AlfalfaGEDB | Msa0835580

M. sativa cultivar zhongmu-4 / Msa0835580

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009628 GO:0036377 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0050896 GO:0051704 GO:0080167
PFAM: PF12697.10

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0835580	XP_003611634.1	97.705	305	7	0	1	305	1	305	0.0	626

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0835580	sp\|Q9SZU7\|KAI2_ARATH	77.239	268	61	0	1	268	1	268	4.92e-159	447

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0835580	G7K3X2	97.705	305	7	0	1	305	1	305	0.0	626

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0014790	Msa0835580	0.814595	1.422192e-51	-8.615850e-47
Msa0021980	Msa0835580	0.817858	2.650922e-52	-8.615850e-47
Msa0025690	Msa0835580	0.809406	1.922623e-50	-8.615850e-47
Msa0028050	Msa0835580	0.800556	1.363286e-48	-8.615850e-47
Msa0053480	Msa0835580	0.813069	3.084709e-51	-8.615850e-47
Msa0100850	Msa0835580	0.830567	2.731185e-55	-8.615850e-47
Msa0110500	Msa0835580	0.808890	2.479157e-50	-8.615850e-47
Msa0617370	Msa0835580	0.825485	4.568717e-54	-8.615850e-47
Msa0618260	Msa0835580	0.803022	4.250744e-49	-8.615850e-47
Msa0646390	Msa0835580	0.814214	1.726400e-51	-8.615850e-47
Msa0678240	Msa0835580	0.817163	3.801853e-52	-8.615850e-47
Msa0718920	Msa0835580	0.807540	4.809717e-50	-8.615850e-47
Msa0733400	Msa0835580	0.801699	7.958667e-49	-8.615850e-47
Msa0738600	Msa0835580	0.800542	1.372881e-48	-8.615850e-47
Msa0756410	Msa0835580	0.959307	2.682079e-117	-8.615850e-47
Msa0772040	Msa0835580	0.822226	2.653650e-53	-8.615850e-47
Msa0772400	Msa0835580	0.803472	3.429996e-49	-8.615850e-47
Msa0774560	Msa0835580	0.830848	2.329950e-55	-8.615850e-47
Msa0778580	Msa0835580	0.817232	3.668366e-52	-8.615850e-47
Msa0807980	Msa0835580	0.829450	5.113005e-55	-8.615850e-47
Msa0815950	Msa0835580	0.838735	2.409797e-57	-8.615850e-47
Msa0818950	Msa0835580	0.800002	1.768197e-48	-8.615850e-47
Msa0833060	Msa0835580	0.815806	7.656150e-52	-8.615850e-47
Msa0834690	Msa0835580	0.803392	3.562562e-49	-8.615850e-47
Msa0835580	Msa0837590	0.809743	1.627404e-50	-8.615850e-47
Msa0835580	Msa0839730	0.805975	1.029771e-49	-8.615850e-47
Msa0835580	Msa0840570	0.804216	2.402373e-49	-8.615850e-47
Msa0835580	Msa0840630	0.823958	1.046477e-53	-8.615850e-47
Msa0835580	Msa0841980	0.810931	9.018975e-51	-8.615850e-47
Msa0835580	Msa0849130	0.806529	7.871012e-50	-8.615850e-47
Msa0835580	Msa0849290	0.801488	8.795490e-49	-8.615850e-47
Msa0835580	Msa0852980	-0.833080	6.549503e-56	-8.615850e-47
Msa0835580	Msa0861480	0.801470	8.868876e-49	-8.615850e-47
Msa0835580	Msa0883410	0.820229	7.658692e-53	-8.615850e-47
Msa0835580	Msa0883430	0.826918	2.084341e-54	-8.615850e-47
Msa0835580	Msa0883660	0.820524	6.552600e-53	-8.615850e-47
Msa0835580	Msa0883670	0.811402	7.127965e-51	-8.615850e-47
Msa0835580	Msa0883690	0.840236	9.820859e-58	-8.615850e-47
Msa0835580	Msa0883700	0.804277	2.333609e-49	-8.615850e-47
Msa0835580	Msa0885170	0.800596	1.338017e-48	-8.615850e-47
Msa0835580	Msa0887000	0.807595	4.680736e-50	-8.615850e-47
Msa0835580	Msa0887070	0.817251	3.633892e-52	-8.615850e-47
Msa0835580	Msa0891670	0.808139	3.586289e-50	-8.615850e-47
Msa0835580	Msa0912160	0.839970	1.152166e-57	-8.615850e-47
Msa0835580	Msa0946300	0.809644	1.708832e-50	-8.615850e-47
Msa0835580	Msa0950410	0.832133	1.124781e-55	-8.615850e-47
Msa0835580	Msa0950620	0.812062	5.120171e-51	-8.615850e-47
Msa0835580	Msa0984840	0.823933	1.060444e-53	-8.615850e-47
Msa0835580	Msa0984850	0.816267	6.038181e-52	-8.615850e-47
Msa0835580	Msa0985430	0.829122	6.142378e-55	-8.615850e-47
Msa0835580	Msa0986870	0.807370	5.225649e-50	-8.615850e-47
Msa0835580	Msa0988500	0.810897	9.169757e-51	-8.615850e-47
Msa0835580	Msa1008960	0.819589	1.072615e-52	-8.615850e-47
Msa0835580	Msa1009150	0.811734	6.038006e-51	-8.615850e-47
Msa0835580	Msa1009170	0.844048	9.620712e-59	-8.615850e-47
Msa0835580	Msa1050320	0.804347	2.256990e-49	-8.615850e-47
Msa0835580	Msa1064920	0.804837	1.783306e-49	-8.615850e-47
Msa0835580	Msa1071310	0.814190	1.747567e-51	-8.615850e-47
Msa0835580	Msa1081530	0.816733	4.749095e-52	-8.615850e-47
Msa0835580	Msa1098350	0.819062	1.414854e-52	-8.615850e-47
Msa0835580	Msa1113210	0.802795	4.736191e-49	-8.615850e-47
Msa0835580	Msa1113280	0.824543	7.625806e-54	-8.615850e-47
Msa0835580	Msa1135660	0.834088	3.669207e-56	-8.615850e-47
Msa0835580	Msa1138480	0.826646	2.420198e-54	-8.615850e-47
Msa0835580	Msa1138490	0.812749	3.625546e-51	-8.615850e-47
Msa0835580	Msa1182780	0.824298	8.705840e-54	-8.615850e-47
Msa0835580	Msa1184580	0.815776	7.773270e-52	-8.615850e-47
Msa0835580	Msa1186010	0.829196	5.892400e-55	-8.615850e-47
Msa0835580	Msa1188820	0.804014	2.646563e-49	-8.615850e-47
Msa0835580	Msa1199750	0.814484	1.504789e-51	-8.615850e-47
Msa0835580	Msa1204430	0.844757	6.204453e-59	-8.615850e-47
Msa0835580	Msa1208250	0.858411	8.391047e-63	-8.615850e-47
Msa0835580	Msa1209790	0.808229	3.432566e-50	-8.615850e-47
Msa0835580	Msa1212740	0.819431	1.165969e-52	-8.615850e-47
Msa0835580	Msa1212960	0.818535	1.863665e-52	-8.615850e-47
Msa0835580	Msa1223510	0.802335	5.891355e-49	-8.615850e-47
Msa0835580	Msa1242430	0.839038	2.012426e-57	-8.615850e-47
Msa0835580	Msa1244710	0.801557	8.511944e-49	-8.615850e-47
Msa0835580	Msa1258200	0.824981	6.012183e-54	-8.615850e-47
Msa0835580	Msa1275340	0.804546	2.051284e-49	-8.615850e-47
Msa0835580	Msa1276070	0.829968	3.824388e-55	-8.615850e-47
Msa0835580	Msa1279310	0.833751	4.453996e-56	-8.615850e-47
Msa0835580	Msa1279860	0.816858	4.453489e-52	-8.615850e-47
Msa0835580	Msa1279870	0.824177	9.298813e-54	-8.615850e-47
Msa0835580	Msa1287160	0.811359	7.281443e-51	-8.615850e-47
Msa0835580	Msa1287690	0.817887	2.611579e-52	-8.615850e-47
Msa0835580	Msa1287710	0.806498	7.987941e-50	-8.615850e-47
Msa0835580	Msa1289480	0.815250	1.017736e-51	-8.615850e-47
Msa0835580	Msa1291140	0.801320	9.519726e-49	-8.615850e-47
Msa0835580	Msa1296650	0.825801	3.844492e-54	-8.615850e-47
Msa0835580	Msa1328600	0.824400	8.241254e-54	-8.615850e-47
Msa0835580	Msa1331610	0.803231	3.847663e-49	-8.615850e-47
Msa0835580	Msa1336460	-0.821994	3.002719e-53	-8.615850e-47
Msa0835580	Msa1340880	0.807539	4.811153e-50	-8.615850e-47
Msa0835580	Msa1352060	0.804983	1.662195e-49	-8.615850e-47
Msa0835580	Msa1357380	0.863546	2.304902e-64	-8.615850e-47
Msa0835580	Msa1357720	0.819805	9.578854e-53	-8.615850e-47
Msa0835580	Msa1366700	0.860208	2.425170e-63	-8.615850e-47
Msa0835580	Msa1384980	0.820567	6.407659e-53	-8.615850e-47
Msa0835580	Msa1433380	0.807835	4.162329e-50	-8.615850e-47
Msa0835580	Msa1443440	0.807971	3.894357e-50	-8.615850e-47
Msa0835580	Msa1459170	0.815341	9.713600e-52	-8.615850e-47
Msa0835580	Msa1459630	0.815692	8.115313e-52	-8.615850e-47
Msa0164630	Msa0835580	0.800658	1.299857e-48	-8.615850e-47
Msa0218860	Msa0835580	0.810053	1.395180e-50	-8.615850e-47
Msa0222720	Msa0835580	0.826381	2.799228e-54	-8.615850e-47
Msa0369750	Msa0835580	0.816403	5.629790e-52	-8.615850e-47
Msa0372990	Msa0835580	0.803186	3.931724e-49	-8.615850e-47
Msa0389050	Msa0835580	0.835487	1.630950e-56	-8.615850e-47
Msa0398850	Msa0835580	0.811236	7.744985e-51	-8.615850e-47
Msa0401570	Msa0835580	0.841478	4.639261e-58	-8.615850e-47
Msa0406540	Msa0835580	0.807390	5.173440e-50	-8.615850e-47
Msa0408160	Msa0835580	0.840421	8.783881e-58	-8.615850e-47
Msa0410960	Msa0835580	0.830793	2.403811e-55	-8.615850e-47
Msa0429130	Msa0835580	0.801749	7.775723e-49	-8.615850e-47
Msa0439700	Msa0835580	0.811467	6.899228e-51	-8.615850e-47
Msa0448400	Msa0835580	0.814349	1.611840e-51	-8.615850e-47
Msa0453220	Msa0835580	0.808014	3.813645e-50	-8.615850e-47
Msa0463960	Msa0835580	0.823667	1.224191e-53	-8.615850e-47
Msa0473450	Msa0835580	0.803068	4.157829e-49	-8.615850e-47
Msa0251140	Msa0835580	0.807916	4.001476e-50	-8.615850e-47
Msa0254190	Msa0835580	0.809840	1.551235e-50	-8.615850e-47
Msa0264020	Msa0835580	0.805832	1.103188e-49	-8.615850e-47
Msa0264240	Msa0835580	0.803607	3.215951e-49	-8.615850e-47
Msa0266380	Msa0835580	0.814760	1.307618e-51	-8.615850e-47
Msa0311330	Msa0835580	0.821063	4.927587e-53	-8.615850e-47
Msa0339560	Msa0835580	0.808184	3.509206e-50	-8.615850e-47
Msa0351220	Msa0835580	0.808863	2.512821e-50	-8.615850e-47
Msa0351230	Msa0835580	0.822632	2.135396e-53	-8.615850e-47
Msa0358720	Msa0835580	0.807671	4.509698e-50	-8.615850e-47
Msa0363440	Msa0835580	0.815222	1.032343e-51	-8.615850e-47
Msa0496460	Msa0835580	0.815850	7.482309e-52	-8.615850e-47
Msa0503620	Msa0835580	0.816236	6.135371e-52	-8.615850e-47
Msa0509510	Msa0835580	0.833116	6.414237e-56	-8.615850e-47
Msa0520810	Msa0835580	0.807882	4.068292e-50	-8.615850e-47
Msa0539400	Msa0835580	0.829055	6.374878e-55	-8.615850e-47
Msa0553290	Msa0835580	0.821668	3.572678e-53	-8.615850e-47
Msa0555980	Msa0835580	0.800995	1.109346e-48	-8.615850e-47
Msa0563140	Msa0835580	0.801768	7.705913e-49	-8.615850e-47
Msa0565530	Msa0835580	0.828137	1.062706e-54	-8.615850e-47
Msa0568120	Msa0835580	0.842357	2.716495e-58	-8.615850e-47
Msa0587070	Msa0835580	0.803558	3.291532e-49	-8.615850e-47
Msa0592540	Msa0835580	0.802597	5.203495e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0835580	MtrunA17_Chr5g0401521	97.705	305	7	0	1	305	1	305	0.0	626
Msa0835580	MtrunA17_Chr4g0053741	78.341	217	47	0	52	268	1	217	4.21e-132	374
Msa0835580	MtrunA17_Chr1g0152551	57.831	249	103	2	6	253	8	255	1.09e-108	316
Msa0835580	MtrunA17_Chr3g0093821	38.776	245	148	2	9	252	13	256	8.53e-67	210
Msa0835580	MtrunA17_Chr6g0485021	39.764	254	150	3	9	260	22	274	7.66e-65	205

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0835580	AT4G37470.1	77.239	268	61	0	1	268	1	268	5.00e-160	447
Msa0835580	AT3G03990.1	56.757	259	111	1	6	264	8	265	1.13e-107	314
Msa0835580	AT3G24420.1	40.840	262	152	3	7	266	13	273	1.26e-74	230

Find 121 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAAGTCACGTCGTTATATT+TGG	0.164093	5_4:-8983665	None:intergenic
TCCTTCTTCACACTAGAAAA+TGG	0.169184	5_4:-8987023	None:intergenic
CTTAAACTTGTCATGGTTTC+CGG	0.180279	5_4:+8984123	Msa0835580:CDS
CGTTATATTTGGACTTATTT+AGG	0.181448	5_4:-8983654	None:intergenic
CAGCCATAGCGTTGAATAAT+TGG	0.189658	5_4:-8984819	None:intergenic
TTATGATTTACTTGCTATTT+TGG	0.190068	5_4:+8984008	Msa0835580:CDS
TAACAAATTCAGTTTATATT+TGG	0.197726	5_4:+8987468	Msa0835580:three_prime_UTR
TTGATGAAGCCTCTGGATTT+TGG	0.228850	5_4:-8986826	None:intergenic
CATTGGTGGGTGATTAATTA+AGG	0.234862	5_4:+8987193	Msa0835580:three_prime_UTR
CTCTCAGAATCAAAATATTC+AGG	0.252034	5_4:-8983961	None:intergenic
AATTACAAAGCTTGGTGTTA+TGG	0.253089	5_4:+8984844	Msa0835580:CDS
AGTTGTGTGCAACCGAAATT+TGG	0.257977	5_4:+8987611	Msa0835580:three_prime_UTR
CGGAAACCATGACAAGTTTA+AGG	0.259764	5_4:-8984122	None:intergenic
GGCGGTTCCGGTGGTGGTTT+CGG	0.295547	5_4:+8985053	Msa0835580:CDS
GGCTTCATCCTTGATGAAAA+TGG	0.296110	5_4:+8986868	Msa0835580:CDS
ATAGTTCTAGCTCATGGATT+TGG	0.302677	5_4:+8983844	Msa0835580:CDS
CTCACCAGATATTGTTATTC+CGG	0.306476	5_4:+8985152	Msa0835580:CDS
CGCAATATCTCAAAATTTGA+TGG	0.307482	5_4:-8987740	None:intergenic
AGGATTAAGTTAACCATGAT+TGG	0.311952	5_4:+8987243	Msa0835580:three_prime_UTR
CGCTCCACTGGCTGTGGGTG+GGG	0.319640	5_4:+8984870	Msa0835580:CDS
AGCCACATCTTAGAGATATT+TGG	0.323290	5_4:-8983614	None:intergenic
TATCTAGTGGGTGATTCATT+AGG	0.329783	5_4:+8987223	Msa0835580:three_prime_UTR
GATTACCCTTCTCCTTCTTC+AGG	0.334706	5_4:-8986971	None:intergenic
GAGAGACATTCAAGCTTAGA+AGG	0.335053	5_4:+8983979	Msa0835580:CDS
ATGGAAAGGACAAATTTATA+CGG	0.335709	5_4:-8987721	None:intergenic
AACTATAATCAGCCATATTT+CGG	0.336686	5_4:-8987592	None:intergenic
TACTAATTACCTTGGTGAAC+CGG	0.348114	5_4:-8984142	None:intergenic
CATTCTGTTTCTGCAATGAT+TGG	0.356191	5_4:+8984066	Msa0835580:CDS
ACTGGCTGTGGGTGGGGACA+TGG	0.358536	5_4:+8984876	Msa0835580:CDS
CCTTCTTCACACTAGAAAAT+GGG	0.369655	5_4:-8987022	None:intergenic
TTGTCTAGCAAACTACGTTT+TGG	0.373292	5_4:+8987143	Msa0835580:three_prime_UTR
TGAGAAAGATATGGCGGTTC+CGG	0.374023	5_4:+8985041	Msa0835580:CDS
TCATACAACCATCCAAATTT+CGG	0.377029	5_4:-8987623	None:intergenic
ATTCAACGAGTCAAATTGAT+TGG	0.378741	5_4:-8987435	None:intergenic
ATTGAATCTTGCGTATTTGT+TGG	0.380353	5_4:+8984042	Msa0835580:CDS
TTGTGTGCGCAACCGAAATA+TGG	0.381887	5_4:+8987580	Msa0835580:three_prime_UTR
TTGCTAGCTAAGATAAGTTA+AGG	0.381948	5_4:+8986946	Msa0835580:three_prime_UTR
GGAAAGTGTGGTAGTTTCTC+TGG	0.388541	5_4:-8986805	None:intergenic
AACACCGGAATAACAATATC+TGG	0.403561	5_4:-8985156	None:intergenic
TTGAACGATGTGAATTACTT+TGG	0.403798	5_4:+8984772	Msa0835580:CDS
TTTAATCAAGCACATAAATA+AGG	0.403903	5_4:-8987791	None:intergenic
ATTCACCGACTATGTGAATC+TGG	0.414568	5_4:-8983687	None:intergenic
GAATCATATTTAAACATCAT+TGG	0.414670	5_4:+8987176	Msa0835580:three_prime_UTR
TTAATGGTTATGTTATGTTT+TGG	0.417924	5_4:+8987305	Msa0835580:three_prime_UTR
TCGCTCCACTGGCTGTGGGT+GGG	0.418335	5_4:+8984869	Msa0835580:CDS
GTAATTTGAATAGCCACTCT+TGG	0.431726	5_4:+8986901	Msa0835580:exon
TTTCATTGGTTAATTAAAAG+AGG	0.436166	5_4:-8983557	None:intergenic
TGGATTCGCTCCACTGGCTG+TGG	0.437225	5_4:+8984864	Msa0835580:CDS
AAAGATACGTGAGAAAATAG+AGG	0.444931	5_4:-8987117	None:intergenic
CATGGATTCAGTGGCAGTAC+AGG	0.447432	5_4:+8984894	Msa0835580:CDS
CAAAGTGTTTCCACACAGAT+TGG	0.448178	5_4:-8983873	None:intergenic
ATCAAAATATTCAGGGTTAG+TGG	0.452952	5_4:-8983953	None:intergenic
TTCGCTCCACTGGCTGTGGG+TGG	0.454426	5_4:+8984868	Msa0835580:CDS
GGATTAAGTTAACCATGATT+GGG	0.457454	5_4:+8987244	Msa0835580:three_prime_UTR
AGATATGGCGGTTCCGGTGG+TGG	0.469390	5_4:+8985047	Msa0835580:CDS
AATATAAACTGAATTTGTTA+CGG	0.472101	5_4:-8987465	None:intergenic
GTGTTATGGATTCGCTCCAC+TGG	0.474287	5_4:+8984858	Msa0835580:CDS
CGAAAATCATCAACAAGATA+AGG	0.479354	5_4:-8983898	None:intergenic
CACTCTTGGCTGATTGATGT+TGG	0.483640	5_4:+8986915	Msa0835580:three_prime_UTR
TATAAAAGAGCACCCAATCA+TGG	0.487334	5_4:-8987256	None:intergenic
TCTTATCCGTGTACCGCTCA+TGG	0.493853	5_4:-8987503	None:intergenic
TATACAAGCTGAGAAAGATA+TGG	0.495978	5_4:+8985032	Msa0835580:CDS
GAGACACTCATTTAAAATGC+AGG	0.496091	5_4:+8987406	Msa0835580:three_prime_UTR
TAAGTTAAGGGTCCTGAAGA+AGG	0.497839	5_4:+8986959	Msa0835580:three_prime_UTR
AAGTCACAACCTCACACAAA+AGG	0.500977	5_4:+8983727	Msa0835580:five_prime_UTR
TATCTCAAAATTTGATGGAA+AGG	0.505286	5_4:-8987735	None:intergenic
TGGCTGAAAATTACAAAGCT+TGG	0.506303	5_4:+8984836	Msa0835580:CDS
AGGTACATAGTTCTAGCTCA+TGG	0.516768	5_4:+8983838	Msa0835580:CDS
GAACCAATTATTCAACGCTA+TGG	0.517804	5_4:+8984816	Msa0835580:CDS
AACGATGTGAATTACTTTGG+AGG	0.518896	5_4:+8984775	Msa0835580:CDS
TCTCAGAATCAAAATATTCA+GGG	0.525099	5_4:-8983960	None:intergenic
TCATATTTAAACATCATTGG+TGG	0.526762	5_4:+8987179	Msa0835580:three_prime_UTR
GGAGTATCTTCACCAACACT+TGG	0.527353	5_4:+8985074	Msa0835580:CDS
ACAAGTTTAAGGAAAAGATC+AGG	0.531373	5_4:-8984111	None:intergenic
GACACTATTAGAGCTATGTC+TGG	0.532117	5_4:-8984946	None:intergenic
TGCTAGCTAAGATAAGTTAA+GGG	0.538690	5_4:+8986947	Msa0835580:three_prime_UTR
CATATTTAAACATCATTGGT+GGG	0.540087	5_4:+8987180	Msa0835580:three_prime_UTR
GGGTGGTCAGTCCATTGTTG+AGG	0.543499	5_4:+8985095	Msa0835580:CDS
GTGCTATTGCTTCTATTACA+CGG	0.560942	5_4:+8984088	Msa0835580:CDS
ATCCGTGTACCGCTCATGGT+GGG	0.561867	5_4:-8987499	None:intergenic
TGTTGTTCTATATGATAACA+TGG	0.566458	5_4:+8983921	Msa0835580:CDS
GGATTCGCTCCACTGGCTGT+GGG	0.566939	5_4:+8984865	Msa0835580:CDS
ATGTCCCCACCCACAGCCAG+TGG	0.567376	5_4:-8984874	None:intergenic
CAAATTTATACGGTAATGTA+CGG	0.569435	5_4:-8987711	None:intergenic
CTTCTTCACACTAGAAAATG+GGG	0.570390	5_4:-8987021	None:intergenic
CTATATGATAACATGGGTGC+TGG	0.576349	5_4:+8983928	Msa0835580:CDS
AAGGGTCCTGAAGAAGGAGA+AGG	0.578774	5_4:+8986965	Msa0835580:three_prime_UTR
GTCGAACATTGTTCAACATG+AGG	0.582241	5_4:+8984923	Msa0835580:CDS
TCAATTTGACTCGTTGAATG+TGG	0.583210	5_4:+8987439	Msa0835580:three_prime_UTR
CACCCACCATGAGCGGTACA+CGG	0.586044	5_4:+8987497	Msa0835580:three_prime_UTR
GAGTATCTTCACCAACACTT+GGG	0.588556	5_4:+8985075	Msa0835580:CDS
GAAAGATATGGCGGTTCCGG+TGG	0.592732	5_4:+8985044	Msa0835580:CDS
GGGTGGGGACATGGATTCAG+TGG	0.603042	5_4:+8984885	Msa0835580:CDS
TATCCGTGTACCGCTCATGG+TGG	0.607368	5_4:-8987500	None:intergenic
AAGATACGTGAGAAAATAGA+GGG	0.607885	5_4:-8987116	None:intergenic
GTGTGCAACCGAAATTTGGA+TGG	0.611760	5_4:+8987615	Msa0835580:three_prime_UTR
TGTCGTCATGACCTCAACAA+TGG	0.617524	5_4:-8985106	None:intergenic
GTTGAGGTCATGACGACAGA+TGG	0.622760	5_4:+8985111	Msa0835580:CDS
ATAACAAGTATTTACCTCGT+GGG	0.628025	5_4:-8985207	None:intergenic
TATCTTCACCAACACTTGGG+TGG	0.629076	5_4:+8985078	Msa0835580:CDS
CACCAAATATCTCTAAGATG+TGG	0.632332	5_4:+8983612	Msa0835580:five_prime_UTR
CATATGAAAATGCATGCTCA+CGG	0.637512	5_4:+8987647	Msa0835580:three_prime_UTR
TATGACAAGGCACAGTAACA+AGG	0.637592	5_4:-8985008	None:intergenic
CAACATCAATCAGCCAAGAG+TGG	0.646769	5_4:-8986914	None:intergenic
AGGGTCCTGAAGAAGGAGAA+GGG	0.653111	5_4:+8986966	Msa0835580:three_prime_UTR
ACTTTCCAGATTCACATAGT+CGG	0.653804	5_4:+8983682	Msa0835580:five_prime_UTR
AGATACTCCGAAACCACCAC+CGG	0.658384	5_4:-8985060	None:intergenic
ACATAGCTCTAATAGTGTCA+CGG	0.660027	5_4:+8984950	Msa0835580:CDS
TCATGGTTTCCGGTTCACCA+AGG	0.661388	5_4:+8984133	Msa0835580:CDS
CCACACTTTCCAAAATCCAG+AGG	0.663526	5_4:+8986817	Msa0835580:CDS
GTATTATCACCCACCATGAG+CGG	0.666097	5_4:+8987490	Msa0835580:three_prime_UTR
TGGACTGACCACCCAAGTGT+TGG	0.685657	5_4:-8985086	None:intergenic
AACTTAATATTGAGCCCACG+AGG	0.689184	5_4:+8985193	Msa0835580:CDS
ACAAGCTGAGAAAGATATGG+CGG	0.694733	5_4:+8985035	Msa0835580:CDS
TCAGCTTGTATAATATGACA+AGG	0.695896	5_4:-8985021	None:intergenic
GTGGCTCTACTTGTTCCTCG+TGG	0.700498	5_4:+8983631	Msa0835580:five_prime_UTR
TGAATGTGTCTAAGCAACAC+CGG	0.702558	5_4:-8985171	None:intergenic
TTGGAACAGACCAATCTGTG+TGG	0.709650	5_4:+8983863	Msa0835580:CDS
GTTGTTCTATATGATAACAT+GGG	0.717956	5_4:+8983922	Msa0835580:CDS
ATATCTGGTGAGCTTAACTG+CGG	0.718673	5_4:-8985141	None:intergenic
TTGGACTTATTTAGGCCACG+AGG	0.761120	5_4:-8983646	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTAAAAAAAAAACGT+TGG	+	chr5_4:8986228-8986247	Msa0835580:intron	10.0%
!!	GAAAAATAATGAAATTTCAT+TGG	-	chr5_4:8983574-8983593	None:intergenic	15.0%
!!	AAAATTGTAACATTGTTTAA+TGG	+	chr5_4:8984191-8984210	Msa0835580:intron	15.0%
!!	TATCAAATTTCATATTACTA+GGG	-	chr5_4:8984576-8984595	None:intergenic	15.0%
!!	ATATCAAATTTCATATTACT+AGG	-	chr5_4:8984577-8984596	None:intergenic	15.0%
!!	AATATGAAATTTGATATAGT+TGG	+	chr5_4:8984580-8984599	Msa0835580:intron	15.0%
!!	AATTGAATATAGAATAAAAC+AGG	-	chr5_4:8985710-8985729	None:intergenic	15.0%
!!	TTGTGATTTAAATTTAATTG+TGG	+	chr5_4:8985751-8985770	Msa0835580:intron	15.0%
!!	ATTTAAATTTAATTGTGGTA+TGG	+	chr5_4:8985756-8985775	Msa0835580:intron	15.0%
!!	TTAATATGATTGAAAATACA+TGG	-	chr5_4:8985986-8986005	None:intergenic	15.0%
!!!	ATTTTCAATCATATTAAATG+AGG	+	chr5_4:8985989-8986008	Msa0835580:intron	15.0%
!!!	AATATTGACTTGTAAAAAAT+TGG	+	chr5_4:8986166-8986185	Msa0835580:intron	15.0%
!!!	CTAATAGTTTTTTTTTTTGT+AGG	-	chr5_4:8986264-8986283	None:intergenic	15.0%
!!	CTACAAAAAAAAAAACTATT+AGG	+	chr5_4:8986262-8986281	Msa0835580:intron	15.0%
!!!	TATTTTCTGTTAGTTAAATA+AGG	-	chr5_4:8986289-8986308	None:intergenic	15.0%
!!!	TTTTATTTTCAAATTCTCAT+AGG	-	chr5_4:8986631-8986650	None:intergenic	15.0%
!!!	TACTTTTTTTTTTCTAACAA+TGG	+	chr5_4:8986776-8986795	Msa0835580:intron	15.0%
!!!	AATATAAACTGAATTTGTTA+CGG	-	chr5_4:8987468-8987487	None:intergenic	15.0%
!!	TAACAAATTCAGTTTATATT+TGG	+	chr5_4:8987468-8987487	Msa0835580:three_prime_UTR	15.0%
!!!	TTTCATTGGTTAATTAAAAG+AGG	-	chr5_4:8983560-8983579	None:intergenic	20.0%
!!	ATTGTGTAAACAACAAAAAA+TGG	+	chr5_4:8983768-8983787	Msa0835580:exon	20.0%
!!	TTGTGTAAACAACAAAAAAT+GGG	+	chr5_4:8983769-8983788	Msa0835580:exon	20.0%
!!!	TTATGATTTACTTGCTATTT+TGG	+	chr5_4:8984008-8984027	Msa0835580:CDS	20.0%
!!	ATAAAACTTACTAATTACCT+TGG	-	chr5_4:8984153-8984172	None:intergenic	20.0%
!!	TGAACAATAAACACAAAATT+TGG	+	chr5_4:8984223-8984242	Msa0835580:intron	20.0%
!!!	AGATTTTAAAAAAGGGAAAA+TGG	+	chr5_4:8984291-8984310	Msa0835580:intron	20.0%
!!	AATAATCAAGAGAAATGTAA+GGG	-	chr5_4:8984399-8984418	None:intergenic	20.0%
!!	AAATAATCAAGAGAAATGTA+AGG	-	chr5_4:8984400-8984419	None:intergenic	20.0%
!!!	TACATTTCTCTTGATTATTT+TGG	+	chr5_4:8984400-8984419	Msa0835580:intron	20.0%
!!!	TTTTAGACATAGTTTGAATT+TGG	+	chr5_4:8984458-8984477	Msa0835580:intron	20.0%
!!	AAAAACATAAAACATCTCAA+TGG	-	chr5_4:8984527-8984546	None:intergenic	20.0%
!!	TTATTATTGTTAAGCAACTT+AGG	-	chr5_4:8984649-8984668	None:intergenic	20.0%
!!	TGAAATCTAAATCACAATTA+TGG	-	chr5_4:8985243-8985262	None:intergenic	20.0%
!!!	TAAGCAAATTTTATTAAGCT+AGG	-	chr5_4:8985656-8985675	None:intergenic	20.0%
!!	ATTTAAATCACAAACAAACA+AGG	-	chr5_4:8985744-8985763	None:intergenic	20.0%
!!!	AATTTATTTTCTCAACCAAT+TGG	+	chr5_4:8985842-8985861	Msa0835580:intron	20.0%
!!!	GTTTTAAGTTAAAACTCTTA+AGG	+	chr5_4:8986011-8986030	Msa0835580:intron	20.0%
!!	TATACTATTTACTCAACAAA+AGG	+	chr5_4:8986097-8986116	Msa0835580:intron	20.0%
!!	TACAATTCCATAATCAAATT+AGG	+	chr5_4:8986307-8986326	Msa0835580:intron	20.0%
!!	TGAAATTCCTAATTTGATTA+TGG	-	chr5_4:8986317-8986336	None:intergenic	20.0%
!!	ATACATATATCATTCATATG+TGG	+	chr5_4:8986346-8986365	Msa0835580:intron	20.0%
!!	AAATAGTCATATCTAAACAA+AGG	+	chr5_4:8986494-8986513	Msa0835580:intron	20.0%
!!	TAAATGTTTATCCACAAATT+AGG	+	chr5_4:8986545-8986564	Msa0835580:intron	20.0%
!!	GAATCATATTTAAACATCAT+TGG	+	chr5_4:8987176-8987195	Msa0835580:three_prime_UTR	20.0%
!!!	TTAATGGTTATGTTATGTTT+TGG	+	chr5_4:8987305-8987324	Msa0835580:three_prime_UTR	20.0%
!!	TTTAATCAAGCACATAAATA+AGG	-	chr5_4:8987794-8987813	None:intergenic	20.0%
!	CGTTATATTTGGACTTATTT+AGG	-	chr5_4:8983657-8983676	None:intergenic	25.0%
!	TGTTGTTCTATATGATAACA+TGG	+	chr5_4:8983921-8983940	Msa0835580:CDS	25.0%
!	GTTGTTCTATATGATAACAT+GGG	+	chr5_4:8983922-8983941	Msa0835580:CDS	25.0%
!	TCTCAGAATCAAAATATTCA+GGG	-	chr5_4:8983963-8983982	None:intergenic	25.0%
!!!	AGGAGTAACAATATTTTAAG+TGG	-	chr5_4:8984325-8984344	None:intergenic	25.0%
!!!	ACTCCTTTTTTTTTATACCT+AGG	+	chr5_4:8984339-8984358	Msa0835580:intron	25.0%
!	GAACCTAGGTATAAAAAAAA+AGG	-	chr5_4:8984345-8984364	None:intergenic	25.0%
!	AATGATATCTAATTGAACCT+AGG	-	chr5_4:8984359-8984378	None:intergenic	25.0%
!	TCGACTATAAGTATATAGTT+TGG	+	chr5_4:8984425-8984444	Msa0835580:intron	25.0%
!!	TTTTATATGTGATTGTGACA+TGG	+	chr5_4:8984724-8984743	Msa0835580:intron	25.0%
!!!	GTTTATTTTCTCTTTGAGTT+AGG	+	chr5_4:8984746-8984765	Msa0835580:intron	25.0%
!	ATTTCACTCAATCATAGTTA+GGG	+	chr5_4:8985257-8985276	Msa0835580:intron	25.0%
!!!	ACTTCTGTACTGTTTTATTA+TGG	+	chr5_4:8985919-8985938	Msa0835580:intron	25.0%
!	AAAAAAAAAACGTTGGAACT+TGG	+	chr5_4:8986235-8986254	Msa0835580:intron	25.0%
!	GAGGAAAATTTGATTGAAAA+TGG	+	chr5_4:8986436-8986455	Msa0835580:intron	25.0%
!!	CTATTTGTTGAACAATTTGT+TGG	-	chr5_4:8986480-8986499	None:intergenic	25.0%
!	AAGACTGATATAACTAATTG+AGG	-	chr5_4:8986675-8986694	None:intergenic	25.0%
!	AACAAAAACAACAAATACAG+AGG	+	chr5_4:8986847-8986866	Msa0835580:CDS	25.0%
!	TCATATTTAAACATCATTGG+TGG	+	chr5_4:8987179-8987198	Msa0835580:three_prime_UTR	25.0%
!	CATATTTAAACATCATTGGT+GGG	+	chr5_4:8987180-8987199	Msa0835580:three_prime_UTR	25.0%
!	AACTATAATCAGCCATATTT+CGG	-	chr5_4:8987595-8987614	None:intergenic	25.0%
!!!	TCGTACTTTGTGTTTATTTT+AGG	+	chr5_4:8987675-8987694	Msa0835580:three_prime_UTR	25.0%
!!!	TGTTTATTTTAGGTTTCAAG+TGG	+	chr5_4:8987685-8987704	Msa0835580:three_prime_UTR	25.0%
!	CAAATTTATACGGTAATGTA+CGG	-	chr5_4:8987714-8987733	None:intergenic	25.0%
!	ATGGAAAGGACAAATTTATA+CGG	-	chr5_4:8987724-8987743	None:intergenic	25.0%
!	TATCTCAAAATTTGATGGAA+AGG	-	chr5_4:8987738-8987757	None:intergenic	25.0%
	ACAACAAAAAATGGGAATAG+TGG	+	chr5_4:8983777-8983796	Msa0835580:exon	30.0%
!!!	AAGTTTTAGGAACAGGAAAT+AGG	+	chr5_4:8983818-8983837	Msa0835580:CDS	30.0%
	CGAAAATCATCAACAAGATA+AGG	-	chr5_4:8983901-8983920	None:intergenic	30.0%
	ATCAAAATATTCAGGGTTAG+TGG	-	chr5_4:8983956-8983975	None:intergenic	30.0%
	CTCTCAGAATCAAAATATTC+AGG	-	chr5_4:8983964-8983983	None:intergenic	30.0%
	ATTGAATCTTGCGTATTTGT+TGG	+	chr5_4:8984042-8984061	Msa0835580:CDS	30.0%
	ACAAGTTTAAGGAAAAGATC+AGG	-	chr5_4:8984114-8984133	None:intergenic	30.0%
!	TCTTTTCCTTAAACTTGTCA+TGG	+	chr5_4:8984116-8984135	Msa0835580:CDS	30.0%
	TCAATCAATTCAACTTTAGC+TGG	+	chr5_4:8984487-8984506	Msa0835580:intron	30.0%
	CAATCAATTCAACTTTAGCT+GGG	+	chr5_4:8984488-8984507	Msa0835580:intron	30.0%
!!!	TGTTTTTGTTGTTAACGTGT+CGG	+	chr5_4:8984540-8984559	Msa0835580:intron	30.0%
	TATTGTTAAGCAACTTAGGT+AGG	-	chr5_4:8984645-8984664	None:intergenic	30.0%
	TTGAACGATGTGAATTACTT+TGG	+	chr5_4:8984772-8984791	Msa0835580:CDS	30.0%
!!	AATTACAAAGCTTGGTGTTA+TGG	+	chr5_4:8984844-8984863	Msa0835580:CDS	30.0%
	TCAGCTTGTATAATATGACA+AGG	-	chr5_4:8985024-8985043	None:intergenic	30.0%
	TATACAAGCTGAGAAAGATA+TGG	+	chr5_4:8985032-8985051	Msa0835580:CDS	30.0%
	ATAACAAGTATTTACCTCGT+GGG	-	chr5_4:8985210-8985229	None:intergenic	30.0%
	AATAACAAGTATTTACCTCG+TGG	-	chr5_4:8985211-8985230	None:intergenic	30.0%
	GATTTCACTCAATCATAGTT+AGG	+	chr5_4:8985256-8985275	Msa0835580:intron	30.0%
!!	TCTGTACTGTTTTATTATGG+CGG	+	chr5_4:8985922-8985941	Msa0835580:intron	30.0%
	TTCCTATTCTATCGATGAAT+TGG	+	chr5_4:8986055-8986074	Msa0835580:intron	30.0%
	ACTATTTACTCAACAAAAGG+AGG	+	chr5_4:8986100-8986119	Msa0835580:intron	30.0%
	ACAAGTCAATATTTCAGCTT+AGG	-	chr5_4:8986159-8986178	None:intergenic	30.0%
!	TCTGGTTAACAATTTGCTTA+AGG	-	chr5_4:8986400-8986419	None:intergenic	30.0%
	TCATACATAAGAGTAAAGTC+TGG	-	chr5_4:8986418-8986437	None:intergenic	30.0%
	AGACTTTACTCTTATGTATG+AGG	+	chr5_4:8986417-8986436	Msa0835580:intron	30.0%
	TAGTCATATCTAAACAAAGG+TGG	+	chr5_4:8986497-8986516	Msa0835580:intron	30.0%
	TTGCTAGCTAAGATAAGTTA+AGG	+	chr5_4:8986946-8986965	Msa0835580:three_prime_UTR	30.0%
	TGCTAGCTAAGATAAGTTAA+GGG	+	chr5_4:8986947-8986966	Msa0835580:three_prime_UTR	30.0%
	AAGATACGTGAGAAAATAGA+GGG	-	chr5_4:8987119-8987138	None:intergenic	30.0%
	AAAGATACGTGAGAAAATAG+AGG	-	chr5_4:8987120-8987139	None:intergenic	30.0%
!	TTAAGGATCGTTTTATCTAG+TGG	+	chr5_4:8987210-8987229	Msa0835580:three_prime_UTR	30.0%
!	TAAGGATCGTTTTATCTAGT+GGG	+	chr5_4:8987211-8987230	Msa0835580:three_prime_UTR	30.0%
	AGGATTAAGTTAACCATGAT+TGG	+	chr5_4:8987243-8987262	Msa0835580:three_prime_UTR	30.0%
	GGATTAAGTTAACCATGATT+GGG	+	chr5_4:8987244-8987263	Msa0835580:three_prime_UTR	30.0%
!!	GTTCTGTATGCATGTTTTAA+TGG	+	chr5_4:8987289-8987308	Msa0835580:three_prime_UTR	30.0%
	ATTCAACGAGTCAAATTGAT+TGG	-	chr5_4:8987438-8987457	None:intergenic	30.0%
!!	AAGTCTAACTACTTTTCACA+AGG	-	chr5_4:8987541-8987560	None:intergenic	30.0%
	TCATACAACCATCCAAATTT+CGG	-	chr5_4:8987626-8987645	None:intergenic	30.0%
	CGCAATATCTCAAAATTTGA+TGG	-	chr5_4:8987743-8987762	None:intergenic	30.0%
	AAAAAATTGCATTCACACTC+TGG	-	chr5_4:8987828-8987847	None:intergenic	30.0%
!!	CACCAAATATCTCTAAGATG+TGG	+	chr5_4:8983612-8983631	Msa0835580:five_prime_UTR	35.0%
	AGCCACATCTTAGAGATATT+TGG	-	chr5_4:8983617-8983636	None:intergenic	35.0%
	GAAAGTCACGTCGTTATATT+TGG	-	chr5_4:8983668-8983687	None:intergenic	35.0%
	ACTTTCCAGATTCACATAGT+CGG	+	chr5_4:8983682-8983701	Msa0835580:five_prime_UTR	35.0%
!	TACGTTTTTCCTTTTGTGTG+AGG	-	chr5_4:8983739-8983758	None:intergenic	35.0%
!!!	AACGTGAAAGTTTTAGGAAC+AGG	+	chr5_4:8983811-8983830	Msa0835580:CDS	35.0%
!!	ATAGTTCTAGCTCATGGATT+TGG	+	chr5_4:8983844-8983863	Msa0835580:CDS	35.0%
!!	CATTCTGTTTCTGCAATGAT+TGG	+	chr5_4:8984066-8984085	Msa0835580:CDS	35.0%
!	GTGCTATTGCTTCTATTACA+CGG	+	chr5_4:8984088-8984107	Msa0835580:CDS	35.0%
	CTTAAACTTGTCATGGTTTC+CGG	+	chr5_4:8984123-8984142	Msa0835580:CDS	35.0%
	TACTAATTACCTTGGTGAAC+CGG	-	chr5_4:8984145-8984164	None:intergenic	35.0%
	AACGATGTGAATTACTTTGG+AGG	+	chr5_4:8984775-8984794	Msa0835580:CDS	35.0%
	GAACCAATTATTCAACGCTA+TGG	+	chr5_4:8984816-8984835	Msa0835580:CDS	35.0%
	TGGCTGAAAATTACAAAGCT+TGG	+	chr5_4:8984836-8984855	Msa0835580:CDS	35.0%
!!	ACATAGCTCTAATAGTGTCA+CGG	+	chr5_4:8984950-8984969	Msa0835580:CDS	35.0%
!	CTCACCAGATATTGTTATTC+CGG	+	chr5_4:8985152-8985171	Msa0835580:CDS	35.0%
	AACACCGGAATAACAATATC+TGG	-	chr5_4:8985159-8985178	None:intergenic	35.0%
	GACGTTAGTTGGATTAAGAT+CGG	+	chr5_4:8985279-8985298	Msa0835580:intron	35.0%
	GGATAGTTGTGTGGTAATTT+CGG	+	chr5_4:8985489-8985508	Msa0835580:intron	35.0%
	ACGATAAGGTTGTGACATAA+CGG	-	chr5_4:8985527-8985546	None:intergenic	35.0%
	ACAACCTTATCGTAGACTTT+AGG	+	chr5_4:8985534-8985553	Msa0835580:intron	35.0%
!!!	AGGAGGTTTTTTATCGAGTT+TGG	+	chr5_4:8985554-8985573	Msa0835580:intron	35.0%
!!!	GGTTTTTTATCGAGTTTGGT+TGG	+	chr5_4:8985558-8985577	Msa0835580:intron	35.0%
!	TTTTTATCGAGTTTGGTTGG+TGG	+	chr5_4:8985561-8985580	Msa0835580:intron	35.0%
	TCTGTGTGGCCTAAATTTAA+TGG	+	chr5_4:8985870-8985889	Msa0835580:intron	35.0%
	CTGTGTGGCCTAAATTTAAT+GGG	+	chr5_4:8985871-8985890	Msa0835580:intron	35.0%
	TGTGTGGCCTAAATTTAATG+GGG	+	chr5_4:8985872-8985891	Msa0835580:intron	35.0%
	GTTTGTCCCCCATTAAATTT+AGG	-	chr5_4:8985882-8985901	None:intergenic	35.0%
	TGTACTGTCTGAATCATAGT+TGG	+	chr5_4:8985953-8985972	Msa0835580:intron	35.0%
	GTACTGTCTGAATCATAGTT+GGG	+	chr5_4:8985954-8985973	Msa0835580:intron	35.0%
	GACCAATTCATCGATAGAAT+AGG	-	chr5_4:8986060-8986079	None:intergenic	35.0%
	TGAATTGGTCAAATTATGCG+CGG	+	chr5_4:8986070-8986089	Msa0835580:intron	35.0%
!!	CTTTAAGTTAACTTGCAGAG+AGG	+	chr5_4:8986123-8986142	Msa0835580:intron	35.0%
	GAAGACATGTTCCTAATTTG+TGG	-	chr5_4:8986559-8986578	None:intergenic	35.0%
	TGTCTTCCTTAGACTTTATC+TGG	+	chr5_4:8986572-8986591	Msa0835580:intron	35.0%
	AAGAAGCCAGATAAAGTCTA+AGG	-	chr5_4:8986581-8986600	None:intergenic	35.0%
!	TTAGACTTTATCTGGCTTCT+TGG	+	chr5_4:8986580-8986599	Msa0835580:intron	35.0%
	CGCACAAAATAGTTGTTCTT+TGG	+	chr5_4:8986705-8986724	Msa0835580:intron	35.0%
!	ATCTGCTTCCATTTTCATCA+AGG	-	chr5_4:8986879-8986898	None:intergenic	35.0%
	GTAATTTGAATAGCCACTCT+TGG	+	chr5_4:8986901-8986920	Msa0835580:exon	35.0%
	CTTCTTCACACTAGAAAATG+GGG	-	chr5_4:8987024-8987043	None:intergenic	35.0%
	CCTTCTTCACACTAGAAAAT+GGG	-	chr5_4:8987025-8987044	None:intergenic	35.0%
	TCCTTCTTCACACTAGAAAA+TGG	-	chr5_4:8987026-8987045	None:intergenic	35.0%
!	TTGTCTAGCAAACTACGTTT+TGG	+	chr5_4:8987143-8987162	Msa0835580:three_prime_UTR	35.0%
!	CATTGGTGGGTGATTAATTA+AGG	+	chr5_4:8987193-8987212	Msa0835580:three_prime_UTR	35.0%
!	TATCTAGTGGGTGATTCATT+AGG	+	chr5_4:8987223-8987242	Msa0835580:three_prime_UTR	35.0%
!!	TATAAAAGAGCACCCAATCA+TGG	-	chr5_4:8987259-8987278	None:intergenic	35.0%
!	GAGACACTCATTTAAAATGC+AGG	+	chr5_4:8987406-8987425	Msa0835580:three_prime_UTR	35.0%
!	TCAATTTGACTCGTTGAATG+TGG	+	chr5_4:8987439-8987458	Msa0835580:three_prime_UTR	35.0%
	CATATGAAAATGCATGCTCA+CGG	+	chr5_4:8987647-8987666	Msa0835580:three_prime_UTR	35.0%
!	ATTCACCGACTATGTGAATC+TGG	-	chr5_4:8983690-8983709	None:intergenic	40.0%
	AAGTCACAACCTCACACAAA+AGG	+	chr5_4:8983727-8983746	Msa0835580:five_prime_UTR	40.0%
!	GCTCACAACGTGAAAGTTTT+AGG	+	chr5_4:8983805-8983824	Msa0835580:CDS	40.0%
!!	AGGTACATAGTTCTAGCTCA+TGG	+	chr5_4:8983838-8983857	Msa0835580:CDS	40.0%
!	CAAAGTGTTTCCACACAGAT+TGG	-	chr5_4:8983876-8983895	None:intergenic	40.0%
	CTATATGATAACATGGGTGC+TGG	+	chr5_4:8983928-8983947	Msa0835580:CDS	40.0%
	GAGAGACATTCAAGCTTAGA+AGG	+	chr5_4:8983979-8983998	Msa0835580:CDS	40.0%
	CGGAAACCATGACAAGTTTA+AGG	-	chr5_4:8984125-8984144	None:intergenic	40.0%
!	CAGCCATAGCGTTGAATAAT+TGG	-	chr5_4:8984822-8984841	None:intergenic	40.0%
	GTCGAACATTGTTCAACATG+AGG	+	chr5_4:8984923-8984942	Msa0835580:CDS	40.0%
	GACACTATTAGAGCTATGTC+TGG	-	chr5_4:8984949-8984968	None:intergenic	40.0%
	TATGACAAGGCACAGTAACA+AGG	-	chr5_4:8985011-8985030	None:intergenic	40.0%
	ACAAGCTGAGAAAGATATGG+CGG	+	chr5_4:8985035-8985054	Msa0835580:CDS	40.0%
	GAGTATCTTCACCAACACTT+GGG	+	chr5_4:8985075-8985094	Msa0835580:CDS	40.0%
	ATATCTGGTGAGCTTAACTG+CGG	-	chr5_4:8985144-8985163	None:intergenic	40.0%
	TGAATGTGTCTAAGCAACAC+CGG	-	chr5_4:8985174-8985193	None:intergenic	40.0%
	AACTTAATATTGAGCCCACG+AGG	+	chr5_4:8985193-8985212	Msa0835580:CDS	40.0%
	TCATAGTTAGGGACGTTAGT+TGG	+	chr5_4:8985268-8985287	Msa0835580:intron	40.0%
!	ATTCTCTCTGGTGCCAATTT+GGG	-	chr5_4:8985369-8985388	None:intergenic	40.0%
	ACCTTATCGTAGACTTTAGG+AGG	+	chr5_4:8985537-8985556	Msa0835580:intron	40.0%
	ACCTCCTAAAGTCTACGATA+AGG	-	chr5_4:8985541-8985560	None:intergenic	40.0%
	CAATATGTACTTAACCCGCA+AGG	-	chr5_4:8985627-8985646	None:intergenic	40.0%
	TGGTATGGAAGAATGACAGT+GGG	+	chr5_4:8985771-8985790	Msa0835580:intron	40.0%
	CATCACTATGTTGTGGTTGT+GGG	+	chr5_4:8985811-8985830	Msa0835580:intron	40.0%
	ATCACTATGTTGTGGTTGTG+GGG	+	chr5_4:8985812-8985831	Msa0835580:intron	40.0%
	GTGTGGCCTAAATTTAATGG+GGG	+	chr5_4:8985873-8985892	Msa0835580:intron	40.0%
!	AACAGTACAGAAGTTGACTC+TGG	-	chr5_4:8985913-8985932	None:intergenic	40.0%
!	TTGATGAAGCCTCTGGATTT+TGG	-	chr5_4:8986829-8986848	None:intergenic	40.0%
!!	GTTTTTGTTGATGAAGCCTC+TGG	-	chr5_4:8986836-8986855	None:intergenic	40.0%
	GGCTTCATCCTTGATGAAAA+TGG	+	chr5_4:8986868-8986887	Msa0835580:CDS	40.0%
	TAAGTTAAGGGTCCTGAAGA+AGG	+	chr5_4:8986959-8986978	Msa0835580:three_prime_UTR	40.0%
!!	CCCATTTTCTAGTGTGAAGA+AGG	+	chr5_4:8987022-8987041	Msa0835580:three_prime_UTR	40.0%
	AGTTGTGTGCAACCGAAATT+TGG	+	chr5_4:8987611-8987630	Msa0835580:three_prime_UTR	40.0%
	TTGGACTTATTTAGGCCACG+AGG	-	chr5_4:8983649-8983668	None:intergenic	45.0%
	TTGGAACAGACCAATCTGTG+TGG	+	chr5_4:8983863-8983882	Msa0835580:CDS	45.0%
	ATTGTGTGTGTGACAGTGTG+AGG	-	chr5_4:8984256-8984275	None:intergenic	45.0%
	TGAGAAAGATATGGCGGTTC+CGG	+	chr5_4:8985041-8985060	Msa0835580:CDS	45.0%
!	GGAGTATCTTCACCAACACT+TGG	+	chr5_4:8985074-8985093	Msa0835580:CDS	45.0%
	TATCTTCACCAACACTTGGG+TGG	+	chr5_4:8985078-8985097	Msa0835580:CDS	45.0%
	TGTCGTCATGACCTCAACAA+TGG	-	chr5_4:8985109-8985128	None:intergenic	45.0%
	GCTAAATAGCCCACCCAAAT+TGG	+	chr5_4:8985353-8985372	Msa0835580:intron	45.0%
!	GATTCTCTCTGGTGCCAATT+TGG	-	chr5_4:8985370-8985389	None:intergenic	45.0%
	GCTCTACATGGATAGTTGTG+TGG	+	chr5_4:8985480-8985499	Msa0835580:intron	45.0%
!	GGAGGAAAAAGGGTACAAGA+GGG	-	chr5_4:8985606-8985625	None:intergenic	45.0%
!	AGGAGGAAAAAGGGTACAAG+AGG	-	chr5_4:8985607-8985626	None:intergenic	45.0%
!	TGTACCCTTTTTCCTCCTTG+CGG	+	chr5_4:8985609-8985628	Msa0835580:intron	45.0%
	TAACCCGCAAGGAGGAAAAA+GGG	-	chr5_4:8985616-8985635	None:intergenic	45.0%
	TTAACCCGCAAGGAGGAAAA+AGG	-	chr5_4:8985617-8985636	None:intergenic	45.0%
	TATGTACTTAACCCGCAAGG+AGG	-	chr5_4:8985624-8985643	None:intergenic	45.0%
	GTGGTATGGAAGAATGACAG+TGG	+	chr5_4:8985770-8985789	Msa0835580:intron	45.0%
	CGTTGTCCATCACTATGTTG+TGG	+	chr5_4:8985804-8985823	Msa0835580:intron	45.0%
	CCACAACCACAACATAGTGA+TGG	-	chr5_4:8985813-8985832	None:intergenic	45.0%
	CCATCACTATGTTGTGGTTG+TGG	+	chr5_4:8985810-8985829	Msa0835580:intron	45.0%
!	ACCAATTGGAGTACTCTGTG+TGG	+	chr5_4:8985856-8985875	Msa0835580:intron	45.0%
	ATTGGTCAAATTATGCGCGG+AGG	+	chr5_4:8986073-8986092	Msa0835580:intron	45.0%
!	GACTTTATCTGGCTTCTTGG+TGG	+	chr5_4:8986583-8986602	Msa0835580:intron	45.0%
!	GGAAAGTGTGGTAGTTTCTC+TGG	-	chr5_4:8986808-8986827	None:intergenic	45.0%
!!	CCTCTGGATTTTGGAAAGTG+TGG	-	chr5_4:8986820-8986839	None:intergenic	45.0%
	CCACACTTTCCAAAATCCAG+AGG	+	chr5_4:8986817-8986836	Msa0835580:CDS	45.0%
	CAACATCAATCAGCCAAGAG+TGG	-	chr5_4:8986917-8986936	None:intergenic	45.0%
	CACTCTTGGCTGATTGATGT+TGG	+	chr5_4:8986915-8986934	Msa0835580:three_prime_UTR	45.0%
	GATTACCCTTCTCCTTCTTC+AGG	-	chr5_4:8986974-8986993	None:intergenic	45.0%
	GTATTATCACCCACCATGAG+CGG	+	chr5_4:8987490-8987509	Msa0835580:three_prime_UTR	45.0%
	TTGTGTGCGCAACCGAAATA+TGG	+	chr5_4:8987580-8987599	Msa0835580:three_prime_UTR	45.0%
	GTGTGCAACCGAAATTTGGA+TGG	+	chr5_4:8987615-8987634	Msa0835580:three_prime_UTR	45.0%
!!!	TATAAAATAGATTTTAAAAA+AGG	+	chr5_4:8984283-8984302	Msa0835580:intron	5.0%
!!!	ATAAAATAGATTTTAAAAAA+GGG	+	chr5_4:8984284-8984303	Msa0835580:intron	5.0%
!!!	AAAAAAAGATTTTAAAAAAA+AGG	-	chr5_4:8985325-8985344	None:intergenic	5.0%
!!!	TATAAATTTTGTTTTTAAAA+TGG	-	chr5_4:8987857-8987876	None:intergenic	5.0%
	TCATGGTTTCCGGTTCACCA+AGG	+	chr5_4:8984133-8984152	Msa0835580:CDS	50.0%
	GTGTTATGGATTCGCTCCAC+TGG	+	chr5_4:8984858-8984877	Msa0835580:CDS	50.0%
	CATGGATTCAGTGGCAGTAC+AGG	+	chr5_4:8984894-8984913	Msa0835580:CDS	50.0%
	AGATACTCCGAAACCACCAC+CGG	-	chr5_4:8985063-8985082	None:intergenic	50.0%
	GTTGAGGTCATGACGACAGA+TGG	+	chr5_4:8985111-8985130	Msa0835580:CDS	50.0%
!	TCTCTGGTGCCAATTTGGGT+GGG	-	chr5_4:8985365-8985384	None:intergenic	50.0%
	GTCTCAGGTTCGATTCTCTC+TGG	-	chr5_4:8985381-8985400	None:intergenic	50.0%
	GAATCGAACCTGAGACCTTG+CGG	+	chr5_4:8985385-8985404	Msa0835580:intron	50.0%
!!	GTGGTATTGGCTTGGGTCTT+GGG	-	chr5_4:8985422-8985441	None:intergenic	50.0%
!!	AGAGCGTCGATGTCGTTAGA+GGG	-	chr5_4:8985465-8985484	None:intergenic	50.0%
!!	TAGAGCGTCGATGTCGTTAG+AGG	-	chr5_4:8985466-8985485	None:intergenic	50.0%
	AACGACATCGACGCTCTACA+TGG	+	chr5_4:8985468-8985487	Msa0835580:intron	50.0%
!!	ATCGAGTTTGGTTGGTGGTG+AGG	+	chr5_4:8985566-8985585	Msa0835580:intron	50.0%
	GGTACAAGAGGGCAAAAACG+CGG	-	chr5_4:8985595-8985614	None:intergenic	50.0%
!	GTACCCTTTTTCCTCCTTGC+GGG	+	chr5_4:8985610-8985629	Msa0835580:intron	50.0%
!	GCCACACAGAGTACTCCAAT+TGG	-	chr5_4:8985860-8985879	None:intergenic	50.0%
	AAGGGTCCTGAAGAAGGAGA+AGG	+	chr5_4:8986965-8986984	Msa0835580:three_prime_UTR	50.0%
	AGGGTCCTGAAGAAGGAGAA+GGG	+	chr5_4:8986966-8986985	Msa0835580:three_prime_UTR	50.0%
	TCTTATCCGTGTACCGCTCA+TGG	-	chr5_4:8987506-8987525	None:intergenic	50.0%
!	GTGGCTCTACTTGTTCCTCG+TGG	+	chr5_4:8983631-8983650	Msa0835580:five_prime_UTR	55.0%
	GTGTGTGTGACAGTGTGAGG+CGG	-	chr5_4:8984253-8984272	None:intergenic	55.0%
	GAAAGATATGGCGGTTCCGG+TGG	+	chr5_4:8985044-8985063	Msa0835580:CDS	55.0%
	TGGACTGACCACCCAAGTGT+TGG	-	chr5_4:8985089-8985108	None:intergenic	55.0%
	GGGTGGTCAGTCCATTGTTG+AGG	+	chr5_4:8985095-8985114	Msa0835580:CDS	55.0%
!	CTCTCTGGTGCCAATTTGGG+TGG	-	chr5_4:8985366-8985385	None:intergenic	55.0%
!!	GGTGGTATTGGCTTGGGTCT+TGG	-	chr5_4:8985423-8985442	None:intergenic	55.0%
	AGACCCAAGCCAATACCACC+AGG	+	chr5_4:8985423-8985442	Msa0835580:intron	55.0%
!!	TGGCCTGGTGGTATTGGCTT+GGG	-	chr5_4:8985429-8985448	None:intergenic	55.0%
!!	TTGGCCTGGTGGTATTGGCT+TGG	-	chr5_4:8985430-8985449	None:intergenic	55.0%
!!	ATGGGTTGGCCTGGTGGTAT+TGG	-	chr5_4:8985435-8985454	None:intergenic	55.0%
	TCGTTAGAGGGGGATCGGAT+GGG	-	chr5_4:8985453-8985472	None:intergenic	55.0%
	CGATGTCGTTAGAGGGGGAT+CGG	-	chr5_4:8985458-8985477	None:intergenic	55.0%
!!	AGCGTCGATGTCGTTAGAGG+GGG	-	chr5_4:8985463-8985482	None:intergenic	55.0%
!!	GAGCGTCGATGTCGTTAGAG+GGG	-	chr5_4:8985464-8985483	None:intergenic	55.0%
	ATCCGTGTACCGCTCATGGT+GGG	-	chr5_4:8987502-8987521	None:intergenic	55.0%
	TATCCGTGTACCGCTCATGG+TGG	-	chr5_4:8987503-8987522	None:intergenic	55.0%
!	TGGATTCGCTCCACTGGCTG+TGG	+	chr5_4:8984864-8984883	Msa0835580:CDS	60.0%
!	GGATTCGCTCCACTGGCTGT+GGG	+	chr5_4:8984865-8984884	Msa0835580:CDS	60.0%
	GGGTGGGGACATGGATTCAG+TGG	+	chr5_4:8984885-8984904	Msa0835580:CDS	60.0%
	AGATATGGCGGTTCCGGTGG+TGG	+	chr5_4:8985047-8985066	Msa0835580:CDS	60.0%
	TCGAACCTGAGACCTTGCGG+AGG	+	chr5_4:8985388-8985407	Msa0835580:intron	60.0%
	TAGAGGGGGATCGGATGGGT+TGG	-	chr5_4:8985449-8985468	None:intergenic	60.0%
	GTCGTTAGAGGGGGATCGGA+TGG	-	chr5_4:8985454-8985473	None:intergenic	60.0%
	CACCCACCATGAGCGGTACA+CGG	+	chr5_4:8987497-8987516	Msa0835580:three_prime_UTR	60.0%
!	TTCGCTCCACTGGCTGTGGG+TGG	+	chr5_4:8984868-8984887	Msa0835580:CDS	65.0%
!	TCGCTCCACTGGCTGTGGGT+GGG	+	chr5_4:8984869-8984888	Msa0835580:CDS	65.0%
	ATGTCCCCACCCACAGCCAG+TGG	-	chr5_4:8984877-8984896	None:intergenic	65.0%
	ACTGGCTGTGGGTGGGGACA+TGG	+	chr5_4:8984876-8984895	Msa0835580:CDS	65.0%
!	GGCGGTTCCGGTGGTGGTTT+CGG	+	chr5_4:8985053-8985072	Msa0835580:CDS	65.0%
	GTGCTCCTCCGCAAGGTCTC+AGG	-	chr5_4:8985396-8985415	None:intergenic	65.0%
!	TGGGAGTGTGCTCCTCCGCA+AGG	-	chr5_4:8985403-8985422	None:intergenic	65.0%
!!	GATCGGATGGGTTGGCCTGG+TGG	-	chr5_4:8985441-8985460	None:intergenic	65.0%
!	CGCTCCACTGGCTGTGGGTG+GGG	+	chr5_4:8984870-8984889	Msa0835580:CDS	70.0%
!!	GGGGATCGGATGGGTTGGCC+TGG	-	chr5_4:8985444-8985463	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	8983543	8987883	8983543	ID=Msa0835580;Name=Msa0835580
chr5_4	mRNA	8983543	8987883	8983543	ID=Msa0835580-mRNA-1;Parent=Msa0835580;Name=Msa0835580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=244\|1\|1\|1\|1\|1\|3\|979\|305
chr5_4	exon	8983543	8984154	8983543	ID=Msa0835580-mRNA-1:exon:3898;Parent=Msa0835580-mRNA-1
chr5_4	exon	8984768	8985214	8984768	ID=Msa0835580-mRNA-1:exon:3899;Parent=Msa0835580-mRNA-1
chr5_4	exon	8986802	8987883	8986802	ID=Msa0835580-mRNA-1:exon:3900;Parent=Msa0835580-mRNA-1
chr5_4	five_prime_UTR	8983543	8983786	8983543	ID=Msa0835580-mRNA-1:five_prime_utr;Parent=Msa0835580-mRNA-1
chr5_4	CDS	8983787	8984154	8983787	ID=Msa0835580-mRNA-1:cds;Parent=Msa0835580-mRNA-1
chr5_4	CDS	8984768	8985214	8984768	ID=Msa0835580-mRNA-1:cds;Parent=Msa0835580-mRNA-1
chr5_4	CDS	8986802	8986904	8986802	ID=Msa0835580-mRNA-1:cds;Parent=Msa0835580-mRNA-1
chr5_4	three_prime_UTR	8986905	8987883	8986905	ID=Msa0835580-mRNA-1:three_prime_utr;Parent=Msa0835580-mRNA-1

Gene Sequence

>Msa0835580

ATGGGAATAGTGGAAGACGCTCACAACGTGAAAGTTTTAGGAACAGGAAATAGGTACATAGTTCTAGCTCATGGATTTGGAACAGACCAATCTGTGTGGAAACACTTTGTACCTTATCTTGTTGATGATTTTCGTGTTGTTCTATATGATAACATGGGTGCTGGTACCACTAACCCTGAATATTTTGATTCTGAGAGACATTCAAGCTTAGAAGGTTATGCTTATGATTTACTTGCTATTTTGGAAGAGCTTCAAATTGAATCTTGCGTATTTGTTGGTCATTCTGTTTCTGCAATGATTGGTGCTATTGCTTCTATTACACGGCCTGATCTTTTCCTTAAACTTGTCATGGTTTCCGGTTCACCAAGGTATTTGAACGATGTGAATTACTTTGGAGGATTTGAGCAAGAAGATTTGAACCAATTATTCAACGCTATGGCTGAAAATTACAAAGCTTGGTGTTATGGATTCGCTCCACTGGCTGTGGGTGGGGACATGGATTCAGTGGCAGTACAGGAGTTTAGTCGAACATTGTTCAACATGAGGCCAGACATAGCTCTAATAGTGTCACGGACAATTTTTCAAAGTGACATGAGACAAATTTTGAACCTTGTTACTGTGCCTTGTCATATTATACAAGCTGAGAAAGATATGGCGGTTCCGGTGGTGGTTTCGGAGTATCTTCACCAACACTTGGGTGGTCAGTCCATTGTTGAGGTCATGACGACAGATGGTCATTTGCCGCAGTTAAGCTCACCAGATATTGTTATTCCGGTGTTGCTTAGACACATTCAACTTAATATTGAGCCCACGAGCTGCCAGAGAAACTACCACACTTTCCAAAATCCAGAGGCTTCATCAACAAAAACAACAAATACAGAGGCTTCATCCTTGATGAAAATGGAAGCAGATTTGTAA

Protein sequence

>Msa0835580

MGIVEDAHNVKVLGTGNRYIVLAHGFGTDQSVWKHFVPYLVDDFRVVLYDNMGAGTTNPEYFDSERHSSLEGYAYDLLAILEELQIESCVFVGHSVSAMIGAIASITRPDLFLKLVMVSGSPRYLNDVNYFGGFEQEDLNQLFNAMAENYKAWCYGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALIVSRTIFQSDMRQILNLVTVPCHIIQAEKDMAVPVVVSEYLHQHLGGQSIVEVMTTDGHLPQLSSPDIVIPVLLRHIQLNIEPTSCQRNYHTFQNPEASSTKTTNTEASSLMKMEADL*