AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0848320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0848320 MtrunA17_Chr5g0409411 99.164 598 5 0 1 598 1 598 0.0 1241
Msa0848320 MtrunA17_Chr8g0369481 76.000 600 138 3 1 598 1 596 0.0 954
Msa0848320 MtrunA17_Chr1g0203741 45.545 606 302 12 11 590 14 617 0.0 544
Msa0848320 MtrunA17_Chr6g0472571 48.767 527 257 8 72 590 105 626 2.85e-180 524
Msa0848320 MtrunA17_Chr8g0350391 47.727 528 265 9 72 590 105 630 4.74e-178 518
Msa0848320 MtrunA17_Chr8g0388881 46.970 528 266 8 72 590 98 620 7.64e-178 517
Msa0848320 MtrunA17_Chr4g0055031 42.951 610 314 11 13 597 10 610 1.31e-175 511
Msa0848320 MtrunA17_Chr7g0246701 47.874 541 261 11 73 598 102 636 1.00e-173 507
Msa0848320 MtrunA17_Chr8g0361791 43.000 600 312 11 13 590 9 600 3.45e-168 492
Msa0848320 MtrunA17_Chr5g0416991 41.667 600 319 10 13 590 9 599 5.65e-167 489
Msa0848320 MtrunA17_Chr7g0214551 46.139 518 269 7 57 566 28 543 1.14e-163 479
Msa0848320 MtrunA17_Chr3g0092501 42.738 599 311 14 13 590 10 597 6.74e-163 478
Msa0848320 MtrunA17_Chr7g0246681 43.503 531 274 9 71 591 74 588 1.19e-152 451
Msa0848320 MtrunA17_Chr1g0167381 38.818 626 325 11 13 595 10 620 4.87e-151 449
Msa0848320 MtrunA17_Chr8g0350351 40.250 559 297 10 49 590 62 600 1.61e-149 444
Msa0848320 MtrunA17_Chr1g0183721 40.134 598 327 11 13 595 9 590 2.11e-148 441
Msa0848320 MtrunA17_Chr3g0112341 43.015 544 282 11 60 589 138 667 2.56e-146 438
Msa0848320 MtrunA17_Chr1g0187601 40.727 550 291 9 66 595 85 619 9.73e-145 432
Msa0848320 MtrunA17_Chr8g0372471 43.074 527 266 11 81 593 387 893 1.79e-140 430
Msa0848320 MtrunA17_Chr5g0435751 40.787 559 288 11 38 587 93 617 8.28e-140 420
Msa0848320 MtrunA17_Chr3g0130381 42.322 534 269 14 81 595 268 781 5.47e-139 423
Msa0848320 MtrunA17_Chr1g0159741 41.762 522 277 12 81 589 151 658 6.00e-138 416
Msa0848320 MtrunA17_Chr5g0437501 40.445 539 272 13 81 597 101 612 1.24e-134 406
Msa0848320 MtrunA17_Chr3g0125511 41.651 533 271 15 81 593 233 745 1.94e-132 405
Msa0848320 MtrunA17_Chr3g0113981 41.109 523 270 12 81 592 175 670 6.36e-131 398
Msa0848320 MtrunA17_Chr8g0384431 40.490 531 279 13 53 566 275 785 1.58e-129 399
Msa0848320 MtrunA17_Chr1g0171781 38.436 601 315 15 25 590 23 603 1.46e-126 385
Msa0848320 MtrunA17_Chr1g0155141 36.641 524 291 13 80 592 208 701 4.56e-110 345
Msa0848320 MtrunA17_Chr5g0426281 32.541 547 315 14 75 591 149 671 1.19e-96 309
Msa0848320 MtrunA17_Chr3g0115931 31.597 576 343 15 51 591 130 689 5.20e-95 305
Msa0848320 MtrunA17_Chr5g0404771 51.351 222 103 3 81 299 329 548 5.22e-70 236
Msa0848320 MtrunA17_Chr5g0404761 36.207 290 160 8 322 597 1 279 7.90e-62 206
Msa0848320 MtrunA17_Chr4g0043121 29.762 336 218 6 55 382 71 396 4.02e-50 179
Msa0848320 MtrunA17_Chr4g0043131 47.297 148 68 4 446 587 37 180 5.43e-37 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0848320 AT1G31850.1 73.588 602 151 4 4 597 2 603 0.0 956
Msa0848320 AT1G31850.2 73.588 602 151 4 4 597 2 603 0.0 956
Msa0848320 AT1G31850.4 73.588 602 151 4 4 597 2 603 0.0 956
Msa0848320 AT1G31850.3 73.588 602 151 4 4 597 2 603 0.0 956
Msa0848320 AT4G19120.1 74.000 600 152 3 1 598 1 598 0.0 953
Msa0848320 AT4G19120.2 74.000 600 152 3 1 598 1 598 0.0 953
Msa0848320 AT4G19120.3 74.451 501 124 3 1 499 1 499 0.0 798
Msa0848320 AT4G10440.1 46.629 534 270 8 72 594 93 622 4.47e-178 518
Msa0848320 AT1G33170.1 46.255 534 273 8 72 595 110 639 1.12e-175 513
Msa0848320 AT4G00750.1 42.459 610 313 12 14 590 18 622 7.43e-173 505
Msa0848320 AT2G45750.1 46.516 531 272 7 71 590 86 615 1.78e-171 501
Msa0848320 AT4G18030.1 43.137 612 316 11 10 596 5 609 1.94e-170 498
Msa0848320 AT1G26850.2 41.408 611 325 13 14 597 11 615 5.57e-165 484
Msa0848320 AT1G26850.1 41.408 611 325 13 14 597 11 615 5.57e-165 484
Msa0848320 AT2G43200.2 45.703 512 268 8 72 576 91 599 1.86e-162 478
Msa0848320 AT2G43200.1 45.703 512 268 8 72 576 91 599 1.86e-162 478
Msa0848320 AT4G00740.1 42.514 541 282 10 66 595 77 599 4.40e-157 464
Msa0848320 AT4G00740.2 42.514 541 282 10 66 595 77 599 4.40e-157 464
Msa0848320 AT2G39750.1 43.382 544 281 11 57 589 164 691 1.37e-148 445
Msa0848320 AT3G23300.2 41.774 541 291 8 69 595 76 606 3.49e-146 436
Msa0848320 AT3G23300.1 41.774 541 291 8 69 595 76 606 3.49e-146 436
Msa0848320 AT5G06050.1 41.575 546 290 11 56 589 135 663 1.08e-145 437
Msa0848320 AT1G04430.1 41.026 585 305 14 34 595 51 618 3.27e-145 434
Msa0848320 AT1G04430.3 41.026 585 305 14 34 595 51 618 3.27e-145 434
Msa0848320 AT1G04430.2 41.026 585 305 14 34 595 51 618 3.27e-145 434
Msa0848320 AT2G34300.2 43.797 532 263 12 81 595 250 762 5.58e-145 438
Msa0848320 AT2G34300.3 43.797 532 263 12 81 595 250 762 5.58e-145 438
Msa0848320 AT2G34300.1 43.797 532 263 12 81 595 250 762 5.58e-145 438
Msa0848320 AT4G14360.1 41.774 541 291 8 69 595 73 603 3.78e-142 426
Msa0848320 AT4G14360.2 41.774 541 291 8 69 595 73 603 3.78e-142 426
Msa0848320 AT5G64030.1 43.289 529 267 11 81 593 308 819 2.02e-140 428
Msa0848320 AT1G29470.1 42.857 532 268 13 81 595 250 762 2.65e-140 426
Msa0848320 AT1G29470.2 42.857 532 268 13 81 595 250 762 2.65e-140 426
Msa0848320 AT1G77260.1 41.293 557 290 13 54 589 115 655 3.37e-140 422
Msa0848320 AT3G56080.1 43.048 525 258 14 81 592 114 610 3.63e-137 413
Msa0848320 AT2G40280.1 41.697 554 268 16 64 598 72 589 4.13e-137 412
Msa0848320 AT5G14430.1 39.833 600 316 15 22 591 21 605 6.40e-137 412
Msa0848320 AT3G51070.1 41.495 535 272 12 81 595 381 894 4.73e-136 419
Msa0848320 AT5G14430.2 39.333 600 319 15 22 591 21 605 1.49e-134 406
Msa0848320 AT3G10200.1 37.124 598 334 13 16 590 10 588 9.86e-130 393
Msa0848320 AT1G26850.3 41.393 488 255 11 14 476 11 492 4.93e-128 386
Msa0848320 AT5G04060.1 36.529 605 335 12 16 590 12 597 1.62e-124 380
Msa0848320 AT3G56080.2 45.197 458 217 13 81 525 114 550 8.65e-124 376
Msa0848320 AT3G10200.2 36.007 586 326 13 16 571 10 576 4.75e-121 371
Msa0848320 AT3G51070.2 42.174 460 228 11 81 520 381 822 9.62e-118 369
Msa0848320 AT1G19430.1 36.053 527 291 15 80 592 230 724 1.13e-108 343
Msa0848320 AT1G19430.3 36.053 527 291 15 80 592 230 724 1.13e-108 343
Msa0848320 AT1G78240.1 31.086 608 354 17 22 587 92 676 8.02e-94 303
Msa0848320 AT1G78240.2 31.086 608 354 17 22 587 92 676 8.02e-94 303
Msa0848320 AT1G13860.4 31.588 554 313 11 72 591 81 602 5.96e-92 295
Msa0848320 AT1G13860.3 31.588 554 313 11 72 591 81 602 5.96e-92 295
Msa0848320 AT1G13860.1 31.588 554 313 11 72 591 81 602 5.96e-92 295
Msa0848320 AT1G13860.5 31.588 554 313 11 72 591 81 602 5.96e-92 295
Msa0848320 AT2G03480.2 32.092 564 316 14 52 587 66 590 1.36e-84 276
Msa0848320 AT2G03480.1 32.270 564 326 16 52 587 66 601 4.61e-84 275
Msa0848320 AT1G13860.2 31.828 465 265 9 156 589 1 444 2.25e-77 253
Msa0848320 AT1G19430.2 33.924 395 219 13 80 461 230 595 7.47e-64 221
Msa0848320 AT2G03480.3 30.882 340 217 7 52 382 66 396 1.45e-44 164

Find 186 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCGTCCCGGAGGATTT+TGG 0.137518 5_4:+32712802 Msa0848320:CDS
ATGAATGTTGTTTCATCTTA+TGG 0.183938 5_4:+32713365 Msa0848320:CDS
CTTATCCCATGGACAGAATT+TGG 0.187513 5_4:+32712515 Msa0848320:CDS
TCCCTTTGTTTCTCTACTTC+TGG 0.201038 5_4:-32714481 None:intergenic
TTTGAAACTTGACTGATTCT+TGG 0.212129 5_4:-32714567 None:intergenic
TGAACAAGTGAAATCCTTTC+AGG 0.225038 5_4:-32713170 None:intergenic
TGATAATCATTGCTGCATTC+AGG 0.238492 5_4:-32711441 None:intergenic
TCGAGACTGTCGTCACATTT+TGG 0.252715 5_4:-32713032 None:intergenic
CCCTTCAAACTCCTTTGATA+TGG 0.267872 5_4:+32712475 Msa0848320:CDS
ACTGACCCATCTTTGATTCC+TGG 0.271124 5_4:-32712016 None:intergenic
GGAGAGAAATTTCAATTTCC+TGG 0.292268 5_4:+32711932 Msa0848320:CDS
TGCATGGGATTAAATGTATA+AGG 0.294395 5_4:+32714678 Msa0848320:three_prime_UTR
GAAGAATTCGGTGAATTTCT+TGG 0.297915 5_4:-32712785 None:intergenic
TGCGGATGCCATTACAACTA+TGG 0.303028 5_4:+32714285 Msa0848320:CDS
CTTGGTGGAGTCTTTAAATC+TGG 0.314276 5_4:+32711324 Msa0848320:CDS
TTCAACCTTTGAGGCCATTT+CGG 0.329744 5_4:-32713140 None:intergenic
ATCTCACTTATTTCTTTCAT+TGG 0.334017 5_4:+32709631 Msa0848320:five_prime_UTR
CAAATTGAACCTGAGCTTCA+TGG 0.341870 5_4:-32712394 None:intergenic
CTTCAAATTATACAACAAAA+AGG 0.343104 5_4:+32712938 Msa0848320:CDS
CAACATTCATCTCTACTCTT+TGG 0.346033 5_4:-32711722 None:intergenic
TTCTGTTGTGTGTTTATCAA+TGG 0.347914 5_4:-32709713 None:intergenic
AAAACTACAGGGAGTGTATT+AGG 0.348105 5_4:-32713389 None:intergenic
ATCATAGCAAGCGTTGTCTT+TGG 0.357055 5_4:-32712985 None:intergenic
CCTTGATCAATGATCCTTTG+TGG 0.361183 5_4:+32713339 Msa0848320:CDS
GTTCTTTAGTACTATTTCCT+TGG 0.366358 5_4:+32710772 Msa0848320:intron
CTACTCTTTGGCCATCTGAT+TGG 0.368686 5_4:-32711710 None:intergenic
CTTGATCAATGATCCTTTGT+GGG 0.371015 5_4:+32713340 Msa0848320:CDS
TTATGATCATTTATAATTCA+AGG 0.378013 5_4:+32714837 Msa0848320:three_prime_UTR
CTCTTTGGCCATCTGATTGG+AGG 0.385100 5_4:-32711707 None:intergenic
TTTATGTTAGGTTGCTAGCT+GGG 0.388813 5_4:+32712316 Msa0848320:intron
TAATCAGCATTGGTTGATAA+AGG 0.396465 5_4:+32711907 Msa0848320:CDS
CGCTTGTTTCGTTGTTCCAA+TGG 0.398244 5_4:+32713085 Msa0848320:CDS
GCCCGCCTGGTCGCAAAATC+CGG 0.400319 5_4:-32714234 None:intergenic
ATCTTGTTTGTGCCAAGGTC+AGG 0.401010 5_4:-32713269 None:intergenic
TGTTGAGAAAGAGAAGATAT+TGG 0.402770 5_4:+32714354 Msa0848320:CDS
CTGACCCATCTTTGATTCCT+GGG 0.404275 5_4:-32712015 None:intergenic
TTATCGGTACCTTCCATGAT+TGG 0.404488 5_4:+32713423 Msa0848320:CDS
TACCTATAGACTTACTTTGT+TGG 0.405719 5_4:+32711619 Msa0848320:CDS
ACATATTCACCAACACCATT+AGG 0.406899 5_4:-32711971 None:intergenic
TAGCTGGGGTGGTGACTTGT+TGG 0.407104 5_4:+32712331 Msa0848320:CDS
GCCTCACGTTCATGCCGAAA+TGG 0.407245 5_4:+32713126 Msa0848320:CDS
ATCCTCCGGGACGAAGAATT+CGG 0.410892 5_4:-32712797 None:intergenic
TGCTTAGTTCCTCCTCCTCC+TGG 0.414185 5_4:+32711677 Msa0848320:CDS
CGTGGTATCCCAGCAATTCT+TGG 0.416355 5_4:+32712425 Msa0848320:CDS
GTCAGAGATCGGTTCTTGTT+CGG 0.419349 5_4:-32711258 None:intergenic
ATTTATGTTAGGTTGCTAGC+TGG 0.420475 5_4:+32712315 Msa0848320:intron
TGCTTGTTAATCCAATCATA+TGG 0.422387 5_4:-32711878 None:intergenic
GAGATGACACCAAGAATTGC+TGG 0.425210 5_4:-32712434 None:intergenic
CAAATTCTGTCCATGGGATA+AGG 0.432198 5_4:-32712514 None:intergenic
CTGCATTCAGGGAAACTAAA+GGG 0.432642 5_4:-32711429 None:intergenic
GAAAGGATTTCACTTGTTCA+AGG 0.433009 5_4:+32713173 Msa0848320:CDS
AGTTTCAAACATACCAATCA+TGG 0.434398 5_4:-32713436 None:intergenic
TCCCTTCGCCATAGTTGTAA+TGG 0.435017 5_4:-32714293 None:intergenic
GAAGTATGTAATGTTGGAAA+TGG 0.436291 5_4:+32714210 Msa0848320:CDS
GAAACAAAGGGAAACGAATT+CGG 0.437900 5_4:+32714492 Msa0848320:three_prime_UTR
GATAATCATTGCTGCATTCA+GGG 0.443927 5_4:-32711440 None:intergenic
GGAGTGTACCATGCTGAATC+TGG 0.456691 5_4:-32713056 None:intergenic
ATGGATATGAATACAGCTTA+TGG 0.462958 5_4:+32713302 Msa0848320:CDS
TGAAGTAGGTCATAGGTTCT+AGG 0.468060 5_4:-32713584 None:intergenic
TAGATAATTTATTCTTTGCA+TGG 0.470045 5_4:+32714662 Msa0848320:three_prime_UTR
GAGATCGGTTCTTGTTCGGC+TGG 0.470906 5_4:-32711254 None:intergenic
ATCTAGGATCATGAAGCATA+AGG 0.471201 5_4:+32711215 Msa0848320:exon
ACAGGAATGTGCCATATGAT+TGG 0.476125 5_4:+32711867 Msa0848320:intron
AGGCCTCGATCGAAAACTAC+AGG 0.476192 5_4:-32713401 None:intergenic
GGTGCAACATTCAACCTTTG+AGG 0.476749 5_4:-32713149 None:intergenic
GTCAGAACTGCAATTGATAC+TGG 0.477826 5_4:+32712037 Msa0848320:CDS
TGAGCTTCATGGTTATCTCT+TGG 0.482556 5_4:-32712383 None:intergenic
TGAAATGAAGTATGTAATGT+TGG 0.482893 5_4:+32714204 Msa0848320:CDS
TAATGTGAAATTTGAAGAGA+TGG 0.485116 5_4:+32709486 Msa0848320:five_prime_UTR
TGTTGTGTGTTTATCAATGG+TGG 0.487427 5_4:-32709710 None:intergenic
ATCGGTTCTTGTTCGGCTGG+TGG 0.487576 5_4:-32711251 None:intergenic
TTCTTATCTTGTTTGTGCCA+AGG 0.488608 5_4:-32713274 None:intergenic
GAATTACCAAATTCTGTCCA+TGG 0.489900 5_4:-32712521 None:intergenic
CTCATAGTTGACTGGTGGAC+CGG 0.491832 5_4:-32712832 None:intergenic
CATCTTGATCCTGAGTTGGA+TGG 0.492062 5_4:-32714400 None:intergenic
AGATAATTTATTCTTTGCAT+GGG 0.492796 5_4:+32714663 Msa0848320:three_prime_UTR
ATCATATTCTATGCTTTCTG+TGG 0.492910 5_4:-32714787 None:intergenic
TGAAGAGATGGAAATGAAAG+TGG 0.493444 5_4:+32709498 Msa0848320:five_prime_UTR
AAATTTCAATTTCCTGGTGG+AGG 0.497318 5_4:+32711938 Msa0848320:CDS
CTGATCCCAGGAATCAAAGA+TGG 0.497573 5_4:+32712010 Msa0848320:CDS
AAAAGGATGACATATATGTA+TGG 0.500938 5_4:+32712955 Msa0848320:CDS
TTCCAACAAAGTAAGTCTAT+AGG 0.502688 5_4:-32711621 None:intergenic
ATCAGCATGAAGTAGGTCAT+AGG 0.503060 5_4:-32713591 None:intergenic
TCATATTCTATGCTTTCTGT+GGG 0.503470 5_4:-32714786 None:intergenic
TGACATATATGTATGGCAAA+AGG 0.507120 5_4:+32712962 Msa0848320:CDS
TTCAAATATTTACACATACA+AGG 0.508770 5_4:-32709461 None:intergenic
AAAGAACCTGAGGATTGCTT+AGG 0.514314 5_4:-32711396 None:intergenic
GGCTTGTAACCAGGAGGAGG+AGG 0.516627 5_4:-32711686 None:intergenic
GTAGAGATGAATGTTGGTAC+AGG 0.518059 5_4:+32711729 Msa0848320:CDS
CTGATTGGAGGCTTGTAACC+AGG 0.519130 5_4:-32711695 None:intergenic
AAGAAGTTGTTGCCTGACCT+TGG 0.519821 5_4:+32713257 Msa0848320:CDS
TCAGTCATGATAACAGTAAG+TGG 0.521028 5_4:+32713213 Msa0848320:CDS
TTTGGAGGATAGGTGTCTCT+AGG 0.521324 5_4:-32713014 None:intergenic
GCCATATCAAAGGAGTTTGA+AGG 0.521561 5_4:-32712476 None:intergenic
GGACAAAACCCAAAATCCTC+CGG 0.525700 5_4:-32712811 None:intergenic
GGAGGTACTATGTTTCCTAA+TGG 0.527366 5_4:+32711956 Msa0848320:CDS
AAGAGATAACCATGAAGCTC+AGG 0.528994 5_4:+32712385 Msa0848320:CDS
CACCTACGCTCATAGTTGAC+TGG 0.531226 5_4:-32712840 None:intergenic
TTATGTTAGGTTGCTAGCTG+GGG 0.531407 5_4:+32712317 Msa0848320:intron
TCTTCACTGCTGAAAGCCAC+AGG 0.536372 5_4:+32713618 Msa0848320:CDS
TATGACCTACTTCATGCTGA+TGG 0.537222 5_4:+32713593 Msa0848320:CDS
GGTTGAATGTTGCACCTGAA+AGG 0.539137 5_4:+32713156 Msa0848320:CDS
GTGAGATTTGTTTGTGTGTG+AGG 0.539708 5_4:-32709615 None:intergenic
GATTCACCTAAGCAATCCTC+AGG 0.541290 5_4:+32711390 Msa0848320:CDS
TGCCATTACAACTATGGCGA+AGG 0.541714 5_4:+32714291 Msa0848320:CDS
CCACAAAGGATCATTGATCA+AGG 0.542881 5_4:-32713339 None:intergenic
ATGTAATGTTGGAAATGGAC+CGG 0.544880 5_4:+32714215 Msa0848320:CDS
AAACAAGATAAGAAATGTGA+TGG 0.544976 5_4:+32713283 Msa0848320:CDS
GCTGCATTCAGGGAAACTAA+AGG 0.545484 5_4:-32711430 None:intergenic
AGCAGAAGTCTAATCAGCAT+TGG 0.548041 5_4:+32711897 Msa0848320:CDS
TCATGCCGAAATGGCCTCAA+AGG 0.549994 5_4:+32713135 Msa0848320:CDS
TGAGAAGAAGAAGAAGTGAA+AGG 0.550224 5_4:-32709656 None:intergenic
TTCCAGAAGTAGAGAAACAA+AGG 0.550685 5_4:+32714479 Msa0848320:three_prime_UTR
TCAAAGGAGTTTGAAGGGAA+AGG 0.552291 5_4:-32712470 None:intergenic
GTCTTTAAATCTGGAAACAA+TGG 0.552619 5_4:+32711333 Msa0848320:CDS
TTAATGCAAGATCTGATCCC+AGG 0.555758 5_4:+32711998 Msa0848320:CDS
TGATCGCCGCAGTCAGAGAT+CGG 0.556133 5_4:-32711269 None:intergenic
CAGCATTGGTTGATAAAGGA+AGG 0.557499 5_4:+32711911 Msa0848320:CDS
GAGATGGAAATGAAAGTGGA+AGG 0.559591 5_4:+32709502 Msa0848320:five_prime_UTR
GTCGAATTGCGATTAATCGC+GGG 0.562441 5_4:+32710867 Msa0848320:five_prime_UTR
AATCATGGAAGGTACCGATA+AGG 0.562538 5_4:-32713421 None:intergenic
AACTATGAGCGTAGGTGGCG+CGG 0.564106 5_4:+32712846 Msa0848320:CDS
TGTTAGGTTGCTAGCTGGGG+TGG 0.567384 5_4:+32712320 Msa0848320:intron
CCATATCAAAGGAGTTTGAA+GGG 0.568671 5_4:-32712475 None:intergenic
ATCACTATCATTGTTCTGTG+TGG 0.571055 5_4:+32711288 Msa0848320:CDS
GCCATTTCGGCATGAACGTG+AGG 0.571385 5_4:-32713127 None:intergenic
GAGAAATTTCAATTTCCTGG+TGG 0.571653 5_4:+32711935 Msa0848320:CDS
TCCAGAAGTAGAGAAACAAA+GGG 0.571807 5_4:+32714480 Msa0848320:three_prime_UTR
TTGTCATCTTGATCCTGAGT+TGG 0.573323 5_4:-32714404 None:intergenic
CTTAATTTGCAAAGAACCTG+AGG 0.573339 5_4:-32711406 None:intergenic
CTGTGGCAGCCATCCAACTC+AGG 0.575238 5_4:+32714391 Msa0848320:CDS
GACAAAACCCAAAATCCTCC+GGG 0.575836 5_4:-32712810 None:intergenic
AATTACCAAATTCTGTCCAT+GGG 0.580974 5_4:-32712520 None:intergenic
CTATTTCCTTGGTTCTACGT+TGG 0.582249 5_4:+32710783 Msa0848320:five_prime_UTR
AATACCTTTGGATCTGTGCA+TGG 0.582765 5_4:-32711474 None:intergenic
CTGCAATTGATACTGGTTGT+GGG 0.583160 5_4:+32712044 Msa0848320:CDS
TACTCCATGCACAGATCCAA+AGG 0.583464 5_4:+32711470 Msa0848320:CDS
TCACAGAGATGGAGAAAGTA+CGG 0.584400 5_4:+32711596 Msa0848320:intron
ATTCACCGAATTCTTCGTCC+CGG 0.585958 5_4:+32712792 Msa0848320:CDS
AGGATCATGAAGCATAAGGA+TGG 0.586005 5_4:+32711219 Msa0848320:exon
GCTCTAGATGCCTTATCCCA+TGG 0.586277 5_4:+32712504 Msa0848320:CDS
CAAAGAGTAGAGATGAATGT+TGG 0.586343 5_4:+32711723 Msa0848320:CDS
AGAATCCATCAGCATGAAGT+AGG 0.586900 5_4:-32713598 None:intergenic
CAGTCAACTATGAGCGTAGG+TGG 0.587123 5_4:+32712841 Msa0848320:CDS
CACCGAATTCTTCGTCCCGG+AGG 0.588572 5_4:+32712795 Msa0848320:CDS
GTTCAATTTGCTCTTGAGCG+TGG 0.589442 5_4:+32712407 Msa0848320:CDS
CCGCAAAATAACTCGACTCT+CGG 0.592375 5_4:-32714267 None:intergenic
AGATCGCAGCGCAGCCACGA+GGG 0.595911 5_4:-32710834 None:intergenic
ACTATGTTTCCTAATGGTGT+TGG 0.597032 5_4:+32711962 Msa0848320:CDS
ACTGCAATTGATACTGGTTG+TGG 0.599923 5_4:+32712043 Msa0848320:CDS
GGAGGCTTGTAACCAGGAGG+AGG 0.604710 5_4:-32711689 None:intergenic
AGATGACACCAAGAATTGCT+GGG 0.605182 5_4:-32712433 None:intergenic
ACACACAACAGAACAAAACA+AGG 0.605314 5_4:+32709723 Msa0848320:five_prime_UTR
TGTTTATCAATGGTGGAATG+TGG 0.609278 5_4:-32709703 None:intergenic
TGTCGAATTGCGATTAATCG+CGG 0.610314 5_4:+32710866 Msa0848320:five_prime_UTR
TGTGTGTGAGGCTAAACTAA+AGG 0.612907 5_4:-32709603 None:intergenic
TGATCCCAGGAATCAAAGAT+GGG 0.614158 5_4:+32712011 Msa0848320:CDS
GCCATTACAACTATGGCGAA+GGG 0.619558 5_4:+32714292 Msa0848320:CDS
GTTACAAGCCTCCAATCAGA+TGG 0.620710 5_4:+32711699 Msa0848320:CDS
CTACGCTCATAGTTGACTGG+TGG 0.622282 5_4:-32712837 None:intergenic
TGAATCAAGTGATTTCTGAA+TGG 0.624350 5_4:-32711373 None:intergenic
AACGGTGGAAGAGCAAAGAT+CGG 0.628576 5_4:+32712878 Msa0848320:CDS
GATATGAATACAGCTTATGG+TGG 0.634230 5_4:+32713305 Msa0848320:CDS
AGAGGGGACAGCAAGGCACA+TGG 0.634467 5_4:+32709545 Msa0848320:five_prime_UTR
CTATGGCGAAGGGAATGAGA+TGG 0.639501 5_4:+32714302 Msa0848320:CDS
AAGATCGCAGCGCAGCCACG+AGG 0.645670 5_4:-32710835 None:intergenic
GGTGGTGACTTGTTGGATCG+CGG 0.646853 5_4:+32712338 Msa0848320:CDS
TTATTATAGTCTTACCCTCG+TGG 0.648269 5_4:+32710820 Msa0848320:five_prime_UTR
GTCTCGAACCAGATTCAGCA+TGG 0.653935 5_4:+32713048 Msa0848320:CDS
AGAGCAATGAGCCATATCAA+AGG 0.654623 5_4:-32712486 None:intergenic
TGTGCAGCGGTAAGAAAGAG+CGG 0.655186 5_4:+32714438 Msa0848320:three_prime_UTR
TCAAACATACCAATCATGGA+AGG 0.655538 5_4:-32713432 None:intergenic
ACAACATTCATAACCCACAA+AGG 0.657750 5_4:-32713353 None:intergenic
GGCCTCGATCGAAAACTACA+GGG 0.664815 5_4:-32713400 None:intergenic
TGCAATTGATACTGGTTGTG+GGG 0.666739 5_4:+32712045 Msa0848320:CDS
ACAACGAAACAAGCGCGAAG+CGG 0.670028 5_4:-32713077 None:intergenic
CTCAGACCAACGTAGAACCA+AGG 0.671891 5_4:-32710789 None:intergenic
CACCAGTCAACTATGAGCGT+AGG 0.677148 5_4:+32712838 Msa0848320:CDS
CACACAACAGAACAAAACAA+GGG 0.684665 5_4:+32709724 Msa0848320:five_prime_UTR
GCGCGGATGGAACACAACGG+TGG 0.695965 5_4:+32712863 Msa0848320:CDS
GGAAACATAGTACCTCCACC+AGG 0.698372 5_4:-32711950 None:intergenic
ATTGGAGGCTTGTAACCAGG+AGG 0.710676 5_4:-32711692 None:intergenic
CAAGAACCGATCTCTGACTG+CGG 0.721103 5_4:+32711263 Msa0848320:CDS
AAACTTATGAAACTGTGCAG+CGG 0.721415 5_4:+32714425 Msa0848320:three_prime_UTR
CAGATTTAAAGACTCCACCA+AGG 0.721559 5_4:-32711323 None:intergenic
GTGGCGCGGATGGAACACAA+CGG 0.793897 5_4:+32712860 Msa0848320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GCAAAAATAGTTTATATAAA+TGG + chr5_4:32709572-32709591 Msa0848320:five_prime_UTR 15.0%
!! TAATTGTAAAAAGGTTAAAA+GGG - chr5_4:32709977-32709996 None:intergenic 15.0%
!! ATAATTGTAAAAAGGTTAAA+AGG - chr5_4:32709978-32709997 None:intergenic 15.0%
!! TTGATTGTATAATTGTAAAA+AGG - chr5_4:32709986-32710005 None:intergenic 15.0%
!!! TTTTTGAATTTTGATTATGT+CGG + chr5_4:32710473-32710492 Msa0848320:intron 15.0%
!! TTAGTATTAATTAATACCTT+TGG - chr5_4:32711489-32711508 None:intergenic 15.0%
!! TATAAACACTTATAATAAGA+TGG + chr5_4:32713711-32713730 Msa0848320:intron 15.0%
!! TTATGATCATTTATAATTCA+AGG + chr5_4:32714837-32714856 Msa0848320:three_prime_UTR 15.0%
!! TTCAAATATTTACACATACA+AGG - chr5_4:32709464-32709483 None:intergenic 20.0%
!! TAAAATAGCAATGAAAGAAA+GGG - chr5_4:32709777-32709796 None:intergenic 20.0%
!! ATAAAATAGCAATGAAAGAA+AGG - chr5_4:32709778-32709797 None:intergenic 20.0%
!! TAAATCATAACCAATTAGAA+TGG + chr5_4:32710082-32710101 Msa0848320:intron 20.0%
!! AATATTCCTATACACAAAAA+AGG - chr5_4:32710306-32710325 None:intergenic 20.0%
!! GAAAGAGAAACAAAAAAAAA+AGG - chr5_4:32710618-32710637 None:intergenic 20.0%
!!! AGAACAAATATCTAGAATTA+TGG - chr5_4:32711023-32711042 None:intergenic 20.0%
!! TCTACAAAAAATTTGATGTT+TGG + chr5_4:32711515-32711534 Msa0848320:intron 20.0%
!! ACTATTCAAAAGTAAAATGA+AGG - chr5_4:32712081-32712100 None:intergenic 20.0%
!!! GAATAGTTATTTAGTTTCAA+TGG + chr5_4:32712094-32712113 Msa0848320:intron 20.0%
!!! TATTCATATCTTATGCTTTT+AGG + chr5_4:32712750-32712769 Msa0848320:intron 20.0%
!! CTTCAAATTATACAACAAAA+AGG + chr5_4:32712938-32712957 Msa0848320:CDS 20.0%
!! AACTTTAAATATGAACCATA+AGG + chr5_4:32713455-32713474 Msa0848320:intron 20.0%
!!! TGTTTTTGTGTTATATCAAA+TGG + chr5_4:32713493-32713512 Msa0848320:intron 20.0%
!!! TTATATCAAATGGTTTTCTT+TGG + chr5_4:32713503-32713522 Msa0848320:intron 20.0%
!!! TTTGTTATAAGATAAGTCTA+AGG + chr5_4:32713858-32713877 Msa0848320:intron 20.0%
!! TTGTTATAAGATAAGTCTAA+GGG + chr5_4:32713859-32713878 Msa0848320:intron 20.0%
!! TAGATAATTTATTCTTTGCA+TGG + chr5_4:32714662-32714681 Msa0848320:three_prime_UTR 20.0%
!! AGATAATTTATTCTTTGCAT+GGG + chr5_4:32714663-32714682 Msa0848320:three_prime_UTR 20.0%
!! AAAAAATAGATAAACAAGAG+TGG - chr5_4:32714708-32714727 None:intergenic 20.0%
! TAATGTGAAATTTGAAGAGA+TGG + chr5_4:32709486-32709505 Msa0848320:five_prime_UTR 25.0%
! TTGAAGATTGAACAAAAAGA+GGG + chr5_4:32709528-32709547 Msa0848320:five_prime_UTR 25.0%
!! ATCTCACTTATTTCTTTCAT+TGG + chr5_4:32709631-32709650 Msa0848320:five_prime_UTR 25.0%
! GGAAAAAGAATGAATGAAAA+TGG - chr5_4:32709756-32709775 None:intergenic 25.0%
! AATAGCTTTCTAAATCCAAA+TGG - chr5_4:32709853-32709872 None:intergenic 25.0%
! AAAAGAAACACAAAAAACAG+AGG - chr5_4:32709896-32709915 None:intergenic 25.0%
!!! GTGTTTCTTTTTAGTACTTT+TGG + chr5_4:32709905-32709924 Msa0848320:intron 25.0%
! TATACAATCAAAACTCAAAG+TGG + chr5_4:32709995-32710014 Msa0848320:intron 25.0%
! ATACAATCAAAACTCAAAGT+GGG + chr5_4:32709996-32710015 Msa0848320:intron 25.0%
!!! AGGATCTTTTTCAATAATCT+TGG - chr5_4:32710025-32710044 None:intergenic 25.0%
! AGAAATCAGAGAAAAAAGAA+AGG - chr5_4:32710045-32710064 None:intergenic 25.0%
! TAAAACTAATGAAGAAACAG+TGG - chr5_4:32710131-32710150 None:intergenic 25.0%
! ATTCAGAACTATGATACAAA+TGG - chr5_4:32710181-32710200 None:intergenic 25.0%
! CTATACACAAAAAAGGTAAA+GGG - chr5_4:32710299-32710318 None:intergenic 25.0%
! TATTATGTTCACATGACATT+GGG - chr5_4:32710410-32710429 None:intergenic 25.0%
! TTATTATGTTCACATGACAT+TGG - chr5_4:32710411-32710430 None:intergenic 25.0%
!! TTGTTTCTCTTTCCTTAAAT+TGG + chr5_4:32710625-32710644 Msa0848320:intron 25.0%
!!! GGTAATTGCAGTTTTAATTA+TGG + chr5_4:32710888-32710907 Msa0848320:intron 25.0%
! ACTGATTACTATGTTTACTA+TGG + chr5_4:32711076-32711095 Msa0848320:intron 25.0%
! TATGATTCATGATATGTTTG+TGG + chr5_4:32711116-32711135 Msa0848320:intron 25.0%
! AGTTAGTGGTATAAAAATCT+AGG + chr5_4:32711199-32711218 Msa0848320:five_prime_UTR 25.0%
! CATAGTGTAATTAATGCTTA+AGG - chr5_4:32712146-32712165 None:intergenic 25.0%
! TCACTTAACTCATTTATGTT+AGG + chr5_4:32712304-32712323 Msa0848320:intron 25.0%
!! AATTTTCATCCATTAACTGA+TGG + chr5_4:32712724-32712743 Msa0848320:intron 25.0%
!! ATTTTCATCCATTAACTGAT+GGG + chr5_4:32712725-32712744 Msa0848320:intron 25.0%
! AAAAGGATGACATATATGTA+TGG + chr5_4:32712955-32712974 Msa0848320:CDS 25.0%
!!! GATTTTTTGTACTTTTCCAT+TGG - chr5_4:32713104-32713123 None:intergenic 25.0%
!! ATGGAAAAGTACAAAAAATC+AGG + chr5_4:32713104-32713123 Msa0848320:CDS 25.0%
! AAACAAGATAAGAAATGTGA+TGG + chr5_4:32713283-32713302 Msa0848320:CDS 25.0%
!!! ATGAATGTTGTTTCATCTTA+TGG + chr5_4:32713365-32713384 Msa0848320:CDS 25.0%
! TTCATAAACACATAACCTTA+TGG - chr5_4:32713473-32713492 None:intergenic 25.0%
! ATAACGTATAACCTATAGAT+TGG - chr5_4:32713747-32713766 None:intergenic 25.0%
!! TATTTTCTTAAACTATCACG+AGG + chr5_4:32713764-32713783 Msa0848320:intron 25.0%
! TGTTATAAGATAAGTCTAAG+GGG + chr5_4:32713860-32713879 Msa0848320:intron 25.0%
! TATGCTATAAGTGCTTAATT+AGG + chr5_4:32714095-32714114 Msa0848320:intron 25.0%
!!! GCGTTTTGAAAATCTTATTT+AGG - chr5_4:32714139-32714158 None:intergenic 25.0%
! TGAAATGAAGTATGTAATGT+TGG + chr5_4:32714204-32714223 Msa0848320:CDS 25.0%
!! ATCAATCTTTTTGTTAAGAG+TGG - chr5_4:32714520-32714539 None:intergenic 25.0%
GTTGAAGATTGAACAAAAAG+AGG + chr5_4:32709527-32709546 Msa0848320:five_prime_UTR 30.0%
TGAAGATTGAACAAAAAGAG+GGG + chr5_4:32709529-32709548 Msa0848320:five_prime_UTR 30.0%
TTCTGTTGTGTGTTTATCAA+TGG - chr5_4:32709716-32709735 None:intergenic 30.0%
TACAATCAAAACTCAAAGTG+GGG + chr5_4:32709997-32710016 Msa0848320:intron 30.0%
GGTTATGATTTAGAAAACAG+AGG - chr5_4:32710074-32710093 None:intergenic 30.0%
!!! ATCATGAGTTTTTTTGTCAG+TGG - chr5_4:32710231-32710250 None:intergenic 30.0%
CCTATACACAAAAAAGGTAA+AGG - chr5_4:32710300-32710319 None:intergenic 30.0%
!!! CCTTTACCTTTTTTGTGTAT+AGG + chr5_4:32710297-32710316 Msa0848320:intron 30.0%
! AAAAAAGCATAATGTGAAGC+TGG - chr5_4:32710348-32710367 None:intergenic 30.0%
!!! TTTTTTTGTTGAGTCAGTGA+TGG + chr5_4:32710364-32710383 Msa0848320:intron 30.0%
!!! TTTCTCCCATGTTGTTTTAA+TGG + chr5_4:32710550-32710569 Msa0848320:intron 30.0%
GTTCTTTAGTACTATTTCCT+TGG + chr5_4:32710772-32710791 Msa0848320:intron 30.0%
CTTGATCTGAATTAACACTA+AGG - chr5_4:32710976-32710995 None:intergenic 30.0%
TACTATGTTTACTATGGTTG+AGG + chr5_4:32711082-32711101 Msa0848320:intron 30.0%
GTCTTTAAATCTGGAAACAA+TGG + chr5_4:32711333-32711352 Msa0848320:CDS 30.0%
TGAATCAAGTGATTTCTGAA+TGG - chr5_4:32711376-32711395 None:intergenic 30.0%
!!! TGTTGATTGAGTTTTGAGAA+TGG + chr5_4:32711567-32711586 Msa0848320:intron 30.0%
TACCTATAGACTTACTTTGT+TGG + chr5_4:32711619-32711638 Msa0848320:CDS 30.0%
TTCCAACAAAGTAAGTCTAT+AGG - chr5_4:32711624-32711643 None:intergenic 30.0%
CATTCTTTCCTCTCAAAAAT+CGG - chr5_4:32711659-32711678 None:intergenic 30.0%
TGGTACAGGTATGTAATATA+TGG + chr5_4:32711743-32711762 Msa0848320:intron 30.0%
GTGTTACATGAATAAATGAC+AGG + chr5_4:32711849-32711868 Msa0848320:intron 30.0%
! TGCTTGTTAATCCAATCATA+TGG - chr5_4:32711881-32711900 None:intergenic 30.0%
!! TAATCAGCATTGGTTGATAA+AGG + chr5_4:32711907-32711926 Msa0848320:CDS 30.0%
TAATTAATGCTTAAGGAGTG+TGG - chr5_4:32712139-32712158 None:intergenic 30.0%
TCAATTGTAACTAGATGTGT+CGG - chr5_4:32712202-32712221 None:intergenic 30.0%
AATTACCAAATTCTGTCCAT+GGG - chr5_4:32712523-32712542 None:intergenic 30.0%
TGAATATTCCCATCAGTTAA+TGG - chr5_4:32712736-32712755 None:intergenic 30.0%
! TCATATCTTATGCTTTTAGG+TGG + chr5_4:32712753-32712772 Msa0848320:intron 30.0%
TGACATATATGTATGGCAAA+AGG + chr5_4:32712962-32712981 Msa0848320:CDS 30.0%
ATGGATATGAATACAGCTTA+TGG + chr5_4:32713302-32713321 Msa0848320:CDS 30.0%
AGTTTCAAACATACCAATCA+TGG - chr5_4:32713439-32713458 None:intergenic 30.0%
! TTAGGTTGTTTATCCAAACT+TGG + chr5_4:32714113-32714132 Msa0848320:intron 30.0%
! AATCTTATTTAGGCCAAGTT+TGG - chr5_4:32714129-32714148 None:intergenic 30.0%
GAAGTATGTAATGTTGGAAA+TGG + chr5_4:32714210-32714229 Msa0848320:CDS 30.0%
TGTTGAGAAAGAGAAGATAT+TGG + chr5_4:32714354-32714373 Msa0848320:CDS 30.0%
! TTTGAAACTTGACTGATTCT+TGG - chr5_4:32714570-32714589 None:intergenic 30.0%
TGCATGGGATTAAATGTATA+AGG + chr5_4:32714678-32714697 Msa0848320:three_prime_UTR 30.0%
TCATATTCTATGCTTTCTGT+GGG - chr5_4:32714789-32714808 None:intergenic 30.0%
ATCATATTCTATGCTTTCTG+TGG - chr5_4:32714790-32714809 None:intergenic 30.0%
TGAAGAGATGGAAATGAAAG+TGG + chr5_4:32709498-32709517 Msa0848320:five_prime_UTR 35.0%
TGAGAAGAAGAAGAAGTGAA+AGG - chr5_4:32709659-32709678 None:intergenic 35.0%
! TGTTTATCAATGGTGGAATG+TGG - chr5_4:32709706-32709725 None:intergenic 35.0%
TGTTGTGTGTTTATCAATGG+TGG - chr5_4:32709713-32709732 None:intergenic 35.0%
ACACACAACAGAACAAAACA+AGG + chr5_4:32709723-32709742 Msa0848320:five_prime_UTR 35.0%
CACACAACAGAACAAAACAA+GGG + chr5_4:32709724-32709743 Msa0848320:five_prime_UTR 35.0%
CTTCTTCTAACAGATCCATT+TGG + chr5_4:32709835-32709854 Msa0848320:intron 35.0%
ACAAAAAACAGAGGAAACAG+GGG - chr5_4:32709887-32709906 None:intergenic 35.0%
CACAAAAAACAGAGGAAACA+GGG - chr5_4:32709888-32709907 None:intergenic 35.0%
ACACAAAAAACAGAGGAAAC+AGG - chr5_4:32709889-32709908 None:intergenic 35.0%
!!! TCTGGCTTTTCCATTCTAAT+TGG - chr5_4:32710095-32710114 None:intergenic 35.0%
!!! TCCCATGTTGTTTTAATGGT+CGG + chr5_4:32710554-32710573 Msa0848320:intron 35.0%
ACCGACCATTAAAACAACAT+GGG - chr5_4:32710558-32710577 None:intergenic 35.0%
!!! GTGTGGTTTTATTCATTAGC+TGG + chr5_4:32710576-32710595 Msa0848320:intron 35.0%
CCAATGACAGATCCAATTTA+AGG - chr5_4:32710640-32710659 None:intergenic 35.0%
CCTTAAATTGGATCTGTCAT+TGG + chr5_4:32710637-32710656 Msa0848320:intron 35.0%
TTATGTCTGTCACATTGATC+TGG + chr5_4:32710668-32710687 Msa0848320:intron 35.0%
GTACTAAAGAACAGCAACAA+AGG - chr5_4:32710764-32710783 None:intergenic 35.0%
! TTATTATAGTCTTACCCTCG+TGG + chr5_4:32710820-32710839 Msa0848320:five_prime_UTR 35.0%
GATTCATGATATGTTTGTGG+TGG + chr5_4:32711119-32711138 Msa0848320:intron 35.0%
! CTTTTTGTGCAGATAGTTAG+TGG + chr5_4:32711185-32711204 Msa0848320:intron 35.0%
! ATCTAGGATCATGAAGCATA+AGG + chr5_4:32711215-32711234 Msa0848320:exon 35.0%
ATCACTATCATTGTTCTGTG+TGG + chr5_4:32711288-32711307 Msa0848320:CDS 35.0%
! TGTGGTTTTTCATTCTACCT+TGG + chr5_4:32711306-32711325 Msa0848320:CDS 35.0%
!! CTTAATTTGCAAAGAACCTG+AGG - chr5_4:32711409-32711428 None:intergenic 35.0%
GATAATCATTGCTGCATTCA+GGG - chr5_4:32711443-32711462 None:intergenic 35.0%
TGATAATCATTGCTGCATTC+AGG - chr5_4:32711444-32711463 None:intergenic 35.0%
AATGGATGATTTCACAGAGA+TGG + chr5_4:32711585-32711604 Msa0848320:intron 35.0%
CAACATTCATCTCTACTCTT+TGG - chr5_4:32711725-32711744 None:intergenic 35.0%
CAAAGAGTAGAGATGAATGT+TGG + chr5_4:32711723-32711742 Msa0848320:CDS 35.0%
GGAGAGAAATTTCAATTTCC+TGG + chr5_4:32711932-32711951 Msa0848320:CDS 35.0%
GAGAAATTTCAATTTCCTGG+TGG + chr5_4:32711935-32711954 Msa0848320:CDS 35.0%
AAATTTCAATTTCCTGGTGG+AGG + chr5_4:32711938-32711957 Msa0848320:CDS 35.0%
ACTATGTTTCCTAATGGTGT+TGG + chr5_4:32711962-32711981 Msa0848320:CDS 35.0%
ACATATTCACCAACACCATT+AGG - chr5_4:32711974-32711993 None:intergenic 35.0%
! ATTTATGTTAGGTTGCTAGC+TGG + chr5_4:32712315-32712334 Msa0848320:intron 35.0%
! TTTATGTTAGGTTGCTAGCT+GGG + chr5_4:32712316-32712335 Msa0848320:intron 35.0%
CCATATCAAAGGAGTTTGAA+GGG - chr5_4:32712478-32712497 None:intergenic 35.0%
GAATTACCAAATTCTGTCCA+TGG - chr5_4:32712524-32712543 None:intergenic 35.0%
! GAAGAATTCGGTGAATTTCT+TGG - chr5_4:32712788-32712807 None:intergenic 35.0%
TGAACAAGTGAAATCCTTTC+AGG - chr5_4:32713173-32713192 None:intergenic 35.0%
GAAAGGATTTCACTTGTTCA+AGG + chr5_4:32713173-32713192 Msa0848320:CDS 35.0%
TCAGTCATGATAACAGTAAG+TGG + chr5_4:32713213-32713232 Msa0848320:CDS 35.0%
! TTCTTATCTTGTTTGTGCCA+AGG - chr5_4:32713277-32713296 None:intergenic 35.0%
GATATGAATACAGCTTATGG+TGG + chr5_4:32713305-32713324 Msa0848320:CDS 35.0%
CTTGATCAATGATCCTTTGT+GGG + chr5_4:32713340-32713359 Msa0848320:CDS 35.0%
ACAACATTCATAACCCACAA+AGG - chr5_4:32713356-32713375 None:intergenic 35.0%
! AAAACTACAGGGAGTGTATT+AGG - chr5_4:32713392-32713411 None:intergenic 35.0%
TCAAACATACCAATCATGGA+AGG - chr5_4:32713435-32713454 None:intergenic 35.0%
! TCATGATGACTTGTGCTATT+AGG + chr5_4:32713540-32713559 Msa0848320:intron 35.0%
GTCAAACTGTTCCAATCTAT+AGG + chr5_4:32713733-32713752 Msa0848320:intron 35.0%
ATGTAATGTTGGAAATGGAC+CGG + chr5_4:32714215-32714234 Msa0848320:CDS 35.0%
AAACTTATGAAACTGTGCAG+CGG + chr5_4:32714425-32714444 Msa0848320:three_prime_UTR 35.0%
TTCCAGAAGTAGAGAAACAA+AGG + chr5_4:32714479-32714498 Msa0848320:three_prime_UTR 35.0%
TCCAGAAGTAGAGAAACAAA+GGG + chr5_4:32714480-32714499 Msa0848320:three_prime_UTR 35.0%
GAAACAAAGGGAAACGAATT+CGG + chr5_4:32714492-32714511 Msa0848320:three_prime_UTR 35.0%
GAGATGGAAATGAAAGTGGA+AGG + chr5_4:32709502-32709521 Msa0848320:five_prime_UTR 40.0%
TGTGTGTGAGGCTAAACTAA+AGG - chr5_4:32709606-32709625 None:intergenic 40.0%
! GTGAGATTTGTTTGTGTGTG+AGG - chr5_4:32709618-32709637 None:intergenic 40.0%
ATGTGGAAAAAACAGGGGAA+TGG - chr5_4:32709689-32709708 None:intergenic 40.0%
GTGGAATGTGGAAAAAACAG+GGG - chr5_4:32709694-32709713 None:intergenic 40.0%
GGTGGAATGTGGAAAAAACA+GGG - chr5_4:32709695-32709714 None:intergenic 40.0%
TGGTGGAATGTGGAAAAAAC+AGG - chr5_4:32709696-32709715 None:intergenic 40.0%
!! AGTGGCAATGCTTTTTGTTC+TGG - chr5_4:32710113-32710132 None:intergenic 40.0%
! TTTTGTTGAGTCAGTGATGG+AGG + chr5_4:32710367-32710386 Msa0848320:intron 40.0%
ATGGAGGCTATGTCCTAAAT+GGG + chr5_4:32710383-32710402 Msa0848320:intron 40.0%
GACATCAAATGTCAAGTAGC+TGG + chr5_4:32710443-32710462 Msa0848320:intron 40.0%
TGGGAGAAAGTGAGAAAGTA+AGG - chr5_4:32710539-32710558 None:intergenic 40.0%
CACCGACCATTAAAACAACA+TGG - chr5_4:32710559-32710578 None:intergenic 40.0%
!!! TGTTGTTTTAATGGTCGGTG+TGG + chr5_4:32710559-32710578 Msa0848320:intron 40.0%
TCTGTCACATTGATCTGGTT+GGG + chr5_4:32710673-32710692 Msa0848320:intron 40.0%
CTAAAGAACAGCAACAAAGG+AGG - chr5_4:32710761-32710780 None:intergenic 40.0%
!! CTATTTCCTTGGTTCTACGT+TGG + chr5_4:32710783-32710802 Msa0848320:five_prime_UTR 40.0%
TGTCGAATTGCGATTAATCG+CGG + chr5_4:32710866-32710885 Msa0848320:five_prime_UTR 40.0%
! TGATATGTTTGTGGTGGAAG+TGG + chr5_4:32711125-32711144 Msa0848320:intron 40.0%
AGGATCATGAAGCATAAGGA+TGG + chr5_4:32711219-32711238 Msa0848320:exon 40.0%
! GGTTTTTCATTCTACCTTGG+TGG + chr5_4:32711309-32711328 Msa0848320:CDS 40.0%
CAGATTTAAAGACTCCACCA+AGG - chr5_4:32711326-32711345 None:intergenic 40.0%
CTTGGTGGAGTCTTTAAATC+TGG + chr5_4:32711324-32711343 Msa0848320:CDS 40.0%
AAAGAACCTGAGGATTGCTT+AGG - chr5_4:32711399-32711418 None:intergenic 40.0%
CTGCATTCAGGGAAACTAAA+GGG - chr5_4:32711432-32711451 None:intergenic 40.0%
AATACCTTTGGATCTGTGCA+TGG - chr5_4:32711477-32711496 None:intergenic 40.0%
TCACAGAGATGGAGAAAGTA+CGG + chr5_4:32711596-32711615 Msa0848320:intron 40.0%
CTTTCCTCTCAAAAATCGGA+GGG - chr5_4:32711655-32711674 None:intergenic 40.0%
TCTTTCCTCTCAAAAATCGG+AGG - chr5_4:32711656-32711675 None:intergenic 40.0%
GTAGAGATGAATGTTGGTAC+AGG + chr5_4:32711729-32711748 Msa0848320:CDS 40.0%
ACAGGAATGTGCCATATGAT+TGG + chr5_4:32711867-32711886 Msa0848320:intron 40.0%
AGCAGAAGTCTAATCAGCAT+TGG + chr5_4:32711897-32711916 Msa0848320:CDS 40.0%
!! CAGCATTGGTTGATAAAGGA+AGG + chr5_4:32711911-32711930 Msa0848320:CDS 40.0%
!! GGAGGTACTATGTTTCCTAA+TGG + chr5_4:32711956-32711975 Msa0848320:CDS 40.0%
TTAATGCAAGATCTGATCCC+AGG + chr5_4:32711998-32712017 Msa0848320:CDS 40.0%
TGATCCCAGGAATCAAAGAT+GGG + chr5_4:32712011-32712030 Msa0848320:CDS 40.0%
GTCAGAACTGCAATTGATAC+TGG + chr5_4:32712037-32712056 Msa0848320:CDS 40.0%
! ACTGCAATTGATACTGGTTG+TGG + chr5_4:32712043-32712062 Msa0848320:CDS 40.0%
! CTGCAATTGATACTGGTTGT+GGG + chr5_4:32712044-32712063 Msa0848320:CDS 40.0%
! TGCAATTGATACTGGTTGTG+GGG + chr5_4:32712045-32712064 Msa0848320:CDS 40.0%
GTTAGTGTCAGTGTTGTGTA+TGG + chr5_4:32712262-32712281 Msa0848320:intron 40.0%
! TTATGTTAGGTTGCTAGCTG+GGG + chr5_4:32712317-32712336 Msa0848320:intron 40.0%
TGAGCTTCATGGTTATCTCT+TGG - chr5_4:32712386-32712405 None:intergenic 40.0%
AAGAGATAACCATGAAGCTC+AGG + chr5_4:32712385-32712404 Msa0848320:CDS 40.0%
CAAATTGAACCTGAGCTTCA+TGG - chr5_4:32712397-32712416 None:intergenic 40.0%
AGATGACACCAAGAATTGCT+GGG - chr5_4:32712436-32712455 None:intergenic 40.0%
TCAAAGGAGTTTGAAGGGAA+AGG - chr5_4:32712473-32712492 None:intergenic 40.0%
CCCTTCAAACTCCTTTGATA+TGG + chr5_4:32712475-32712494 Msa0848320:CDS 40.0%
GCCATATCAAAGGAGTTTGA+AGG - chr5_4:32712479-32712498 None:intergenic 40.0%
AGAGCAATGAGCCATATCAA+AGG - chr5_4:32712489-32712508 None:intergenic 40.0%
CAAATTCTGTCCATGGGATA+AGG - chr5_4:32712517-32712536 None:intergenic 40.0%
CTTATCCCATGGACAGAATT+TGG + chr5_4:32712515-32712534 Msa0848320:CDS 40.0%
! ATCATAGCAAGCGTTGTCTT+TGG - chr5_4:32712988-32713007 None:intergenic 40.0%
!! TTCAACCTTTGAGGCCATTT+CGG - chr5_4:32713143-32713162 None:intergenic 40.0%
CCACAAAGGATCATTGATCA+AGG - chr5_4:32713342-32713361 None:intergenic 40.0%
CCTTGATCAATGATCCTTTG+TGG + chr5_4:32713339-32713358 Msa0848320:CDS 40.0%
!! AATCATGGAAGGTACCGATA+AGG - chr5_4:32713424-32713443 None:intergenic 40.0%
TTATCGGTACCTTCCATGAT+TGG + chr5_4:32713423-32713442 Msa0848320:CDS 40.0%
TGAAGTAGGTCATAGGTTCT+AGG - chr5_4:32713587-32713606 None:intergenic 40.0%
ATCAGCATGAAGTAGGTCAT+AGG - chr5_4:32713594-32713613 None:intergenic 40.0%
TATGACCTACTTCATGCTGA+TGG + chr5_4:32713593-32713612 Msa0848320:CDS 40.0%
AGAATCCATCAGCATGAAGT+AGG - chr5_4:32713601-32713620 None:intergenic 40.0%
GCTTGTTTGAGCTTATCTAC+TGG + chr5_4:32713895-32713914 Msa0848320:intron 40.0%
TTGTCATCTTGATCCTGAGT+TGG - chr5_4:32714407-32714426 None:intergenic 40.0%
! TCCCTTTGTTTCTCTACTTC+TGG - chr5_4:32714484-32714503 None:intergenic 40.0%
AACAAAAAGAGGGGACAGCA+AGG + chr5_4:32709538-32709557 Msa0848320:five_prime_UTR 45.0%
TGGAAAAAACAGGGGAATGG+TGG - chr5_4:32709686-32709705 None:intergenic 45.0%
GATGGAGGCTATGTCCTAAA+TGG + chr5_4:32710382-32710401 Msa0848320:intron 45.0%
CATGACATTGGGACCCATTT+AGG - chr5_4:32710399-32710418 None:intergenic 45.0%
GTCTGTCACATTGATCTGGT+TGG + chr5_4:32710672-32710691 Msa0848320:intron 45.0%
CTGTCACATTGATCTGGTTG+GGG + chr5_4:32710674-32710693 Msa0848320:intron 45.0%
GTCGAATTGCGATTAATCGC+GGG + chr5_4:32710867-32710886 Msa0848320:five_prime_UTR 45.0%
! GTCAGAGATCGGTTCTTGTT+CGG - chr5_4:32711261-32711280 None:intergenic 45.0%
GATTCACCTAAGCAATCCTC+AGG + chr5_4:32711390-32711409 Msa0848320:CDS 45.0%
GCTGCATTCAGGGAAACTAA+AGG - chr5_4:32711433-32711452 None:intergenic 45.0%
TACTCCATGCACAGATCCAA+AGG + chr5_4:32711470-32711489 Msa0848320:CDS 45.0%
TCTCAAAAATCGGAGGGCAA+TGG - chr5_4:32711649-32711668 None:intergenic 45.0%
!! ATTGCCCTCCGATTTTTGAG+AGG + chr5_4:32711648-32711667 Msa0848320:CDS 45.0%
GTTACAAGCCTCCAATCAGA+TGG + chr5_4:32711699-32711718 Msa0848320:CDS 45.0%
CTACTCTTTGGCCATCTGAT+TGG - chr5_4:32711713-32711732 None:intergenic 45.0%
CTGATCCCAGGAATCAAAGA+TGG + chr5_4:32712010-32712029 Msa0848320:CDS 45.0%
CTGACCCATCTTTGATTCCT+GGG - chr5_4:32712018-32712037 None:intergenic 45.0%
ACTGACCCATCTTTGATTCC+TGG - chr5_4:32712019-32712038 None:intergenic 45.0%
AGCAGTGATACTTGCGTGTT+TGG + chr5_4:32712167-32712186 Msa0848320:intron 45.0%
! GTTCAATTTGCTCTTGAGCG+TGG + chr5_4:32712407-32712426 Msa0848320:CDS 45.0%
GAGATGACACCAAGAATTGC+TGG - chr5_4:32712437-32712456 None:intergenic 45.0%
ATTCACCGAATTCTTCGTCC+CGG + chr5_4:32712792-32712811 Msa0848320:CDS 45.0%
GACAAAACCCAAAATCCTCC+GGG - chr5_4:32712813-32712832 None:intergenic 45.0%
GGACAAAACCCAAAATCCTC+CGG - chr5_4:32712814-32712833 None:intergenic 45.0%
!!! GGAGGATTTTGGGTTTTGTC+CGG + chr5_4:32712813-32712832 Msa0848320:CDS 45.0%
AACGGTGGAAGAGCAAAGAT+CGG + chr5_4:32712878-32712897 Msa0848320:CDS 45.0%
TTTGGAGGATAGGTGTCTCT+AGG - chr5_4:32713017-32713036 None:intergenic 45.0%
!! GTCGTCACATTTTGGAGGAT+AGG - chr5_4:32713027-32713046 None:intergenic 45.0%
! AGACTGTCGTCACATTTTGG+AGG - chr5_4:32713032-32713051 None:intergenic 45.0%
! TCGAGACTGTCGTCACATTT+TGG - chr5_4:32713035-32713054 None:intergenic 45.0%
CGCTTGTTTCGTTGTTCCAA+TGG + chr5_4:32713085-32713104 Msa0848320:CDS 45.0%
GGTGCAACATTCAACCTTTG+AGG - chr5_4:32713152-32713171 None:intergenic 45.0%
GGTTGAATGTTGCACCTGAA+AGG + chr5_4:32713156-32713175 Msa0848320:CDS 45.0%
AAGAAGTTGTTGCCTGACCT+TGG + chr5_4:32713257-32713276 Msa0848320:CDS 45.0%
! ATCTTGTTTGTGCCAAGGTC+AGG - chr5_4:32713272-32713291 None:intergenic 45.0%
!! GTTTTCGATCGAGGCCTTAT+CGG + chr5_4:32713407-32713426 Msa0848320:CDS 45.0%
ACTGAGTGCATATTCACCTG+TGG - chr5_4:32713637-32713656 None:intergenic 45.0%
GATAAGTCTAAGGGGCTGTT+TGG + chr5_4:32713868-32713887 Msa0848320:intron 45.0%
CCGCAAAATAACTCGACTCT+CGG - chr5_4:32714270-32714289 None:intergenic 45.0%
!! CCGAGAGTCGAGTTATTTTG+CGG + chr5_4:32714267-32714286 Msa0848320:CDS 45.0%
TGCGGATGCCATTACAACTA+TGG + chr5_4:32714285-32714304 Msa0848320:CDS 45.0%
TGCCATTACAACTATGGCGA+AGG + chr5_4:32714291-32714310 Msa0848320:CDS 45.0%
GCCATTACAACTATGGCGAA+GGG + chr5_4:32714292-32714311 Msa0848320:CDS 45.0%
TCCCTTCGCCATAGTTGTAA+TGG - chr5_4:32714296-32714315 None:intergenic 45.0%
TGGTATGCCAGAAAAAGCTG+TGG + chr5_4:32714374-32714393 Msa0848320:CDS 45.0%
! CATCTTGATCCTGAGTTGGA+TGG - chr5_4:32714403-32714422 None:intergenic 45.0%
!!! ATTGTTTTTTAAATAATTAT+TGG + chr5_4:32712230-32712249 Msa0848320:intron 5.0%
CTCAGACCAACGTAGAACCA+AGG - chr5_4:32710792-32710811 None:intergenic 50.0%
CAAGAACCGATCTCTGACTG+CGG + chr5_4:32711263-32711282 Msa0848320:CDS 50.0%
ATTGGAGGCTTGTAACCAGG+AGG - chr5_4:32711695-32711714 None:intergenic 50.0%
CTGATTGGAGGCTTGTAACC+AGG - chr5_4:32711698-32711717 None:intergenic 50.0%
CTCTTTGGCCATCTGATTGG+AGG - chr5_4:32711710-32711729 None:intergenic 50.0%
GGAAACATAGTACCTCCACC+AGG - chr5_4:32711953-32711972 None:intergenic 50.0%
CGTGGTATCCCAGCAATTCT+TGG + chr5_4:32712425-32712444 Msa0848320:CDS 50.0%
! GCTCTAGATGCCTTATCCCA+TGG + chr5_4:32712504-32712523 Msa0848320:CDS 50.0%
ATCCTCCGGGACGAAGAATT+CGG - chr5_4:32712800-32712819 None:intergenic 50.0%
! TTCTTCGTCCCGGAGGATTT+TGG + chr5_4:32712802-32712821 Msa0848320:CDS 50.0%
! TCTTCGTCCCGGAGGATTTT+GGG + chr5_4:32712803-32712822 Msa0848320:CDS 50.0%
! CTCATAGTTGACTGGTGGAC+CGG - chr5_4:32712835-32712854 None:intergenic 50.0%
CTACGCTCATAGTTGACTGG+TGG - chr5_4:32712840-32712859 None:intergenic 50.0%
CACCAGTCAACTATGAGCGT+AGG + chr5_4:32712838-32712857 Msa0848320:CDS 50.0%
CACCTACGCTCATAGTTGAC+TGG - chr5_4:32712843-32712862 None:intergenic 50.0%
CAGTCAACTATGAGCGTAGG+TGG + chr5_4:32712841-32712860 Msa0848320:CDS 50.0%
GTCTCGAACCAGATTCAGCA+TGG + chr5_4:32713048-32713067 Msa0848320:CDS 50.0%
GGAGTGTACCATGCTGAATC+TGG - chr5_4:32713059-32713078 None:intergenic 50.0%
ACAACGAAACAAGCGCGAAG+CGG - chr5_4:32713080-32713099 None:intergenic 50.0%
TCATGCCGAAATGGCCTCAA+AGG + chr5_4:32713135-32713154 Msa0848320:CDS 50.0%
! CTCCCTGTAGTTTTCGATCG+AGG + chr5_4:32713398-32713417 Msa0848320:CDS 50.0%
GGCCTCGATCGAAAACTACA+GGG - chr5_4:32713403-32713422 None:intergenic 50.0%
AGGCCTCGATCGAAAACTAC+AGG - chr5_4:32713404-32713423 None:intergenic 50.0%
TCTTCACTGCTGAAAGCCAC+AGG + chr5_4:32713618-32713637 Msa0848320:CDS 50.0%
CTATGGCGAAGGGAATGAGA+TGG + chr5_4:32714302-32714321 Msa0848320:CDS 50.0%
!! ATGGCTGCCACAGCTTTTTC+TGG - chr5_4:32714384-32714403 None:intergenic 50.0%
TGTGCAGCGGTAAGAAAGAG+CGG + chr5_4:32714438-32714457 Msa0848320:three_prime_UTR 50.0%
! ATCGGTTCTTGTTCGGCTGG+TGG - chr5_4:32711254-32711273 None:intergenic 55.0%
! GAGATCGGTTCTTGTTCGGC+TGG - chr5_4:32711257-32711276 None:intergenic 55.0%
TGATCGCCGCAGTCAGAGAT+CGG - chr5_4:32711272-32711291 None:intergenic 55.0%
TGCTTAGTTCCTCCTCCTCC+TGG + chr5_4:32711677-32711696 Msa0848320:CDS 55.0%
! TGTTAGGTTGCTAGCTGGGG+TGG + chr5_4:32712320-32712339 Msa0848320:intron 55.0%
! TAGCTGGGGTGGTGACTTGT+TGG + chr5_4:32712331-32712350 Msa0848320:CDS 55.0%
!! GGTGGTGACTTGTTGGATCG+CGG + chr5_4:32712338-32712357 Msa0848320:CDS 55.0%
AACTATGAGCGTAGGTGGCG+CGG + chr5_4:32712846-32712865 Msa0848320:CDS 55.0%
GCCTCACGTTCATGCCGAAA+TGG + chr5_4:32713126-32713145 Msa0848320:CDS 55.0%
GCCATTTCGGCATGAACGTG+AGG - chr5_4:32713130-32713149 None:intergenic 55.0%
! ATGGACCGGATTTTGCGACC+AGG + chr5_4:32714229-32714248 Msa0848320:CDS 55.0%
AGAGGGGACAGCAAGGCACA+TGG + chr5_4:32709545-32709564 Msa0848320:five_prime_UTR 60.0%
GGCTTGTAACCAGGAGGAGG+AGG - chr5_4:32711689-32711708 None:intergenic 60.0%
GGAGGCTTGTAACCAGGAGG+AGG - chr5_4:32711692-32711711 None:intergenic 60.0%
CACCGAATTCTTCGTCCCGG+AGG + chr5_4:32712795-32712814 Msa0848320:CDS 60.0%
GTGGCGCGGATGGAACACAA+CGG + chr5_4:32712860-32712879 Msa0848320:CDS 60.0%
! GACCGGATTTTGCGACCAGG+CGG + chr5_4:32714232-32714251 Msa0848320:CDS 60.0%
! ACCGGATTTTGCGACCAGGC+GGG + chr5_4:32714233-32714252 Msa0848320:CDS 60.0%
CTGTGGCAGCCATCCAACTC+AGG + chr5_4:32714391-32714410 Msa0848320:CDS 60.0%
AGATCGCAGCGCAGCCACGA+GGG - chr5_4:32710837-32710856 None:intergenic 65.0%
AAGATCGCAGCGCAGCCACG+AGG - chr5_4:32710838-32710857 None:intergenic 65.0%
ATGAGCGTAGGTGGCGCGGA+TGG + chr5_4:32712850-32712869 Msa0848320:CDS 65.0%
GCGCGGATGGAACACAACGG+TGG + chr5_4:32712863-32712882 Msa0848320:CDS 65.0%
GCCCGCCTGGTCGCAAAATC+CGG - chr5_4:32714237-32714256 None:intergenic 65.0%
CGGATTATAGCGTGCCCGCC+TGG - chr5_4:32714250-32714269 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 32709452 32714873 32709452 ID=Msa0848320;Name=Msa0848320
chr5_4 mRNA 32709452 32714873 32709452 ID=Msa0848320-mRNA-1;Parent=Msa0848320;Name=Msa0848320-mRNA-1;_AED=0.15;_eAED=0.15;_QI=430|1|1|1|0.75|0.66|9|450|598
chr5_4 exon 32709452 32709745 32709452 ID=Msa0848320-mRNA-1:exon:11423;Parent=Msa0848320-mRNA-1
chr5_4 exon 32710781 32710888 32710781 ID=Msa0848320-mRNA-1:exon:11424;Parent=Msa0848320-mRNA-1
chr5_4 exon 32711197 32711491 32711197 ID=Msa0848320-mRNA-1:exon:11425;Parent=Msa0848320-mRNA-1
chr5_4 exon 32711602 32711750 32711602 ID=Msa0848320-mRNA-1:exon:11426;Parent=Msa0848320-mRNA-1
chr5_4 exon 32711871 32712066 32711871 ID=Msa0848320-mRNA-1:exon:11427;Parent=Msa0848320-mRNA-1
chr5_4 exon 32712326 32712536 32712326 ID=Msa0848320-mRNA-1:exon:11428;Parent=Msa0848320-mRNA-1
chr5_4 exon 32712772 32713444 32712772 ID=Msa0848320-mRNA-1:exon:11429;Parent=Msa0848320-mRNA-1
chr5_4 exon 32713562 32713639 32713562 ID=Msa0848320-mRNA-1:exon:11430;Parent=Msa0848320-mRNA-1
chr5_4 exon 32714201 32714873 32714201 ID=Msa0848320-mRNA-1:exon:11431;Parent=Msa0848320-mRNA-1
chr5_4 five_prime_UTR 32709452 32709745 32709452 ID=Msa0848320-mRNA-1:five_prime_utr;Parent=Msa0848320-mRNA-1
chr5_4 five_prime_UTR 32710781 32710888 32710781 ID=Msa0848320-mRNA-1:five_prime_utr;Parent=Msa0848320-mRNA-1
chr5_4 five_prime_UTR 32711197 32711224 32711197 ID=Msa0848320-mRNA-1:five_prime_utr;Parent=Msa0848320-mRNA-1
chr5_4 CDS 32711225 32711491 32711225 ID=Msa0848320-mRNA-1:cds;Parent=Msa0848320-mRNA-1
chr5_4 CDS 32711602 32711750 32711602 ID=Msa0848320-mRNA-1:cds;Parent=Msa0848320-mRNA-1
chr5_4 CDS 32711871 32712066 32711871 ID=Msa0848320-mRNA-1:cds;Parent=Msa0848320-mRNA-1
chr5_4 CDS 32712326 32712536 32712326 ID=Msa0848320-mRNA-1:cds;Parent=Msa0848320-mRNA-1
chr5_4 CDS 32712772 32713444 32712772 ID=Msa0848320-mRNA-1:cds;Parent=Msa0848320-mRNA-1
chr5_4 CDS 32713562 32713639 32713562 ID=Msa0848320-mRNA-1:cds;Parent=Msa0848320-mRNA-1
chr5_4 CDS 32714201 32714423 32714201 ID=Msa0848320-mRNA-1:cds;Parent=Msa0848320-mRNA-1
chr5_4 three_prime_UTR 32714424 32714873 32714424 ID=Msa0848320-mRNA-1:three_prime_utr;Parent=Msa0848320-mRNA-1
Gene Sequence

>Msa0848320

ATGAAGCATAAGGATGGAAAACTGATCCACCAGCCGAACAAGAACCGATCTCTGACTGCGGCGATCACTATCATTGTTCTGTGTGGTTTTTCATTCTACCTTGGTGGAGTCTTTAAATCTGGAAACAATGGTGTTGATGTCATCAACACCATTCAGAAATCACTTGATTCACCTAAGCAATCCTCAGGTTCTTTGCAAATTAAGCCCTTTAGTTTCCCTGAATGCAGCAATGATTATCAAGACTATACTCCATGCACAGATCCAAAGAGATGGAGAAAGTACGGTACCTATAGACTTACTTTGTTGGAACGCCATTGCCCTCCGATTTTTGAGAGGAAAGAATGCTTAGTTCCTCCTCCTCCTGGTTACAAGCCTCCAATCAGATGGCCAAAGAGTAGAGATGAATGTTGGTACAGGAATGTGCCATATGATTGGATTAACAAGCAGAAGTCTAATCAGCATTGGTTGATAAAGGAAGGAGAGAAATTTCAATTTCCTGGTGGAGGTACTATGTTTCCTAATGGTGTTGGTGAATATGTTGATTTAATGCAAGATCTGATCCCAGGAATCAAAGATGGGTCAGTCAGAACTGCAATTGATACTGGTTGTGGGGTTGCTAGCTGGGGTGGTGACTTGTTGGATCGCGGCGTTCTAACAATTTCTCTCGCGCCAAGAGATAACCATGAAGCTCAGGTTCAATTTGCTCTTGAGCGTGGTATCCCAGCAATTCTTGGTGTCATCTCTACACAAAGACTTCCTTTCCCTTCAAACTCCTTTGATATGGCTCATTGCTCTAGATGCCTTATCCCATGGACAGAATTTGGTGGAATTTATCTCCAAGAAATTCACCGAATTCTTCGTCCCGGAGGATTTTGGGTTTTGTCCGGTCCACCAGTCAACTATGAGCGTAGGTGGCGCGGATGGAACACAACGGTGGAAGAGCAAAGATCGGATTATGAAAAGCTACAAGATTTGCTCACATCAATGTGCTTCAAATTATACAACAAAAAGGATGACATATATGTATGGCAAAAGGCCAAAGACAACGCTTGCTATGATAAGCTTCCTAGAGACACCTATCCTCCAAAATGTGACGACAGTCTCGAACCAGATTCAGCATGGTACACTCCGCTTCGCGCTTGTTTCGTTGTTCCAATGGAAAAGTACAAAAAATCAGGCCTCACGTTCATGCCGAAATGGCCTCAAAGGTTGAATGTTGCACCTGAAAGGATTTCACTTGTTCAAGGTTCTAGTTCTAGTACTTTCAGTCATGATAACAGTAAGTGGAAAAAGCGCATTCAGCACTACAAGAAGTTGTTGCCTGACCTTGGCACAAACAAGATAAGAAATGTGATGGATATGAATACAGCTTATGGTGGTTTCGCTGCTTCCTTGATCAATGATCCTTTGTGGGTTATGAATGTTGTTTCATCTTATGGTCCTAATACACTCCCTGTAGTTTTCGATCGAGGCCTTATCGGTACCTTCCATGATTGGTGTGAAGCTTTTTCAACATATCCTAGAACCTATGACCTACTTCATGCTGATGGATTCTTCACTGCTGAAAGCCACAGATGTGAAATGAAGTATGTAATGTTGGAAATGGACCGGATTTTGCGACCAGGCGGGCACGCTATAATCCGAGAGTCGAGTTATTTTGCGGATGCCATTACAACTATGGCGAAGGGAATGAGATGGATATGTCACAAAGAAAACACTGAGTTTGATGTTGAGAAAGAGAAGATATTGGTATGCCAGAAAAAGCTGTGGCAGCCATCCAACTCAGGATCAAGATGA
Protein sequence

>Msa0848320

MKHKDGKLIHQPNKNRSLTAAITIIVLCGFSFYLGGVFKSGNNGVDVINTIQKSLDSPKQSSGSLQIKPFSFPECSNDYQDYTPCTDPKRWRKYGTYRLTLLERHCPPIFERKECLVPPPPGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLIKEGEKFQFPGGGTMFPNGVGEYVDLMQDLIPGIKDGSVRTAIDTGCGVASWGGDLLDRGVLTISLAPRDNHEAQVQFALERGIPAILGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLQEIHRILRPGGFWVLSGPPVNYERRWRGWNTTVEEQRSDYEKLQDLLTSMCFKLYNKKDDIYVWQKAKDNACYDKLPRDTYPPKCDDSLEPDSAWYTPLRACFVVPMEKYKKSGLTFMPKWPQRLNVAPERISLVQGSSSSTFSHDNSKWKKRIQHYKKLLPDLGTNKIRNVMDMNTAYGGFAASLINDPLWVMNVVSSYGPNTLPVVFDRGLIGTFHDWCEAFSTYPRTYDLLHADGFFTAESHRCEMKYVMLEMDRILRPGGHAIIRESSYFADAITTMAKGMRWICHKENTEFDVEKEKILVCQKKLWQPSNSGSR*