | chr5_4:16919962-16919981 | Msa0841020:CDS | 45.0% | |
| TGCGGTTAGATTTCTTGGGA+AGG | + | chr5_4:16920024-16920043 | Msa0841020:CDS | 45.0% | |
| TTTCTCATCAGATTCCTGCG+CGG | + | chr5_4:16920062-16920081 | Msa0841020:CDS | 45.0% | |
| ! | GGGAATAAGCTTGTTTGTCC+GGG | + | chr5_4:16918401-16918420 | Msa0841020:CDS | 45.0% |
| ! | GGAATAAGCTTGTTTGTCCG+GGG | + | chr5_4:16918402-16918421 | Msa0841020:CDS | 45.0% |
| GGAAGAAGAGGATGAGACTT+TGG | + | chr5_4:16918481-16918500 | Msa0841020:CDS | 45.0% | |
| AGAAGAGGATGAGACTTTGG+GGG | + | chr5_4:16918484-16918503 | Msa0841020:CDS | 45.0% | |
| ! | GGGAAAAAGGGGTGTGAAAA+AGG | + | chr5_4:16918879-16918898 | Msa0841020:CDS | 45.0% |
| !! | TGGTGAAGTGGGTTGTGAAA+AGG | + | chr5_4:16918962-16918981 | Msa0841020:CDS | 45.0% |
| !! | GGTGAAGTGGGTTGTGAAAA+GGG | + | chr5_4:16918963-16918982 | Msa0841020:CDS | 45.0% |
| !! | GGTGAAGTGGGTTGTGAAAA+AGG | + | chr5_4:16918963-16918982 | Msa0841020:CDS | 45.0% |
| ! | TGGGTATTGTTGGGAGATTG+AGG | + | chr5_4:16919054-16919073 | Msa0841020:CDS | 45.0% |
| GGTGAAGGGAAAAGAAAAGG+AGG | + | chr5_4:16919205-16919224 | Msa0841020:CDS | 45.0% | |
| GAAAGGGGTTGAGACTTGAT+AGG | + | chr5_4:16919264-16919283 | Msa0841020:CDS | 45.0% | |
| GTTGAGACTTGATAGGCACA+GGG | + | chr5_4:16919271-16919290 | Msa0841020:CDS | 45.0% | |
| ACTAGTGGAGGGGAATTAGA+AGG | + | chr5_4:16919296-16919315 | Msa0841020:CDS | 45.0% | |
| TGGAGGGGAATTAGAAGGTA+TGG | + | chr5_4:16919301-16919320 | Msa0841020:CDS | 45.0% | |
| AGGTATGGTGATTGCGGATT+TGG | + | chr5_4:16919316-16919335 | Msa0841020:CDS | 45.0% | |
| ! | GTTGAGATCTGAAAGGCATG+TGG | + | chr5_4:16919358-16919377 | Msa0841020:CDS | 45.0% |
| ! | GAAAGGCATGTGGATACTAG+TGG | + | chr5_4:16919368-16919387 | Msa0841020:CDS | 45.0% |
| ATTAGAGGTTATGGCGGTTG+CGG | + | chr5_4:16919397-16919416 | Msa0841020:CDS | 45.0% | |
| CAAGTTTGGGCTGTGTATGA+TGG | + | chr5_4:16919563-16919582 | Msa0841020:CDS | 45.0% | |
| TCTTTCCGTCCCCATTGTTA+TGG | - | chr5_4:16919679-16919698 | None:intergenic | 45.0% | |
| CAAGAAGGCTTCCATAGGTT+CGG | + | chr5_4:16919754-16919773 | Msa0841020:CDS | 45.0% | |
| GCCCAAACTGAACCTTTCTT+AGG | - | chr5_4:16919842-16919861 | None:intergenic | 45.0% | |
| AGTTTGGGCGCTTTATAGTG+AGG | + | chr5_4:16919853-16919872 | Msa0841020:CDS | 45.0% | |
| GCGTATCTTGAGAAGGTTGA+TGG | + | chr5_4:16919962-16919981 | Msa0841020:CDS | 45.0% | |
| TGCGGTTAGATTTCTTGGGA+AGG | + | chr5_4:16920024-16920043 | Msa0841020:CDS | 45.0% | |
| TTTCTCATCAGATTCCTGCG+CGG | + | chr5_4:16920062-16920081 | Msa0841020:CDS | 45.0% | |
| !! | GAATGATGGGTTTGACGAGG+AGG | + | chr5_4:16918460-16918479 | Msa0841020:CDS | 50.0% |
| GTTTGACGAGGAGGAAGAAG+AGG | + | chr5_4:16918469-16918488 | Msa0841020:CDS | 50.0% | |
| GGAGATTGAGGAAGAGAACG+CGG | + | chr5_4:16919066-16919085 | Msa0841020:CDS | 50.0% | |
| ATTGAGGAAGAGAACGCGGT+CGG | + | chr5_4:16919070-16919089 | Msa0841020:CDS | 50.0% | |
| TCACTCCCAACAACCCTCTT+TGG | - | chr5_4:16919122-16919141 | None:intergenic | 50.0% | |
| AGAAGCTTGAGGGTTCTGTG+AGG | + | chr5_4:16919240-16919259 | Msa0841020:CDS | 50.0% | |
| TGAGGGTTCTGTGAGGAGAA+AGG | + | chr5_4:16919247-16919266 | Msa0841020:CDS | 50.0% | |
| GAGGGTTCTGTGAGGAGAAA+GGG | + | chr5_4:16919248-16919267 | Msa0841020:CDS | 50.0% | |
| AGGGTTCTGTGAGGAGAAAG+GGG | + | chr5_4:16919249-16919268 | Msa0841020:CDS | 50.0% | |
| GGTTGAGACTTGATAGGCAC+AGG | + | chr5_4:16919270-16919289 | Msa0841020:CDS | 50.0% | |
| GATAGGCACAGGGATACTAG+TGG | + | chr5_4:16919281-16919300 | Msa0841020:CDS | 50.0% | |
| GCATGTGGATACTAGTGGAG+AGG | + | chr5_4:16919373-16919392 | Msa0841020:CDS | 50.0% | |
| GAAAAGGGTTGAGACCTGAG+AGG | + | chr5_4:16919438-16919457 | Msa0841020:CDS | 50.0% | |
| CTAGTATCCATACGCCTCTC+AGG | - | chr5_4:16919455-16919474 | None:intergenic | 50.0% | |
| ! | GAGAGGCGTATGGATACTAG+TGG | + | chr5_4:16919455-16919474 | Msa0841020:CDS | 50.0% |
| GCGTATGGATACTAGTGGAG+AGG | + | chr5_4:16919460-16919479 | Msa0841020:CDS | 50.0% | |
| !! | GTGATGATGATGGAATGCCG+AGG | + | chr5_4:16919585-16919604 | Msa0841020:CDS | 50.0% |
| GTTGCCAAGAAGGCTTCCAT+AGG | + | chr5_4:16919749-16919768 | Msa0841020:CDS | 50.0% | |
| CGAACCTATGGAAGCCTTCT+TGG | - | chr5_4:16919756-16919775 | None:intergenic | 50.0% | |
| ACAAGAGAGTGGGAGTCATG+CGG | + | chr5_4:16920006-16920025 | Msa0841020:CDS | 50.0% | |
| AGACTGTTGGGAGCTTGATC+CGG | + | chr5_4:16920120-16920139 | Msa0841020:CDS | 50.0% | |
| !! | GAATGATGGGTTTGACGAGG+AGG | + | chr5_4:16918460-16918479 | Msa0841020:CDS | 50.0% |
| GTTTGACGAGGAGGAAGAAG+AGG | + | chr5_4:16918469-16918488 | Msa0841020:CDS | 50.0% | |
| GGAGATTGAGGAAGAGAACG+CGG | + | chr5_4:16919066-16919085 | Msa0841020:CDS | 50.0% | |
| ATTGAGGAAGAGAACGCGGT+CGG | + | chr5_4:16919070-16919089 | Msa0841020:CDS | 50.0% | |
| TCACTCCCAACAACCCTCTT+TGG | - | chr5_4:16919122-16919141 | None:intergenic | 50.0% | |
| AGAAGCTTGAGGGTTCTGTG+AGG | + | chr5_4:16919240-16919259 | Msa0841020:CDS | 50.0% | |
| TGAGGGTTCTGTGAGGAGAA+AGG | + | chr5_4:16919247-16919266 | Msa0841020:CDS | 50.0% | |
| GAGGGTTCTGTGAGGAGAAA+GGG | + | chr5_4:16919248-16919267 | Msa0841020:CDS | 50.0% | |
| AGGGTTCTGTGAGGAGAAAG+GGG | + | chr5_4:16919249-16919268 | Msa0841020:CDS | 50.0% | |
| GGTTGAGACTTGATAGGCAC+AGG | + | chr5_4:16919270-16919289 | Msa0841020:CDS | 50.0% | |
| GATAGGCACAGGGATACTAG+TGG | + | chr5_4:16919281-16919300 | Msa0841020:CDS | 50.0% | |
| GCATGTGGATACTAGTGGAG+AGG | + | chr5_4:16919373-16919392 | Msa0841020:CDS | 50.0% | |
| GAAAAGGGTTGAGACCTGAG+AGG | + | chr5_4:16919438-16919457 | Msa0841020:CDS | 50.0% | |
| CTAGTATCCATACGCCTCTC+AGG | - | chr5_4:16919455-16919474 | None:intergenic | 50.0% | |
| ! | GAGAGGCGTATGGATACTAG+TGG | + | chr5_4:16919455-16919474 | Msa0841020:CDS | 50.0% |
| GCGTATGGATACTAGTGGAG+AGG | + | chr5_4:16919460-16919479 | Msa0841020:CDS | 50.0% | |
| !! | GTGATGATGATGGAATGCCG+AGG | + | chr5_4:16919585-16919604 | Msa0841020:CDS | 50.0% |
| GTTGCCAAGAAGGCTTCCAT+AGG | + | chr5_4:16919749-16919768 | Msa0841020:CDS | 50.0% | |
| CGAACCTATGGAAGCCTTCT+TGG | - | chr5_4:16919756-16919775 | None:intergenic | 50.0% | |
| ACAAGAGAGTGGGAGTCATG+CGG | + | chr5_4:16920006-16920025 | Msa0841020:CDS | 50.0% | |
| AGACTGTTGGGAGCTTGATC+CGG | + | chr5_4:16920120-16920139 | Msa0841020:CDS | 50.0% | |
| GAGGGTTGTTGGGAGTGAAG+AGG | + | chr5_4:16919124-16919143 | Msa0841020:CDS | 55.0% | |
| AGGCACAGGGATACTAGTGG+AGG | + | chr5_4:16919284-16919303 | Msa0841020:CDS | 55.0% | |
| GGCACAGGGATACTAGTGGA+GGG | + | chr5_4:16919285-16919304 | Msa0841020:CDS | 55.0% | |
| GCACAGGGATACTAGTGGAG+GGG | + | chr5_4:16919286-16919305 | Msa0841020:CDS | 55.0% | |
| ! | GTTGAGACCTGAGAGGCGTA+TGG | + | chr5_4:16919445-16919464 | Msa0841020:CDS | 55.0% |
| AGTGAGGCGAGTCTTGATGC+AGG | + | chr5_4:16919869-16919888 | Msa0841020:CDS | 55.0% | |
| GCGAGTCTTGATGCAGGTGA+GGG | + | chr5_4:16919875-16919894 | Msa0841020:CDS | 55.0% | |
| TCACAAGGGAATTTCCGCGC+AGG | - | chr5_4:16920079-16920098 | None:intergenic | 55.0% | |
| GCGGAAATTCCCTTGTGACG+AGG | + | chr5_4:16920081-16920100 | Msa0841020:CDS | 55.0% | |
| GAGGGTTGTTGGGAGTGAAG+AGG | + | chr5_4:16919124-16919143 | Msa0841020:CDS | 55.0% | |
| AGGCACAGGGATACTAGTGG+AGG | + | chr5_4:16919284-16919303 | Msa0841020:CDS | 55.0% | |
| GGCACAGGGATACTAGTGGA+GGG | + | chr5_4:16919285-16919304 | Msa0841020:CDS | 55.0% | |
| GCACAGGGATACTAGTGGAG+GGG | + | chr5_4:16919286-16919305 | Msa0841020:CDS | 55.0% | |
| ! | GTTGAGACCTGAGAGGCGTA+TGG | + | chr5_4:16919445-16919464 | Msa0841020:CDS | 55.0% |
| AGTGAGGCGAGTCTTGATGC+AGG | + | chr5_4:16919869-16919888 | Msa0841020:CDS | 55.0% | |
| GCGAGTCTTGATGCAGGTGA+GGG | + | chr5_4:16919875-16919894 | Msa0841020:CDS | 55.0% | |
| TCACAAGGGAATTTCCGCGC+AGG | - | chr5_4:16920079-16920098 | None:intergenic | 55.0% | |
| GCGGAAATTCCCTTGTGACG+AGG | + | chr5_4:16920081-16920100 | Msa0841020:CDS | 55.0% | |
| AGGAAGAGAACGCGGTCGGT+TGG | + | chr5_4:16919074-16919093 | Msa0841020:CDS | 60.0% | |
| GGAAGAGAACGCGGTCGGTT+GGG | + | chr5_4:16919075-16919094 | Msa0841020:CDS | 60.0% | |
| GAAGAGAACGCGGTCGGTTG+GGG | + | chr5_4:16919076-16919095 | Msa0841020:CDS | 60.0% | |
| GGCGAGTCTTGATGCAGGTG+AGG | + | chr5_4:16919874-16919893 | Msa0841020:CDS | 60.0% | |
| AGGAAGAGAACGCGGTCGGT+TGG | + | chr5_4:16919074-16919093 | Msa0841020:CDS | 60.0% | |
| GGAAGAGAACGCGGTCGGTT+GGG | + | chr5_4:16919075-16919094 | Msa0841020:CDS | 60.0% | |
| GAAGAGAACGCGGTCGGTTG+GGG | + | chr5_4:16919076-16919095 | Msa0841020:CDS | 60.0% | |
| GGCGAGTCTTGATGCAGGTG+AGG | + | chr5_4:16919874-16919893 | Msa0841020:CDS | 60.0% | |
| ! | GCGGTCGGTTGGGGAGGTTT+TGG | + | chr5_4:16919085-16919104 | Msa0841020:CDS | 65.0% |
| TTGTGATCGGGCAGCACGCG+AGG | + | chr5_4:16919802-16919821 | Msa0841020:CDS | 65.0% | |
| ! | GCGGTCGGTTGGGGAGGTTT+TGG | + | chr5_4:16919085-16919104 | Msa0841020:CDS | 65.0% |
| TTGTGATCGGGCAGCACGCG+AGG | + | chr5_4:16919802-16919821 | Msa0841020:CDS | 65.0% | |
| GAGAACGCGGTCGGTTGGGG+AGG | + | chr5_4:16919079-16919098 | Msa0841020:CDS | 70.0% | |
| GAGAACGCGGTCGGTTGGGG+AGG | + | chr5_4:16919079-16919098 | Msa0841020:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 16918338 | 16920189 | 16918338 | ID=Msa0841020;Name=Msa0841020 |
| chr5_4 | mRNA | 16918338 | 16920189 | 16918338 | ID=Msa0841020-mRNA-1;Parent=Msa0841020;Name=Msa0841020-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|565 |
| chr5_4 | exon | 16918338 | 16918605 | 16918338 | ID=Msa0841020-mRNA-1:exon:7287;Parent=Msa0841020-mRNA-1 |
| chr5_4 | exon | 16918760 | 16920189 | 16918760 | ID=Msa0841020-mRNA-1:exon:7288;Parent=Msa0841020-mRNA-1 |
| chr5_4 | CDS | 16918338 | 16918605 | 16918338 | ID=Msa0841020-mRNA-1:cds;Parent=Msa0841020-mRNA-1 |
| chr5_4 | CDS | 16918760 | 16920189 | 16918760 | ID=Msa0841020-mRNA-1:cds;Parent=Msa0841020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
