Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852980 | XP_003615587.1 | 94.040 | 604 | 36 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852980 | sp|A7LXU3|BGH3B_BACO1 | 30.508 | 649 | 373 | 19 | 12 | 604 | 35 | 661 | 9.74e-82 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852980 | G7K6A7 | 94.040 | 604 | 36 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1182 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0756410 | Msa0852980 | -0.810168 | 1.317882e-50 | -8.615850e-47 |
| Msa0835580 | Msa0852980 | -0.833080 | 6.549503e-56 | -8.615850e-47 |
| Msa0410960 | Msa0852980 | -0.815486 | 9.018696e-52 | -8.615850e-47 |
| Msa0503620 | Msa0852980 | -0.805848 | 1.095001e-49 | -8.615850e-47 |
| Msa0565530 | Msa0852980 | -0.818864 | 1.569003e-52 | -8.615850e-47 |
| Msa0852980 | Msa1009170 | -0.805406 | 1.355914e-49 | -8.615850e-47 |
| Msa0852980 | Msa1109890 | 0.812376 | 4.374840e-51 | -8.615850e-47 |
| Msa0852980 | Msa1208250 | -0.803187 | 3.928630e-49 | -8.615850e-47 |
| Msa0852980 | Msa1336460 | 0.939228 | 1.807974e-99 | -8.615850e-47 |
| Msa0852980 | Msa1357380 | -0.805320 | 1.412922e-49 | -8.615850e-47 |
| Msa0852980 | Msa1366700 | -0.805234 | 1.472706e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852980 | MtrunA17_Chr5g0429581 | 94.040 | 604 | 36 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1182 |
| Msa0852980 | MtrunA17_Chr5g0429541 | 89.901 | 604 | 47 | 1 | 1 | 604 | 1 | 590 | 0.0 | 1122 |
| Msa0852980 | MtrunA17_Chr3g0104081 | 74.876 | 605 | 150 | 2 | 1 | 605 | 18 | 620 | 0.0 | 949 |
| Msa0852980 | MtrunA17_Chr6g0461191 | 55.316 | 602 | 256 | 5 | 5 | 601 | 28 | 621 | 0.0 | 685 |
| Msa0852980 | MtrunA17_Chr6g0461221 | 55.075 | 601 | 257 | 5 | 5 | 600 | 29 | 621 | 0.0 | 673 |
| Msa0852980 | MtrunA17_Chr3g0118971 | 54.500 | 600 | 268 | 4 | 5 | 603 | 28 | 623 | 0.0 | 671 |
| Msa0852980 | MtrunA17_Chr6g0461211 | 55.574 | 601 | 254 | 5 | 5 | 600 | 28 | 620 | 0.0 | 670 |
| Msa0852980 | MtrunA17_Chr2g0292341 | 54.606 | 597 | 266 | 4 | 5 | 600 | 30 | 622 | 0.0 | 663 |
| Msa0852980 | MtrunA17_Chr6g0461231 | 53.910 | 601 | 264 | 5 | 5 | 600 | 28 | 620 | 0.0 | 659 |
| Msa0852980 | MtrunA17_Chr7g0253561 | 53.177 | 598 | 275 | 4 | 5 | 601 | 4 | 597 | 0.0 | 654 |
| Msa0852980 | MtrunA17_Chr7g0253551 | 51.016 | 443 | 209 | 2 | 5 | 447 | 29 | 463 | 2.62e-163 | 474 |
| Msa0852980 | MtrunA17_Chr5g0425531 | 25.493 | 659 | 368 | 25 | 5 | 604 | 50 | 644 | 3.97e-38 | 150 |
| Msa0852980 | MtrunA17_Chr5g0425451 | 25.613 | 652 | 373 | 26 | 5 | 604 | 50 | 641 | 5.65e-37 | 147 |
| Msa0852980 | MtrunA17_Chr5g0425431 | 25.153 | 652 | 376 | 25 | 5 | 604 | 48 | 639 | 7.94e-37 | 146 |
| Msa0852980 | MtrunA17_Chr5g0425471 | 26.162 | 581 | 342 | 23 | 86 | 604 | 86 | 641 | 6.49e-36 | 144 |
| Msa0852980 | MtrunA17_Chr3g0115601 | 25.610 | 656 | 364 | 25 | 5 | 602 | 44 | 633 | 7.80e-36 | 143 |
| Msa0852980 | MtrunA17_Chr7g0269871 | 26.806 | 526 | 308 | 23 | 93 | 573 | 86 | 579 | 2.81e-33 | 135 |
| Msa0852980 | MtrunA17_Chr4g0050591 | 26.557 | 610 | 337 | 26 | 5 | 573 | 54 | 593 | 3.25e-32 | 132 |
| Msa0852980 | MtrunA17_Chr1g0194841 | 25.436 | 574 | 333 | 24 | 93 | 604 | 81 | 621 | 1.96e-30 | 127 |
| Msa0852980 | MtrunA17_Chr2g0278761 | 26.616 | 526 | 328 | 22 | 85 | 573 | 90 | 594 | 9.95e-28 | 119 |
| Msa0852980 | MtrunA17_Chr1g0207281 | 25.043 | 587 | 350 | 28 | 85 | 608 | 89 | 648 | 2.25e-27 | 117 |
| Msa0852980 | MtrunA17_Chr2g0294751 | 25.750 | 567 | 352 | 23 | 86 | 603 | 77 | 623 | 9.38e-27 | 115 |
| Msa0852980 | MtrunA17_Chr5g0411571 | 24.165 | 629 | 337 | 26 | 5 | 573 | 42 | 590 | 6.89e-26 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0852980 | AT3G47000.1 | 69.231 | 598 | 180 | 3 | 4 | 600 | 9 | 603 | 0.0 | 870 |
| Msa0852980 | AT3G47010.1 | 66.889 | 601 | 195 | 3 | 4 | 603 | 10 | 607 | 0.0 | 850 |
| Msa0852980 | AT3G47040.4 | 66.944 | 602 | 195 | 3 | 4 | 604 | 9 | 607 | 0.0 | 849 |
| Msa0852980 | AT3G47010.2 | 66.722 | 601 | 195 | 4 | 4 | 603 | 10 | 606 | 0.0 | 845 |
| Msa0852980 | AT3G47050.1 | 68.053 | 601 | 180 | 5 | 4 | 600 | 9 | 601 | 0.0 | 836 |
| Msa0852980 | AT3G47040.1 | 64.274 | 627 | 195 | 4 | 4 | 604 | 9 | 632 | 0.0 | 835 |
| Msa0852980 | AT3G47040.2 | 62.047 | 635 | 204 | 6 | 4 | 604 | 9 | 640 | 0.0 | 799 |
| Msa0852980 | AT5G04885.3 | 54.348 | 598 | 267 | 5 | 4 | 600 | 29 | 621 | 0.0 | 672 |
| Msa0852980 | AT5G04885.1 | 54.348 | 598 | 267 | 5 | 4 | 600 | 29 | 621 | 0.0 | 672 |
| Msa0852980 | AT5G04885.2 | 54.348 | 598 | 267 | 5 | 4 | 600 | 46 | 638 | 0.0 | 671 |
| Msa0852980 | AT3G47000.3 | 70.814 | 442 | 128 | 1 | 4 | 445 | 9 | 449 | 0.0 | 670 |
| Msa0852980 | AT3G47010.4 | 67.873 | 442 | 141 | 1 | 4 | 445 | 10 | 450 | 0.0 | 645 |
| Msa0852980 | AT3G47040.3 | 67.647 | 442 | 142 | 1 | 4 | 445 | 9 | 449 | 0.0 | 644 |
| Msa0852980 | AT3G47000.2 | 69.626 | 428 | 127 | 2 | 174 | 600 | 1 | 426 | 0.0 | 637 |
| Msa0852980 | AT5G20950.3 | 52.596 | 597 | 277 | 5 | 5 | 600 | 104 | 695 | 0.0 | 630 |
| Msa0852980 | AT5G20950.2 | 52.596 | 597 | 277 | 5 | 5 | 600 | 26 | 617 | 0.0 | 629 |
| Msa0852980 | AT5G20950.1 | 52.596 | 597 | 277 | 5 | 5 | 600 | 26 | 617 | 0.0 | 629 |
| Msa0852980 | AT3G47010.3 | 66.357 | 431 | 141 | 3 | 174 | 603 | 1 | 428 | 0.0 | 615 |
| Msa0852980 | AT5G20940.1 | 51.082 | 601 | 284 | 6 | 2 | 600 | 29 | 621 | 0.0 | 600 |
| Msa0852980 | AT3G47050.2 | 67.639 | 377 | 115 | 2 | 4 | 377 | 9 | 381 | 0.0 | 538 |
| Msa0852980 | AT3G62710.1 | 46.264 | 629 | 287 | 14 | 5 | 600 | 38 | 648 | 1.60e-180 | 526 |
| Msa0852980 | AT1G02640.1 | 26.471 | 578 | 333 | 24 | 86 | 602 | 80 | 626 | 1.33e-31 | 131 |
| Msa0852980 | AT5G64570.1 | 25.329 | 608 | 346 | 23 | 5 | 573 | 59 | 597 | 6.59e-30 | 125 |
| Msa0852980 | AT5G49360.1 | 24.841 | 628 | 380 | 24 | 12 | 602 | 56 | 628 | 9.41e-30 | 125 |
| Msa0852980 | AT3G19620.1 | 24.502 | 653 | 377 | 29 | 5 | 604 | 41 | 630 | 5.03e-29 | 123 |
| Msa0852980 | AT5G09730.1 | 24.277 | 622 | 363 | 21 | 5 | 587 | 49 | 601 | 5.18e-28 | 120 |
| Msa0852980 | AT1G78060.1 | 25.564 | 532 | 330 | 21 | 86 | 573 | 74 | 583 | 1.53e-26 | 115 |
| Msa0852980 | AT5G10560.1 | 24.483 | 629 | 346 | 25 | 5 | 573 | 42 | 601 | 2.38e-26 | 115 |
| Msa0852980 | AT5G64570.3 | 24.434 | 618 | 359 | 23 | 5 | 583 | 59 | 607 | 6.64e-26 | 112 |
Find 152 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATGACTTCTTATGTTTC+AGG | 0.158804 | 5_4:+44426758 | Msa0852980:CDS |
| TCCTTATTCCCTCTTGGTTA+TGG | 0.162124 | 5_4:+44429658 | Msa0852980:CDS |
| TTCTTAGCAGTTGCACTATT+TGG | 0.179068 | 5_4:-44426081 | None:intergenic |
| GAACTTGTAATCCCATTTAA+TGG | 0.213541 | 5_4:+44429376 | Msa0852980:CDS |
| CCTTATTCCCTCTTGGTTAT+GGG | 0.218882 | 5_4:+44429659 | Msa0852980:CDS |
| ACAATTCCAGCTCCATTAAA+TGG | 0.228949 | 5_4:-44429388 | None:intergenic |
| ATGAATTGTTCATATCTTAA+AGG | 0.230899 | 5_4:-44427692 | None:intergenic |
| GGAACAAAGTTCATAAATTA+AGG | 0.234620 | 5_4:+44425690 | Msa0852980:five_prime_UTR |
| TCATTACGTTCTATGAATTC+TGG | 0.242355 | 5_4:-44429289 | None:intergenic |
| AATTTCAGGCACAACTATAT+TGG | 0.253170 | 5_4:+44429207 | Msa0852980:intron |
| AGCAAAGATCTGTCAGTTAA+AGG | 0.273779 | 5_4:-44427824 | None:intergenic |
| TAGTAACAGAACGTTCAATT+TGG | 0.293059 | 5_4:-44425903 | None:intergenic |
| ACCAATGGTGAAATCTTTAA+TGG | 0.307869 | 5_4:-44425935 | None:intergenic |
| GCATCAGTACAATAAATTAT+TGG | 0.314084 | 5_4:-44426177 | None:intergenic |
| CCCATAACCAAGAGGGAATA+AGG | 0.318108 | 5_4:-44429659 | None:intergenic |
| TTTAAGATATGAACAATTCA+TGG | 0.320591 | 5_4:+44427694 | Msa0852980:CDS |
| ACAAGCTGTTTCAACCATTA+TGG | 0.332210 | 5_4:+44427086 | Msa0852980:CDS |
| GGAGATGGAGGTACAGAAAA+AGG | 0.336684 | 5_4:+44426985 | Msa0852980:CDS |
| TTTAACTGACAGATCTTTGC+TGG | 0.339407 | 5_4:+44427826 | Msa0852980:CDS |
| ACACTTGTGATTCTAATATC+TGG | 0.340592 | 5_4:+44429436 | Msa0852980:CDS |
| GATGAATTATGTCAACCTTA+TGG | 0.341677 | 5_4:+44427526 | Msa0852980:CDS |
| GGATGGACATTTACTAAGTA+TGG | 0.343875 | 5_4:+44428937 | Msa0852980:CDS |
| GGTTGTTCCATTTCACCATT+TGG | 0.349461 | 5_4:+44425711 | Msa0852980:five_prime_UTR |
| CATGTCAATTCCAGCATTAA+TGG | 0.351444 | 5_4:-44427578 | None:intergenic |
| TAATTTATGAACTTTGTTCC+AGG | 0.354760 | 5_4:-44425687 | None:intergenic |
| AGTCATGTCTTGGACAATTT+CGG | 0.358561 | 5_4:-44426744 | None:intergenic |
| CACGGTAACAATAACGTCTA+TGG | 0.361228 | 5_4:+44426204 | Msa0852980:CDS |
| GTCATCTGATTGGGCTGATA+TGG | 0.362204 | 5_4:+44426110 | Msa0852980:CDS |
| GGAACTCATGCTGATGATAT+CGG | 0.371576 | 5_4:+44428901 | Msa0852980:CDS |
| GCCTACCTCCCAGCCACAAA+TGG | 0.372066 | 5_4:-44426821 | None:intergenic |
| CTCTTGGCGTTCTTATTCAA+TGG | 0.379608 | 5_4:-44428865 | None:intergenic |
| AGGGGCTACCCATTTGTGGC+TGG | 0.380723 | 5_4:+44426812 | Msa0852980:CDS |
| AGGTCTGCAAAGATCCTAGA+TGG | 0.390671 | 5_4:+44426690 | Msa0852980:intron |
| TCTAATATCTGGAAGACCTT+TGG | 0.393745 | 5_4:+44429447 | Msa0852980:CDS |
| GCCAAGAGAATCCTTGTTGC+TGG | 0.408515 | 5_4:+44428880 | Msa0852980:CDS |
| ATCTGGAAGACCTTTGGTCT+TGG | 0.409437 | 5_4:+44429453 | Msa0852980:CDS |
| GGGGCTACCCATTTGTGGCT+GGG | 0.413579 | 5_4:+44426813 | Msa0852980:CDS |
| CTTGTTGCGGCATGGTTGCC+TGG | 0.414148 | 5_4:+44429505 | Msa0852980:CDS |
| TTAGCAGTTGCACTATTTGG+TGG | 0.417251 | 5_4:-44426078 | None:intergenic |
| GATGACTCCTTATTCCCTCT+TGG | 0.417510 | 5_4:+44429652 | Msa0852980:CDS |
| GAAAGAAAAGCTAGGCTTCA+AGG | 0.425811 | 5_4:+44427173 | Msa0852980:CDS |
| GGAATCACAGATGTTATCTT+CGG | 0.427323 | 5_4:+44429541 | Msa0852980:CDS |
| GCATCATCAATCCTGGCTAT+TGG | 0.427539 | 5_4:-44427752 | None:intergenic |
| CATGAATTCACTCCTTCAAC+AGG | 0.428141 | 5_4:-44429628 | None:intergenic |
| GCCATTAAAGATTTCACCAT+TGG | 0.428169 | 5_4:+44425934 | Msa0852980:CDS |
| CTTCGGGGATCATGACTTCA+AGG | 0.430718 | 5_4:+44429558 | Msa0852980:CDS |
| AGAAGGAAGTGTCATCTGAT+TGG | 0.432915 | 5_4:+44426100 | Msa0852980:CDS |
| CGAGCTTCAACCGTTTCAGC+AGG | 0.434983 | 5_4:-44425826 | None:intergenic |
| GTTCTATGAATTCTGGTGTT+GGG | 0.439975 | 5_4:-44429282 | None:intergenic |
| GTAATCCCATTTAATGGAGC+TGG | 0.440659 | 5_4:+44429382 | Msa0852980:CDS |
| AGTAACAGAACGTTCAATTT+GGG | 0.442472 | 5_4:-44425902 | None:intergenic |
| GAATCACAGATGTTATCTTC+GGG | 0.443316 | 5_4:+44429542 | Msa0852980:CDS |
| CAATTCCAGCTCCATTAAAT+GGG | 0.449727 | 5_4:-44429387 | None:intergenic |
| ATGACTTTGAAAGAGAAGAT+TGG | 0.449827 | 5_4:+44425871 | Msa0852980:CDS |
| TCATAGCATCTTCCCCATCT+AGG | 0.450563 | 5_4:-44426704 | None:intergenic |
| TATTGTACTGATGCTATTCA+CGG | 0.453578 | 5_4:+44426186 | Msa0852980:CDS |
| AACTATATTGGATGCTGCTA+AGG | 0.453736 | 5_4:+44429219 | Msa0852980:CDS |
| TTTCCTCACAACGTTGGCCT+CGG | 0.456574 | 5_4:+44426237 | Msa0852980:CDS |
| GAAGGAAGTGTCATCTGATT+GGG | 0.460679 | 5_4:+44426101 | Msa0852980:CDS |
| CAGCTTGATCAACCTGTTGA+AGG | 0.461725 | 5_4:+44429616 | Msa0852980:CDS |
| AATGGAATGAAAGGTTTACT+AGG | 0.464263 | 5_4:-44428847 | None:intergenic |
| AAATAGTGCAACTGCTAAGA+AGG | 0.470452 | 5_4:+44426083 | Msa0852980:CDS |
| GTTGGCATCTCTAGTTCAAT+CGG | 0.474211 | 5_4:+44427721 | Msa0852980:CDS |
| TTGATGTCCAAATGGTGAAA+TGG | 0.475445 | 5_4:-44425718 | None:intergenic |
| TGCTAAGGATGCTGTGGGAC+AGG | 0.475726 | 5_4:+44429234 | Msa0852980:CDS |
| TGAAGCAGTTCGAAAGTCCT+TGG | 0.476629 | 5_4:+44428801 | Msa0852980:CDS |
| GATATTAGAATCACAAGTGT+TGG | 0.476636 | 5_4:-44429433 | None:intergenic |
| TTCTTATTCAATGGAATGAA+AGG | 0.484516 | 5_4:-44428856 | None:intergenic |
| GAACTCATGCTGATGATATC+GGG | 0.485480 | 5_4:+44428902 | Msa0852980:CDS |
| TCCAAGGGGCTACCCATTTG+TGG | 0.486656 | 5_4:+44426808 | Msa0852980:CDS |
| TCTAGTGGCCAGATCACAAT+TGG | 0.486949 | 5_4:+44428961 | Msa0852980:CDS |
| GTCTCATATTCCAGCTGGAA+TGG | 0.487762 | 5_4:+44427108 | Msa0852980:CDS |
| TCACCTCCACACTCAGCATA+GGG | 0.490280 | 5_4:-44429346 | None:intergenic |
| CGTTCTATGAATTCTGGTGT+TGG | 0.490481 | 5_4:-44429283 | None:intergenic |
| ATATTAGAATCACAAGTGTT+GGG | 0.490789 | 5_4:-44429432 | None:intergenic |
| ACTCTTCTAAACCAAGTCAT+TGG | 0.496062 | 5_4:-44429589 | None:intergenic |
| GCCACAAATGGGTAGCCCCT+TGG | 0.496947 | 5_4:-44426809 | None:intergenic |
| TCCAGCAACAAGGATTCTCT+TGG | 0.497425 | 5_4:-44428881 | None:intergenic |
| AATTTATGAACTTTGTTCCA+GGG | 0.498816 | 5_4:-44425686 | None:intergenic |
| TTGGCATCTCTAGTTCAATC+GGG | 0.500138 | 5_4:+44427722 | Msa0852980:CDS |
| ATTCCATTTCCTTCACTACC+AGG | 0.500207 | 5_4:-44429523 | None:intergenic |
| GATCCACATGGCCCCGTATG+TGG | 0.501410 | 5_4:+44427053 | Msa0852980:CDS |
| AAGGCTAACCAATTGTGATC+TGG | 0.501758 | 5_4:-44428969 | None:intergenic |
| GATTGGGCTGATATGGTTGA+CGG | 0.503500 | 5_4:+44426117 | Msa0852980:CDS |
| AAACATAAGAAGTCATGTCT+TGG | 0.503886 | 5_4:-44426754 | None:intergenic |
| CTCAACGGCATCATCAATCC+TGG | 0.505700 | 5_4:-44427759 | None:intergenic |
| TTATGGTCTCATATTCCAGC+TGG | 0.513411 | 5_4:+44427103 | Msa0852980:CDS |
| ATATCTACTTCCATTAATGC+TGG | 0.513950 | 5_4:+44427568 | Msa0852980:CDS |
| TAACGATAATCTGAACCATA+AGG | 0.514827 | 5_4:-44427541 | None:intergenic |
| CTGGCGCTTGAATCACGGTT+AGG | 0.517230 | 5_4:+44426150 | Msa0852980:CDS |
| AGATCTTTGCTGGATACTGT+TGG | 0.518240 | 5_4:+44427836 | Msa0852980:CDS |
| CCTACCTCCCAGCCACAAAT+GGG | 0.519639 | 5_4:-44426820 | None:intergenic |
| GCTGGATACTGTTGGTTGCA+AGG | 0.519750 | 5_4:+44427844 | Msa0852980:CDS |
| GAGTTTGACTCCATTCCAGC+TGG | 0.521515 | 5_4:-44427118 | None:intergenic |
| TATAATAAAAGTGCATGCCC+TGG | 0.522855 | 5_4:+44425669 | Msa0852980:five_prime_UTR |
| TCACTTGAACTTAGAGCAAG+TGG | 0.523247 | 5_4:+44426519 | Msa0852980:CDS |
| TGAACAATTCATGGAAGAGT+TGG | 0.524007 | 5_4:+44427703 | Msa0852980:CDS |
| TTTGTGATTTCTGACTGGGA+GGG | 0.536472 | 5_4:+44427499 | Msa0852980:CDS |
| AGGGTAAACTACCAATGACT+TGG | 0.544683 | 5_4:+44429578 | Msa0852980:CDS |
| CTGCAGAGTTGATGTCCAAA+TGG | 0.545198 | 5_4:-44425726 | None:intergenic |
| GTTCTATACAATCCACATAC+GGG | 0.546133 | 5_4:-44427065 | None:intergenic |
| GCTGGAATATGAGACCATAA+TGG | 0.546993 | 5_4:-44427100 | None:intergenic |
| AACCTCCAGAAAATCATCCA+AGG | 0.549496 | 5_4:+44426792 | Msa0852980:CDS |
| TGTTCTATACAATCCACATA+CGG | 0.551403 | 5_4:-44427066 | None:intergenic |
| TCTTATGTTTCAGGTTTGCA+AGG | 0.552090 | 5_4:+44426767 | Msa0852980:CDS |
| GTGAAATCTTTAATGGCAGA+AGG | 0.554246 | 5_4:-44425928 | None:intergenic |
| TCAAAGTCATAAGAGAAAGA+AGG | 0.555741 | 5_4:-44425858 | None:intergenic |
| TCGGGTATCAATGTGGAGGA+TGG | 0.556709 | 5_4:+44428920 | Msa0852980:CDS |
| CATTAATGCTGGAATTGACA+TGG | 0.559007 | 5_4:+44427579 | Msa0852980:CDS |
| GGATGCTGCTAAGGATGCTG+TGG | 0.564728 | 5_4:+44429228 | Msa0852980:CDS |
| GTATATGAATCCTGCTGAAA+CGG | 0.566527 | 5_4:+44425816 | Msa0852980:CDS |
| TTGCCTGGTAGTGAAGGAAA+TGG | 0.568579 | 5_4:+44429520 | Msa0852980:CDS |
| TCCAACAAAATGTCTAGCAC+AGG | 0.571832 | 5_4:-44426965 | None:intergenic |
| TAGAAGCTCTTGTTGCGGCA+TGG | 0.572751 | 5_4:+44429497 | Msa0852980:CDS |
| GGCTTCACCAATAGCAACAA+TGG | 0.575663 | 5_4:-44429323 | None:intergenic |
| CAAGAACTAAGTCAGTTACA+TGG | 0.580003 | 5_4:+44425786 | Msa0852980:exon |
| AGAAGCTGGCGCTTGAATCA+CGG | 0.580598 | 5_4:+44426145 | Msa0852980:CDS |
| CACTCTTAAAATCCGCTCAA+CGG | 0.581745 | 5_4:-44427774 | None:intergenic |
| GCTACCCATTTGTGGCTGGG+AGG | 0.583997 | 5_4:+44426816 | Msa0852980:CDS |
| GGTCTGCAAAGATCCTAGAT+GGG | 0.587399 | 5_4:+44426691 | Msa0852980:intron |
| CAGCATGAGTTCCAGCAACA+AGG | 0.588717 | 5_4:-44428891 | None:intergenic |
| ACCTCCAGAAAATCATCCAA+GGG | 0.588939 | 5_4:+44426793 | Msa0852980:CDS |
| GTCACCTCCACACTCAGCAT+AGG | 0.590732 | 5_4:-44429347 | None:intergenic |
| GCTCCGAGGCCAACGTTGTG+AGG | 0.591912 | 5_4:-44426240 | None:intergenic |
| ACTATATTTCCTCACAACGT+TGG | 0.594556 | 5_4:+44426231 | Msa0852980:CDS |
| TTTACTAAGTATGGATCTAG+TGG | 0.597699 | 5_4:+44428946 | Msa0852980:CDS |
| ACCTCCACACTCAGCATAGG+GGG | 0.603901 | 5_4:-44429344 | None:intergenic |
| AAACTTTGTTCCAAGACCAA+AGG | 0.610030 | 5_4:-44429463 | None:intergenic |
| TGGAATGGAGTCAAACTCCA+TGG | 0.613942 | 5_4:+44427123 | Msa0852980:CDS |
| ACGTTGGCCTCGGAGCAACT+AGG | 0.636583 | 5_4:+44426247 | Msa0852980:CDS |
| AAGCTAGCCCATAACCAAGA+GGG | 0.637396 | 5_4:-44429666 | None:intergenic |
| GCATGGTTGCCTGGTAGTGA+AGG | 0.640507 | 5_4:+44429514 | Msa0852980:CDS |
| AATCCACATACGGGGCCATG+TGG | 0.640866 | 5_4:-44427056 | None:intergenic |
| GGATTGATGATGCCGTTGAG+CGG | 0.645720 | 5_4:+44427762 | Msa0852980:CDS |
| AGATGCCTTACAGATACACT+AGG | 0.649143 | 5_4:-44426561 | None:intergenic |
| TGGCATCTCTAGTTCAATCG+GGG | 0.650471 | 5_4:+44427723 | Msa0852980:CDS |
| TAATCAGAAATCGATGACCA+TGG | 0.652717 | 5_4:-44427140 | None:intergenic |
| CACCTCCACACTCAGCATAG+GGG | 0.652884 | 5_4:-44429345 | None:intergenic |
| TTCGGGGATCATGACTTCAA+GGG | 0.656885 | 5_4:+44429559 | Msa0852980:CDS |
| GTCTGCAAAGATCCTAGATG+GGG | 0.658282 | 5_4:+44426692 | Msa0852980:CDS |
| TTCAGCAGGATTCATATACA+CGG | 0.662584 | 5_4:-44425812 | None:intergenic |
| GGCATCTCTAGTTCAATCGG+GGG | 0.673392 | 5_4:+44427724 | Msa0852980:CDS |
| GATGCTGCTAAGGATGCTGT+GGG | 0.685349 | 5_4:+44429229 | Msa0852980:CDS |
| AATCACAGATGTTATCTTCG+GGG | 0.692931 | 5_4:+44429543 | Msa0852980:CDS |
| TAAGCTAGCCCATAACCAAG+AGG | 0.693183 | 5_4:-44429667 | None:intergenic |
| TTCTATACAATCCACATACG+GGG | 0.694901 | 5_4:-44427064 | None:intergenic |
| AAAAGTAGAAGCTCTTGTTG+CGG | 0.696874 | 5_4:+44429492 | Msa0852980:CDS |
| GATGATATCGGGTATCAATG+TGG | 0.699497 | 5_4:+44428913 | Msa0852980:CDS |
| CCTCCAGAAAATCATCCAAG+GGG | 0.706643 | 5_4:+44426794 | Msa0852980:CDS |
| GATATCGGGTATCAATGTGG+AGG | 0.736689 | 5_4:+44428916 | Msa0852980:CDS |
| ACACAAACCTAGTTGCTCCG+AGG | 0.747671 | 5_4:-44426254 | None:intergenic |
| AGACTTAGAGAAGATCCACA+TGG | 0.753967 | 5_4:+44427041 | Msa0852980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATAAGAAACTTT+CGG | - | chr5_4:44425645-44425664 | None:intergenic | 10.0% |
| !!! | AAGTATTGATTTTTTTAAAA+CGG | - | chr5_4:44426873-44426892 | None:intergenic | 10.0% |
| !! | AAAGATACAAAAAAATAAAA+AGG | - | chr5_4:44428991-44429010 | None:intergenic | 10.0% |
| !! | AAAAAAAAATAAGAAACTTT+CGG | - | chr5_4:44425645-44425664 | None:intergenic | 10.0% |
| !!! | AAGTATTGATTTTTTTAAAA+CGG | - | chr5_4:44426873-44426892 | None:intergenic | 10.0% |
| !! | AAAGATACAAAAAAATAAAA+AGG | - | chr5_4:44428991-44429010 | None:intergenic | 10.0% |
| !! | AATCTATGTTAAAATACTAT+GGG | - | chr5_4:44427620-44427639 | None:intergenic | 15.0% |
| !!! | AATTATCAAACGATTTTATA+CGG | - | chr5_4:44428122-44428141 | None:intergenic | 15.0% |
| !! | TACATTAAAAAAAGTTTATG+AGG | - | chr5_4:44428283-44428302 | None:intergenic | 15.0% |
| !! | AAAAATGGTTTATTAAAACT+TGG | + | chr5_4:44428390-44428409 | Msa0852980:intron | 15.0% |
| !! | AAAATGGTTTATTAAAACTT+GGG | + | chr5_4:44428391-44428410 | Msa0852980:intron | 15.0% |
| !!! | ATATAGTTTTTTTTGTTTGA+AGG | + | chr5_4:44428694-44428713 | Msa0852980:intron | 15.0% |
| !!! | TTTTAATTGTTTATATGGAT+AGG | - | chr5_4:44429094-44429113 | None:intergenic | 15.0% |
| !!! | TCTGTTTTTAATTGTTTATA+TGG | - | chr5_4:44429099-44429118 | None:intergenic | 15.0% |
| !! | AATCTATGTTAAAATACTAT+GGG | - | chr5_4:44427620-44427639 | None:intergenic | 15.0% |
| !!! | AATTATCAAACGATTTTATA+CGG | - | chr5_4:44428122-44428141 | None:intergenic | 15.0% |
| !! | TACATTAAAAAAAGTTTATG+AGG | - | chr5_4:44428283-44428302 | None:intergenic | 15.0% |
| !! | AAAAATGGTTTATTAAAACT+TGG | + | chr5_4:44428390-44428409 | Msa0852980:intron | 15.0% |
| !! | AAAATGGTTTATTAAAACTT+GGG | + | chr5_4:44428391-44428410 | Msa0852980:intron | 15.0% |
| !!! | ATATAGTTTTTTTTGTTTGA+AGG | + | chr5_4:44428694-44428713 | Msa0852980:intron | 15.0% |
| !!! | TTTTAATTGTTTATATGGAT+AGG | - | chr5_4:44429094-44429113 | None:intergenic | 15.0% |
| !!! | TCTGTTTTTAATTGTTTATA+TGG | - | chr5_4:44429099-44429118 | None:intergenic | 15.0% |
| !! | TAAGAAATGAAAGTAGTATA+AGG | - | chr5_4:44425994-44426013 | None:intergenic | 20.0% |
| !!! | AAGCTTTGATTTTTCATTAT+TGG | + | chr5_4:44426444-44426463 | Msa0852980:intron | 20.0% |
| !! | TCAATAACAAATTCAAAAGT+TGG | - | chr5_4:44426590-44426609 | None:intergenic | 20.0% |
| !!! | TATTGATTTTTTTAAAACGG+TGG | - | chr5_4:44426870-44426889 | None:intergenic | 20.0% |
| !! | ATACATATAATTAGTACTTC+AGG | + | chr5_4:44426929-44426948 | Msa0852980:intron | 20.0% |
| !!! | GTAGATATATTTTTTCTTTC+TGG | + | chr5_4:44427195-44427214 | Msa0852980:intron | 20.0% |
| !!! | TCAAATAAAGCATTTTGTTA+AGG | + | chr5_4:44427456-44427475 | Msa0852980:intron | 20.0% |
| !! | ATCTATGTTAAAATACTATG+GGG | - | chr5_4:44427619-44427638 | None:intergenic | 20.0% |
| !! | CAATCTATGTTAAAATACTA+TGG | - | chr5_4:44427621-44427640 | None:intergenic | 20.0% |
| !! | ATGAATTGTTCATATCTTAA+AGG | - | chr5_4:44427695-44427714 | None:intergenic | 20.0% |
| !!! | TTTAAGATATGAACAATTCA+TGG | + | chr5_4:44427694-44427713 | Msa0852980:CDS | 20.0% |
| !! | ATCATATCAAGTAACAAAAA+TGG | + | chr5_4:44428375-44428394 | Msa0852980:intron | 20.0% |
| !! | AAATGGTTTATTAAAACTTG+GGG | + | chr5_4:44428392-44428411 | Msa0852980:intron | 20.0% |
| !!! | ATCAAAACAATTTTCATTGA+GGG | + | chr5_4:44429126-44429145 | Msa0852980:intron | 20.0% |
| !! | TAAGAAATGAAAGTAGTATA+AGG | - | chr5_4:44425994-44426013 | None:intergenic | 20.0% |
| !!! | AAGCTTTGATTTTTCATTAT+TGG | + | chr5_4:44426444-44426463 | Msa0852980:intron | 20.0% |
| !! | TCAATAACAAATTCAAAAGT+TGG | - | chr5_4:44426590-44426609 | None:intergenic | 20.0% |
| !!! | TATTGATTTTTTTAAAACGG+TGG | - | chr5_4:44426870-44426889 | None:intergenic | 20.0% |
| !! | ATACATATAATTAGTACTTC+AGG | + | chr5_4:44426929-44426948 | Msa0852980:intron | 20.0% |
| !!! | GTAGATATATTTTTTCTTTC+TGG | + | chr5_4:44427195-44427214 | Msa0852980:intron | 20.0% |
| !!! | TCAAATAAAGCATTTTGTTA+AGG | + | chr5_4:44427456-44427475 | Msa0852980:intron | 20.0% |
| !! | ATCTATGTTAAAATACTATG+GGG | - | chr5_4:44427619-44427638 | None:intergenic | 20.0% |
| !! | CAATCTATGTTAAAATACTA+TGG | - | chr5_4:44427621-44427640 | None:intergenic | 20.0% |
| !! | ATGAATTGTTCATATCTTAA+AGG | - | chr5_4:44427695-44427714 | None:intergenic | 20.0% |
| !!! | TTTAAGATATGAACAATTCA+TGG | + | chr5_4:44427694-44427713 | Msa0852980:CDS | 20.0% |
| !! | ATCATATCAAGTAACAAAAA+TGG | + | chr5_4:44428375-44428394 | Msa0852980:intron | 20.0% |
| !! | AAATGGTTTATTAAAACTTG+GGG | + | chr5_4:44428392-44428411 | Msa0852980:intron | 20.0% |
| !!! | ATCAAAACAATTTTCATTGA+GGG | + | chr5_4:44429126-44429145 | Msa0852980:intron | 20.0% |
| ! | AATTTATGAACTTTGTTCCA+GGG | - | chr5_4:44425689-44425708 | None:intergenic | 25.0% |
| ! | TAATTTATGAACTTTGTTCC+AGG | - | chr5_4:44425690-44425709 | None:intergenic | 25.0% |
| ! | GGAACAAAGTTCATAAATTA+AGG | + | chr5_4:44425690-44425709 | Msa0852980:five_prime_UTR | 25.0% |
| ! | ACTACTTTCATTTCTTAGTA+TGG | + | chr5_4:44425997-44426016 | Msa0852980:intron | 25.0% |
| ! | GCATCAGTACAATAAATTAT+TGG | - | chr5_4:44426180-44426199 | None:intergenic | 25.0% |
| ! | ATTGGAAAGATGCAAATTAA+AGG | - | chr5_4:44426309-44426328 | None:intergenic | 25.0% |
| !!! | GATATTTTGAAAGAAAAGCT+AGG | + | chr5_4:44427165-44427184 | Msa0852980:CDS | 25.0% |
| ! | AACATTCATTCTCTTCATAT+AGG | - | chr5_4:44427313-44427332 | None:intergenic | 25.0% |
| ! | CAAAAAACAACACAATTTGA+TGG | - | chr5_4:44428007-44428026 | None:intergenic | 25.0% |
| ! | AGAATACTATCAAATTTGTG+TGG | - | chr5_4:44428170-44428189 | None:intergenic | 25.0% |
| !!! | TTTATTTTCGTGAATACTCA+CGG | + | chr5_4:44428485-44428504 | Msa0852980:intron | 25.0% |
| ! | ACGAAATTCATATCAAAAAC+AGG | - | chr5_4:44428540-44428559 | None:intergenic | 25.0% |
| ! | TTGAAAAAAATATCCCACAT+TGG | - | chr5_4:44428659-44428678 | None:intergenic | 25.0% |
| ! | ACACTTATGTTCTAACATAT+TGG | + | chr5_4:44428750-44428769 | Msa0852980:intron | 25.0% |
| ! | TTCTTATTCAATGGAATGAA+AGG | - | chr5_4:44428859-44428878 | None:intergenic | 25.0% |
| ! | TAATTGCATAACACTAGAAA+TGG | - | chr5_4:44429036-44429055 | None:intergenic | 25.0% |
| !! | GATCAAAACAATTTTCATTG+AGG | + | chr5_4:44429125-44429144 | Msa0852980:intron | 25.0% |
| !!! | TATTGCGCTTTTAAAATTTC+AGG | + | chr5_4:44429193-44429212 | Msa0852980:intron | 25.0% |
| ! | ATATTAGAATCACAAGTGTT+GGG | - | chr5_4:44429435-44429454 | None:intergenic | 25.0% |
| ! | AATTTATGAACTTTGTTCCA+GGG | - | chr5_4:44425689-44425708 | None:intergenic | 25.0% |
| ! | TAATTTATGAACTTTGTTCC+AGG | - | chr5_4:44425690-44425709 | None:intergenic | 25.0% |
| ! | GGAACAAAGTTCATAAATTA+AGG | + | chr5_4:44425690-44425709 | Msa0852980:five_prime_UTR | 25.0% |
| ! | ACTACTTTCATTTCTTAGTA+TGG | + | chr5_4:44425997-44426016 | Msa0852980:intron | 25.0% |
| ! | GCATCAGTACAATAAATTAT+TGG | - | chr5_4:44426180-44426199 | None:intergenic | 25.0% |
| ! | ATTGGAAAGATGCAAATTAA+AGG | - | chr5_4:44426309-44426328 | None:intergenic | 25.0% |
| !!! | GATATTTTGAAAGAAAAGCT+AGG | + | chr5_4:44427165-44427184 | Msa0852980:CDS | 25.0% |
| ! | AACATTCATTCTCTTCATAT+AGG | - | chr5_4:44427313-44427332 | None:intergenic | 25.0% |
| ! | CAAAAAACAACACAATTTGA+TGG | - | chr5_4:44428007-44428026 | None:intergenic | 25.0% |
| ! | AGAATACTATCAAATTTGTG+TGG | - | chr5_4:44428170-44428189 | None:intergenic | 25.0% |
| !!! | TTTATTTTCGTGAATACTCA+CGG | + | chr5_4:44428485-44428504 | Msa0852980:intron | 25.0% |
| ! | ACGAAATTCATATCAAAAAC+AGG | - | chr5_4:44428540-44428559 | None:intergenic | 25.0% |
| ! | TTGAAAAAAATATCCCACAT+TGG | - | chr5_4:44428659-44428678 | None:intergenic | 25.0% |
| ! | ACACTTATGTTCTAACATAT+TGG | + | chr5_4:44428750-44428769 | Msa0852980:intron | 25.0% |
| ! | TTCTTATTCAATGGAATGAA+AGG | - | chr5_4:44428859-44428878 | None:intergenic | 25.0% |
| ! | TAATTGCATAACACTAGAAA+TGG | - | chr5_4:44429036-44429055 | None:intergenic | 25.0% |
| !! | GATCAAAACAATTTTCATTG+AGG | + | chr5_4:44429125-44429144 | Msa0852980:intron | 25.0% |
| !!! | TATTGCGCTTTTAAAATTTC+AGG | + | chr5_4:44429193-44429212 | Msa0852980:intron | 25.0% |
| ! | ATATTAGAATCACAAGTGTT+GGG | - | chr5_4:44429435-44429454 | None:intergenic | 25.0% |
| TCAAAGTCATAAGAGAAAGA+AGG | - | chr5_4:44425861-44425880 | None:intergenic | 30.0% | |
| ! | ATGACTTTGAAAGAGAAGAT+TGG | + | chr5_4:44425871-44425890 | Msa0852980:CDS | 30.0% |
| AGTAACAGAACGTTCAATTT+GGG | - | chr5_4:44425905-44425924 | None:intergenic | 30.0% | |
| TAGTAACAGAACGTTCAATT+TGG | - | chr5_4:44425906-44425925 | None:intergenic | 30.0% | |
| ACCAATGGTGAAATCTTTAA+TGG | - | chr5_4:44425938-44425957 | None:intergenic | 30.0% | |
| ! | AGATAGTAATAGAGTACCAA+TGG | - | chr5_4:44425953-44425972 | None:intergenic | 30.0% |
| ! | TCCTTGTATTTTGCAACTAA+GGG | + | chr5_4:44426040-44426059 | Msa0852980:intron | 30.0% |
| ! | TATTGTACTGATGCTATTCA+CGG | + | chr5_4:44426186-44426205 | Msa0852980:CDS | 30.0% |
| !!! | CATCTTTCCAATTTTAGCTA+TGG | + | chr5_4:44426317-44426336 | Msa0852980:intron | 30.0% |
| !! | GCATGTTTGTATTGACTTAT+AGG | + | chr5_4:44426346-44426365 | Msa0852980:intron | 30.0% |
| ACTTGCATATGTGAATGAAT+AGG | + | chr5_4:44426670-44426689 | Msa0852980:intron | 30.0% | |
| AAACATAAGAAGTCATGTCT+TGG | - | chr5_4:44426757-44426776 | None:intergenic | 30.0% | |
| ATTCGACAAAAATGTATGCA+TGG | - | chr5_4:44426901-44426920 | None:intergenic | 30.0% | |
| ! | TACAGAAAAAGGTGTAAATG+AGG | + | chr5_4:44426996-44427015 | Msa0852980:CDS | 30.0% |
| ! | ACAGAAAAAGGTGTAAATGA+GGG | + | chr5_4:44426997-44427016 | Msa0852980:CDS | 30.0% |
| TGTTCTATACAATCCACATA+CGG | - | chr5_4:44427069-44427088 | None:intergenic | 30.0% | |
| ! | TTCTGGAAATTGATCGTTTA+TGG | + | chr5_4:44427212-44427231 | Msa0852980:intron | 30.0% |
| AAATCTAAGAGAACTAGATC+AGG | + | chr5_4:44427334-44427353 | Msa0852980:intron | 30.0% | |
| GATGAATTATGTCAACCTTA+TGG | + | chr5_4:44427526-44427545 | Msa0852980:CDS | 30.0% | |
| TAACGATAATCTGAACCATA+AGG | - | chr5_4:44427544-44427563 | None:intergenic | 30.0% | |
| ATATCTACTTCCATTAATGC+TGG | + | chr5_4:44427568-44427587 | Msa0852980:CDS | 30.0% | |
| ATATATTCGTGAACATATGC+AGG | + | chr5_4:44427661-44427680 | Msa0852980:intron | 30.0% | |
| CATCTAGTACTCACTTTAAA+TGG | + | chr5_4:44427968-44427987 | Msa0852980:intron | 30.0% | |
| ACTCTCAACTATAGCTATTA+CGG | + | chr5_4:44428144-44428163 | Msa0852980:intron | 30.0% | |
| TATTCTACTCGAAACTGAAA+TGG | + | chr5_4:44428184-44428203 | Msa0852980:intron | 30.0% | |
| AGTTCATTAACACAAGTCAA+AGG | + | chr5_4:44428232-44428251 | Msa0852980:intron | 30.0% | |
| GTTCATTAACACAAGTCAAA+GGG | + | chr5_4:44428233-44428252 | Msa0852980:intron | 30.0% | |
| AATTGATCCATGAGAAACTT+GGG | + | chr5_4:44428336-44428355 | Msa0852980:intron | 30.0% | |
| ! | ATTATTTAGCTCAAGCTTGT+CGG | + | chr5_4:44428449-44428468 | Msa0852980:intron | 30.0% |
| ! | AACAGGATTTTAAGCGTTTT+GGG | - | chr5_4:44428523-44428542 | None:intergenic | 30.0% |
| ! | AAACAGGATTTTAAGCGTTT+TGG | - | chr5_4:44428524-44428543 | None:intergenic | 30.0% |
| !! | TACATTGATAGCGTTTGTAT+AGG | - | chr5_4:44428626-44428645 | None:intergenic | 30.0% |
| TAAGTGTAGCAATTGAAAGT+TGG | - | chr5_4:44428737-44428756 | None:intergenic | 30.0% | |
| !!! | TCCTTGGTTTTGTTGAAAAA+CGG | + | chr5_4:44428817-44428836 | Msa0852980:CDS | 30.0% |
| AATGGAATGAAAGGTTTACT+AGG | - | chr5_4:44428850-44428869 | None:intergenic | 30.0% | |
| TTTACTAAGTATGGATCTAG+TGG | + | chr5_4:44428946-44428965 | Msa0852980:CDS | 30.0% | |
| AATTTCAGGCACAACTATAT+TGG | + | chr5_4:44429207-44429226 | Msa0852980:intron | 30.0% | |
| TCATTACGTTCTATGAATTC+TGG | - | chr5_4:44429292-44429311 | None:intergenic | 30.0% | |
| GAACTTGTAATCCCATTTAA+TGG | + | chr5_4:44429376-44429395 | Msa0852980:CDS | 30.0% | |
| GATATTAGAATCACAAGTGT+TGG | - | chr5_4:44429436-44429455 | None:intergenic | 30.0% | |
| ACACTTGTGATTCTAATATC+TGG | + | chr5_4:44429436-44429455 | Msa0852980:CDS | 30.0% | |
| TCAAAGTCATAAGAGAAAGA+AGG | - | chr5_4:44425861-44425880 | None:intergenic | 30.0% | |
| ! | ATGACTTTGAAAGAGAAGAT+TGG | + | chr5_4:44425871-44425890 | Msa0852980:CDS | 30.0% |
| AGTAACAGAACGTTCAATTT+GGG | - | chr5_4:44425905-44425924 | None:intergenic | 30.0% | |
| TAGTAACAGAACGTTCAATT+TGG | - | chr5_4:44425906-44425925 | None:intergenic | 30.0% | |
| ACCAATGGTGAAATCTTTAA+TGG | - | chr5_4:44425938-44425957 | None:intergenic | 30.0% | |
| ! | AGATAGTAATAGAGTACCAA+TGG | - | chr5_4:44425953-44425972 | None:intergenic | 30.0% |
| ! | TCCTTGTATTTTGCAACTAA+GGG | + | chr5_4:44426040-44426059 | Msa0852980:intron | 30.0% |
| ! | TATTGTACTGATGCTATTCA+CGG | + | chr5_4:44426186-44426205 | Msa0852980:CDS | 30.0% |
| !!! | CATCTTTCCAATTTTAGCTA+TGG | + | chr5_4:44426317-44426336 | Msa0852980:intron | 30.0% |
| !! | GCATGTTTGTATTGACTTAT+AGG | + | chr5_4:44426346-44426365 | Msa0852980:intron | 30.0% |
| ACTTGCATATGTGAATGAAT+AGG | + | chr5_4:44426670-44426689 | Msa0852980:intron | 30.0% | |
| AAACATAAGAAGTCATGTCT+TGG | - | chr5_4:44426757-44426776 | None:intergenic | 30.0% | |
| ATTCGACAAAAATGTATGCA+TGG | - | chr5_4:44426901-44426920 | None:intergenic | 30.0% | |
| ! | TACAGAAAAAGGTGTAAATG+AGG | + | chr5_4:44426996-44427015 | Msa0852980:CDS | 30.0% |
| ! | ACAGAAAAAGGTGTAAATGA+GGG | + | chr5_4:44426997-44427016 | Msa0852980:CDS | 30.0% |
| TGTTCTATACAATCCACATA+CGG | - | chr5_4:44427069-44427088 | None:intergenic | 30.0% | |
| ! | TTCTGGAAATTGATCGTTTA+TGG | + | chr5_4:44427212-44427231 | Msa0852980:intron | 30.0% |
| AAATCTAAGAGAACTAGATC+AGG | + | chr5_4:44427334-44427353 | Msa0852980:intron | 30.0% | |
| GATGAATTATGTCAACCTTA+TGG | + | chr5_4:44427526-44427545 | Msa0852980:CDS | 30.0% | |
| TAACGATAATCTGAACCATA+AGG | - | chr5_4:44427544-44427563 | None:intergenic | 30.0% | |
| ATATCTACTTCCATTAATGC+TGG | + | chr5_4:44427568-44427587 | Msa0852980:CDS | 30.0% | |
| ATATATTCGTGAACATATGC+AGG | + | chr5_4:44427661-44427680 | Msa0852980:intron | 30.0% | |
| CATCTAGTACTCACTTTAAA+TGG | + | chr5_4:44427968-44427987 | Msa0852980:intron | 30.0% | |
| ACTCTCAACTATAGCTATTA+CGG | + | chr5_4:44428144-44428163 | Msa0852980:intron | 30.0% | |
| TATTCTACTCGAAACTGAAA+TGG | + | chr5_4:44428184-44428203 | Msa0852980:intron | 30.0% | |
| AGTTCATTAACACAAGTCAA+AGG | + | chr5_4:44428232-44428251 | Msa0852980:intron | 30.0% | |
| GTTCATTAACACAAGTCAAA+GGG | + | chr5_4:44428233-44428252 | Msa0852980:intron | 30.0% | |
| AATTGATCCATGAGAAACTT+GGG | + | chr5_4:44428336-44428355 | Msa0852980:intron | 30.0% | |
| ! | ATTATTTAGCTCAAGCTTGT+CGG | + | chr5_4:44428449-44428468 | Msa0852980:intron | 30.0% |
| ! | AACAGGATTTTAAGCGTTTT+GGG | - | chr5_4:44428523-44428542 | None:intergenic | 30.0% |
| ! | AAACAGGATTTTAAGCGTTT+TGG | - | chr5_4:44428524-44428543 | None:intergenic | 30.0% |
| !! | TACATTGATAGCGTTTGTAT+AGG | - | chr5_4:44428626-44428645 | None:intergenic | 30.0% |
| TAAGTGTAGCAATTGAAAGT+TGG | - | chr5_4:44428737-44428756 | None:intergenic | 30.0% | |
| !!! | TCCTTGGTTTTGTTGAAAAA+CGG | + | chr5_4:44428817-44428836 | Msa0852980:CDS | 30.0% |
| AATGGAATGAAAGGTTTACT+AGG | - | chr5_4:44428850-44428869 | None:intergenic | 30.0% | |
| TTTACTAAGTATGGATCTAG+TGG | + | chr5_4:44428946-44428965 | Msa0852980:CDS | 30.0% | |
| AATTTCAGGCACAACTATAT+TGG | + | chr5_4:44429207-44429226 | Msa0852980:intron | 30.0% | |
| TCATTACGTTCTATGAATTC+TGG | - | chr5_4:44429292-44429311 | None:intergenic | 30.0% | |
| GAACTTGTAATCCCATTTAA+TGG | + | chr5_4:44429376-44429395 | Msa0852980:CDS | 30.0% | |
| GATATTAGAATCACAAGTGT+TGG | - | chr5_4:44429436-44429455 | None:intergenic | 30.0% | |
| ACACTTGTGATTCTAATATC+TGG | + | chr5_4:44429436-44429455 | Msa0852980:CDS | 30.0% | |
| ! | TATAATAAAAGTGCATGCCC+TGG | + | chr5_4:44425669-44425688 | Msa0852980:five_prime_UTR | 35.0% |
| TTGATGTCCAAATGGTGAAA+TGG | - | chr5_4:44425721-44425740 | None:intergenic | 35.0% | |
| CAAGAACTAAGTCAGTTACA+TGG | + | chr5_4:44425786-44425805 | Msa0852980:exon | 35.0% | |
| TTCAGCAGGATTCATATACA+CGG | - | chr5_4:44425815-44425834 | None:intergenic | 35.0% | |
| GTATATGAATCCTGCTGAAA+CGG | + | chr5_4:44425816-44425835 | Msa0852980:CDS | 35.0% | |
| GTGAAATCTTTAATGGCAGA+AGG | - | chr5_4:44425931-44425950 | None:intergenic | 35.0% | |
| GCCATTAAAGATTTCACCAT+TGG | + | chr5_4:44425934-44425953 | Msa0852980:CDS | 35.0% | |
| ! | CTCCTTGTATTTTGCAACTA+AGG | + | chr5_4:44426039-44426058 | Msa0852980:intron | 35.0% |
| TCCCTTAGTTGCAAAATACA+AGG | - | chr5_4:44426044-44426063 | None:intergenic | 35.0% | |
| TTCTTAGCAGTTGCACTATT+TGG | - | chr5_4:44426084-44426103 | None:intergenic | 35.0% | |
| AAATAGTGCAACTGCTAAGA+AGG | + | chr5_4:44426083-44426102 | Msa0852980:CDS | 35.0% | |
| ACTATATTTCCTCACAACGT+TGG | + | chr5_4:44426231-44426250 | Msa0852980:CDS | 35.0% | |
| CCTTTGTCCATAGCTAAAAT+TGG | - | chr5_4:44426327-44426346 | None:intergenic | 35.0% | |
| !!! | CCAATTTTAGCTATGGACAA+AGG | + | chr5_4:44426324-44426343 | Msa0852980:intron | 35.0% |
| AAAATGCATAATCACCTGTG+AGG | + | chr5_4:44426392-44426411 | Msa0852980:intron | 35.0% | |
| AAATGCATAATCACCTGTGA+GGG | + | chr5_4:44426393-44426412 | Msa0852980:intron | 35.0% | |
| AGTCATGTCTTGGACAATTT+CGG | - | chr5_4:44426747-44426766 | None:intergenic | 35.0% | |
| GACATGACTTCTTATGTTTC+AGG | + | chr5_4:44426758-44426777 | Msa0852980:CDS | 35.0% | |
| !! | TCTTATGTTTCAGGTTTGCA+AGG | + | chr5_4:44426767-44426786 | Msa0852980:CDS | 35.0% |
| ! | CAGAAAAAGGTGTAAATGAG+GGG | + | chr5_4:44426998-44427017 | Msa0852980:CDS | 35.0% |
| TTCTATACAATCCACATACG+GGG | - | chr5_4:44427067-44427086 | None:intergenic | 35.0% | |
| GTTCTATACAATCCACATAC+GGG | - | chr5_4:44427068-44427087 | None:intergenic | 35.0% | |
| ! | ACAAGCTGTTTCAACCATTA+TGG | + | chr5_4:44427086-44427105 | Msa0852980:CDS | 35.0% |
| TAATCAGAAATCGATGACCA+TGG | - | chr5_4:44427143-44427162 | None:intergenic | 35.0% | |
| GGAAATTGATCGTTTATGGA+TGG | + | chr5_4:44427216-44427235 | Msa0852980:intron | 35.0% | |
| ! | TAAGGTCAATTTTCCACTGT+AGG | + | chr5_4:44427474-44427493 | Msa0852980:intron | 35.0% |
| ! | AAGGTCAATTTTCCACTGTA+GGG | + | chr5_4:44427475-44427494 | Msa0852980:intron | 35.0% |
| CATGTCAATTCCAGCATTAA+TGG | - | chr5_4:44427581-44427600 | None:intergenic | 35.0% | |
| CATTAATGCTGGAATTGACA+TGG | + | chr5_4:44427579-44427598 | Msa0852980:CDS | 35.0% | |
| TGAACAATTCATGGAAGAGT+TGG | + | chr5_4:44427703-44427722 | Msa0852980:CDS | 35.0% | |
| AGCAAAGATCTGTCAGTTAA+AGG | - | chr5_4:44427827-44427846 | None:intergenic | 35.0% | |
| TTTAACTGACAGATCTTTGC+TGG | + | chr5_4:44427826-44427845 | Msa0852980:CDS | 35.0% | |
| ! | TCTTCGGTGGTAATTTTTCA+AGG | - | chr5_4:44428043-44428062 | None:intergenic | 35.0% |
| ATTACCACCGAAGAGATTAT+CGG | + | chr5_4:44428049-44428068 | Msa0852980:intron | 35.0% | |
| GTAACAGTGAACTAACGAAT+TGG | - | chr5_4:44428087-44428106 | None:intergenic | 35.0% | |
| AAAGGGAGAAAGGAAGAAAA+AGG | + | chr5_4:44428250-44428269 | Msa0852980:intron | 35.0% | |
| CAATTGATCCATGAGAAACT+TGG | + | chr5_4:44428335-44428354 | Msa0852980:intron | 35.0% | |
| !!! | GATTTTAAGCGTTTTGGGAA+TGG | - | chr5_4:44428518-44428537 | None:intergenic | 35.0% |
| !!! | AGTGCTGATTTTGTGATGAT+CGG | - | chr5_4:44428574-44428593 | None:intergenic | 35.0% |
| TCACAAAATCAGCACTCTAA+AGG | + | chr5_4:44428578-44428597 | Msa0852980:intron | 35.0% | |
| ! | AAAATCAGCACTCTAAAGGA+TGG | + | chr5_4:44428582-44428601 | Msa0852980:intron | 35.0% |
| !! | ATTGATAGCGTTTGTATAGG+AGG | - | chr5_4:44428623-44428642 | None:intergenic | 35.0% |
| TGTATGTGATCTATCCAATG+TGG | + | chr5_4:44428642-44428661 | Msa0852980:intron | 35.0% | |
| GTATGTGATCTATCCAATGT+GGG | + | chr5_4:44428643-44428662 | Msa0852980:intron | 35.0% | |
| !! | TCCGTTTTTCAACAAAACCA+AGG | - | chr5_4:44428821-44428840 | None:intergenic | 35.0% |
| !!! | GGTTTTGTTGAAAAACGGAA+AGG | + | chr5_4:44428822-44428841 | Msa0852980:CDS | 35.0% |
| GGATGGACATTTACTAAGTA+TGG | + | chr5_4:44428937-44428956 | Msa0852980:CDS | 35.0% | |
| AACTATATTGGATGCTGCTA+AGG | + | chr5_4:44429219-44429238 | Msa0852980:CDS | 35.0% | |
| GTTCTATGAATTCTGGTGTT+GGG | - | chr5_4:44429285-44429304 | None:intergenic | 35.0% | |
| ! | TCTTTTGCCATTGTTGCTAT+TGG | + | chr5_4:44429316-44429335 | Msa0852980:CDS | 35.0% |
| CAATTCCAGCTCCATTAAAT+GGG | - | chr5_4:44429390-44429409 | None:intergenic | 35.0% | |
| ACAATTCCAGCTCCATTAAA+TGG | - | chr5_4:44429391-44429410 | None:intergenic | 35.0% | |
| TCTAATATCTGGAAGACCTT+TGG | + | chr5_4:44429447-44429466 | Msa0852980:CDS | 35.0% | |
| AAACTTTGTTCCAAGACCAA+AGG | - | chr5_4:44429466-44429485 | None:intergenic | 35.0% | |
| AAAAGTAGAAGCTCTTGTTG+CGG | + | chr5_4:44429492-44429511 | Msa0852980:CDS | 35.0% | |
| GGAATCACAGATGTTATCTT+CGG | + | chr5_4:44429541-44429560 | Msa0852980:CDS | 35.0% | |
| GAATCACAGATGTTATCTTC+GGG | + | chr5_4:44429542-44429561 | Msa0852980:CDS | 35.0% | |
| AATCACAGATGTTATCTTCG+GGG | + | chr5_4:44429543-44429562 | Msa0852980:CDS | 35.0% | |
| ACTCTTCTAAACCAAGTCAT+TGG | - | chr5_4:44429592-44429611 | None:intergenic | 35.0% | |
| ! | TATAATAAAAGTGCATGCCC+TGG | + | chr5_4:44425669-44425688 | Msa0852980:five_prime_UTR | 35.0% |
| TTGATGTCCAAATGGTGAAA+TGG | - | chr5_4:44425721-44425740 | None:intergenic | 35.0% | |
| CAAGAACTAAGTCAGTTACA+TGG | + | chr5_4:44425786-44425805 | Msa0852980:exon | 35.0% | |
| TTCAGCAGGATTCATATACA+CGG | - | chr5_4:44425815-44425834 | None:intergenic | 35.0% | |
| GTATATGAATCCTGCTGAAA+CGG | + | chr5_4:44425816-44425835 | Msa0852980:CDS | 35.0% | |
| GTGAAATCTTTAATGGCAGA+AGG | - | chr5_4:44425931-44425950 | None:intergenic | 35.0% | |
| GCCATTAAAGATTTCACCAT+TGG | + | chr5_4:44425934-44425953 | Msa0852980:CDS | 35.0% | |
| ! | CTCCTTGTATTTTGCAACTA+AGG | + | chr5_4:44426039-44426058 | Msa0852980:intron | 35.0% |
| TCCCTTAGTTGCAAAATACA+AGG | - | chr5_4:44426044-44426063 | None:intergenic | 35.0% | |
| TTCTTAGCAGTTGCACTATT+TGG | - | chr5_4:44426084-44426103 | None:intergenic | 35.0% | |
| AAATAGTGCAACTGCTAAGA+AGG | + | chr5_4:44426083-44426102 | Msa0852980:CDS | 35.0% | |
| ACTATATTTCCTCACAACGT+TGG | + | chr5_4:44426231-44426250 | Msa0852980:CDS | 35.0% | |
| CCTTTGTCCATAGCTAAAAT+TGG | - | chr5_4:44426327-44426346 | None:intergenic | 35.0% | |
| !!! | CCAATTTTAGCTATGGACAA+AGG | + | chr5_4:44426324-44426343 | Msa0852980:intron | 35.0% |
| AAAATGCATAATCACCTGTG+AGG | + | chr5_4:44426392-44426411 | Msa0852980:intron | 35.0% | |
| AAATGCATAATCACCTGTGA+GGG | + | chr5_4:44426393-44426412 | Msa0852980:intron | 35.0% | |
| AGTCATGTCTTGGACAATTT+CGG | - | chr5_4:44426747-44426766 | None:intergenic | 35.0% | |
| GACATGACTTCTTATGTTTC+AGG | + | chr5_4:44426758-44426777 | Msa0852980:CDS | 35.0% | |
| !! | TCTTATGTTTCAGGTTTGCA+AGG | + | chr5_4:44426767-44426786 | Msa0852980:CDS | 35.0% |
| ! | CAGAAAAAGGTGTAAATGAG+GGG | + | chr5_4:44426998-44427017 | Msa0852980:CDS | 35.0% |
| TTCTATACAATCCACATACG+GGG | - | chr5_4:44427067-44427086 | None:intergenic | 35.0% | |
| GTTCTATACAATCCACATAC+GGG | - | chr5_4:44427068-44427087 | None:intergenic | 35.0% | |
| ! | ACAAGCTGTTTCAACCATTA+TGG | + | chr5_4:44427086-44427105 | Msa0852980:CDS | 35.0% |
| TAATCAGAAATCGATGACCA+TGG | - | chr5_4:44427143-44427162 | None:intergenic | 35.0% | |
| GGAAATTGATCGTTTATGGA+TGG | + | chr5_4:44427216-44427235 | Msa0852980:intron | 35.0% | |
| ! | TAAGGTCAATTTTCCACTGT+AGG | + | chr5_4:44427474-44427493 | Msa0852980:intron | 35.0% |
| ! | AAGGTCAATTTTCCACTGTA+GGG | + | chr5_4:44427475-44427494 | Msa0852980:intron | 35.0% |
| CATGTCAATTCCAGCATTAA+TGG | - | chr5_4:44427581-44427600 | None:intergenic | 35.0% | |
| CATTAATGCTGGAATTGACA+TGG | + | chr5_4:44427579-44427598 | Msa0852980:CDS | 35.0% | |
| TGAACAATTCATGGAAGAGT+TGG | + | chr5_4:44427703-44427722 | Msa0852980:CDS | 35.0% | |
| AGCAAAGATCTGTCAGTTAA+AGG | - | chr5_4:44427827-44427846 | None:intergenic | 35.0% | |
| TTTAACTGACAGATCTTTGC+TGG | + | chr5_4:44427826-44427845 | Msa0852980:CDS | 35.0% | |
| ! | TCTTCGGTGGTAATTTTTCA+AGG | - | chr5_4:44428043-44428062 | None:intergenic | 35.0% |
| ATTACCACCGAAGAGATTAT+CGG | + | chr5_4:44428049-44428068 | Msa0852980:intron | 35.0% | |
| GTAACAGTGAACTAACGAAT+TGG | - | chr5_4:44428087-44428106 | None:intergenic | 35.0% | |
| AAAGGGAGAAAGGAAGAAAA+AGG | + | chr5_4:44428250-44428269 | Msa0852980:intron | 35.0% | |
| CAATTGATCCATGAGAAACT+TGG | + | chr5_4:44428335-44428354 | Msa0852980:intron | 35.0% | |
| !!! | GATTTTAAGCGTTTTGGGAA+TGG | - | chr5_4:44428518-44428537 | None:intergenic | 35.0% |
| !!! | AGTGCTGATTTTGTGATGAT+CGG | - | chr5_4:44428574-44428593 | None:intergenic | 35.0% |
| TCACAAAATCAGCACTCTAA+AGG | + | chr5_4:44428578-44428597 | Msa0852980:intron | 35.0% | |
| ! | AAAATCAGCACTCTAAAGGA+TGG | + | chr5_4:44428582-44428601 | Msa0852980:intron | 35.0% |
| !! | ATTGATAGCGTTTGTATAGG+AGG | - | chr5_4:44428623-44428642 | None:intergenic | 35.0% |
| TGTATGTGATCTATCCAATG+TGG | + | chr5_4:44428642-44428661 | Msa0852980:intron | 35.0% | |
| GTATGTGATCTATCCAATGT+GGG | + | chr5_4:44428643-44428662 | Msa0852980:intron | 35.0% | |
| !! | TCCGTTTTTCAACAAAACCA+AGG | - | chr5_4:44428821-44428840 | None:intergenic | 35.0% |
| !!! | GGTTTTGTTGAAAAACGGAA+AGG | + | chr5_4:44428822-44428841 | Msa0852980:CDS | 35.0% |
| GGATGGACATTTACTAAGTA+TGG | + | chr5_4:44428937-44428956 | Msa0852980:CDS | 35.0% | |
| AACTATATTGGATGCTGCTA+AGG | + | chr5_4:44429219-44429238 | Msa0852980:CDS | 35.0% | |
| GTTCTATGAATTCTGGTGTT+GGG | - | chr5_4:44429285-44429304 | None:intergenic | 35.0% | |
| ! | TCTTTTGCCATTGTTGCTAT+TGG | + | chr5_4:44429316-44429335 | Msa0852980:CDS | 35.0% |
| CAATTCCAGCTCCATTAAAT+GGG | - | chr5_4:44429390-44429409 | None:intergenic | 35.0% | |
| ACAATTCCAGCTCCATTAAA+TGG | - | chr5_4:44429391-44429410 | None:intergenic | 35.0% | |
| TCTAATATCTGGAAGACCTT+TGG | + | chr5_4:44429447-44429466 | Msa0852980:CDS | 35.0% | |
| AAACTTTGTTCCAAGACCAA+AGG | - | chr5_4:44429466-44429485 | None:intergenic | 35.0% | |
| AAAAGTAGAAGCTCTTGTTG+CGG | + | chr5_4:44429492-44429511 | Msa0852980:CDS | 35.0% | |
| GGAATCACAGATGTTATCTT+CGG | + | chr5_4:44429541-44429560 | Msa0852980:CDS | 35.0% | |
| GAATCACAGATGTTATCTTC+GGG | + | chr5_4:44429542-44429561 | Msa0852980:CDS | 35.0% | |
| AATCACAGATGTTATCTTCG+GGG | + | chr5_4:44429543-44429562 | Msa0852980:CDS | 35.0% | |
| ACTCTTCTAAACCAAGTCAT+TGG | - | chr5_4:44429592-44429611 | None:intergenic | 35.0% | |
| GGTTGTTCCATTTCACCATT+TGG | + | chr5_4:44425711-44425730 | Msa0852980:five_prime_UTR | 40.0% | |
| TTAGCAGTTGCACTATTTGG+TGG | - | chr5_4:44426081-44426100 | None:intergenic | 40.0% | |
| !! | AGAAGGAAGTGTCATCTGAT+TGG | + | chr5_4:44426100-44426119 | Msa0852980:CDS | 40.0% |
| !! | GAAGGAAGTGTCATCTGATT+GGG | + | chr5_4:44426101-44426120 | Msa0852980:CDS | 40.0% |
| CACGGTAACAATAACGTCTA+TGG | + | chr5_4:44426204-44426223 | Msa0852980:CDS | 40.0% | |
| AATGCATAATCACCTGTGAG+GGG | + | chr5_4:44426394-44426413 | Msa0852980:intron | 40.0% | |
| TCACTTGAACTTAGAGCAAG+TGG | + | chr5_4:44426519-44426538 | Msa0852980:CDS | 40.0% | |
| TAGCTCCTAGTGTATCTGTA+AGG | + | chr5_4:44426556-44426575 | Msa0852980:intron | 40.0% | |
| AGATGCCTTACAGATACACT+AGG | - | chr5_4:44426564-44426583 | None:intergenic | 40.0% | |
| !! | TTGGATGATTTTCTGGAGGT+TGG | - | chr5_4:44426793-44426812 | None:intergenic | 40.0% |
| AACCTCCAGAAAATCATCCA+AGG | + | chr5_4:44426792-44426811 | Msa0852980:CDS | 40.0% | |
| ACCTCCAGAAAATCATCCAA+GGG | + | chr5_4:44426793-44426812 | Msa0852980:CDS | 40.0% | |
| TCCAACAAAATGTCTAGCAC+AGG | - | chr5_4:44426968-44426987 | None:intergenic | 40.0% | |
| ! | GCTAGACATTTTGTTGGAGA+TGG | + | chr5_4:44426970-44426989 | Msa0852980:CDS | 40.0% |
| ! | AGACATTTTGTTGGAGATGG+AGG | + | chr5_4:44426973-44426992 | Msa0852980:CDS | 40.0% |
| AGACTTAGAGAAGATCCACA+TGG | + | chr5_4:44427041-44427060 | Msa0852980:CDS | 40.0% | |
| GCTGGAATATGAGACCATAA+TGG | - | chr5_4:44427103-44427122 | None:intergenic | 40.0% | |
| TTATGGTCTCATATTCCAGC+TGG | + | chr5_4:44427103-44427122 | Msa0852980:CDS | 40.0% | |
| GAAAGAAAAGCTAGGCTTCA+AGG | + | chr5_4:44427173-44427192 | Msa0852980:CDS | 40.0% | |
| GAAATCACAAAACCCTACAG+TGG | - | chr5_4:44427490-44427509 | None:intergenic | 40.0% | |
| !! | AGGGTTTTGTGATTTCTGAC+TGG | + | chr5_4:44427494-44427513 | Msa0852980:intron | 40.0% |
| !! | GGGTTTTGTGATTTCTGACT+GGG | + | chr5_4:44427495-44427514 | Msa0852980:intron | 40.0% |
| ! | TTTTGTGATTTCTGACTGGG+AGG | + | chr5_4:44427498-44427517 | Msa0852980:CDS | 40.0% |
| TTTGTGATTTCTGACTGGGA+GGG | + | chr5_4:44427499-44427518 | Msa0852980:CDS | 40.0% | |
| ! | GTTGGCATCTCTAGTTCAAT+CGG | + | chr5_4:44427721-44427740 | Msa0852980:CDS | 40.0% |
| ! | TTGGCATCTCTAGTTCAATC+GGG | + | chr5_4:44427722-44427741 | Msa0852980:CDS | 40.0% |
| CACTCTTAAAATCCGCTCAA+CGG | - | chr5_4:44427777-44427796 | None:intergenic | 40.0% | |
| AGATCTTTGCTGGATACTGT+TGG | + | chr5_4:44427836-44427855 | Msa0852980:CDS | 40.0% | |
| CAAGGTAAGTGAAGTTTAGC+TGG | + | chr5_4:44427862-44427881 | Msa0852980:intron | 40.0% | |
| TTACCACCGAAGAGATTATC+GGG | + | chr5_4:44428050-44428069 | Msa0852980:intron | 40.0% | |
| ACTCAACCCGATAATCTCTT+CGG | - | chr5_4:44428059-44428078 | None:intergenic | 40.0% | |
| AACACAAGTCAAAGGGAGAA+AGG | + | chr5_4:44428240-44428259 | Msa0852980:intron | 40.0% | |
| ACTTGGGAACAAGGATAACA+CGG | + | chr5_4:44428352-44428371 | Msa0852980:intron | 40.0% | |
| TTAAAACTTGGGGAGCAAGT+TGG | + | chr5_4:44428402-44428421 | Msa0852980:intron | 40.0% | |
| ! | CTGATTTTGTGATGATCGGA+TGG | - | chr5_4:44428570-44428589 | None:intergenic | 40.0% |
| CTCTTGGCGTTCTTATTCAA+TGG | - | chr5_4:44428868-44428887 | None:intergenic | 40.0% | |
| GGAACTCATGCTGATGATAT+CGG | + | chr5_4:44428901-44428920 | Msa0852980:CDS | 40.0% | |
| GAACTCATGCTGATGATATC+GGG | + | chr5_4:44428902-44428921 | Msa0852980:CDS | 40.0% | |
| GATGATATCGGGTATCAATG+TGG | + | chr5_4:44428913-44428932 | Msa0852980:CDS | 40.0% | |
| AAGGCTAACCAATTGTGATC+TGG | - | chr5_4:44428972-44428991 | None:intergenic | 40.0% | |
| CGTTCTATGAATTCTGGTGT+TGG | - | chr5_4:44429286-44429305 | None:intergenic | 40.0% | |
| GTAATCCCATTTAATGGAGC+TGG | + | chr5_4:44429382-44429401 | Msa0852980:CDS | 40.0% | |
| ATTCCATTTCCTTCACTACC+AGG | - | chr5_4:44429526-44429545 | None:intergenic | 40.0% | |
| AGGGTAAACTACCAATGACT+TGG | + | chr5_4:44429578-44429597 | Msa0852980:CDS | 40.0% | |
| CATGAATTCACTCCTTCAAC+AGG | - | chr5_4:44429631-44429650 | None:intergenic | 40.0% | |
| TCCTTATTCCCTCTTGGTTA+TGG | + | chr5_4:44429658-44429677 | Msa0852980:CDS | 40.0% | |
| CCTTATTCCCTCTTGGTTAT+GGG | + | chr5_4:44429659-44429678 | Msa0852980:CDS | 40.0% | |
| GGTTGTTCCATTTCACCATT+TGG | + | chr5_4:44425711-44425730 | Msa0852980:five_prime_UTR | 40.0% | |
| TTAGCAGTTGCACTATTTGG+TGG | - | chr5_4:44426081-44426100 | None:intergenic | 40.0% | |
| !! | AGAAGGAAGTGTCATCTGAT+TGG | + | chr5_4:44426100-44426119 | Msa0852980:CDS | 40.0% |
| !! | GAAGGAAGTGTCATCTGATT+GGG | + | chr5_4:44426101-44426120 | Msa0852980:CDS | 40.0% |
| CACGGTAACAATAACGTCTA+TGG | + | chr5_4:44426204-44426223 | Msa0852980:CDS | 40.0% | |
| AATGCATAATCACCTGTGAG+GGG | + | chr5_4:44426394-44426413 | Msa0852980:intron | 40.0% | |
| TCACTTGAACTTAGAGCAAG+TGG | + | chr5_4:44426519-44426538 | Msa0852980:CDS | 40.0% | |
| TAGCTCCTAGTGTATCTGTA+AGG | + | chr5_4:44426556-44426575 | Msa0852980:intron | 40.0% | |
| AGATGCCTTACAGATACACT+AGG | - | chr5_4:44426564-44426583 | None:intergenic | 40.0% | |
| !! | TTGGATGATTTTCTGGAGGT+TGG | - | chr5_4:44426793-44426812 | None:intergenic | 40.0% |
| AACCTCCAGAAAATCATCCA+AGG | + | chr5_4:44426792-44426811 | Msa0852980:CDS | 40.0% | |
| ACCTCCAGAAAATCATCCAA+GGG | + | chr5_4:44426793-44426812 | Msa0852980:CDS | 40.0% | |
| TCCAACAAAATGTCTAGCAC+AGG | - | chr5_4:44426968-44426987 | None:intergenic | 40.0% | |
| ! | GCTAGACATTTTGTTGGAGA+TGG | + | chr5_4:44426970-44426989 | Msa0852980:CDS | 40.0% |
| ! | AGACATTTTGTTGGAGATGG+AGG | + | chr5_4:44426973-44426992 | Msa0852980:CDS | 40.0% |
| AGACTTAGAGAAGATCCACA+TGG | + | chr5_4:44427041-44427060 | Msa0852980:CDS | 40.0% | |
| GCTGGAATATGAGACCATAA+TGG | - | chr5_4:44427103-44427122 | None:intergenic | 40.0% | |
| TTATGGTCTCATATTCCAGC+TGG | + | chr5_4:44427103-44427122 | Msa0852980:CDS | 40.0% | |
| GAAAGAAAAGCTAGGCTTCA+AGG | + | chr5_4:44427173-44427192 | Msa0852980:CDS | 40.0% | |
| GAAATCACAAAACCCTACAG+TGG | - | chr5_4:44427490-44427509 | None:intergenic | 40.0% | |
| !! | AGGGTTTTGTGATTTCTGAC+TGG | + | chr5_4:44427494-44427513 | Msa0852980:intron | 40.0% |
| !! | GGGTTTTGTGATTTCTGACT+GGG | + | chr5_4:44427495-44427514 | Msa0852980:intron | 40.0% |
| ! | TTTTGTGATTTCTGACTGGG+AGG | + | chr5_4:44427498-44427517 | Msa0852980:CDS | 40.0% |
| TTTGTGATTTCTGACTGGGA+GGG | + | chr5_4:44427499-44427518 | Msa0852980:CDS | 40.0% | |
| ! | GTTGGCATCTCTAGTTCAAT+CGG | + | chr5_4:44427721-44427740 | Msa0852980:CDS | 40.0% |
| ! | TTGGCATCTCTAGTTCAATC+GGG | + | chr5_4:44427722-44427741 | Msa0852980:CDS | 40.0% |
| CACTCTTAAAATCCGCTCAA+CGG | - | chr5_4:44427777-44427796 | None:intergenic | 40.0% | |
| AGATCTTTGCTGGATACTGT+TGG | + | chr5_4:44427836-44427855 | Msa0852980:CDS | 40.0% | |
| CAAGGTAAGTGAAGTTTAGC+TGG | + | chr5_4:44427862-44427881 | Msa0852980:intron | 40.0% | |
| TTACCACCGAAGAGATTATC+GGG | + | chr5_4:44428050-44428069 | Msa0852980:intron | 40.0% | |
| ACTCAACCCGATAATCTCTT+CGG | - | chr5_4:44428059-44428078 | None:intergenic | 40.0% | |
| AACACAAGTCAAAGGGAGAA+AGG | + | chr5_4:44428240-44428259 | Msa0852980:intron | 40.0% | |
| ACTTGGGAACAAGGATAACA+CGG | + | chr5_4:44428352-44428371 | Msa0852980:intron | 40.0% | |
| TTAAAACTTGGGGAGCAAGT+TGG | + | chr5_4:44428402-44428421 | Msa0852980:intron | 40.0% | |
| ! | CTGATTTTGTGATGATCGGA+TGG | - | chr5_4:44428570-44428589 | None:intergenic | 40.0% |
| CTCTTGGCGTTCTTATTCAA+TGG | - | chr5_4:44428868-44428887 | None:intergenic | 40.0% | |
| GGAACTCATGCTGATGATAT+CGG | + | chr5_4:44428901-44428920 | Msa0852980:CDS | 40.0% | |
| GAACTCATGCTGATGATATC+GGG | + | chr5_4:44428902-44428921 | Msa0852980:CDS | 40.0% | |
| GATGATATCGGGTATCAATG+TGG | + | chr5_4:44428913-44428932 | Msa0852980:CDS | 40.0% | |
| AAGGCTAACCAATTGTGATC+TGG | - | chr5_4:44428972-44428991 | None:intergenic | 40.0% | |
| CGTTCTATGAATTCTGGTGT+TGG | - | chr5_4:44429286-44429305 | None:intergenic | 40.0% | |
| GTAATCCCATTTAATGGAGC+TGG | + | chr5_4:44429382-44429401 | Msa0852980:CDS | 40.0% | |
| ATTCCATTTCCTTCACTACC+AGG | - | chr5_4:44429526-44429545 | None:intergenic | 40.0% | |
| AGGGTAAACTACCAATGACT+TGG | + | chr5_4:44429578-44429597 | Msa0852980:CDS | 40.0% | |
| CATGAATTCACTCCTTCAAC+AGG | - | chr5_4:44429631-44429650 | None:intergenic | 40.0% | |
| TCCTTATTCCCTCTTGGTTA+TGG | + | chr5_4:44429658-44429677 | Msa0852980:CDS | 40.0% | |
| CCTTATTCCCTCTTGGTTAT+GGG | + | chr5_4:44429659-44429678 | Msa0852980:CDS | 40.0% | |
| !! | CTGCAGAGTTGATGTCCAAA+TGG | - | chr5_4:44425729-44425748 | None:intergenic | 45.0% |
| GTCATCTGATTGGGCTGATA+TGG | + | chr5_4:44426110-44426129 | Msa0852980:CDS | 45.0% | |
| GATTGGGCTGATATGGTTGA+CGG | + | chr5_4:44426117-44426136 | Msa0852980:CDS | 45.0% | |
| AGGTCTGCAAAGATCCTAGA+TGG | + | chr5_4:44426690-44426709 | Msa0852980:intron | 45.0% | |
| GGTCTGCAAAGATCCTAGAT+GGG | + | chr5_4:44426691-44426710 | Msa0852980:intron | 45.0% | |
| GTCTGCAAAGATCCTAGATG+GGG | + | chr5_4:44426692-44426711 | Msa0852980:CDS | 45.0% | |
| TCATAGCATCTTCCCCATCT+AGG | - | chr5_4:44426707-44426726 | None:intergenic | 45.0% | |
| CCTCCAGAAAATCATCCAAG+GGG | + | chr5_4:44426794-44426813 | Msa0852980:CDS | 45.0% | |
| ! | TAGCCCCTTGGATGATTTTC+TGG | - | chr5_4:44426800-44426819 | None:intergenic | 45.0% |
| ! | GCCTGTGCTAGACATTTTGT+TGG | + | chr5_4:44426964-44426983 | Msa0852980:CDS | 45.0% |
| ! | GGAGATGGAGGTACAGAAAA+AGG | + | chr5_4:44426985-44427004 | Msa0852980:CDS | 45.0% |
| GTCTCATATTCCAGCTGGAA+TGG | + | chr5_4:44427108-44427127 | Msa0852980:CDS | 45.0% | |
| TGGAATGGAGTCAAACTCCA+TGG | + | chr5_4:44427123-44427142 | Msa0852980:CDS | 45.0% | |
| TCGTGAACATATGCAGGTGA+TGG | + | chr5_4:44427667-44427686 | Msa0852980:intron | 45.0% | |
| ! | TGGCATCTCTAGTTCAATCG+GGG | + | chr5_4:44427723-44427742 | Msa0852980:CDS | 45.0% |
| GCATCATCAATCCTGGCTAT+TGG | - | chr5_4:44427755-44427774 | None:intergenic | 45.0% | |
| CCTTGTTCCCAAGTTTCTCA+TGG | - | chr5_4:44428346-44428365 | None:intergenic | 45.0% | |
| CCATGAGAAACTTGGGAACA+AGG | + | chr5_4:44428343-44428362 | Msa0852980:intron | 45.0% | |
| ATAGGAGGAGAGGAGTCTTA+AGG | - | chr5_4:44428608-44428627 | None:intergenic | 45.0% | |
| TAGCGTTTGTATAGGAGGAG+AGG | - | chr5_4:44428618-44428637 | None:intergenic | 45.0% | |
| TGAAGCAGTTCGAAAGTCCT+TGG | + | chr5_4:44428801-44428820 | Msa0852980:CDS | 45.0% | |
| TCCAGCAACAAGGATTCTCT+TGG | - | chr5_4:44428884-44428903 | None:intergenic | 45.0% | |
| GATATCGGGTATCAATGTGG+AGG | + | chr5_4:44428916-44428935 | Msa0852980:CDS | 45.0% | |
| TCTAGTGGCCAGATCACAAT+TGG | + | chr5_4:44428961-44428980 | Msa0852980:CDS | 45.0% | |
| GGCTTCACCAATAGCAACAA+TGG | - | chr5_4:44429326-44429345 | None:intergenic | 45.0% | |
| ATCTGGAAGACCTTTGGTCT+TGG | + | chr5_4:44429453-44429472 | Msa0852980:CDS | 45.0% | |
| ! | TTGCCTGGTAGTGAAGGAAA+TGG | + | chr5_4:44429520-44429539 | Msa0852980:CDS | 45.0% |
| TTCGGGGATCATGACTTCAA+GGG | + | chr5_4:44429559-44429578 | Msa0852980:CDS | 45.0% | |
| CAGCTTGATCAACCTGTTGA+AGG | + | chr5_4:44429616-44429635 | Msa0852980:CDS | 45.0% | |
| GATGACTCCTTATTCCCTCT+TGG | + | chr5_4:44429652-44429671 | Msa0852980:CDS | 45.0% | |
| CCCATAACCAAGAGGGAATA+AGG | - | chr5_4:44429662-44429681 | None:intergenic | 45.0% | |
| AAGCTAGCCCATAACCAAGA+GGG | - | chr5_4:44429669-44429688 | None:intergenic | 45.0% | |
| TAAGCTAGCCCATAACCAAG+AGG | - | chr5_4:44429670-44429689 | None:intergenic | 45.0% | |
| !! | CTGCAGAGTTGATGTCCAAA+TGG | - | chr5_4:44425729-44425748 | None:intergenic | 45.0% |
| GTCATCTGATTGGGCTGATA+TGG | + | chr5_4:44426110-44426129 | Msa0852980:CDS | 45.0% | |
| GATTGGGCTGATATGGTTGA+CGG | + | chr5_4:44426117-44426136 | Msa0852980:CDS | 45.0% | |
| AGGTCTGCAAAGATCCTAGA+TGG | + | chr5_4:44426690-44426709 | Msa0852980:intron | 45.0% | |
| GGTCTGCAAAGATCCTAGAT+GGG | + | chr5_4:44426691-44426710 | Msa0852980:intron | 45.0% | |
| GTCTGCAAAGATCCTAGATG+GGG | + | chr5_4:44426692-44426711 | Msa0852980:CDS | 45.0% | |
| TCATAGCATCTTCCCCATCT+AGG | - | chr5_4:44426707-44426726 | None:intergenic | 45.0% | |
| CCTCCAGAAAATCATCCAAG+GGG | + | chr5_4:44426794-44426813 | Msa0852980:CDS | 45.0% | |
| ! | TAGCCCCTTGGATGATTTTC+TGG | - | chr5_4:44426800-44426819 | None:intergenic | 45.0% |
| ! | GCCTGTGCTAGACATTTTGT+TGG | + | chr5_4:44426964-44426983 | Msa0852980:CDS | 45.0% |
| ! | GGAGATGGAGGTACAGAAAA+AGG | + | chr5_4:44426985-44427004 | Msa0852980:CDS | 45.0% |
| GTCTCATATTCCAGCTGGAA+TGG | + | chr5_4:44427108-44427127 | Msa0852980:CDS | 45.0% | |
| TGGAATGGAGTCAAACTCCA+TGG | + | chr5_4:44427123-44427142 | Msa0852980:CDS | 45.0% | |
| TCGTGAACATATGCAGGTGA+TGG | + | chr5_4:44427667-44427686 | Msa0852980:intron | 45.0% | |
| ! | TGGCATCTCTAGTTCAATCG+GGG | + | chr5_4:44427723-44427742 | Msa0852980:CDS | 45.0% |
| GCATCATCAATCCTGGCTAT+TGG | - | chr5_4:44427755-44427774 | None:intergenic | 45.0% | |
| CCTTGTTCCCAAGTTTCTCA+TGG | - | chr5_4:44428346-44428365 | None:intergenic | 45.0% | |
| CCATGAGAAACTTGGGAACA+AGG | + | chr5_4:44428343-44428362 | Msa0852980:intron | 45.0% | |
| ATAGGAGGAGAGGAGTCTTA+AGG | - | chr5_4:44428608-44428627 | None:intergenic | 45.0% | |
| TAGCGTTTGTATAGGAGGAG+AGG | - | chr5_4:44428618-44428637 | None:intergenic | 45.0% | |
| TGAAGCAGTTCGAAAGTCCT+TGG | + | chr5_4:44428801-44428820 | Msa0852980:CDS | 45.0% | |
| TCCAGCAACAAGGATTCTCT+TGG | - | chr5_4:44428884-44428903 | None:intergenic | 45.0% | |
| GATATCGGGTATCAATGTGG+AGG | + | chr5_4:44428916-44428935 | Msa0852980:CDS | 45.0% | |
| TCTAGTGGCCAGATCACAAT+TGG | + | chr5_4:44428961-44428980 | Msa0852980:CDS | 45.0% | |
| GGCTTCACCAATAGCAACAA+TGG | - | chr5_4:44429326-44429345 | None:intergenic | 45.0% | |
| ATCTGGAAGACCTTTGGTCT+TGG | + | chr5_4:44429453-44429472 | Msa0852980:CDS | 45.0% | |
| ! | TTGCCTGGTAGTGAAGGAAA+TGG | + | chr5_4:44429520-44429539 | Msa0852980:CDS | 45.0% |
| TTCGGGGATCATGACTTCAA+GGG | + | chr5_4:44429559-44429578 | Msa0852980:CDS | 45.0% | |
| CAGCTTGATCAACCTGTTGA+AGG | + | chr5_4:44429616-44429635 | Msa0852980:CDS | 45.0% | |
| GATGACTCCTTATTCCCTCT+TGG | + | chr5_4:44429652-44429671 | Msa0852980:CDS | 45.0% | |
| CCCATAACCAAGAGGGAATA+AGG | - | chr5_4:44429662-44429681 | None:intergenic | 45.0% | |
| AAGCTAGCCCATAACCAAGA+GGG | - | chr5_4:44429669-44429688 | None:intergenic | 45.0% | |
| TAAGCTAGCCCATAACCAAG+AGG | - | chr5_4:44429670-44429689 | None:intergenic | 45.0% | |
| ! | GGTTGACGGTTTTCAGAAGC+TGG | + | chr5_4:44426131-44426150 | Msa0852980:CDS | 50.0% |
| AGAAGCTGGCGCTTGAATCA+CGG | + | chr5_4:44426145-44426164 | Msa0852980:CDS | 50.0% | |
| ! | TTTCCTCACAACGTTGGCCT+CGG | + | chr5_4:44426237-44426256 | Msa0852980:CDS | 50.0% |
| ACACAAACCTAGTTGCTCCG+AGG | - | chr5_4:44426257-44426276 | None:intergenic | 50.0% | |
| AAATGCACATGACCCCTCAC+AGG | - | chr5_4:44426409-44426428 | None:intergenic | 50.0% | |
| ! | CCCCTTGGATGATTTTCTGG+AGG | - | chr5_4:44426797-44426816 | None:intergenic | 50.0% |
| GAGTTTGACTCCATTCCAGC+TGG | - | chr5_4:44427121-44427140 | None:intergenic | 50.0% | |
| ! | GGCATCTCTAGTTCAATCGG+GGG | + | chr5_4:44427724-44427743 | Msa0852980:CDS | 50.0% |
| CTCAACGGCATCATCAATCC+TGG | - | chr5_4:44427762-44427781 | None:intergenic | 50.0% | |
| !! | GGATTGATGATGCCGTTGAG+CGG | + | chr5_4:44427762-44427781 | Msa0852980:CDS | 50.0% |
| ! | GCTGGATACTGTTGGTTGCA+AGG | + | chr5_4:44427844-44427863 | Msa0852980:CDS | 50.0% |
| CAACCCGATAATCTCTTCGG+TGG | - | chr5_4:44428056-44428075 | None:intergenic | 50.0% | |
| GCCAAGAGAATCCTTGTTGC+TGG | + | chr5_4:44428880-44428899 | Msa0852980:CDS | 50.0% | |
| CAGCATGAGTTCCAGCAACA+AGG | - | chr5_4:44428894-44428913 | None:intergenic | 50.0% | |
| TCGGGTATCAATGTGGAGGA+TGG | + | chr5_4:44428920-44428939 | Msa0852980:CDS | 50.0% | |
| GATGCTGCTAAGGATGCTGT+GGG | + | chr5_4:44429229-44429248 | Msa0852980:CDS | 50.0% | |
| TCACCTCCACACTCAGCATA+GGG | - | chr5_4:44429349-44429368 | None:intergenic | 50.0% | |
| TAGAAGCTCTTGTTGCGGCA+TGG | + | chr5_4:44429497-44429516 | Msa0852980:CDS | 50.0% | |
| CTTCGGGGATCATGACTTCA+AGG | + | chr5_4:44429558-44429577 | Msa0852980:CDS | 50.0% | |
| ! | GGTTGACGGTTTTCAGAAGC+TGG | + | chr5_4:44426131-44426150 | Msa0852980:CDS | 50.0% |
| AGAAGCTGGCGCTTGAATCA+CGG | + | chr5_4:44426145-44426164 | Msa0852980:CDS | 50.0% | |
| ! | TTTCCTCACAACGTTGGCCT+CGG | + | chr5_4:44426237-44426256 | Msa0852980:CDS | 50.0% |
| ACACAAACCTAGTTGCTCCG+AGG | - | chr5_4:44426257-44426276 | None:intergenic | 50.0% | |
| AAATGCACATGACCCCTCAC+AGG | - | chr5_4:44426409-44426428 | None:intergenic | 50.0% | |
| ! | CCCCTTGGATGATTTTCTGG+AGG | - | chr5_4:44426797-44426816 | None:intergenic | 50.0% |
| GAGTTTGACTCCATTCCAGC+TGG | - | chr5_4:44427121-44427140 | None:intergenic | 50.0% | |
| ! | GGCATCTCTAGTTCAATCGG+GGG | + | chr5_4:44427724-44427743 | Msa0852980:CDS | 50.0% |
| CTCAACGGCATCATCAATCC+TGG | - | chr5_4:44427762-44427781 | None:intergenic | 50.0% | |
| !! | GGATTGATGATGCCGTTGAG+CGG | + | chr5_4:44427762-44427781 | Msa0852980:CDS | 50.0% |
| ! | GCTGGATACTGTTGGTTGCA+AGG | + | chr5_4:44427844-44427863 | Msa0852980:CDS | 50.0% |
| CAACCCGATAATCTCTTCGG+TGG | - | chr5_4:44428056-44428075 | None:intergenic | 50.0% | |
| GCCAAGAGAATCCTTGTTGC+TGG | + | chr5_4:44428880-44428899 | Msa0852980:CDS | 50.0% | |
| CAGCATGAGTTCCAGCAACA+AGG | - | chr5_4:44428894-44428913 | None:intergenic | 50.0% | |
| TCGGGTATCAATGTGGAGGA+TGG | + | chr5_4:44428920-44428939 | Msa0852980:CDS | 50.0% | |
| GATGCTGCTAAGGATGCTGT+GGG | + | chr5_4:44429229-44429248 | Msa0852980:CDS | 50.0% | |
| TCACCTCCACACTCAGCATA+GGG | - | chr5_4:44429349-44429368 | None:intergenic | 50.0% | |
| TAGAAGCTCTTGTTGCGGCA+TGG | + | chr5_4:44429497-44429516 | Msa0852980:CDS | 50.0% | |
| CTTCGGGGATCATGACTTCA+AGG | + | chr5_4:44429558-44429577 | Msa0852980:CDS | 50.0% | |
| CGAGCTTCAACCGTTTCAGC+AGG | - | chr5_4:44425829-44425848 | None:intergenic | 55.0% | |
| CTGGCGCTTGAATCACGGTT+AGG | + | chr5_4:44426150-44426169 | Msa0852980:CDS | 55.0% | |
| TCCAAGGGGCTACCCATTTG+TGG | + | chr5_4:44426808-44426827 | Msa0852980:CDS | 55.0% | |
| CCTACCTCCCAGCCACAAAT+GGG | - | chr5_4:44426823-44426842 | None:intergenic | 55.0% | |
| AATCCACATACGGGGCCATG+TGG | - | chr5_4:44427059-44427078 | None:intergenic | 55.0% | |
| GGATGCTGCTAAGGATGCTG+TGG | + | chr5_4:44429228-44429247 | Msa0852980:CDS | 55.0% | |
| TGCTAAGGATGCTGTGGGAC+AGG | + | chr5_4:44429234-44429253 | Msa0852980:CDS | 55.0% | |
| ACCTCCACACTCAGCATAGG+GGG | - | chr5_4:44429347-44429366 | None:intergenic | 55.0% | |
| CACCTCCACACTCAGCATAG+GGG | - | chr5_4:44429348-44429367 | None:intergenic | 55.0% | |
| GTCACCTCCACACTCAGCAT+AGG | - | chr5_4:44429350-44429369 | None:intergenic | 55.0% | |
| ! | GCATGGTTGCCTGGTAGTGA+AGG | + | chr5_4:44429514-44429533 | Msa0852980:CDS | 55.0% |
| CGAGCTTCAACCGTTTCAGC+AGG | - | chr5_4:44425829-44425848 | None:intergenic | 55.0% | |
| CTGGCGCTTGAATCACGGTT+AGG | + | chr5_4:44426150-44426169 | Msa0852980:CDS | 55.0% | |
| TCCAAGGGGCTACCCATTTG+TGG | + | chr5_4:44426808-44426827 | Msa0852980:CDS | 55.0% | |
| CCTACCTCCCAGCCACAAAT+GGG | - | chr5_4:44426823-44426842 | None:intergenic | 55.0% | |
| AATCCACATACGGGGCCATG+TGG | - | chr5_4:44427059-44427078 | None:intergenic | 55.0% | |
| GGATGCTGCTAAGGATGCTG+TGG | + | chr5_4:44429228-44429247 | Msa0852980:CDS | 55.0% | |
| TGCTAAGGATGCTGTGGGAC+AGG | + | chr5_4:44429234-44429253 | Msa0852980:CDS | 55.0% | |
| ACCTCCACACTCAGCATAGG+GGG | - | chr5_4:44429347-44429366 | None:intergenic | 55.0% | |
| CACCTCCACACTCAGCATAG+GGG | - | chr5_4:44429348-44429367 | None:intergenic | 55.0% | |
| GTCACCTCCACACTCAGCAT+AGG | - | chr5_4:44429350-44429369 | None:intergenic | 55.0% | |
| ! | GCATGGTTGCCTGGTAGTGA+AGG | + | chr5_4:44429514-44429533 | Msa0852980:CDS | 55.0% |
| ! | ACGTTGGCCTCGGAGCAACT+AGG | + | chr5_4:44426247-44426266 | Msa0852980:CDS | 60.0% |
| GCCACAAATGGGTAGCCCCT+TGG | - | chr5_4:44426812-44426831 | None:intergenic | 60.0% | |
| AGGGGCTACCCATTTGTGGC+TGG | + | chr5_4:44426812-44426831 | Msa0852980:CDS | 60.0% | |
| GGGGCTACCCATTTGTGGCT+GGG | + | chr5_4:44426813-44426832 | Msa0852980:CDS | 60.0% | |
| GCTACCCATTTGTGGCTGGG+AGG | + | chr5_4:44426816-44426835 | Msa0852980:CDS | 60.0% | |
| CCCATTTGTGGCTGGGAGGT+AGG | + | chr5_4:44426820-44426839 | Msa0852980:intron | 60.0% | |
| GCCTACCTCCCAGCCACAAA+TGG | - | chr5_4:44426824-44426843 | None:intergenic | 60.0% | |
| TGGCTGGGAGGTAGGCAGAT+AGG | + | chr5_4:44426828-44426847 | Msa0852980:intron | 60.0% | |
| GATCCACATGGCCCCGTATG+TGG | + | chr5_4:44427053-44427072 | Msa0852980:CDS | 60.0% | |
| !! | CGGGGGAAGTACCAATAGCC+AGG | + | chr5_4:44427741-44427760 | Msa0852980:CDS | 60.0% |
| GAAGCCCCCTATGCTGAGTG+TGG | + | chr5_4:44429340-44429359 | Msa0852980:CDS | 60.0% | |
| CTTGTTGCGGCATGGTTGCC+TGG | + | chr5_4:44429505-44429524 | Msa0852980:CDS | 60.0% | |
| ! | ACGTTGGCCTCGGAGCAACT+AGG | + | chr5_4:44426247-44426266 | Msa0852980:CDS | 60.0% |
| GCCACAAATGGGTAGCCCCT+TGG | - | chr5_4:44426812-44426831 | None:intergenic | 60.0% | |
| AGGGGCTACCCATTTGTGGC+TGG | + | chr5_4:44426812-44426831 | Msa0852980:CDS | 60.0% | |
| GGGGCTACCCATTTGTGGCT+GGG | + | chr5_4:44426813-44426832 | Msa0852980:CDS | 60.0% | |
| GCTACCCATTTGTGGCTGGG+AGG | + | chr5_4:44426816-44426835 | Msa0852980:CDS | 60.0% | |
| CCCATTTGTGGCTGGGAGGT+AGG | + | chr5_4:44426820-44426839 | Msa0852980:intron | 60.0% | |
| GCCTACCTCCCAGCCACAAA+TGG | - | chr5_4:44426824-44426843 | None:intergenic | 60.0% | |
| TGGCTGGGAGGTAGGCAGAT+AGG | + | chr5_4:44426828-44426847 | Msa0852980:intron | 60.0% | |
| GATCCACATGGCCCCGTATG+TGG | + | chr5_4:44427053-44427072 | Msa0852980:CDS | 60.0% | |
| !! | CGGGGGAAGTACCAATAGCC+AGG | + | chr5_4:44427741-44427760 | Msa0852980:CDS | 60.0% |
| GAAGCCCCCTATGCTGAGTG+TGG | + | chr5_4:44429340-44429359 | Msa0852980:CDS | 60.0% | |
| CTTGTTGCGGCATGGTTGCC+TGG | + | chr5_4:44429505-44429524 | Msa0852980:CDS | 60.0% | |
| GCTCCGAGGCCAACGTTGTG+AGG | - | chr5_4:44426243-44426262 | None:intergenic | 65.0% | |
| GCCCCCTATGCTGAGTGTGG+AGG | + | chr5_4:44429343-44429362 | Msa0852980:CDS | 65.0% | |
| GCTCCGAGGCCAACGTTGTG+AGG | - | chr5_4:44426243-44426262 | None:intergenic | 65.0% | |
| GCCCCCTATGCTGAGTGTGG+AGG | + | chr5_4:44429343-44429362 | Msa0852980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 44425600 | 44429714 | 44425600 | ID=Msa0852980;Name=Msa0852980 |
| chr5_4 | mRNA | 44425600 | 44429714 | 44425600 | ID=Msa0852980-mRNA-1;Parent=Msa0852980;Name=Msa0852980-mRNA-1;_AED=0.20;_eAED=0.20;_QI=205|0.75|0.44|1|1|1|9|0|609 |
| chr5_4 | exon | 44425600 | 44425955 | 44425600 | ID=Msa0852980-mRNA-1:exon:14023;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44426061 | 44426268 | 44426061 | ID=Msa0852980-mRNA-1:exon:14024;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44426482 | 44426572 | 44426482 | ID=Msa0852980-mRNA-1:exon:14025;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44426692 | 44426837 | 44426692 | ID=Msa0852980-mRNA-1:exon:14026;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44426951 | 44427194 | 44426951 | ID=Msa0852980-mRNA-1:exon:14027;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44427496 | 44427600 | 44427496 | ID=Msa0852980-mRNA-1:exon:14028;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44427683 | 44427865 | 44427683 | ID=Msa0852980-mRNA-1:exon:14029;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44428781 | 44428982 | 44428781 | ID=Msa0852980-mRNA-1:exon:14030;Parent=Msa0852980-mRNA-1 |
| chr5_4 | exon | 44429215 | 44429714 | 44429215 | ID=Msa0852980-mRNA-1:exon:14031;Parent=Msa0852980-mRNA-1 |
| chr5_4 | five_prime_UTR | 44425600 | 44425804 | 44425600 | ID=Msa0852980-mRNA-1:five_prime_utr;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44425805 | 44425955 | 44425805 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44426061 | 44426268 | 44426061 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44426482 | 44426572 | 44426482 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44426692 | 44426837 | 44426692 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44426951 | 44427194 | 44426951 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44427496 | 44427600 | 44427496 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44427683 | 44427865 | 44427683 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44428781 | 44428982 | 44428781 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| chr5_4 | CDS | 44429215 | 44429714 | 44429215 | ID=Msa0852980-mRNA-1:cds;Parent=Msa0852980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
