Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529350 | XP_003605139.1 | 97.126 | 522 | 13 | 1 | 1 | 520 | 1 | 522 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529350 | sp|P11043|AROA_PETHY | 77.230 | 527 | 99 | 6 | 4 | 520 | 1 | 516 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529350 | G7JEN4 | 97.126 | 522 | 13 | 1 | 1 | 520 | 1 | 522 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035120 | Msa0529350 | 0.804802 | 1.813519e-49 | -8.615850e-47 |
| Msa0106620 | Msa0529350 | 0.816608 | 5.065954e-52 | -8.615850e-47 |
| Msa0106710 | Msa0529350 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa0450400 | Msa0529350 | -0.807083 | 6.011403e-50 | -8.615850e-47 |
| Msa0241830 | Msa0529350 | 0.815231 | 1.027611e-51 | -8.615850e-47 |
| Msa0279850 | Msa0529350 | 0.824049 | 9.963303e-54 | -8.615850e-47 |
| Msa0322900 | Msa0529350 | 0.829919 | 3.931190e-55 | -8.615850e-47 |
| Msa0485240 | Msa0529350 | 0.800259 | 1.567413e-48 | -8.615850e-47 |
| Msa0518030 | Msa0529350 | 0.800295 | 1.540813e-48 | -8.615850e-47 |
| Msa0529350 | Msa0549890 | 0.820629 | 6.199771e-53 | -8.615850e-47 |
| Msa0529350 | Msa0556010 | 0.804115 | 2.521540e-49 | -8.615850e-47 |
| Msa0529350 | Msa0581690 | 0.814430 | 1.546629e-51 | -8.615850e-47 |
| Msa0529350 | Msa0618470 | 0.817471 | 3.242161e-52 | -8.615850e-47 |
| Msa0529350 | Msa0624940 | 0.955778 | 1.381652e-113 | -8.615850e-47 |
| Msa0529350 | Msa0626460 | 0.816735 | 4.744022e-52 | -8.615850e-47 |
| Msa0529350 | Msa0663270 | 0.811507 | 6.764289e-51 | -8.615850e-47 |
| Msa0529350 | Msa0664540 | 0.835322 | 1.794917e-56 | -8.615850e-47 |
| Msa0529350 | Msa0671410 | 0.850834 | 1.314298e-60 | -8.615850e-47 |
| Msa0529350 | Msa0848320 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
| Msa0529350 | Msa1006810 | 0.801815 | 7.536715e-49 | -8.615850e-47 |
| Msa0529350 | Msa1290680 | 0.813813 | 2.116124e-51 | -8.615850e-47 |
| Msa0529350 | Msa1399090 | 0.810401 | 1.173843e-50 | -8.615850e-47 |
| Msa0529350 | Msa1418240 | 0.802613 | 5.163208e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529350 | MtrunA17_Chr4g0011291 | 97.126 | 522 | 13 | 1 | 1 | 520 | 1 | 522 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529350 | AT2G45300.1 | 74.573 | 527 | 120 | 4 | 1 | 520 | 1 | 520 | 0.0 | 783 |
| Msa0529350 | AT2G45300.2 | 74.573 | 527 | 120 | 4 | 1 | 520 | 1 | 520 | 0.0 | 783 |
| Msa0529350 | AT2G45300.4 | 74.573 | 527 | 120 | 4 | 1 | 520 | 1 | 520 | 0.0 | 783 |
| Msa0529350 | AT2G45300.3 | 74.138 | 522 | 121 | 4 | 1 | 515 | 1 | 515 | 0.0 | 771 |
| Msa0529350 | AT1G48860.1 | 77.755 | 481 | 97 | 3 | 43 | 520 | 48 | 521 | 0.0 | 733 |
| Msa0529350 | AT1G48860.2 | 76.715 | 481 | 83 | 3 | 68 | 520 | 10 | 489 | 0.0 | 716 |
Find 144 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCTATTAAGGAGATTTC+TGG | 0.187856 | 4_1:-2843222 | Msa0529350:CDS |
| CTAGCTGGTGCAGCAGTTAC+TGG | 0.232551 | 4_1:-2839538 | Msa0529350:CDS |
| GATTGTGTTGGAACCTATTA+AGG | 0.234545 | 4_1:-2843232 | Msa0529350:CDS |
| CTTCCAGAAATCTCCTTAAT+AGG | 0.251478 | 4_1:+2843219 | None:intergenic |
| GCCTTCCACAACAGCTTGTT+TGG | 0.260609 | 4_1:+2841434 | None:intergenic |
| TTAACTTCATCTTTAGATTC+AGG | 0.269585 | 4_1:+2841396 | None:intergenic |
| GGGGTTGGTGTGGTAGTTGT+TGG | 0.271119 | 4_1:+2843593 | None:intergenic |
| TTCATTGAGGTCAAGCATTT+GGG | 0.273349 | 4_1:-2843385 | Msa0529350:CDS |
| TCGTAGAACACAGTGCTAAT+TGG | 0.283582 | 4_1:-2839729 | Msa0529350:CDS |
| AATGTATTGGTCTTTGTATT+GGG | 0.289337 | 4_1:+2843558 | None:intergenic |
| TTGTTGAATTGTGAAAATTA+TGG | 0.304085 | 4_1:+2843439 | None:intergenic |
| TGCTAATTGGGACAGGTTCT+TGG | 0.312726 | 4_1:-2839716 | Msa0529350:CDS |
| GTTGGGAAGGGAGGGCTTCC+AGG | 0.314229 | 4_1:-2840649 | Msa0529350:CDS |
| TTTCATTGAGGTCAAGCATT+TGG | 0.318418 | 4_1:-2843386 | Msa0529350:CDS |
| GTACTTGACTGCTTTGCTTA+TGG | 0.322664 | 4_1:-2839857 | Msa0529350:CDS |
| GGGGAATTCTGTTGTGTTGA+AGG | 0.324609 | 4_1:-2843295 | Msa0529350:CDS |
| GATGAAGTTAATTTATTCCT+TGG | 0.328404 | 4_1:-2841384 | Msa0529350:CDS |
| CGAAATGACTTTGAAGTTGA+TGG | 0.332647 | 4_1:-2839767 | Msa0529350:CDS |
| CACTTAACCATTGTATTAGT+TGG | 0.333054 | 4_1:-2843638 | Msa0529350:five_prime_UTR |
| TGGAAATTGTGATGCGGGTA+GGG | 0.335124 | 4_1:-2843316 | Msa0529350:CDS |
| ATGAACTTCACCTACCAAAA+AGG | 0.339652 | 4_1:+2843706 | None:intergenic |
| CAATTGGTCTCTCTCTCATT+CGG | 0.348009 | 4_1:+2840752 | None:intergenic |
| CAATGTATTGGTCTTTGTAT+TGG | 0.351202 | 4_1:+2843557 | None:intergenic |
| CTGTGGGACAAGCAGTTTAC+AGG | 0.352564 | 4_1:-2839494 | Msa0529350:intron |
| GGCGGAACTATCACGGTTAT+AGG | 0.353223 | 4_1:-2839517 | Msa0529350:CDS |
| CCAGGATCGTTGATGGTAAC+TGG | 0.356754 | 4_1:+2836967 | None:intergenic |
| ACCTTCAACAAAAGCATTGC+CGG | 0.362144 | 4_1:+2839585 | None:intergenic |
| GGAAATTGTGATGCGGGTAG+GGG | 0.363553 | 4_1:-2843315 | Msa0529350:CDS |
| CGCATGCAGGTGAAACTGTC+TGG | 0.373379 | 4_1:-2839895 | Msa0529350:intron |
| TGCTGAAGTTCTTGAAAAGA+TGG | 0.379657 | 4_1:-2838642 | Msa0529350:CDS |
| TCTGGAAGTATTACATTGCC+TGG | 0.379783 | 4_1:-2843204 | Msa0529350:CDS |
| TGTCCACCTGTTCGTATAGT+TGG | 0.380105 | 4_1:-2840667 | Msa0529350:CDS |
| GATGTGACATTCAATTTCTC+AGG | 0.381023 | 4_1:+2837054 | None:intergenic |
| GAAAACAGTGTAACTGTTAC+CGG | 0.381454 | 4_1:-2838599 | Msa0529350:CDS |
| TGTTGAATTGTGAAAATTAT+GGG | 0.390247 | 4_1:+2843440 | None:intergenic |
| TGATTTGGTGTTCAATGTAT+TGG | 0.390421 | 4_1:+2843545 | None:intergenic |
| AACTTTAAGCAAAATTGAAA+TGG | 0.394967 | 4_1:-2843499 | Msa0529350:exon |
| CGTAGAACACAGTGCTAATT+GGG | 0.396858 | 4_1:-2839728 | Msa0529350:CDS |
| TCAAGGACTTGAAAGTAGTC+AGG | 0.407342 | 4_1:+2836925 | None:intergenic |
| GTGTTCAAAATCTTGACTAT+AGG | 0.411643 | 4_1:+2843734 | None:intergenic |
| AATTGGTCTCTCTCTCATTC+GGG | 0.412106 | 4_1:+2840753 | None:intergenic |
| TACTGCAATGCGTCCTTTGA+CGG | 0.424822 | 4_1:-2841352 | Msa0529350:CDS |
| ATGGCAGCTCCGTTGGCCCT+TGG | 0.427336 | 4_1:-2839838 | Msa0529350:CDS |
| TTTGCTTATGGCAGCTCCGT+TGG | 0.432957 | 4_1:-2839845 | Msa0529350:CDS |
| GCAAGTGTCATGGCAACATC+TGG | 0.434911 | 4_1:+2838512 | None:intergenic |
| TTGAAGTTGATGGAGCGCTT+TGG | 0.439406 | 4_1:-2839757 | Msa0529350:CDS |
| ACGGCAGCCTTGGTTGCTGC+AGG | 0.440585 | 4_1:-2841333 | Msa0529350:CDS |
| CCCTTCCCAACTATACGAAC+AGG | 0.441067 | 4_1:+2840661 | None:intergenic |
| GGGCCTCCACGGGATTCTTC+CGG | 0.442182 | 4_1:-2838578 | Msa0529350:CDS |
| CCAATTGGAGATTTAGTGTC+TGG | 0.444538 | 4_1:-2840736 | Msa0529350:CDS |
| TTTGGGGCTCTTCAAAATCA+TGG | 0.447364 | 4_1:-2843368 | Msa0529350:CDS |
| CGAATGAGAGAGAGACCAAT+TGG | 0.449698 | 4_1:-2840751 | Msa0529350:CDS |
| GCGTCCTTTGACGGCAGCCT+TGG | 0.455283 | 4_1:-2841343 | Msa0529350:CDS |
| TTGGAAATTGTGATGCGGGT+AGG | 0.459701 | 4_1:-2843317 | Msa0529350:CDS |
| CCAGTTACCATCAACGATCC+TGG | 0.459791 | 4_1:-2836967 | Msa0529350:CDS |
| TTAGTTGCCAACTAATACAA+TGG | 0.460301 | 4_1:+2843631 | None:intergenic |
| GGTGTTATCACACAGTAATC+AGG | 0.461114 | 4_1:+2837078 | None:intergenic |
| CCAGACACTAAATCTCCAAT+TGG | 0.462623 | 4_1:+2840736 | None:intergenic |
| CAAAGGACGCATTGCAGTAC+CGG | 0.465602 | 4_1:+2841356 | None:intergenic |
| CTTGAGGCATTAAAGACCCT+TGG | 0.467801 | 4_1:-2841483 | Msa0529350:CDS |
| AGCATTCTTGTATATTAAGT+AGG | 0.468037 | 4_1:-2836884 | Msa0529350:three_prime_UTR |
| AACTGTTACCGGGCCTCCAC+GGG | 0.469893 | 4_1:-2838588 | Msa0529350:CDS |
| GGTCTAAGTCTTTGTCCAAT+CGG | 0.478048 | 4_1:-2843182 | Msa0529350:CDS |
| AGTGCTAGTTACTTTCTAGC+TGG | 0.478748 | 4_1:-2839553 | Msa0529350:CDS |
| TTCAAAGTCATTTCGACATA+CGG | 0.479092 | 4_1:+2839775 | None:intergenic |
| CAGCAAAATCAGTTTCATTG+AGG | 0.481774 | 4_1:-2843398 | Msa0529350:CDS |
| GTCCACCTGTTCGTATAGTT+GGG | 0.482453 | 4_1:-2840666 | Msa0529350:CDS |
| GTTGTTGCACTATATGCTAA+TGG | 0.485600 | 4_1:-2838488 | Msa0529350:CDS |
| AATTTATTCCTTGGAAATGC+CGG | 0.486192 | 4_1:-2841375 | Msa0529350:CDS |
| TGTGCAACCAGGATCGTTGA+TGG | 0.491375 | 4_1:+2836960 | None:intergenic |
| GGAAGAATCCCGTGGAGGCC+CGG | 0.497540 | 4_1:+2838580 | None:intergenic |
| TAACTGTTACCGGGCCTCCA+CGG | 0.500019 | 4_1:-2838589 | Msa0529350:CDS |
| TGGGACAGGTTCTTGGTCCA+TGG | 0.500853 | 4_1:-2839709 | Msa0529350:CDS |
| GCTGAAGTTCTTGAAAAGAT+GGG | 0.501702 | 4_1:-2838641 | Msa0529350:CDS |
| AGAGAACTTGTTAGATAGTG+AGG | 0.501939 | 4_1:-2841520 | Msa0529350:CDS |
| ATTTCAGATACATACTTGAC+GGG | 0.514182 | 4_1:-2840780 | Msa0529350:intron |
| TTGGGAAGGGAGGGCTTCCA+GGG | 0.514282 | 4_1:-2840648 | Msa0529350:CDS |
| ACTATCACGGTTATAGGCTG+TGG | 0.515721 | 4_1:-2839511 | Msa0529350:CDS |
| ATAGGTTCCAACACAATCTC+CGG | 0.517739 | 4_1:+2843237 | None:intergenic |
| GAAATTGTGATGCGGGTAGG+GGG | 0.517799 | 4_1:-2843314 | Msa0529350:CDS |
| TATTTCAGATACATACTTGA+CGG | 0.519370 | 4_1:-2840781 | Msa0529350:intron |
| CTGGAAGTATTACATTGCCT+GGG | 0.521222 | 4_1:-2843203 | Msa0529350:CDS |
| GCAACCAAGGCTGCCGTCAA+AGG | 0.525534 | 4_1:+2841339 | None:intergenic |
| ACCTGTTCGTATAGTTGGGA+AGG | 0.528976 | 4_1:-2840662 | Msa0529350:CDS |
| TTCGTATAGTTGGGAAGGGA+GGG | 0.530458 | 4_1:-2840657 | Msa0529350:CDS |
| TTTATTGGAAATTGTGATGC+GGG | 0.533802 | 4_1:-2843321 | Msa0529350:CDS |
| AATGCTTTGTAAATCTCTCA+AGG | 0.535419 | 4_1:+2836908 | None:intergenic |
| TACATATGATGATCATAGAA+TGG | 0.536685 | 4_1:-2837025 | Msa0529350:CDS |
| GCAGCCTTGGTTGCTGCAGG+TGG | 0.537285 | 4_1:-2841330 | Msa0529350:CDS |
| GCTTCTAGCTGCTCTATCTG+AGG | 0.547072 | 4_1:-2843154 | Msa0529350:intron |
| GTGTCTGGTCTTAAGCAACT+TGG | 0.547127 | 4_1:-2840721 | Msa0529350:CDS |
| TTGCTGCAGGTGGAAATACA+AGG | 0.547549 | 4_1:-2841320 | Msa0529350:intron |
| TGGGAAGGGAGGGCTTCCAG+GGG | 0.548738 | 4_1:-2840647 | Msa0529350:CDS |
| GTTCGTATAGTTGGGAAGGG+AGG | 0.553909 | 4_1:-2840658 | Msa0529350:CDS |
| TTGCAGTACCGGCATTTCCA+AGG | 0.558927 | 4_1:+2841367 | None:intergenic |
| CATCTTCCACACGAAGTCCA+AGG | 0.563075 | 4_1:+2841466 | None:intergenic |
| TTGGACAAAGACTTAGACCC+AGG | 0.563173 | 4_1:+2843186 | None:intergenic |
| GGGAAGGGAGGGCTTCCAGG+GGG | 0.563647 | 4_1:-2840646 | Msa0529350:CDS |
| CAAGGACTTGAAAGTAGTCA+GGG | 0.567498 | 4_1:+2836926 | None:intergenic |
| AGATGGGAGCTAAAGTTACA+TGG | 0.567569 | 4_1:-2838625 | Msa0529350:CDS |
| CCTTCAACAAAAGCATTGCC+GGG | 0.568002 | 4_1:+2839586 | None:intergenic |
| GCCTTGCAAGACTTTCCGAC+CGG | 0.570695 | 4_1:+2838559 | None:intergenic |
| GTATTGGTCTTTGTATTGGG+AGG | 0.574526 | 4_1:+2843561 | None:intergenic |
| AACACAGTGCTAATTGGGAC+AGG | 0.576861 | 4_1:-2839723 | Msa0529350:CDS |
| TGATGATCATAGAATGGCCA+TGG | 0.577715 | 4_1:-2837019 | Msa0529350:CDS |
| GGTCCCACTGCTATTAGAGA+TGG | 0.578119 | 4_1:-2838467 | Msa0529350:intron |
| GCTGTTGTGGAAGGCAGTGG+TGG | 0.582862 | 4_1:-2841426 | Msa0529350:CDS |
| AGCTAGAAGCAAAATCCGAT+TGG | 0.585461 | 4_1:+2843167 | None:intergenic |
| AACAACCAAACAAGCTGTTG+TGG | 0.587688 | 4_1:-2841439 | Msa0529350:CDS |
| ATCTTCCACACGAAGTCCAA+GGG | 0.589211 | 4_1:+2841467 | None:intergenic |
| ACCAAACAAGCTGTTGTGGA+AGG | 0.592554 | 4_1:-2841435 | Msa0529350:CDS |
| CTAGGAGCAATAGTTGAAGA+AGG | 0.594639 | 4_1:-2837102 | Msa0529350:CDS |
| GGATATTCATTACATGCTTG+AGG | 0.596449 | 4_1:-2841499 | Msa0529350:CDS |
| ATTTCCACCTGCAGCAACCA+AGG | 0.596983 | 4_1:+2841326 | None:intergenic |
| CAAGCTGTTGTGGAAGGCAG+TGG | 0.597069 | 4_1:-2841429 | Msa0529350:CDS |
| AAAGACCCTTGGACTTCGTG+TGG | 0.599980 | 4_1:-2841472 | Msa0529350:CDS |
| TCCGGTCGGAAAGTCTTGCA+AGG | 0.600579 | 4_1:-2838560 | Msa0529350:CDS |
| CTTTATTGGAAATTGTGATG+CGG | 0.603694 | 4_1:-2843322 | Msa0529350:CDS |
| GACAGGTTCTTGGTCCATGG+AGG | 0.603780 | 4_1:-2839706 | Msa0529350:CDS |
| AGTTACTGGCGGAACTATCA+CGG | 0.604333 | 4_1:-2839524 | Msa0529350:CDS |
| TGCAACAACAGCAAGTGTCA+TGG | 0.606229 | 4_1:+2838502 | None:intergenic |
| AGCAGCAAGTGAAAATGCCA+TGG | 0.609806 | 4_1:+2837002 | None:intergenic |
| CTATCACGGTTATAGGCTGT+GGG | 0.615693 | 4_1:-2839510 | Msa0529350:CDS |
| CTCAATCTCAACATCACCAA+GGG | 0.617444 | 4_1:+2839822 | None:intergenic |
| CCTGTTCGTATAGTTGGGAA+GGG | 0.622183 | 4_1:-2840661 | Msa0529350:CDS |
| AATCTGCACAGAACTCAGAA+AGG | 0.627914 | 4_1:-2837352 | Msa0529350:intron |
| TTCCCAACTATACGAACAGG+TGG | 0.629795 | 4_1:+2840664 | None:intergenic |
| TCAACGATCCTGGTTGCACA+AGG | 0.630949 | 4_1:-2836957 | Msa0529350:CDS |
| TGCGCCGCCGGAGATTGTGT+TGG | 0.631894 | 4_1:-2843244 | Msa0529350:CDS |
| TCAACATCACCAAGGGCCAA+CGG | 0.634886 | 4_1:+2839829 | None:intergenic |
| CTCCACGGGATTCTTCCGGT+CGG | 0.638233 | 4_1:-2838574 | Msa0529350:CDS |
| GTGACATTCAATTTCTCAGG+TGG | 0.643818 | 4_1:+2837057 | None:intergenic |
| ATACCATCTCTAATAGCAGT+GGG | 0.648802 | 4_1:+2838464 | None:intergenic |
| GCTGGTGCAGCAGTTACTGG+CGG | 0.649225 | 4_1:-2839535 | Msa0529350:CDS |
| CATACCATCTCTAATAGCAG+TGG | 0.651100 | 4_1:+2838463 | None:intergenic |
| TCATTGAGGTCAAGCATTTG+GGG | 0.651769 | 4_1:-2843384 | Msa0529350:CDS |
| ATTGGTCTCTCTCTCATTCG+GGG | 0.653517 | 4_1:+2840754 | None:intergenic |
| TTCCGACCGGAAGAATCCCG+TGG | 0.664740 | 4_1:+2838572 | None:intergenic |
| AAAACAGTGTAACTGTTACC+GGG | 0.672809 | 4_1:-2838598 | Msa0529350:CDS |
| CTGTTGTGGAAGGCAGTGGT+GGG | 0.674586 | 4_1:-2841425 | Msa0529350:CDS |
| TCTCAATCTCAACATCACCA+AGG | 0.684401 | 4_1:+2839821 | None:intergenic |
| TTTCAGATACATACTTGACG+GGG | 0.713014 | 4_1:-2840779 | Msa0529350:intron |
| GGTTCCAACACAATCTCCGG+CGG | 0.714320 | 4_1:+2843240 | None:intergenic |
| CGACCGGAAGAATCCCGTGG+AGG | 0.725610 | 4_1:+2838575 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTAAAATAGGTAATTA+AGG | - | chr4_1:2838167-2838186 | Msa0529350:intron | 10.0% |
| !!! | AAATTTTGTATGTATTTATG+TGG | - | chr4_1:2837581-2837600 | Msa0529350:intron | 15.0% |
| !!! | AATTTTGATAGTATTGATTT+TGG | - | chr4_1:2837971-2837990 | Msa0529350:intron | 15.0% |
| !!! | TGAAGACAAATATTTAAAAT+AGG | - | chr4_1:2838158-2838177 | Msa0529350:intron | 15.0% |
| !!! | TCATATAGTTATTCTTATTT+TGG | - | chr4_1:2838430-2838449 | Msa0529350:intron | 15.0% |
| !! | TACAATGATAAGTTATAATT+TGG | - | chr4_1:2838481-2838500 | Msa0529350:CDS | 15.0% |
| !! | ACAATGATAAGTTATAATTT+GGG | - | chr4_1:2838482-2838501 | Msa0529350:CDS | 15.0% |
| !!! | ATAGTTGATTTAAAAATCAA+TGG | + | chr4_1:2838868-2838887 | None:intergenic | 15.0% |
| !! | AAAATATATTTAATTCACCA+TGG | - | chr4_1:2839259-2839278 | Msa0529350:intron | 15.0% |
| !! | TTCTTCATAAAATACATTAT+AGG | + | chr4_1:2839624-2839643 | None:intergenic | 15.0% |
| !!! | TATATTTTAGCATGTTTTTT+TGG | - | chr4_1:2839705-2839724 | Msa0529350:CDS | 15.0% |
| !! | TAATAGTTATTATAAAGATG+TGG | + | chr4_1:2840210-2840229 | None:intergenic | 15.0% |
| !! | ATAACTATTATAATACACTA+CGG | - | chr4_1:2840220-2840239 | Msa0529350:intron | 15.0% |
| !!! | ATTTCTTTTCAAAGAAAAAT+TGG | + | chr4_1:2840523-2840542 | None:intergenic | 15.0% |
| !!! | TAATAATTATTGAGTATTGT+CGG | + | chr4_1:2841216-2841235 | None:intergenic | 15.0% |
| !! | ATTATCATATTCACATAAAA+GGG | + | chr4_1:2841514-2841533 | None:intergenic | 15.0% |
| !! | TATTATCATATTCACATAAA+AGG | + | chr4_1:2841515-2841534 | None:intergenic | 15.0% |
| !! | ATAATATCTTTCCAAATAAA+AGG | - | chr4_1:2841529-2841548 | Msa0529350:CDS | 15.0% |
| !!! | AAACATTTAATCCTTTTATT+TGG | + | chr4_1:2841543-2841562 | None:intergenic | 15.0% |
| !! | TAAACATATAGTCATATATT+TGG | + | chr4_1:2841618-2841637 | None:intergenic | 15.0% |
| !!! | ATTTAGCTGAATTATTTTTT+CGG | - | chr4_1:2841676-2841695 | Msa0529350:intron | 15.0% |
| !!! | TCAAAACTACATTTTTTTTA+AGG | - | chr4_1:2842639-2842658 | Msa0529350:intron | 15.0% |
| !!! | CAAAACTACATTTTTTTTAA+GGG | - | chr4_1:2842640-2842659 | Msa0529350:intron | 15.0% |
| !!! | AAAACTACATTTTTTTTAAG+GGG | - | chr4_1:2842641-2842660 | Msa0529350:intron | 15.0% |
| !!! | ATGTTTTGATAATATTGGAT+TGG | + | chr4_1:2836789-2836808 | None:intergenic | 20.0% |
| !! | AACTTTAAGCAAAATTGAAA+TGG | - | chr4_1:2837046-2837065 | Msa0529350:CDS | 20.0% |
| !! | TGTTGAATTGTGAAAATTAT+GGG | + | chr4_1:2837108-2837127 | None:intergenic | 20.0% |
| !! | TTGTTGAATTGTGAAAATTA+TGG | + | chr4_1:2837109-2837128 | None:intergenic | 20.0% |
| !!! | AAATCTTGATTTTGAAGTTT+TGG | - | chr4_1:2837549-2837568 | Msa0529350:intron | 20.0% |
| !! | AAGGTAAAGTAATTTATGTT+TGG | - | chr4_1:2837664-2837683 | Msa0529350:intron | 20.0% |
| !! | TTCAAGATAGAATCAATTAT+GGG | - | chr4_1:2837765-2837784 | Msa0529350:intron | 20.0% |
| !! | ATAATTAATCTTGACAAGTT+TGG | + | chr4_1:2837817-2837836 | None:intergenic | 20.0% |
| !!! | TTACACTTTTGTACATTTTA+TGG | - | chr4_1:2837882-2837901 | Msa0529350:intron | 20.0% |
| !!! | AATTGATTCTTAACAATTCA+TGG | - | chr4_1:2838045-2838064 | Msa0529350:intron | 20.0% |
| !!! | AAACACAAATAAAACCTTTT+TGG | + | chr4_1:2838115-2838134 | None:intergenic | 20.0% |
| !!! | CCTTTATTAAATTACTTTTG+TGG | + | chr4_1:2838289-2838308 | None:intergenic | 20.0% |
| !! | CCACAAAAGTAATTTAATAA+AGG | - | chr4_1:2838286-2838305 | Msa0529350:intron | 20.0% |
| !! | TTTAAGAAGATTGACTAATA+TGG | + | chr4_1:2839557-2839576 | None:intergenic | 20.0% |
| !! | TCTAATTAGAAAACCAAATA+GGG | + | chr4_1:2840446-2840465 | None:intergenic | 20.0% |
| !! | ATCTAATTAGAAAACCAAAT+AGG | + | chr4_1:2840447-2840466 | None:intergenic | 20.0% |
| !! | TGGGATAATAAGATTAAAAA+TGG | + | chr4_1:2840627-2840646 | None:intergenic | 20.0% |
| !!! | GATGATATTGATTCATATAA+AGG | + | chr4_1:2841133-2841152 | None:intergenic | 20.0% |
| !! | GAACAAATATAAAAAGATAG+AGG | + | chr4_1:2841181-2841200 | None:intergenic | 20.0% |
| !!! | ATTTTATATGGAACATTGTA+GGG | - | chr4_1:2841356-2841375 | Msa0529350:CDS | 20.0% |
| !! | TTTCTAATTTCTTCATTGTA+AGG | - | chr4_1:2841428-2841447 | Msa0529350:CDS | 20.0% |
| !! | ATGAGTAATAGATAAAAGTA+AGG | + | chr4_1:2841466-2841485 | None:intergenic | 20.0% |
| !! | TTTAGTGTAATCATTGTATT+TGG | + | chr4_1:2841592-2841611 | None:intergenic | 20.0% |
| !! | TATATGACTATATGTTTACA+AGG | - | chr4_1:2841620-2841639 | Msa0529350:intron | 20.0% |
| !!! | TAACTTTGTCCATTTTTTAA+AGG | - | chr4_1:2841867-2841886 | Msa0529350:intron | 20.0% |
| !!! | AACTTTGTCCATTTTTTAAA+GGG | - | chr4_1:2841868-2841887 | Msa0529350:intron | 20.0% |
| !! | ATGATAATAGTGAAGAAATA+TGG | + | chr4_1:2842286-2842305 | None:intergenic | 20.0% |
| !!! | TTTTGTAAAATGTGAACAAA+AGG | - | chr4_1:2842798-2842817 | Msa0529350:intron | 20.0% |
| !! | TTTGTAAAATGTGAACAAAA+GGG | - | chr4_1:2842799-2842818 | Msa0529350:intron | 20.0% |
| !! | TTTGAACACATTTTCCTTTT+TGG | - | chr4_1:2836825-2836844 | Msa0529350:three_prime_UTR | 25.0% |
| !!! | AATGTATTGGTCTTTGTATT+GGG | + | chr4_1:2836990-2837009 | None:intergenic | 25.0% |
| !!! | ATTGTTGATTTTGCTTAACT+GGG | + | chr4_1:2837072-2837091 | None:intergenic | 25.0% |
| ! | CATAAAAATGGAGTCTTTAT+TGG | - | chr4_1:2837209-2837228 | Msa0529350:intron | 25.0% |
| ! | TTATGTATTTAGCGTATGTT+TGG | - | chr4_1:2837441-2837460 | Msa0529350:intron | 25.0% |
| ! | TTATGCATTTAATGTGTGTT+TGG | - | chr4_1:2837512-2837531 | Msa0529350:intron | 25.0% |
| ! | TTTGTATGTATTTATGTGGT+TGG | - | chr4_1:2837585-2837604 | Msa0529350:intron | 25.0% |
| ! | TCTATCTTGAAGCTAAAAAT+TGG | + | chr4_1:2837756-2837775 | None:intergenic | 25.0% |
| ! | CTTCAAGATAGAATCAATTA+TGG | - | chr4_1:2837764-2837783 | Msa0529350:intron | 25.0% |
| ! | TCAAGATAGAATCAATTATG+GGG | - | chr4_1:2837766-2837785 | Msa0529350:intron | 25.0% |
| !! | AATGTACAAAAGTGTAAGTT+TGG | + | chr4_1:2837879-2837898 | None:intergenic | 25.0% |
| ! | TAGACATGTAATTACCAAAA+AGG | - | chr4_1:2838098-2838117 | Msa0529350:intron | 25.0% |
| ! | TTATCATTGTAGATCTTTCA+TGG | + | chr4_1:2838472-2838491 | None:intergenic | 25.0% |
| ! | ATGATAAGTTATAATTTGGG+AGG | - | chr4_1:2838485-2838504 | Msa0529350:CDS | 25.0% |
| !! | TATTTTGTCATACACACTTT+CGG | + | chr4_1:2838575-2838594 | None:intergenic | 25.0% |
| ! | AAGTACACTTTCATAAACAT+GGG | - | chr4_1:2838605-2838624 | Msa0529350:CDS | 25.0% |
| ! | AAAGTGAGAAGCTAAATTAT+CGG | + | chr4_1:2838647-2838666 | None:intergenic | 25.0% |
| !!! | TATTCTACTGTGTTTTATTC+AGG | - | chr4_1:2838989-2839008 | Msa0529350:intron | 25.0% |
| !!! | ATTCTACTGTGTTTTATTCA+GGG | - | chr4_1:2838990-2839009 | Msa0529350:intron | 25.0% |
| ! | TTAACTTCATCTTTAGATTC+AGG | + | chr4_1:2839152-2839171 | None:intergenic | 25.0% |
| ! | GATGAAGTTAATTTATTCCT+TGG | - | chr4_1:2839161-2839180 | Msa0529350:intron | 25.0% |
| ! | TAGAAAATGTTGTCAATTAG+CGG | - | chr4_1:2839374-2839393 | Msa0529350:intron | 25.0% |
| ! | GAACTTTATAACAGGATAAA+AGG | + | chr4_1:2839532-2839551 | None:intergenic | 25.0% |
| ! | ATATGGATGAACTTTATAAC+AGG | + | chr4_1:2839540-2839559 | None:intergenic | 25.0% |
| ! | TATTTCAGATACATACTTGA+CGG | - | chr4_1:2839764-2839783 | Msa0529350:CDS | 25.0% |
| ! | TGTGTTTATATCACATACAT+TGG | - | chr4_1:2839981-2840000 | Msa0529350:intron | 25.0% |
| ! | AAGCGAAGATAAATAAAAAG+TGG | + | chr4_1:2840033-2840052 | None:intergenic | 25.0% |
| ! | AGTTATTATAAAGATGTGGA+GGG | + | chr4_1:2840206-2840225 | None:intergenic | 25.0% |
| ! | TAGTTATTATAAAGATGTGG+AGG | + | chr4_1:2840207-2840226 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+AGG | + | chr4_1:2840246-2840265 | None:intergenic | 25.0% |
| ! | CTTATACATAAGCACTTATA+TGG | + | chr4_1:2840280-2840299 | None:intergenic | 25.0% |
| !! | AAAATGGATCAAATGACTTT+TGG | + | chr4_1:2840611-2840630 | None:intergenic | 25.0% |
| ! | TTAATCTCATTGCATTAAGA+CGG | + | chr4_1:2840913-2840932 | None:intergenic | 25.0% |
| !! | ATTGATTCATATAAAGGACA+GGG | + | chr4_1:2841127-2841146 | None:intergenic | 25.0% |
| !!! | TATTGATTCATATAAAGGAC+AGG | + | chr4_1:2841128-2841147 | None:intergenic | 25.0% |
| ! | AATATCATCATGTGAACAAT+GGG | - | chr4_1:2841144-2841163 | Msa0529350:intron | 25.0% |
| ! | AAAAAGATAGAGGACAAAAA+TGG | + | chr4_1:2841171-2841190 | None:intergenic | 25.0% |
| ! | AGTAGTGAAATATCATTATC+TGG | + | chr4_1:2841294-2841313 | None:intergenic | 25.0% |
| !! | CATTTTATATGGAACATTGT+AGG | - | chr4_1:2841355-2841374 | Msa0529350:CDS | 25.0% |
| !!! | TTTGGTAATGAACAGTTTAA+GGG | + | chr4_1:2841574-2841593 | None:intergenic | 25.0% |
| !!! | ATTTGGTAATGAACAGTTTA+AGG | + | chr4_1:2841575-2841594 | None:intergenic | 25.0% |
| !! | AAATTGATTCTATCATTACC+AGG | - | chr4_1:2841644-2841663 | Msa0529350:intron | 25.0% |
| ! | ATCAATAAGAATTGAGAAGT+TGG | + | chr4_1:2841776-2841795 | None:intergenic | 25.0% |
| !! | TTACATCTCCCTTTAAAAAA+TGG | + | chr4_1:2841879-2841898 | None:intergenic | 25.0% |
| ! | AACATCTTAGATTATGTCTT+AGG | - | chr4_1:2842211-2842230 | Msa0529350:intron | 25.0% |
| !! | AACAGTACTTTTCTTAACTT+TGG | - | chr4_1:2842432-2842451 | Msa0529350:intron | 25.0% |
| ! | CAATAATCATGATGCTTAAA+AGG | + | chr4_1:2842486-2842505 | None:intergenic | 25.0% |
| !! | CTTTTAAGCATCATGATTAT+TGG | - | chr4_1:2842484-2842503 | Msa0529350:intron | 25.0% |
| ! | GGAATCTTGAGTATATAAAT+TGG | - | chr4_1:2842505-2842524 | Msa0529350:intron | 25.0% |
| !! | TATTTTGCAACTGTTATTGA+GGG | - | chr4_1:2842696-2842715 | Msa0529350:intron | 25.0% |
| ! | TTGTAAAATGTGAACAAAAG+GGG | - | chr4_1:2842800-2842819 | Msa0529350:intron | 25.0% |
| ! | ATTTATTAACTTAACCCACT+TGG | - | chr4_1:2843277-2843296 | Msa0529350:CDS | 25.0% |
| ! | TTTATTAACTTAACCCACTT+GGG | - | chr4_1:2843278-2843297 | Msa0529350:CDS | 25.0% |
| ! | TACATATGATGATCATAGAA+TGG | - | chr4_1:2843520-2843539 | Msa0529350:five_prime_UTR | 25.0% |
| ! | AGCATTCTTGTATATTAAGT+AGG | - | chr4_1:2843661-2843680 | Msa0529350:five_prime_UTR | 25.0% |
| !!! | ACAAAGTTGTGAGTATTTTT+TGG | - | chr4_1:2843705-2843724 | Msa0529350:five_prime_UTR | 25.0% |
| !!! | AGGCGATGTTTTGATAATAT+TGG | + | chr4_1:2836794-2836813 | None:intergenic | 30.0% |
| GTGTTCAAAATCTTGACTAT+AGG | + | chr4_1:2836814-2836833 | None:intergenic | 30.0% | |
| !! | AACACATTTTCCTTTTTGGT+AGG | - | chr4_1:2836829-2836848 | Msa0529350:three_prime_UTR | 30.0% |
| CACTTAACCATTGTATTAGT+TGG | - | chr4_1:2836907-2836926 | Msa0529350:CDS | 30.0% | |
| TTAGTTGCCAACTAATACAA+TGG | + | chr4_1:2836917-2836936 | None:intergenic | 30.0% | |
| !! | CAATGTATTGGTCTTTGTAT+TGG | + | chr4_1:2836991-2837010 | None:intergenic | 30.0% |
| !! | TGATTTGGTGTTCAATGTAT+TGG | + | chr4_1:2837003-2837022 | None:intergenic | 30.0% |
| !!! | GATTGTTGATTTTGCTTAAC+TGG | + | chr4_1:2837073-2837092 | None:intergenic | 30.0% |
| !! | GAAACTGATTTTGCTGAATT+GGG | + | chr4_1:2837143-2837162 | None:intergenic | 30.0% |
| !! | TGAAACTGATTTTGCTGAAT+TGG | + | chr4_1:2837144-2837163 | None:intergenic | 30.0% |
| ! | TGGAGTTTGAAGCATAAAAA+TGG | - | chr4_1:2837197-2837216 | Msa0529350:intron | 30.0% |
| CTTTATTGGAAATTGTGATG+CGG | - | chr4_1:2837223-2837242 | Msa0529350:intron | 30.0% | |
| TTTATTGGAAATTGTGATGC+GGG | - | chr4_1:2837224-2837243 | Msa0529350:intron | 30.0% | |
| ! | TATTTATGTGGTTGGTTATG+TGG | - | chr4_1:2837593-2837612 | Msa0529350:intron | 30.0% |
| !! | GATTTTGAGTGAATTGATTC+CGG | - | chr4_1:2837627-2837646 | Msa0529350:intron | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | - | chr4_1:2837836-2837855 | Msa0529350:intron | 30.0% |
| ! | GACTAAAAGTGATTTGTGTT+TGG | - | chr4_1:2838008-2838027 | Msa0529350:intron | 30.0% |
| TGTGTTTATATGACAAACGT+TGG | - | chr4_1:2838128-2838147 | Msa0529350:intron | 30.0% | |
| ! | TACCTAGTCAAACAATTTTG+TGG | + | chr4_1:2838384-2838403 | None:intergenic | 30.0% |
| ! | TGTTTATGAAAGTGTACTTC+AGG | + | chr4_1:2838604-2838623 | None:intergenic | 30.0% |
| GAAGTACACTTTCATAAACA+TGG | - | chr4_1:2838604-2838623 | Msa0529350:CDS | 30.0% | |
| AGTACACTTTCATAAACATG+GGG | - | chr4_1:2838606-2838625 | Msa0529350:CDS | 30.0% | |
| ! | AATTTAGCTTCTCACTTTAG+TGG | - | chr4_1:2838649-2838668 | Msa0529350:CDS | 30.0% |
| TAGAATAGTCTCTATTCAAC+AGG | + | chr4_1:2838976-2838995 | None:intergenic | 30.0% | |
| AATTTATTCCTTGGAAATGC+CGG | - | chr4_1:2839170-2839189 | Msa0529350:intron | 30.0% | |
| TTGGTAAATAATGGTTGTAG+AGG | - | chr4_1:2839295-2839314 | Msa0529350:intron | 30.0% | |
| GATAGCAGAAAATAAAACAG+TGG | + | chr4_1:2839445-2839464 | None:intergenic | 30.0% | |
| !!! | CTGTTTTATTTTCTGCTATC+TGG | - | chr4_1:2839445-2839464 | Msa0529350:intron | 30.0% |
| ! | TTTTATGAAGAATGCACCAA+AGG | - | chr4_1:2839632-2839651 | Msa0529350:intron | 30.0% |
| ATTTCAGATACATACTTGAC+GGG | - | chr4_1:2839765-2839784 | Msa0529350:CDS | 30.0% | |
| CGGCATAAAATGAAAACTAA+TGG | + | chr4_1:2839938-2839957 | None:intergenic | 30.0% | |
| GTTATTATAAAGATGTGGAG+GGG | + | chr4_1:2840205-2840224 | None:intergenic | 30.0% | |
| ATGTATTTGAGCTTATCTAC+TGG | + | chr4_1:2840410-2840429 | None:intergenic | 30.0% | |
| TCAAATACATCAATCCAAAC+AGG | - | chr4_1:2840420-2840439 | Msa0529350:intron | 30.0% | |
| TACCATTCATATGCCTATTA+TGG | - | chr4_1:2840488-2840507 | Msa0529350:intron | 30.0% | |
| ATCCATAATAGGCATATGAA+TGG | + | chr4_1:2840493-2840512 | None:intergenic | 30.0% | |
| !! | AATGACTTTTGGAGAGAATA+AGG | + | chr4_1:2840600-2840619 | None:intergenic | 30.0% |
| AAAGTACAAGTAGGTTTCTA+CGG | - | chr4_1:2840865-2840884 | Msa0529350:intron | 30.0% | |
| !!! | TAACTGTTGTTTTTCGTATC+AGG | - | chr4_1:2840933-2840952 | Msa0529350:intron | 30.0% |
| CAATATCATCATGTGAACAA+TGG | - | chr4_1:2841143-2841162 | Msa0529350:intron | 30.0% | |
| TGATATTTCACTACTCAAAC+TGG | - | chr4_1:2841299-2841318 | Msa0529350:intron | 30.0% | |
| !! | ATTGTCAGCGTCATTTTATA+TGG | - | chr4_1:2841344-2841363 | Msa0529350:CDS | 30.0% |
| ! | TTTCCTTTTGTCTTTGTTCA+TGG | - | chr4_1:2841386-2841405 | Msa0529350:CDS | 30.0% |
| ! | TTCCTTTTGTCTTTGTTCAT+GGG | - | chr4_1:2841387-2841406 | Msa0529350:CDS | 30.0% |
| GAAATTAGAAACACAAACGA+CGG | + | chr4_1:2841419-2841438 | None:intergenic | 30.0% | |
| !! | TTTTTCGGTGAGTTCTTTAT+TGG | - | chr4_1:2841691-2841710 | Msa0529350:intron | 30.0% |
| !! | TCTTTGAGTTGATGATTAGA+AGG | - | chr4_1:2841718-2841737 | Msa0529350:intron | 30.0% |
| ! | ATGATTAGAAGGAAGTATGT+AGG | - | chr4_1:2841729-2841748 | Msa0529350:intron | 30.0% |
| ! | GACATAATCTAAGATGTTCT+AGG | + | chr4_1:2842209-2842228 | None:intergenic | 30.0% |
| TTTCTTACTGTATATTCCAG+TGG | - | chr4_1:2842341-2842360 | Msa0529350:intron | 30.0% | |
| ATGATGTGATTGTGTGAAAA+TGG | + | chr4_1:2842368-2842387 | None:intergenic | 30.0% | |
| !!! | AAGTTTTTGTTTCGAGTTGA+AGG | - | chr4_1:2842582-2842601 | Msa0529350:intron | 30.0% |
| !!! | AGTTTTTGTTTCGAGTTGAA+GGG | - | chr4_1:2842583-2842602 | Msa0529350:intron | 30.0% |
| ! | CTATTTTGCAACTGTTATTG+AGG | - | chr4_1:2842695-2842714 | Msa0529350:intron | 30.0% |
| ! | ATTTTGCAACTGTTATTGAG+GGG | - | chr4_1:2842697-2842716 | Msa0529350:intron | 30.0% |
| !! | CGTTTTAAACAGTTGAACAA+TGG | - | chr4_1:2842772-2842791 | Msa0529350:intron | 30.0% |
| TGTAAAATGTGAACAAAAGG+GGG | - | chr4_1:2842801-2842820 | Msa0529350:intron | 30.0% | |
| TAACTGAATGTAACATGTGT+TGG | - | chr4_1:2842957-2842976 | Msa0529350:intron | 30.0% | |
| ! | AATGTAACATGTGTTGGTAT+TGG | - | chr4_1:2842963-2842982 | Msa0529350:intron | 30.0% |
| ! | GTATTTCATCTATTTTCCAG+TGG | - | chr4_1:2843133-2843152 | Msa0529350:intron | 30.0% |
| TTAGAAACTACAAAGGAAGT+AGG | + | chr4_1:2843232-2843251 | None:intergenic | 30.0% | |
| ACTTTGTTGATATTTCAGCT+AGG | - | chr4_1:2843425-2843444 | Msa0529350:CDS | 30.0% | |
| AATGCTTTGTAAATCTCTCA+AGG | + | chr4_1:2843640-2843659 | None:intergenic | 30.0% | |
| ATGAACTTCACCTACCAAAA+AGG | + | chr4_1:2836842-2836861 | None:intergenic | 35.0% | |
| ! | TGTATTGGGAGGATTTTGTT+GGG | + | chr4_1:2836976-2836995 | None:intergenic | 35.0% |
| ! | TTGTATTGGGAGGATTTTGT+TGG | + | chr4_1:2836977-2836996 | None:intergenic | 35.0% |
| ! | TTTTGCTGAATTGGGTTTGT+TGG | + | chr4_1:2837135-2837154 | None:intergenic | 35.0% |
| CAGCAAAATCAGTTTCATTG+AGG | - | chr4_1:2837147-2837166 | Msa0529350:intron | 35.0% | |
| TTTCATTGAGGTCAAGCATT+TGG | - | chr4_1:2837159-2837178 | Msa0529350:intron | 35.0% | |
| TTCATTGAGGTCAAGCATTT+GGG | - | chr4_1:2837160-2837179 | Msa0529350:intron | 35.0% | |
| GATTGTGTTGGAACCTATTA+AGG | - | chr4_1:2837313-2837332 | Msa0529350:intron | 35.0% | |
| GAACCTATTAAGGAGATTTC+TGG | - | chr4_1:2837323-2837342 | Msa0529350:intron | 35.0% | |
| CTTCCAGAAATCTCCTTAAT+AGG | + | chr4_1:2837329-2837348 | None:intergenic | 35.0% | |
| TTAGCGTATGTTTGGTTATG+CGG | - | chr4_1:2837449-2837468 | Msa0529350:intron | 35.0% | |
| ! | AGAGCCAAAATTGATTCTAG+AGG | + | chr4_1:2837843-2837862 | None:intergenic | 35.0% |
| ! | ATGGTTCTGTGATTAGAAGT+TGG | - | chr4_1:2837901-2837920 | Msa0529350:intron | 35.0% |
| ATTATCTTTACGCGTGTGTT+TGG | - | chr4_1:2837929-2837948 | Msa0529350:intron | 35.0% | |
| ! | AAATCGATTCTTCATGAAGC+AGG | + | chr4_1:2838262-2838281 | None:intergenic | 35.0% |
| !! | GCTTCATGAAGAATCGATTT+TGG | - | chr4_1:2838262-2838281 | Msa0529350:intron | 35.0% |
| !! | GACTATCTTACAAAGGTGTT+TGG | + | chr4_1:2838316-2838335 | None:intergenic | 35.0% |
| CTAACGTGACTATCTTACAA+AGG | + | chr4_1:2838323-2838342 | None:intergenic | 35.0% | |
| AGATGAAAAAAACCTGCTTC+AGG | - | chr4_1:2838341-2838360 | Msa0529350:intron | 35.0% | |
| !! | CTTCAGGAAGAATCGATTTT+TGG | - | chr4_1:2838357-2838376 | Msa0529350:intron | 35.0% |
| GACCACAAAATTGTTTGACT+AGG | - | chr4_1:2838379-2838398 | Msa0529350:intron | 35.0% | |
| ! | GTACATCTGAAGTCATGATA+GGG | + | chr4_1:2838522-2838541 | None:intergenic | 35.0% |
| ! | TGTACATCTGAAGTCATGAT+AGG | + | chr4_1:2838523-2838542 | None:intergenic | 35.0% |
| CAGAATGTGAATTGTGGATT+TGG | + | chr4_1:2838677-2838696 | None:intergenic | 35.0% | |
| TGGATTCAGAATGTGAATTG+TGG | + | chr4_1:2838683-2838702 | None:intergenic | 35.0% | |
| !! | AAGTGAGTGTTGAACTTTAG+AGG | - | chr4_1:2838741-2838760 | Msa0529350:intron | 35.0% |
| TATCGTTGCACTTTATTCTG+TGG | - | chr4_1:2838888-2838907 | Msa0529350:intron | 35.0% | |
| ATTCAACAGGACATCTATGA+AGG | + | chr4_1:2838963-2838982 | None:intergenic | 35.0% | |
| !! | AGAGAACTTGTTAGATAGTG+AGG | - | chr4_1:2839025-2839044 | Msa0529350:intron | 35.0% |
| GGATATTCATTACATGCTTG+AGG | - | chr4_1:2839046-2839065 | Msa0529350:intron | 35.0% | |
| !! | GAAGCAGTGTTGGTAAATAA+TGG | - | chr4_1:2839286-2839305 | Msa0529350:intron | 35.0% |
| ! | ACCTCACTACTTTCTTTTGT+AGG | - | chr4_1:2839677-2839696 | Msa0529350:intron | 35.0% |
| TCCTACAAAAGAAAGTAGTG+AGG | + | chr4_1:2839681-2839700 | None:intergenic | 35.0% | |
| TTTCAGATACATACTTGACG+GGG | - | chr4_1:2839766-2839785 | Msa0529350:CDS | 35.0% | |
| !! | GCAGATGTTGATTGTTTTCT+TGG | - | chr4_1:2839848-2839867 | Msa0529350:CDS | 35.0% |
| GTGATATAAACACACAAGCA+CGG | + | chr4_1:2839975-2839994 | None:intergenic | 35.0% | |
| ACATCAGTTACAGTGAAATG+TGG | + | chr4_1:2840072-2840091 | None:intergenic | 35.0% | |
| TGACTGTGCATTTGAATTAC+TGG | + | chr4_1:2840104-2840123 | None:intergenic | 35.0% | |
| TGCTTTATGAACTTCGCTAT+TGG | - | chr4_1:2840146-2840165 | Msa0529350:intron | 35.0% | |
| GCTTTATGAACTTCGCTATT+GGG | - | chr4_1:2840147-2840166 | Msa0529350:intron | 35.0% | |
| TAAGCACTTATGAGACTGTT+TGG | + | chr4_1:2840385-2840404 | None:intergenic | 35.0% | |
| TAGAAAGGATATACAGGTGA+GGG | + | chr4_1:2840470-2840489 | None:intergenic | 35.0% | |
| GAATGGTAGAAAGGATATAC+AGG | + | chr4_1:2840476-2840495 | None:intergenic | 35.0% | |
| TAGGCATATGAATGGTAGAA+AGG | + | chr4_1:2840485-2840504 | None:intergenic | 35.0% | |
| CAGTTTACAGGTATATATGC+TGG | - | chr4_1:2841063-2841082 | Msa0529350:intron | 35.0% | |
| ATCCCATGAACAAAGACAAA+AGG | + | chr4_1:2841392-2841411 | None:intergenic | 35.0% | |
| ATATTCACATAAAAGGGACG+AGG | + | chr4_1:2841508-2841527 | None:intergenic | 35.0% | |
| AGAATTGAGAAGTTGGATAG+TGG | + | chr4_1:2841769-2841788 | None:intergenic | 35.0% | |
| TGCTGAAGTTCTTGAAAAGA+TGG | - | chr4_1:2841903-2841922 | Msa0529350:intron | 35.0% | |
| GCTGAAGTTCTTGAAAAGAT+GGG | - | chr4_1:2841904-2841923 | Msa0529350:intron | 35.0% | |
| GAAAACAGTGTAACTGTTAC+CGG | - | chr4_1:2841946-2841965 | Msa0529350:intron | 35.0% | |
| AAAACAGTGTAACTGTTACC+GGG | - | chr4_1:2841947-2841966 | Msa0529350:intron | 35.0% | |
| GTTGTTGCACTATATGCTAA+TGG | - | chr4_1:2842057-2842076 | Msa0529350:intron | 35.0% | |
| ATACCATCTCTAATAGCAGT+GGG | + | chr4_1:2842084-2842103 | None:intergenic | 35.0% | |
| TTCAATAGTCAAGCAAAGCA+GGG | + | chr4_1:2842406-2842425 | None:intergenic | 35.0% | |
| TTTCAATAGTCAAGCAAAGC+AGG | + | chr4_1:2842407-2842426 | None:intergenic | 35.0% | |
| ACCATGTGCGATTGTATTAT+GGG | + | chr4_1:2842462-2842481 | None:intergenic | 35.0% | |
| AACCATGTGCGATTGTATTA+TGG | + | chr4_1:2842463-2842482 | None:intergenic | 35.0% | |
| !! | TTCGAGTGTGATTTAACTTG+AGG | - | chr4_1:2842552-2842571 | Msa0529350:intron | 35.0% |
| ! | GTTTGACTTTCTAACCTCAA+GGG | + | chr4_1:2842736-2842755 | None:intergenic | 35.0% |
| ! | TGTTTGACTTTCTAACCTCA+AGG | + | chr4_1:2842737-2842756 | None:intergenic | 35.0% |
| GTAAAATGTGAACAAAAGGG+GGG | - | chr4_1:2842802-2842821 | Msa0529350:intron | 35.0% | |
| TAAAATGTGAACAAAAGGGG+GGG | - | chr4_1:2842803-2842822 | Msa0529350:intron | 35.0% | |
| ! | TTTTCTCATGTAAGCACAAC+TGG | - | chr4_1:2842834-2842853 | Msa0529350:intron | 35.0% |
| AGACAAAGTATATGTAGCAC+TGG | + | chr4_1:2843034-2843053 | None:intergenic | 35.0% | |
| GATGTGACATTCAATTTCTC+AGG | + | chr4_1:2843494-2843513 | None:intergenic | 35.0% | |
| !!! | GTTGTGAGTATTTTTTGGCT+TGG | - | chr4_1:2843710-2843729 | Msa0529350:five_prime_UTR | 35.0% |
| ! | TATTGGGAGGATTTTGTTGG+GGG | + | chr4_1:2836974-2836993 | None:intergenic | 40.0% |
| ! | GTATTGGGAGGATTTTGTTG+GGG | + | chr4_1:2836975-2836994 | None:intergenic | 40.0% |
| !! | GTATTGGTCTTTGTATTGGG+AGG | + | chr4_1:2836987-2837006 | None:intergenic | 40.0% |
| TCATTGAGGTCAAGCATTTG+GGG | - | chr4_1:2837161-2837180 | Msa0529350:intron | 40.0% | |
| ! | TTTGGGGCTCTTCAAAATCA+TGG | - | chr4_1:2837177-2837196 | Msa0529350:intron | 40.0% |
| ATAGGTTCCAACACAATCTC+CGG | + | chr4_1:2837311-2837330 | None:intergenic | 40.0% | |
| !! | TCTGGAAGTATTACATTGCC+TGG | - | chr4_1:2837341-2837360 | Msa0529350:intron | 40.0% |
| !! | CTGGAAGTATTACATTGCCT+GGG | - | chr4_1:2837342-2837361 | Msa0529350:intron | 40.0% |
| GGTCTAAGTCTTTGTCCAAT+CGG | - | chr4_1:2837363-2837382 | Msa0529350:CDS | 40.0% | |
| AGCTAGAAGCAAAATCCGAT+TGG | + | chr4_1:2837381-2837400 | None:intergenic | 40.0% | |
| !! | ACCTTCATCTCACTTTTAGC+CGG | + | chr4_1:2837649-2837668 | None:intergenic | 40.0% |
| GATAGAATCAATTATGGGGC+AGG | - | chr4_1:2837770-2837789 | Msa0529350:intron | 40.0% | |
| ! | AAATCGATTCTTCCTGAAGC+AGG | + | chr4_1:2838356-2838375 | None:intergenic | 40.0% |
| TGTTTGACTAGGTAGCCTAA+AGG | - | chr4_1:2838390-2838409 | Msa0529350:intron | 40.0% | |
| ! | TATTCCAACACCTAGCCTTT+AGG | + | chr4_1:2838408-2838427 | None:intergenic | 40.0% |
| ACACTTTCATAAACATGGGG+TGG | - | chr4_1:2838609-2838628 | Msa0529350:CDS | 40.0% | |
| AACAACCAAACAAGCTGTTG+TGG | - | chr4_1:2839106-2839125 | Msa0529350:intron | 40.0% | |
| GGAGAAGATGTACTTTGTTG+TGG | + | chr4_1:2839511-2839530 | None:intergenic | 40.0% | |
| AGAATGCACCAAAGGATCAT+CGG | - | chr4_1:2839640-2839659 | Msa0529350:intron | 40.0% | |
| ! | AATTGGTCTCTCTCTCATTC+GGG | + | chr4_1:2839795-2839814 | None:intergenic | 40.0% |
| ! | CAATTGGTCTCTCTCTCATT+CGG | + | chr4_1:2839796-2839815 | None:intergenic | 40.0% |
| CCAGACACTAAATCTCCAAT+TGG | + | chr4_1:2839812-2839831 | None:intergenic | 40.0% | |
| CCAATTGGAGATTTAGTGTC+TGG | - | chr4_1:2839809-2839828 | Msa0529350:CDS | 40.0% | |
| ! | GGAGTGTAAAGCTCTAACTA+AGG | - | chr4_1:2840174-2840193 | Msa0529350:intron | 40.0% |
| ATTATAAAGATGTGGAGGGG+AGG | + | chr4_1:2840202-2840221 | None:intergenic | 40.0% | |
| !! | TAATACACTACGGCCTTGTT+TGG | - | chr4_1:2840230-2840249 | Msa0529350:intron | 40.0% |
| ! | CGAACTGTTTTCTAAGCTCT+CGG | - | chr4_1:2840329-2840348 | Msa0529350:intron | 40.0% |
| AAAACCAAATAGGGCCTGTT+TGG | + | chr4_1:2840437-2840456 | None:intergenic | 40.0% | |
| GTAGAAAGGATATACAGGTG+AGG | + | chr4_1:2840471-2840490 | None:intergenic | 40.0% | |
| ! | TTGGTGACTCGATCCATAAT+AGG | + | chr4_1:2840504-2840523 | None:intergenic | 40.0% |
| !! | GACTTTTGGAGAGAATAAGG+AGG | + | chr4_1:2840597-2840616 | None:intergenic | 40.0% |
| GTACTTGACTGCTTTGCTTA+TGG | - | chr4_1:2840688-2840707 | Msa0529350:CDS | 40.0% | |
| CTCAATCTCAACATCACCAA+GGG | + | chr4_1:2840726-2840745 | None:intergenic | 40.0% | |
| TCTCAATCTCAACATCACCA+AGG | + | chr4_1:2840727-2840746 | None:intergenic | 40.0% | |
| TCGTAGAACACAGTGCTAAT+TGG | - | chr4_1:2840816-2840835 | Msa0529350:intron | 40.0% | |
| CGTAGAACACAGTGCTAATT+GGG | - | chr4_1:2840817-2840836 | Msa0529350:intron | 40.0% | |
| ! | ACTTGTACTTTTGACCTCCA+TGG | + | chr4_1:2840856-2840875 | None:intergenic | 40.0% |
| ! | TGGAGGTCAAAAGTACAAGT+AGG | - | chr4_1:2840856-2840875 | Msa0529350:intron | 40.0% |
| !! | ACCTTCAACAAAAGCATTGC+CGG | + | chr4_1:2840963-2840982 | None:intergenic | 40.0% |
| ! | AGTGCTAGTTACTTTCTAGC+TGG | - | chr4_1:2840992-2841011 | Msa0529350:intron | 40.0% |
| ATGGAACATTGTAGGGACTT+AGG | - | chr4_1:2841363-2841382 | Msa0529350:CDS | 40.0% | |
| CAGCTAAATTACTTGCAACC+TGG | + | chr4_1:2841665-2841684 | None:intergenic | 40.0% | |
| AGATGGGAGCTAAAGTTACA+TGG | - | chr4_1:2841920-2841939 | Msa0529350:intron | 40.0% | |
| CATACCATCTCTAATAGCAG+TGG | + | chr4_1:2842085-2842104 | None:intergenic | 40.0% | |
| CACTGCTATTAGAGATGGTA+TGG | - | chr4_1:2842083-2842102 | Msa0529350:intron | 40.0% | |
| ATTGTGTGAAAATGGTCCAC+TGG | + | chr4_1:2842360-2842379 | None:intergenic | 40.0% | |
| CCATGTGCGATTGTATTATG+GGG | + | chr4_1:2842461-2842480 | None:intergenic | 40.0% | |
| !! | GTGATTTAACTTGAGGAGCT+TGG | - | chr4_1:2842559-2842578 | Msa0529350:intron | 40.0% |
| TATTGGACACCAACACTTGT+AGG | - | chr4_1:2842980-2842999 | Msa0529350:intron | 40.0% | |
| ! | GCACTGGCACTTAAAATTGA+AGG | + | chr4_1:2843018-2843037 | None:intergenic | 40.0% |
| ! | TCTATTTTCCAGTGGCAAGT+TGG | - | chr4_1:2843141-2843160 | Msa0529350:intron | 40.0% |
| AATCTGCACAGAACTCAGAA+AGG | - | chr4_1:2843193-2843212 | Msa0529350:CDS | 40.0% | |
| CAGCGACTTAGAAACTACAA+AGG | + | chr4_1:2843239-2843258 | None:intergenic | 40.0% | |
| TTAACTTAACCCACTTGGGT+TGG | - | chr4_1:2843282-2843301 | Msa0529350:CDS | 40.0% | |
| CTAGGAGCAATAGTTGAAGA+AGG | - | chr4_1:2843443-2843462 | Msa0529350:CDS | 40.0% | |
| ! | GGTGTTATCACACAGTAATC+AGG | + | chr4_1:2843470-2843489 | None:intergenic | 40.0% |
| GTGACATTCAATTTCTCAGG+TGG | + | chr4_1:2843491-2843510 | None:intergenic | 40.0% | |
| TGATGATCATAGAATGGCCA+TGG | - | chr4_1:2843526-2843545 | Msa0529350:five_prime_UTR | 40.0% | |
| ! | AATGTTTTCCTTGTGCAACC+AGG | + | chr4_1:2843599-2843618 | None:intergenic | 40.0% |
| CAAGGACTTGAAAGTAGTCA+GGG | + | chr4_1:2843622-2843641 | None:intergenic | 40.0% | |
| TCAAGGACTTGAAAGTAGTC+AGG | + | chr4_1:2843623-2843642 | None:intergenic | 40.0% | |
| TTGGAAATTGTGATGCGGGT+AGG | - | chr4_1:2837228-2837247 | Msa0529350:intron | 45.0% | |
| TGGAAATTGTGATGCGGGTA+GGG | - | chr4_1:2837229-2837248 | Msa0529350:intron | 45.0% | |
| GGGGAATTCTGTTGTGTTGA+AGG | - | chr4_1:2837250-2837269 | Msa0529350:intron | 45.0% | |
| TTGGACAAAGACTTAGACCC+AGG | + | chr4_1:2837362-2837381 | None:intergenic | 45.0% | |
| TCCGGCTAAAAGTGAGATGA+AGG | - | chr4_1:2837645-2837664 | Msa0529350:intron | 45.0% | |
| ! | CATCTGAAGTCATGATAGGG+CGG | + | chr4_1:2838519-2838538 | None:intergenic | 45.0% |
| ! | CTTGAGGCATTAAAGACCCT+TGG | - | chr4_1:2839062-2839081 | Msa0529350:intron | 45.0% |
| ATCTTCCACACGAAGTCCAA+GGG | + | chr4_1:2839081-2839100 | None:intergenic | 45.0% | |
| ACCAAACAAGCTGTTGTGGA+AGG | - | chr4_1:2839110-2839129 | Msa0529350:intron | 45.0% | |
| TACTGCAATGCGTCCTTTGA+CGG | - | chr4_1:2839193-2839212 | Msa0529350:intron | 45.0% | |
| TTGCTGCAGGTGGAAATACA+AGG | - | chr4_1:2839225-2839244 | Msa0529350:intron | 45.0% | |
| CCAACACTGCTTCAAAACCA+TGG | + | chr4_1:2839279-2839298 | None:intergenic | 45.0% | |
| !!! | CCATGGTTTTGAAGCAGTGT+TGG | - | chr4_1:2839276-2839295 | Msa0529350:intron | 45.0% |
| TCATCACTCCGATGATCCTT+TGG | + | chr4_1:2839651-2839670 | None:intergenic | 45.0% | |
| ! | ATTGGTCTCTCTCTCATTCG+GGG | + | chr4_1:2839794-2839813 | None:intergenic | 45.0% |
| CGAATGAGAGAGAGACCAAT+TGG | - | chr4_1:2839794-2839813 | Msa0529350:CDS | 45.0% | |
| !! | GTGTCTGGTCTTAAGCAACT+TGG | - | chr4_1:2839824-2839843 | Msa0529350:CDS | 45.0% |
| TGTCCACCTGTTCGTATAGT+TGG | - | chr4_1:2839878-2839897 | Msa0529350:CDS | 45.0% | |
| GTCCACCTGTTCGTATAGTT+GGG | - | chr4_1:2839879-2839898 | Msa0529350:CDS | 45.0% | |
| TTCCCAACTATACGAACAGG+TGG | + | chr4_1:2839884-2839903 | None:intergenic | 45.0% | |
| ACCTGTTCGTATAGTTGGGA+AGG | - | chr4_1:2839883-2839902 | Msa0529350:CDS | 45.0% | |
| CCTGTTCGTATAGTTGGGAA+GGG | - | chr4_1:2839884-2839903 | Msa0529350:CDS | 45.0% | |
| TTCGTATAGTTGGGAAGGGA+GGG | - | chr4_1:2839888-2839907 | Msa0529350:CDS | 45.0% | |
| GCACGGATAAATTATCGACG+CGG | + | chr4_1:2839958-2839977 | None:intergenic | 45.0% | |
| TTCGCTTTCCTATACCCACA+TGG | - | chr4_1:2840046-2840065 | Msa0529350:intron | 45.0% | |
| AAATGTGGCCATGTGGGTAT+AGG | + | chr4_1:2840057-2840076 | None:intergenic | 45.0% | |
| ACAGTGAAATGTGGCCATGT+GGG | + | chr4_1:2840063-2840082 | None:intergenic | 45.0% | |
| TACAGTGAAATGTGGCCATG+TGG | + | chr4_1:2840064-2840083 | None:intergenic | 45.0% | |
| ATGAACTTCGCTATTGGGAC+TGG | - | chr4_1:2840152-2840171 | Msa0529350:intron | 45.0% | |
| TGAACTTCGCTATTGGGACT+GGG | - | chr4_1:2840153-2840172 | Msa0529350:intron | 45.0% | |
| CAATCCAAACAGGCCCTATT+TGG | - | chr4_1:2840430-2840449 | Msa0529350:intron | 45.0% | |
| TATTATCCCATCTCGCATGC+AGG | - | chr4_1:2840637-2840656 | Msa0529350:intron | 45.0% | |
| !! | TTGAAGTTGATGGAGCGCTT+TGG | - | chr4_1:2840788-2840807 | Msa0529350:intron | 45.0% |
| AACACAGTGCTAATTGGGAC+AGG | - | chr4_1:2840822-2840841 | Msa0529350:intron | 45.0% | |
| TGCTAATTGGGACAGGTTCT+TGG | - | chr4_1:2840829-2840848 | Msa0529350:intron | 45.0% | |
| AGTAGGTTTCTACGGTTTCG+AGG | - | chr4_1:2840873-2840892 | Msa0529350:intron | 45.0% | |
| ! | GTTTTTCGTATCAGGTCTCC+CGG | - | chr4_1:2840941-2840960 | Msa0529350:intron | 45.0% |
| !! | CCTTCAACAAAAGCATTGCC+GGG | + | chr4_1:2840962-2840981 | None:intergenic | 45.0% |
| AGTTACTGGCGGAACTATCA+CGG | - | chr4_1:2841021-2841040 | Msa0529350:intron | 45.0% | |
| ACTATCACGGTTATAGGCTG+TGG | - | chr4_1:2841034-2841053 | Msa0529350:intron | 45.0% | |
| CTATCACGGTTATAGGCTGT+GGG | - | chr4_1:2841035-2841054 | Msa0529350:intron | 45.0% | |
| TGCAACAACAGCAAGTGTCA+TGG | + | chr4_1:2842046-2842065 | None:intergenic | 45.0% | |
| CCCCATAATACAATCGCACA+TGG | - | chr4_1:2842458-2842477 | Msa0529350:intron | 45.0% | |
| GATTTAAACTCCGTCCCTTG+AGG | - | chr4_1:2842719-2842738 | Msa0529350:intron | 45.0% | |
| GACTTTCTAACCTCAAGGGA+CGG | + | chr4_1:2842732-2842751 | None:intergenic | 45.0% | |
| TCTCATGTAAGCACAACTGG+AGG | - | chr4_1:2842837-2842856 | Msa0529350:intron | 45.0% | |
| GTGTGATGTCCTACAAGTGT+TGG | + | chr4_1:2842992-2843011 | None:intergenic | 45.0% | |
| TTAACTCTCCAACTTGCCAC+TGG | + | chr4_1:2843152-2843171 | None:intergenic | 45.0% | |
| GAATCGAACCTAAGACCTTG+AGG | + | chr4_1:2843346-2843365 | None:intergenic | 45.0% | |
| CTAAACTAGCCCACCCAAAT+TGG | + | chr4_1:2843378-2843397 | None:intergenic | 45.0% | |
| AGCAGCAAGTGAAAATGCCA+TGG | + | chr4_1:2843546-2843565 | None:intergenic | 45.0% | |
| !! | GCATTTTCACTTGCTGCTTG+TGG | - | chr4_1:2843548-2843567 | Msa0529350:five_prime_UTR | 45.0% |
| !!! | TTTTTATTTATTTTATGATT+TGG | + | chr4_1:2837018-2837037 | None:intergenic | 5.0% |
| !!! | GATTTTGTTGGGGGTTGGTG+TGG | + | chr4_1:2836965-2836984 | None:intergenic | 50.0% |
| GGAAATTGTGATGCGGGTAG+GGG | - | chr4_1:2837230-2837249 | Msa0529350:intron | 50.0% | |
| GAAATTGTGATGCGGGTAGG+GGG | - | chr4_1:2837231-2837250 | Msa0529350:intron | 50.0% | |
| ! | GCTTCTAGCTGCTCTATCTG+AGG | - | chr4_1:2837391-2837410 | Msa0529350:CDS | 50.0% |
| TACGCGTGTGTTTGGTTGTG+CGG | - | chr4_1:2837937-2837956 | Msa0529350:intron | 50.0% | |
| CAGGAAATCCTAGCTTCTGC+GGG | + | chr4_1:2838243-2838262 | None:intergenic | 50.0% | |
| GCAGGAAATCCTAGCTTCTG+CGG | + | chr4_1:2838244-2838263 | None:intergenic | 50.0% | |
| GACTAGGTAGCCTAAAGGCT+AGG | - | chr4_1:2838395-2838414 | Msa0529350:intron | 50.0% | |
| GTAGCCTAAAGGCTAGGTGT+TGG | - | chr4_1:2838401-2838420 | Msa0529350:intron | 50.0% | |
| TGCTCGCACACACATGTTTC+TGG | + | chr4_1:2838703-2838722 | None:intergenic | 50.0% | |
| AAAGACCCTTGGACTTCGTG+TGG | - | chr4_1:2839073-2839092 | Msa0529350:intron | 50.0% | |
| CATCTTCCACACGAAGTCCA+AGG | + | chr4_1:2839082-2839101 | None:intergenic | 50.0% | |
| ! | GCCTTCCACAACAGCTTGTT+TGG | + | chr4_1:2839114-2839133 | None:intergenic | 50.0% |
| !! | TTGCAGTACCGGCATTTCCA+AGG | + | chr4_1:2839181-2839200 | None:intergenic | 50.0% |
| CAAAGGACGCATTGCAGTAC+CGG | + | chr4_1:2839192-2839211 | None:intergenic | 50.0% | |
| ATTTCCACCTGCAGCAACCA+AGG | + | chr4_1:2839222-2839241 | None:intergenic | 50.0% | |
| !! | GTTGTAGAGGCGCTATCACA+TGG | - | chr4_1:2839308-2839327 | Msa0529350:intron | 50.0% |
| !! | TAGAGGCGCTATCACATGGT+GGG | - | chr4_1:2839312-2839331 | Msa0529350:intron | 50.0% |
| CCCTTCCCAACTATACGAAC+AGG | + | chr4_1:2839887-2839906 | None:intergenic | 50.0% | |
| GTTCGTATAGTTGGGAAGGG+AGG | - | chr4_1:2839887-2839906 | Msa0529350:CDS | 50.0% | |
| GTTTCACCTGCATGCGAGAT+GGG | + | chr4_1:2840646-2840665 | None:intergenic | 50.0% | |
| AGTTTCACCTGCATGCGAGA+TGG | + | chr4_1:2840647-2840666 | None:intergenic | 50.0% | |
| TTTGCTTATGGCAGCTCCGT+TGG | - | chr4_1:2840700-2840719 | Msa0529350:CDS | 50.0% | |
| TCAACATCACCAAGGGCCAA+CGG | + | chr4_1:2840719-2840738 | None:intergenic | 50.0% | |
| ! | CCCGGCAATGCTTTTGTTGA+AGG | - | chr4_1:2840959-2840978 | Msa0529350:intron | 50.0% |
| GGCGGAACTATCACGGTTAT+AGG | - | chr4_1:2841028-2841047 | Msa0529350:intron | 50.0% | |
| CTGTGGGACAAGCAGTTTAC+AGG | - | chr4_1:2841051-2841070 | Msa0529350:intron | 50.0% | |
| GCAAGTGTCATGGCAACATC+TGG | + | chr4_1:2842036-2842055 | None:intergenic | 50.0% | |
| GGTCCCACTGCTATTAGAGA+TGG | - | chr4_1:2842078-2842097 | Msa0529350:intron | 50.0% | |
| GTCAAGCAAAGCAGGGTTAG+TGG | + | chr4_1:2842399-2842418 | None:intergenic | 50.0% | |
| TCGAACCTAAGACCTTGAGG+AGG | + | chr4_1:2843343-2843362 | None:intergenic | 50.0% | |
| ! | ATTCCCCCTGGTGCCAATTT+GGG | - | chr4_1:2843362-2843381 | Msa0529350:CDS | 50.0% |
| !! | CCAGGATCGTTGATGGTAAC+TGG | + | chr4_1:2843581-2843600 | None:intergenic | 50.0% |
| CCAGTTACCATCAACGATCC+TGG | - | chr4_1:2843578-2843597 | Msa0529350:five_prime_UTR | 50.0% | |
| TGTGCAACCAGGATCGTTGA+TGG | + | chr4_1:2843588-2843607 | None:intergenic | 50.0% | |
| TCAACGATCCTGGTTGCACA+AGG | - | chr4_1:2843588-2843607 | Msa0529350:five_prime_UTR | 50.0% | |
| !! | GGGGTTGGTGTGGTAGTTGT+TGG | + | chr4_1:2836955-2836974 | None:intergenic | 55.0% |
| ! | GGGAGGATTTTGTTGGGGGT+TGG | + | chr4_1:2836970-2836989 | None:intergenic | 55.0% |
| GGTTCCAACACAATCTCCGG+CGG | + | chr4_1:2837308-2837327 | None:intergenic | 55.0% | |
| CGTGTGTTTGGTTGTGCGGT+GGG | - | chr4_1:2837941-2837960 | Msa0529350:intron | 55.0% | |
| GTGTGTTTGGTTGTGCGGTG+GGG | - | chr4_1:2837942-2837961 | Msa0529350:intron | 55.0% | |
| CTTGCTTACCCGCAGAAGCT+AGG | - | chr4_1:2838232-2838251 | Msa0529350:intron | 55.0% | |
| CAAGCTGTTGTGGAAGGCAG+TGG | - | chr4_1:2839116-2839135 | Msa0529350:intron | 55.0% | |
| CTGTTGTGGAAGGCAGTGGT+GGG | - | chr4_1:2839120-2839139 | Msa0529350:intron | 55.0% | |
| !! | GTAGAGGCGCTATCACATGG+TGG | - | chr4_1:2839311-2839330 | Msa0529350:intron | 55.0% |
| CGCATGCAGGTGAAACTGTC+TGG | - | chr4_1:2840650-2840669 | Msa0529350:CDS | 55.0% | |
| TGGGACAGGTTCTTGGTCCA+TGG | - | chr4_1:2840836-2840855 | Msa0529350:intron | 55.0% | |
| GACAGGTTCTTGGTCCATGG+AGG | - | chr4_1:2840839-2840858 | Msa0529350:intron | 55.0% | |
| CTAGCTGGTGCAGCAGTTAC+TGG | - | chr4_1:2841007-2841026 | Msa0529350:intron | 55.0% | |
| TAACTGTTACCGGGCCTCCA+CGG | - | chr4_1:2841956-2841975 | Msa0529350:intron | 55.0% | |
| TCCGGTCGGAAAGTCTTGCA+AGG | - | chr4_1:2841985-2842004 | Msa0529350:intron | 55.0% | |
| GCCTTGCAAGACTTTCCGAC+CGG | + | chr4_1:2841989-2842008 | None:intergenic | 55.0% | |
| !! | TTAACCCACTTGGGTTGGCC+CGG | - | chr4_1:2843287-2843306 | Msa0529350:CDS | 55.0% |
| AGGTCTCAAGCCAACACCAC+CGG | + | chr4_1:2843309-2843328 | None:intergenic | 55.0% | |
| !! | GTGGTGTTGGCTTGAGACCT+TGG | - | chr4_1:2843309-2843328 | Msa0529350:CDS | 55.0% |
| ! | TTGAGGAGGAGCACACTCCA+AGG | + | chr4_1:2843329-2843348 | None:intergenic | 55.0% |
| TTGGAGTGTGCTCCTCCTCA+AGG | - | chr4_1:2843328-2843347 | Msa0529350:CDS | 55.0% | |
| GTGCTCCTCCTCAAGGTCTT+AGG | - | chr4_1:2843335-2843354 | Msa0529350:CDS | 55.0% | |
| GTCTTAGGTTCGATTCCCCC+TGG | - | chr4_1:2843350-2843369 | Msa0529350:CDS | 55.0% | |
| ! | GATTCCCCCTGGTGCCAATT+TGG | - | chr4_1:2843361-2843380 | Msa0529350:CDS | 55.0% |
| GCGTGTGTTTGGTTGTGCGG+TGG | - | chr4_1:2837940-2837959 | Msa0529350:intron | 60.0% | |
| GCTGTTGTGGAAGGCAGTGG+TGG | - | chr4_1:2839119-2839138 | Msa0529350:intron | 60.0% | |
| GCAACCAAGGCTGCCGTCAA+AGG | + | chr4_1:2839209-2839228 | None:intergenic | 60.0% | |
| TTGGGAAGGGAGGGCTTCCA+GGG | - | chr4_1:2839897-2839916 | Msa0529350:intron | 60.0% | |
| GGCTTCCAGGGGGAAAGGTA+AGG | - | chr4_1:2839909-2839928 | Msa0529350:intron | 60.0% | |
| ! | GGTAGCCTTACCTTTCCCCC+TGG | + | chr4_1:2839917-2839936 | None:intergenic | 60.0% |
| GCTGGTGCAGCAGTTACTGG+CGG | - | chr4_1:2841010-2841029 | Msa0529350:intron | 60.0% | |
| AACTGTTACCGGGCCTCCAC+GGG | - | chr4_1:2841957-2841976 | Msa0529350:intron | 60.0% | |
| CTCCACGGGATTCTTCCGGT+CGG | - | chr4_1:2841971-2841990 | Msa0529350:intron | 60.0% | |
| TTCCGACCGGAAGAATCCCG+TGG | + | chr4_1:2841976-2841995 | None:intergenic | 60.0% | |
| GGTCTCAAGCCAACACCACC+GGG | + | chr4_1:2843308-2843327 | None:intergenic | 60.0% | |
| CCACCCAAATTGGCACCAGG+GGG | + | chr4_1:2843368-2843387 | None:intergenic | 60.0% | |
| CCCACCCAAATTGGCACCAG+GGG | + | chr4_1:2843369-2843388 | None:intergenic | 60.0% | |
| ! | CCCCTGGTGCCAATTTGGGT+GGG | - | chr4_1:2843366-2843385 | Msa0529350:CDS | 60.0% |
| GCCCACCCAAATTGGCACCA+GGG | + | chr4_1:2843370-2843389 | None:intergenic | 60.0% | |
| AGCCCACCCAAATTGGCACC+AGG | + | chr4_1:2843371-2843390 | None:intergenic | 60.0% | |
| TGCGCCGCCGGAGATTGTGT+TGG | - | chr4_1:2837301-2837320 | Msa0529350:intron | 65.0% | |
| GCGTCCTTTGACGGCAGCCT+TGG | - | chr4_1:2839202-2839221 | Msa0529350:intron | 65.0% | |
| ACGGCAGCCTTGGTTGCTGC+AGG | - | chr4_1:2839212-2839231 | Msa0529350:intron | 65.0% | |
| GCAGCCTTGGTTGCTGCAGG+TGG | - | chr4_1:2839215-2839234 | Msa0529350:intron | 65.0% | |
| GTTGGGAAGGGAGGGCTTCC+AGG | - | chr4_1:2839896-2839915 | Msa0529350:intron | 65.0% | |
| TGGGAAGGGAGGGCTTCCAG+GGG | - | chr4_1:2839898-2839917 | Msa0529350:intron | 65.0% | |
| ATGGCAGCTCCGTTGGCCCT+TGG | - | chr4_1:2840707-2840726 | Msa0529350:CDS | 65.0% | |
| GGAAGAATCCCGTGGAGGCC+CGG | + | chr4_1:2841968-2841987 | None:intergenic | 65.0% | |
| GGGCCTCCACGGGATTCTTC+CGG | - | chr4_1:2841967-2841986 | Msa0529350:intron | 65.0% | |
| CGACCGGAAGAATCCCGTGG+AGG | + | chr4_1:2841973-2841992 | None:intergenic | 65.0% | |
| ACCACCGGGCCAACCCAAGT+GGG | + | chr4_1:2843294-2843313 | None:intergenic | 65.0% | |
| !! | TTGGGTTGGCCCGGTGGTGT+TGG | - | chr4_1:2843296-2843315 | Msa0529350:CDS | 65.0% |
| ! | CCCCCTGGTGCCAATTTGGG+TGG | - | chr4_1:2843365-2843384 | Msa0529350:CDS | 65.0% |
| GGGAAGGGAGGGCTTCCAGG+GGG | - | chr4_1:2839899-2839918 | Msa0529350:intron | 70.0% | |
| GGGAGGGCTTCCAGGGGGAA+AGG | - | chr4_1:2839904-2839923 | Msa0529350:intron | 70.0% | |
| !! | ACCCACTTGGGTTGGCCCGG+TGG | - | chr4_1:2843290-2843309 | Msa0529350:CDS | 70.0% |
| CACCACCGGGCCAACCCAAG+TGG | + | chr4_1:2843295-2843314 | None:intergenic | 70.0% | |
| TGCTGCTGCTGCTGCGCCGC+CGG | - | chr4_1:2837289-2837308 | Msa0529350:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 2836784 | 2843783 | 2836784 | ID=Msa0529350;Name=Msa0529350 |
| chr4_1 | mRNA | 2836784 | 2843783 | 2836784 | ID=Msa0529350-mRNA-1;Parent=Msa0529350;Name=Msa0529350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=281|1|1|1|1|1|8|122|520 |
| chr4_1 | exon | 2836784 | 2837124 | 2836784 | ID=Msa0529350-mRNA-1:exon:796;Parent=Msa0529350-mRNA-1 |
| chr4_1 | exon | 2837353 | 2837414 | 2837353 | ID=Msa0529350-mRNA-1:exon:795;Parent=Msa0529350-mRNA-1 |
| chr4_1 | exon | 2838468 | 2838678 | 2838468 | ID=Msa0529350-mRNA-1:exon:794;Parent=Msa0529350-mRNA-1 |
| chr4_1 | exon | 2839495 | 2839612 | 2839495 | ID=Msa0529350-mRNA-1:exon:793;Parent=Msa0529350-mRNA-1 |
| chr4_1 | exon | 2839694 | 2839908 | 2839694 | ID=Msa0529350-mRNA-1:exon:792;Parent=Msa0529350-mRNA-1 |
| chr4_1 | exon | 2840642 | 2840795 | 2840642 | ID=Msa0529350-mRNA-1:exon:791;Parent=Msa0529350-mRNA-1 |
| chr4_1 | exon | 2841321 | 2841556 | 2841321 | ID=Msa0529350-mRNA-1:exon:790;Parent=Msa0529350-mRNA-1 |
| chr4_1 | exon | 2843155 | 2843783 | 2843155 | ID=Msa0529350-mRNA-1:exon:789;Parent=Msa0529350-mRNA-1 |
| chr4_1 | five_prime_UTR | 2843503 | 2843783 | 2843503 | ID=Msa0529350-mRNA-1:five_prime_utr;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2843155 | 2843502 | 2843155 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2841321 | 2841556 | 2841321 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2840642 | 2840795 | 2840642 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2839694 | 2839908 | 2839694 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2839495 | 2839612 | 2839495 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2838468 | 2838678 | 2838468 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2837353 | 2837414 | 2837353 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | CDS | 2836906 | 2837124 | 2836906 | ID=Msa0529350-mRNA-1:cds;Parent=Msa0529350-mRNA-1 |
| chr4_1 | three_prime_UTR | 2836784 | 2836905 | 2836784 | ID=Msa0529350-mRNA-1:three_prime_utr;Parent=Msa0529350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
