Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0866100 | XP_003618119.1 | 95.538 | 381 | 10 | 4 | 3 | 380 | 2 | 378 | 0.0 | 725 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0866100 | sp|Q8L7R2|KHSE_ARATH | 70.620 | 371 | 99 | 4 | 9 | 377 | 6 | 368 | 6.92e-163 | 464 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0866100 | G7KFG1 | 95.538 | 381 | 10 | 4 | 3 | 380 | 2 | 378 | 0.0 | 725 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0866010 | Msa0866100 | 0.969570 | 2.564030e-130 | -8.615850e-47 |
Msa0866100 | Msa1367630 | 0.966526 | 4.869869e-126 | -8.615850e-47 |
Msa0866100 | Msa1399240 | 0.959423 | 2.000706e-117 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0866100 | MtrunA17_Chr5g0448691 | 95.538 | 381 | 10 | 4 | 3 | 380 | 2 | 378 | 0.0 | 725 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0866100 | AT2G17265.1 | 70.620 | 371 | 99 | 4 | 9 | 377 | 6 | 368 | 7.03e-164 | 464 |
Msa0866100 | AT4G35295.1 | 55.556 | 63 | 23 | 1 | 315 | 377 | 54 | 111 | 1.62e-12 | 63.9 |
Find 110 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAGTTGGGGCTTCAAATTC+TGG | 0.168994 | 5_4:-67515613 | None:intergenic |
AAATCAGAAGAGAAGGTTTC+TGG | 0.179307 | 5_4:+67515463 | Msa0866100:CDS |
TCTTGTGGCGTCAGTGTTAC+AGG | 0.194081 | 5_4:+67515708 | Msa0866100:CDS |
GCCATTCAAGCTGGAGCTTT+TGG | 0.204037 | 5_4:+67515829 | Msa0866100:CDS |
TTACCTTTGGGGAGTGGTTT+GGG | 0.213204 | 5_4:+67515346 | Msa0866100:CDS |
ATATCCATCTCACATATTTC+TGG | 0.261329 | 5_4:+67515196 | Msa0866100:CDS |
ATCTCACCGGGGTGAACATC+TGG | 0.273214 | 5_4:-67515175 | None:intergenic |
TTTACCTTTGGGGAGTGGTT+TGG | 0.276263 | 5_4:+67515345 | Msa0866100:CDS |
CTCGAAAAGGGTTTACCTTT+GGG | 0.276648 | 5_4:+67515334 | Msa0866100:CDS |
CCTGCCACCGTCGCCAATCT+AGG | 0.297972 | 5_4:+67515085 | Msa0866100:CDS |
TGCGGCAGCGCTGGCAGCAC+TGG | 0.307815 | 5_4:-67515371 | None:intergenic |
TTACTGAGTTTGTGGATGTT+AGG | 0.331672 | 5_4:-67515226 | None:intergenic |
CTTAGGTTCAACAATCTTAT+CGG | 0.352515 | 5_4:-67515764 | None:intergenic |
TCTCGAAAAGGGTTTACCTT+TGG | 0.361621 | 5_4:+67515333 | Msa0866100:CDS |
GCAGCACTGCCTTTAGAGAT+AGG | 0.366224 | 5_4:+67515646 | Msa0866100:CDS |
TCTTTCACTTTCTCTCGAAA+AGG | 0.371475 | 5_4:+67515321 | Msa0866100:CDS |
TAGGGATGCCGCACCATGTC+TGG | 0.375083 | 5_4:+67515665 | Msa0866100:CDS |
AAGCGTGCACCATTGATTCC+TGG | 0.387995 | 5_4:+67515784 | Msa0866100:CDS |
AACCGCGGCTGCGGCAGCGC+TGG | 0.390194 | 5_4:-67515380 | None:intergenic |
GATTCGCAATTACCAACCTT+TGG | 0.392630 | 5_4:+67515534 | Msa0866100:CDS |
GGCTGCACCATCAGTGGTGC+TGG | 0.412382 | 5_4:+67515850 | Msa0866100:CDS |
CCTAGATTGGCGACGGTGGC+AGG | 0.418200 | 5_4:-67515085 | None:intergenic |
ATCGAAGCCGGGACCTAGAT+TGG | 0.418554 | 5_4:-67515098 | None:intergenic |
TTGCTGTCAATGAGATCTTC+GGG | 0.419028 | 5_4:+67515401 | Msa0866100:CDS |
CTTTCACTTTCTCTCGAAAA+GGG | 0.421777 | 5_4:+67515322 | Msa0866100:CDS |
TGCCAGCGCTGCCGCAGCCG+CGG | 0.427734 | 5_4:+67515378 | Msa0866100:CDS |
GTTGCTGTCAATGAGATCTT+CGG | 0.437235 | 5_4:+67515400 | Msa0866100:CDS |
ACGCCACAAGAGCAGCTGCC+TGG | 0.444695 | 5_4:-67515696 | None:intergenic |
TCCTACTGCGGTTGCTGTCA+CGG | 0.459444 | 5_4:+67515873 | Msa0866100:CDS |
GGAATCAATGGTGCACGCTT+AGG | 0.462471 | 5_4:-67515781 | None:intergenic |
GCCAAAAGCTCCAGCTTGAA+TGG | 0.464692 | 5_4:-67515830 | None:intergenic |
GGTCCCGGCTTCGATTTCCT+TGG | 0.466367 | 5_4:+67515106 | Msa0866100:CDS |
GGCAGGAGCAAAGGCCTTGA+CGG | 0.467231 | 5_4:-67515068 | None:intergenic |
GCAGCCAAGGAAATCGAAGC+CGG | 0.468475 | 5_4:-67515110 | None:intergenic |
ATTGACAGCAACCGCGGCTG+CGG | 0.479575 | 5_4:-67515389 | None:intergenic |
CAATGTTGCCCCATCCATCA+TGG | 0.480430 | 5_4:+67515498 | Msa0866100:CDS |
AACATCTGGGTCCACTTTGA+CGG | 0.481780 | 5_4:-67515161 | None:intergenic |
CTTGTGGCGTCAGTGTTACA+GGG | 0.482574 | 5_4:+67515709 | Msa0866100:CDS |
CATGTTGTTGAAGCAGCCAT+TGG | 0.487615 | 5_4:-67514890 | None:intergenic |
CTTCTCTTCTGATTTCAAGC+AGG | 0.492990 | 5_4:-67515455 | None:intergenic |
CAACAATCTTATCGGAGGAC+AGG | 0.494191 | 5_4:-67515756 | None:intergenic |
AAGAAGGCTGCCATTCAAGC+TGG | 0.496033 | 5_4:+67515820 | Msa0866100:CDS |
TGTTTGAAATTAAAGGAAAG+TGG | 0.496328 | 5_4:-67514935 | None:intergenic |
CCATGTCTGGAATTCTAGCC+AGG | 0.497827 | 5_4:+67515678 | Msa0866100:CDS |
AGCGTGCACCATTGATTCCT+GGG | 0.501591 | 5_4:+67515785 | Msa0866100:CDS |
AAGGGTTTACCTTTGGGGAG+TGG | 0.504469 | 5_4:+67515340 | Msa0866100:CDS |
TGTCACGGATAACGAGGAAA+AGG | 0.505606 | 5_4:+67515888 | Msa0866100:CDS |
GCATCCATCCCAGGAATCAA+TGG | 0.507028 | 5_4:-67515793 | None:intergenic |
TGCCATCGACAGCGCAGCCA+AGG | 0.508599 | 5_4:-67515123 | None:intergenic |
ACCTGTTTATTCTTCCGTCA+AGG | 0.511408 | 5_4:+67515054 | Msa0866100:CDS |
GTCAAGCAGCTTGATCGCCT+TGG | 0.519083 | 5_4:+67515979 | Msa0866100:CDS |
GGCTGCGCTGTCGATGGCAT+CGG | 0.519529 | 5_4:+67515127 | Msa0866100:CDS |
TCGAAAAGGGTTTACCTTTG+GGG | 0.519846 | 5_4:+67515335 | Msa0866100:CDS |
ACGGAAGAATAAACAGGTGG+TGG | 0.522057 | 5_4:-67515049 | None:intergenic |
GTCACGGATAACGAGGAAAA+GGG | 0.522822 | 5_4:+67515889 | Msa0866100:CDS |
ACCGTCGCCAATCTAGGTCC+CGG | 0.523818 | 5_4:+67515091 | Msa0866100:CDS |
ACGGCATCAATTCCAAAGGT+TGG | 0.527087 | 5_4:-67515546 | None:intergenic |
AATGTTGCCCCATCCATCAT+GGG | 0.527769 | 5_4:+67515499 | Msa0866100:CDS |
GGCGACGGTGGCAGGAGCAA+AGG | 0.532400 | 5_4:-67515077 | None:intergenic |
TAGCCAGGCAGCTGCTCTTG+TGG | 0.536109 | 5_4:+67515693 | Msa0866100:CDS |
AACCCTCTTTGGAACTGCGC+TGG | 0.536246 | 5_4:+67515250 | Msa0866100:CDS |
CAGCACTGCCTTTAGAGATA+GGG | 0.537569 | 5_4:+67515647 | Msa0866100:CDS |
GCGATCAAGCTGCTTGACAT+TGG | 0.539004 | 5_4:-67515974 | None:intergenic |
CAGCCAAGGAAATCGAAGCC+GGG | 0.542736 | 5_4:-67515109 | None:intergenic |
TTCTTGACAGCATCCATCCC+AGG | 0.549795 | 5_4:-67515802 | None:intergenic |
TGCGGCATCCCTATCTCTAA+AGG | 0.558659 | 5_4:-67515655 | None:intergenic |
TGGGATGGATGCTGTCAAGA+AGG | 0.561159 | 5_4:+67515804 | Msa0866100:CDS |
GCCTTGACGGAAGAATAAAC+AGG | 0.565015 | 5_4:-67515055 | None:intergenic |
TCTCACCGGGGTGAACATCT+GGG | 0.567871 | 5_4:-67515174 | None:intergenic |
TGCACCATTGATTCCTGGGA+TGG | 0.572503 | 5_4:+67515789 | Msa0866100:CDS |
GGATTTGTTCATGTTAGGGA+AGG | 0.572617 | 5_4:+67515732 | Msa0866100:CDS |
CTGCTTGAAATCAGAAGAGA+AGG | 0.573937 | 5_4:+67515456 | Msa0866100:CDS |
ATGTGAGATGGATATCTCAC+CGG | 0.575914 | 5_4:-67515188 | None:intergenic |
AGTAGGACCAGCACCACTGA+TGG | 0.581134 | 5_4:-67515857 | None:intergenic |
TGTGAGATGGATATCTCACC+GGG | 0.582722 | 5_4:-67515187 | None:intergenic |
TACCAGCGCAGTTCCAAAGA+GGG | 0.584554 | 5_4:-67515252 | None:intergenic |
ATTTCAAGCAGGCGAGAACA+AGG | 0.584734 | 5_4:-67515444 | None:intergenic |
TCGGTAAGTGTGACGACGGA+GGG | 0.586137 | 5_4:-67515025 | None:intergenic |
AGAATAAACAGGTGGTGGGT+CGG | 0.588466 | 5_4:-67515044 | None:intergenic |
AACAATCTTATCGGAGGACA+GGG | 0.598923 | 5_4:-67515755 | None:intergenic |
TTCAACGGCATCAATTCCAA+AGG | 0.604897 | 5_4:-67515550 | None:intergenic |
ATGCTCCGCATTCGATCCGT+CGG | 0.611634 | 5_4:+67515298 | Msa0866100:CDS |
GCCGGGACCTAGATTGGCGA+CGG | 0.611775 | 5_4:-67515092 | None:intergenic |
TTGACCAGAAATATGTGAGA+TGG | 0.612753 | 5_4:-67515200 | None:intergenic |
ATGTTGCCCCATCCATCATG+GGG | 0.617492 | 5_4:+67515500 | Msa0866100:CDS |
GTTGCCCCATCCATCATGGG+GGG | 0.619596 | 5_4:+67515502 | Msa0866100:CDS |
CTTCGGGAAAAGATTGAGTG+TGG | 0.620572 | 5_4:+67515417 | Msa0866100:CDS |
CCTGGCTAGAATTCCAGACA+TGG | 0.621126 | 5_4:-67515678 | None:intergenic |
AAAGACCGACGGATCGAATG+CGG | 0.626540 | 5_4:-67515303 | None:intergenic |
TGACACTGTCTCCGTCAAAG+TGG | 0.628597 | 5_4:+67515150 | Msa0866100:CDS |
CGGAAGAATAAACAGGTGGT+GGG | 0.638411 | 5_4:-67515048 | None:intergenic |
AGGTTCAACAATCTTATCGG+AGG | 0.639350 | 5_4:-67515761 | None:intergenic |
CTAGAATTCCAGACATGGTG+CGG | 0.639933 | 5_4:-67515673 | None:intergenic |
GATCTCATTGACAGCAACCG+CGG | 0.645517 | 5_4:-67515395 | None:intergenic |
TCCGTGACAGCAACCGCAGT+AGG | 0.650384 | 5_4:-67515874 | None:intergenic |
GATCCCAAACCACTCCCCAA+AGG | 0.653408 | 5_4:-67515349 | None:intergenic |
TTGTGGCGTCAGTGTTACAG+GGG | 0.658642 | 5_4:+67515710 | Msa0866100:CDS |
TCACGGATAACGAGGAAAAG+GGG | 0.661954 | 5_4:+67515890 | Msa0866100:CDS |
GGTTGCTGTCACGGATAACG+AGG | 0.663758 | 5_4:+67515882 | Msa0866100:CDS |
GACGGAGGGATGCTTCTGAG+AGG | 0.670246 | 5_4:-67515011 | None:intergenic |
GTCGGTAAGTGTGACGACGG+AGG | 0.671687 | 5_4:-67515026 | None:intergenic |
ATACCAGCGCAGTTCCAAAG+AGG | 0.675755 | 5_4:-67515253 | None:intergenic |
TGTGGCGTCAGTGTTACAGG+GGG | 0.680350 | 5_4:+67515711 | Msa0866100:CDS |
GAGAGAAAGTGAAAGACCGA+CGG | 0.682882 | 5_4:-67515314 | None:intergenic |
TGCTAATAAGTCTAGCACCA+AGG | 0.687849 | 5_4:-67515996 | None:intergenic |
CAGTGGTGCTGGTCCTACTG+CGG | 0.694225 | 5_4:+67515861 | Msa0866100:CDS |
TGTTGCCCCATCCATCATGG+GGG | 0.701496 | 5_4:+67515501 | Msa0866100:CDS |
TGGGTCGGTAAGTGTGACGA+CGG | 0.704433 | 5_4:-67515029 | None:intergenic |
TTGACGGAAGAATAAACAGG+TGG | 0.720068 | 5_4:-67515052 | None:intergenic |
GTGAGATGGATATCTCACCG+GGG | 0.829626 | 5_4:-67515186 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTCTTTTGTTTGAAATTAA+AGG | - | chr5_4:67514945-67514964 | None:intergenic | 15.0% |
!!! | ATTCTTTTGTTTGAAATTAA+AGG | - | chr5_4:67514945-67514964 | None:intergenic | 15.0% |
!! | TGTTTGAAATTAAAGGAAAG+TGG | - | chr5_4:67514938-67514957 | None:intergenic | 25.0% |
!!! | AATATAGCTGTTTTTCAGAT+GGG | - | chr5_4:67515579-67515598 | None:intergenic | 25.0% |
!!! | AAATATAGCTGTTTTTCAGA+TGG | - | chr5_4:67515580-67515599 | None:intergenic | 25.0% |
!! | TGTTTGAAATTAAAGGAAAG+TGG | - | chr5_4:67514938-67514957 | None:intergenic | 25.0% |
!!! | AATATAGCTGTTTTTCAGAT+GGG | - | chr5_4:67515579-67515598 | None:intergenic | 25.0% |
!!! | AAATATAGCTGTTTTTCAGA+TGG | - | chr5_4:67515580-67515599 | None:intergenic | 25.0% |
ATATCCATCTCACATATTTC+TGG | + | chr5_4:67515196-67515215 | Msa0866100:CDS | 30.0% | |
!!! | TGCTCTCATTTTTTTAGTTG+GGG | - | chr5_4:67515629-67515648 | None:intergenic | 30.0% |
!!! | CTGCTCTCATTTTTTTAGTT+GGG | - | chr5_4:67515630-67515649 | None:intergenic | 30.0% |
CTTAGGTTCAACAATCTTAT+CGG | - | chr5_4:67515767-67515786 | None:intergenic | 30.0% | |
! | CATGATTCAAGCTTTTCAAA+AGG | + | chr5_4:67515930-67515949 | Msa0866100:CDS | 30.0% |
! | ATTCAAGCTTTTCAAAAGGA+AGG | + | chr5_4:67515934-67515953 | Msa0866100:CDS | 30.0% |
ATATCCATCTCACATATTTC+TGG | + | chr5_4:67515196-67515215 | Msa0866100:CDS | 30.0% | |
!!! | TGCTCTCATTTTTTTAGTTG+GGG | - | chr5_4:67515629-67515648 | None:intergenic | 30.0% |
!!! | CTGCTCTCATTTTTTTAGTT+GGG | - | chr5_4:67515630-67515649 | None:intergenic | 30.0% |
CTTAGGTTCAACAATCTTAT+CGG | - | chr5_4:67515767-67515786 | None:intergenic | 30.0% | |
! | CATGATTCAAGCTTTTCAAA+AGG | + | chr5_4:67515930-67515949 | Msa0866100:CDS | 30.0% |
! | ATTCAAGCTTTTCAAAAGGA+AGG | + | chr5_4:67515934-67515953 | Msa0866100:CDS | 30.0% |
TTGACCAGAAATATGTGAGA+TGG | - | chr5_4:67515203-67515222 | None:intergenic | 35.0% | |
TTACTGAGTTTGTGGATGTT+AGG | - | chr5_4:67515229-67515248 | None:intergenic | 35.0% | |
AACTCAGTAAAAACCCTCTT+TGG | + | chr5_4:67515239-67515258 | Msa0866100:CDS | 35.0% | |
TCTTTCACTTTCTCTCGAAA+AGG | + | chr5_4:67515321-67515340 | Msa0866100:CDS | 35.0% | |
CTTTCACTTTCTCTCGAAAA+GGG | + | chr5_4:67515322-67515341 | Msa0866100:CDS | 35.0% | |
AAATCAGAAGAGAAGGTTTC+TGG | + | chr5_4:67515463-67515482 | Msa0866100:CDS | 35.0% | |
! | TTTTCAGATGGGAACTTCAA+CGG | - | chr5_4:67515568-67515587 | None:intergenic | 35.0% |
!!! | GCTGCTCTCATTTTTTTAGT+TGG | - | chr5_4:67515631-67515650 | None:intergenic | 35.0% |
TTGACCAGAAATATGTGAGA+TGG | - | chr5_4:67515203-67515222 | None:intergenic | 35.0% | |
TTACTGAGTTTGTGGATGTT+AGG | - | chr5_4:67515229-67515248 | None:intergenic | 35.0% | |
AACTCAGTAAAAACCCTCTT+TGG | + | chr5_4:67515239-67515258 | Msa0866100:CDS | 35.0% | |
TCTTTCACTTTCTCTCGAAA+AGG | + | chr5_4:67515321-67515340 | Msa0866100:CDS | 35.0% | |
CTTTCACTTTCTCTCGAAAA+GGG | + | chr5_4:67515322-67515341 | Msa0866100:CDS | 35.0% | |
AAATCAGAAGAGAAGGTTTC+TGG | + | chr5_4:67515463-67515482 | Msa0866100:CDS | 35.0% | |
! | TTTTCAGATGGGAACTTCAA+CGG | - | chr5_4:67515568-67515587 | None:intergenic | 35.0% |
!!! | GCTGCTCTCATTTTTTTAGT+TGG | - | chr5_4:67515631-67515650 | None:intergenic | 35.0% |
TTGACGGAAGAATAAACAGG+TGG | - | chr5_4:67515055-67515074 | None:intergenic | 40.0% | |
ACCTGTTTATTCTTCCGTCA+AGG | + | chr5_4:67515054-67515073 | Msa0866100:CDS | 40.0% | |
ATGTGAGATGGATATCTCAC+CGG | - | chr5_4:67515191-67515210 | None:intergenic | 40.0% | |
! | GAGGGTTTTTACTGAGTTTG+TGG | - | chr5_4:67515237-67515256 | None:intergenic | 40.0% |
! | CATTTTCATGGCTTCGATAG+CGG | - | chr5_4:67515281-67515300 | None:intergenic | 40.0% |
TCTCGAAAAGGGTTTACCTT+TGG | + | chr5_4:67515333-67515352 | Msa0866100:CDS | 40.0% | |
CTCGAAAAGGGTTTACCTTT+GGG | + | chr5_4:67515334-67515353 | Msa0866100:CDS | 40.0% | |
TCGAAAAGGGTTTACCTTTG+GGG | + | chr5_4:67515335-67515354 | Msa0866100:CDS | 40.0% | |
GTTGCTGTCAATGAGATCTT+CGG | + | chr5_4:67515400-67515419 | Msa0866100:CDS | 40.0% | |
TTGCTGTCAATGAGATCTTC+GGG | + | chr5_4:67515401-67515420 | Msa0866100:CDS | 40.0% | |
CTTCTCTTCTGATTTCAAGC+AGG | - | chr5_4:67515458-67515477 | None:intergenic | 40.0% | |
CTGCTTGAAATCAGAAGAGA+AGG | + | chr5_4:67515456-67515475 | Msa0866100:CDS | 40.0% | |
GATTCGCAATTACCAACCTT+TGG | + | chr5_4:67515534-67515553 | Msa0866100:CDS | 40.0% | |
TTCAACGGCATCAATTCCAA+AGG | - | chr5_4:67515553-67515572 | None:intergenic | 40.0% | |
TTAGTTGGGGCTTCAAATTC+TGG | - | chr5_4:67515616-67515635 | None:intergenic | 40.0% | |
! | AGGGGGATTTGTTCATGTTA+GGG | + | chr5_4:67515728-67515747 | Msa0866100:CDS | 40.0% |
! | GGATTTGTTCATGTTAGGGA+AGG | + | chr5_4:67515732-67515751 | Msa0866100:CDS | 40.0% |
AACAATCTTATCGGAGGACA+GGG | - | chr5_4:67515758-67515777 | None:intergenic | 40.0% | |
AGGTTCAACAATCTTATCGG+AGG | - | chr5_4:67515764-67515783 | None:intergenic | 40.0% | |
TGCTAATAAGTCTAGCACCA+AGG | - | chr5_4:67515999-67516018 | None:intergenic | 40.0% | |
TTGACGGAAGAATAAACAGG+TGG | - | chr5_4:67515055-67515074 | None:intergenic | 40.0% | |
ACCTGTTTATTCTTCCGTCA+AGG | + | chr5_4:67515054-67515073 | Msa0866100:CDS | 40.0% | |
ATGTGAGATGGATATCTCAC+CGG | - | chr5_4:67515191-67515210 | None:intergenic | 40.0% | |
! | GAGGGTTTTTACTGAGTTTG+TGG | - | chr5_4:67515237-67515256 | None:intergenic | 40.0% |
! | CATTTTCATGGCTTCGATAG+CGG | - | chr5_4:67515281-67515300 | None:intergenic | 40.0% |
TCTCGAAAAGGGTTTACCTT+TGG | + | chr5_4:67515333-67515352 | Msa0866100:CDS | 40.0% | |
CTCGAAAAGGGTTTACCTTT+GGG | + | chr5_4:67515334-67515353 | Msa0866100:CDS | 40.0% | |
TCGAAAAGGGTTTACCTTTG+GGG | + | chr5_4:67515335-67515354 | Msa0866100:CDS | 40.0% | |
GTTGCTGTCAATGAGATCTT+CGG | + | chr5_4:67515400-67515419 | Msa0866100:CDS | 40.0% | |
TTGCTGTCAATGAGATCTTC+GGG | + | chr5_4:67515401-67515420 | Msa0866100:CDS | 40.0% | |
CTTCTCTTCTGATTTCAAGC+AGG | - | chr5_4:67515458-67515477 | None:intergenic | 40.0% | |
CTGCTTGAAATCAGAAGAGA+AGG | + | chr5_4:67515456-67515475 | Msa0866100:CDS | 40.0% | |
GATTCGCAATTACCAACCTT+TGG | + | chr5_4:67515534-67515553 | Msa0866100:CDS | 40.0% | |
TTCAACGGCATCAATTCCAA+AGG | - | chr5_4:67515553-67515572 | None:intergenic | 40.0% | |
TTAGTTGGGGCTTCAAATTC+TGG | - | chr5_4:67515616-67515635 | None:intergenic | 40.0% | |
! | AGGGGGATTTGTTCATGTTA+GGG | + | chr5_4:67515728-67515747 | Msa0866100:CDS | 40.0% |
! | GGATTTGTTCATGTTAGGGA+AGG | + | chr5_4:67515732-67515751 | Msa0866100:CDS | 40.0% |
AACAATCTTATCGGAGGACA+GGG | - | chr5_4:67515758-67515777 | None:intergenic | 40.0% | |
AGGTTCAACAATCTTATCGG+AGG | - | chr5_4:67515764-67515783 | None:intergenic | 40.0% | |
TGCTAATAAGTCTAGCACCA+AGG | - | chr5_4:67515999-67516018 | None:intergenic | 40.0% | |
!! | AGAATAAACAGGTGGTGGGT+CGG | - | chr5_4:67515047-67515066 | None:intergenic | 45.0% |
CGGAAGAATAAACAGGTGGT+GGG | - | chr5_4:67515051-67515070 | None:intergenic | 45.0% | |
ACGGAAGAATAAACAGGTGG+TGG | - | chr5_4:67515052-67515071 | None:intergenic | 45.0% | |
GCCTTGACGGAAGAATAAAC+AGG | - | chr5_4:67515058-67515077 | None:intergenic | 45.0% | |
AACATCTGGGTCCACTTTGA+CGG | - | chr5_4:67515164-67515183 | None:intergenic | 45.0% | |
TGTGAGATGGATATCTCACC+GGG | - | chr5_4:67515190-67515209 | None:intergenic | 45.0% | |
!! | TCGAATGCGGAGCATTTTCA+TGG | - | chr5_4:67515293-67515312 | None:intergenic | 45.0% |
GAGAGAAAGTGAAAGACCGA+CGG | - | chr5_4:67515317-67515336 | None:intergenic | 45.0% | |
! | TTTACCTTTGGGGAGTGGTT+TGG | + | chr5_4:67515345-67515364 | Msa0866100:CDS | 45.0% |
! | TTACCTTTGGGGAGTGGTTT+GGG | + | chr5_4:67515346-67515365 | Msa0866100:CDS | 45.0% |
CTTCGGGAAAAGATTGAGTG+TGG | + | chr5_4:67515417-67515436 | Msa0866100:CDS | 45.0% | |
ATTTCAAGCAGGCGAGAACA+AGG | - | chr5_4:67515447-67515466 | None:intergenic | 45.0% | |
AATGTTGCCCCATCCATCAT+GGG | + | chr5_4:67515499-67515518 | Msa0866100:CDS | 45.0% | |
ACGGCATCAATTCCAAAGGT+TGG | - | chr5_4:67515549-67515568 | None:intergenic | 45.0% | |
! | CAGCACTGCCTTTAGAGATA+GGG | + | chr5_4:67515647-67515666 | Msa0866100:CDS | 45.0% |
CTAGAATTCCAGACATGGTG+CGG | - | chr5_4:67515676-67515695 | None:intergenic | 45.0% | |
! | CAGGGGGATTTGTTCATGTT+AGG | + | chr5_4:67515727-67515746 | Msa0866100:CDS | 45.0% |
CAACAATCTTATCGGAGGAC+AGG | - | chr5_4:67515759-67515778 | None:intergenic | 45.0% | |
TGTCACGGATAACGAGGAAA+AGG | + | chr5_4:67515888-67515907 | Msa0866100:CDS | 45.0% | |
GTCACGGATAACGAGGAAAA+GGG | + | chr5_4:67515889-67515908 | Msa0866100:CDS | 45.0% | |
TCACGGATAACGAGGAAAAG+GGG | + | chr5_4:67515890-67515909 | Msa0866100:CDS | 45.0% | |
!! | AGAATAAACAGGTGGTGGGT+CGG | - | chr5_4:67515047-67515066 | None:intergenic | 45.0% |
CGGAAGAATAAACAGGTGGT+GGG | - | chr5_4:67515051-67515070 | None:intergenic | 45.0% | |
ACGGAAGAATAAACAGGTGG+TGG | - | chr5_4:67515052-67515071 | None:intergenic | 45.0% | |
GCCTTGACGGAAGAATAAAC+AGG | - | chr5_4:67515058-67515077 | None:intergenic | 45.0% | |
AACATCTGGGTCCACTTTGA+CGG | - | chr5_4:67515164-67515183 | None:intergenic | 45.0% | |
TGTGAGATGGATATCTCACC+GGG | - | chr5_4:67515190-67515209 | None:intergenic | 45.0% | |
!! | TCGAATGCGGAGCATTTTCA+TGG | - | chr5_4:67515293-67515312 | None:intergenic | 45.0% |
GAGAGAAAGTGAAAGACCGA+CGG | - | chr5_4:67515317-67515336 | None:intergenic | 45.0% | |
! | TTTACCTTTGGGGAGTGGTT+TGG | + | chr5_4:67515345-67515364 | Msa0866100:CDS | 45.0% |
! | TTACCTTTGGGGAGTGGTTT+GGG | + | chr5_4:67515346-67515365 | Msa0866100:CDS | 45.0% |
CTTCGGGAAAAGATTGAGTG+TGG | + | chr5_4:67515417-67515436 | Msa0866100:CDS | 45.0% | |
ATTTCAAGCAGGCGAGAACA+AGG | - | chr5_4:67515447-67515466 | None:intergenic | 45.0% | |
AATGTTGCCCCATCCATCAT+GGG | + | chr5_4:67515499-67515518 | Msa0866100:CDS | 45.0% | |
ACGGCATCAATTCCAAAGGT+TGG | - | chr5_4:67515549-67515568 | None:intergenic | 45.0% | |
! | CAGCACTGCCTTTAGAGATA+GGG | + | chr5_4:67515647-67515666 | Msa0866100:CDS | 45.0% |
CTAGAATTCCAGACATGGTG+CGG | - | chr5_4:67515676-67515695 | None:intergenic | 45.0% | |
! | CAGGGGGATTTGTTCATGTT+AGG | + | chr5_4:67515727-67515746 | Msa0866100:CDS | 45.0% |
CAACAATCTTATCGGAGGAC+AGG | - | chr5_4:67515759-67515778 | None:intergenic | 45.0% | |
TGTCACGGATAACGAGGAAA+AGG | + | chr5_4:67515888-67515907 | Msa0866100:CDS | 45.0% | |
GTCACGGATAACGAGGAAAA+GGG | + | chr5_4:67515889-67515908 | Msa0866100:CDS | 45.0% | |
TCACGGATAACGAGGAAAAG+GGG | + | chr5_4:67515890-67515909 | Msa0866100:CDS | 45.0% | |
TGACACTGTCTCCGTCAAAG+TGG | + | chr5_4:67515150-67515169 | Msa0866100:CDS | 50.0% | |
GTGAGATGGATATCTCACCG+GGG | - | chr5_4:67515189-67515208 | None:intergenic | 50.0% | |
TACCAGCGCAGTTCCAAAGA+GGG | - | chr5_4:67515255-67515274 | None:intergenic | 50.0% | |
ATACCAGCGCAGTTCCAAAG+AGG | - | chr5_4:67515256-67515275 | None:intergenic | 50.0% | |
AAAGACCGACGGATCGAATG+CGG | - | chr5_4:67515306-67515325 | None:intergenic | 50.0% | |
! | AAGGGTTTACCTTTGGGGAG+TGG | + | chr5_4:67515340-67515359 | Msa0866100:CDS | 50.0% |
GATCTCATTGACAGCAACCG+CGG | - | chr5_4:67515398-67515417 | None:intergenic | 50.0% | |
CAATGTTGCCCCATCCATCA+TGG | + | chr5_4:67515498-67515517 | Msa0866100:CDS | 50.0% | |
ATGTTGCCCCATCCATCATG+GGG | + | chr5_4:67515500-67515519 | Msa0866100:CDS | 50.0% | |
!! | AAAACCCCCCATGATGGATG+GGG | - | chr5_4:67515509-67515528 | None:intergenic | 50.0% |
!! | CAAAACCCCCCATGATGGAT+GGG | - | chr5_4:67515510-67515529 | None:intergenic | 50.0% |
! | ACAAAACCCCCCATGATGGA+TGG | - | chr5_4:67515511-67515530 | None:intergenic | 50.0% |
CAACACAAAACCCCCCATGA+TGG | - | chr5_4:67515515-67515534 | None:intergenic | 50.0% | |
! | GCAGCACTGCCTTTAGAGAT+AGG | + | chr5_4:67515646-67515665 | Msa0866100:CDS | 50.0% |
TGCGGCATCCCTATCTCTAA+AGG | - | chr5_4:67515658-67515677 | None:intergenic | 50.0% | |
CCTGGCTAGAATTCCAGACA+TGG | - | chr5_4:67515681-67515700 | None:intergenic | 50.0% | |
! | CCATGTCTGGAATTCTAGCC+AGG | + | chr5_4:67515678-67515697 | Msa0866100:CDS | 50.0% |
TCTTGTGGCGTCAGTGTTAC+AGG | + | chr5_4:67515708-67515727 | Msa0866100:CDS | 50.0% | |
CTTGTGGCGTCAGTGTTACA+GGG | + | chr5_4:67515709-67515728 | Msa0866100:CDS | 50.0% | |
TTGTGGCGTCAGTGTTACAG+GGG | + | chr5_4:67515710-67515729 | Msa0866100:CDS | 50.0% | |
GGAATCAATGGTGCACGCTT+AGG | - | chr5_4:67515784-67515803 | None:intergenic | 50.0% | |
!! | AAGCGTGCACCATTGATTCC+TGG | + | chr5_4:67515784-67515803 | Msa0866100:CDS | 50.0% |
!! | AGCGTGCACCATTGATTCCT+GGG | + | chr5_4:67515785-67515804 | Msa0866100:CDS | 50.0% |
!! | TGCACCATTGATTCCTGGGA+TGG | + | chr5_4:67515789-67515808 | Msa0866100:CDS | 50.0% |
GCATCCATCCCAGGAATCAA+TGG | - | chr5_4:67515796-67515815 | None:intergenic | 50.0% | |
TTCTTGACAGCATCCATCCC+AGG | - | chr5_4:67515805-67515824 | None:intergenic | 50.0% | |
TGGGATGGATGCTGTCAAGA+AGG | + | chr5_4:67515804-67515823 | Msa0866100:CDS | 50.0% | |
AAGAAGGCTGCCATTCAAGC+TGG | + | chr5_4:67515820-67515839 | Msa0866100:CDS | 50.0% | |
! | GCCATTCAAGCTGGAGCTTT+TGG | + | chr5_4:67515829-67515848 | Msa0866100:CDS | 50.0% |
GCCAAAAGCTCCAGCTTGAA+TGG | - | chr5_4:67515833-67515852 | None:intergenic | 50.0% | |
GCGATCAAGCTGCTTGACAT+TGG | - | chr5_4:67515977-67515996 | None:intergenic | 50.0% | |
TGACACTGTCTCCGTCAAAG+TGG | + | chr5_4:67515150-67515169 | Msa0866100:CDS | 50.0% | |
GTGAGATGGATATCTCACCG+GGG | - | chr5_4:67515189-67515208 | None:intergenic | 50.0% | |
TACCAGCGCAGTTCCAAAGA+GGG | - | chr5_4:67515255-67515274 | None:intergenic | 50.0% | |
ATACCAGCGCAGTTCCAAAG+AGG | - | chr5_4:67515256-67515275 | None:intergenic | 50.0% | |
AAAGACCGACGGATCGAATG+CGG | - | chr5_4:67515306-67515325 | None:intergenic | 50.0% | |
! | AAGGGTTTACCTTTGGGGAG+TGG | + | chr5_4:67515340-67515359 | Msa0866100:CDS | 50.0% |
GATCTCATTGACAGCAACCG+CGG | - | chr5_4:67515398-67515417 | None:intergenic | 50.0% | |
CAATGTTGCCCCATCCATCA+TGG | + | chr5_4:67515498-67515517 | Msa0866100:CDS | 50.0% | |
ATGTTGCCCCATCCATCATG+GGG | + | chr5_4:67515500-67515519 | Msa0866100:CDS | 50.0% | |
!! | AAAACCCCCCATGATGGATG+GGG | - | chr5_4:67515509-67515528 | None:intergenic | 50.0% |
!! | CAAAACCCCCCATGATGGAT+GGG | - | chr5_4:67515510-67515529 | None:intergenic | 50.0% |
! | ACAAAACCCCCCATGATGGA+TGG | - | chr5_4:67515511-67515530 | None:intergenic | 50.0% |
CAACACAAAACCCCCCATGA+TGG | - | chr5_4:67515515-67515534 | None:intergenic | 50.0% | |
! | GCAGCACTGCCTTTAGAGAT+AGG | + | chr5_4:67515646-67515665 | Msa0866100:CDS | 50.0% |
TGCGGCATCCCTATCTCTAA+AGG | - | chr5_4:67515658-67515677 | None:intergenic | 50.0% | |
CCTGGCTAGAATTCCAGACA+TGG | - | chr5_4:67515681-67515700 | None:intergenic | 50.0% | |
! | CCATGTCTGGAATTCTAGCC+AGG | + | chr5_4:67515678-67515697 | Msa0866100:CDS | 50.0% |
TCTTGTGGCGTCAGTGTTAC+AGG | + | chr5_4:67515708-67515727 | Msa0866100:CDS | 50.0% | |
CTTGTGGCGTCAGTGTTACA+GGG | + | chr5_4:67515709-67515728 | Msa0866100:CDS | 50.0% | |
TTGTGGCGTCAGTGTTACAG+GGG | + | chr5_4:67515710-67515729 | Msa0866100:CDS | 50.0% | |
GGAATCAATGGTGCACGCTT+AGG | - | chr5_4:67515784-67515803 | None:intergenic | 50.0% | |
!! | AAGCGTGCACCATTGATTCC+TGG | + | chr5_4:67515784-67515803 | Msa0866100:CDS | 50.0% |
!! | AGCGTGCACCATTGATTCCT+GGG | + | chr5_4:67515785-67515804 | Msa0866100:CDS | 50.0% |
!! | TGCACCATTGATTCCTGGGA+TGG | + | chr5_4:67515789-67515808 | Msa0866100:CDS | 50.0% |
GCATCCATCCCAGGAATCAA+TGG | - | chr5_4:67515796-67515815 | None:intergenic | 50.0% | |
TTCTTGACAGCATCCATCCC+AGG | - | chr5_4:67515805-67515824 | None:intergenic | 50.0% | |
TGGGATGGATGCTGTCAAGA+AGG | + | chr5_4:67515804-67515823 | Msa0866100:CDS | 50.0% | |
AAGAAGGCTGCCATTCAAGC+TGG | + | chr5_4:67515820-67515839 | Msa0866100:CDS | 50.0% | |
! | GCCATTCAAGCTGGAGCTTT+TGG | + | chr5_4:67515829-67515848 | Msa0866100:CDS | 50.0% |
GCCAAAAGCTCCAGCTTGAA+TGG | - | chr5_4:67515833-67515852 | None:intergenic | 50.0% | |
GCGATCAAGCTGCTTGACAT+TGG | - | chr5_4:67515977-67515996 | None:intergenic | 50.0% | |
TCGGTAAGTGTGACGACGGA+GGG | - | chr5_4:67515028-67515047 | None:intergenic | 55.0% | |
TGGGTCGGTAAGTGTGACGA+CGG | - | chr5_4:67515032-67515051 | None:intergenic | 55.0% | |
ATCGAAGCCGGGACCTAGAT+TGG | - | chr5_4:67515101-67515120 | None:intergenic | 55.0% | |
CAGCCAAGGAAATCGAAGCC+GGG | - | chr5_4:67515112-67515131 | None:intergenic | 55.0% | |
GCAGCCAAGGAAATCGAAGC+CGG | - | chr5_4:67515113-67515132 | None:intergenic | 55.0% | |
TCTCACCGGGGTGAACATCT+GGG | - | chr5_4:67515177-67515196 | None:intergenic | 55.0% | |
ATCTCACCGGGGTGAACATC+TGG | - | chr5_4:67515178-67515197 | None:intergenic | 55.0% | |
!! | AACCCTCTTTGGAACTGCGC+TGG | + | chr5_4:67515250-67515269 | Msa0866100:CDS | 55.0% |
ATGCTCCGCATTCGATCCGT+CGG | + | chr5_4:67515298-67515317 | Msa0866100:CDS | 55.0% | |
GATCCCAAACCACTCCCCAA+AGG | - | chr5_4:67515352-67515371 | None:intergenic | 55.0% | |
TGTTGCCCCATCCATCATGG+GGG | + | chr5_4:67515501-67515520 | Msa0866100:CDS | 55.0% | |
TGTGGCGTCAGTGTTACAGG+GGG | + | chr5_4:67515711-67515730 | Msa0866100:CDS | 55.0% | |
!! | GCTTTTGGCTGCACCATCAG+TGG | + | chr5_4:67515844-67515863 | Msa0866100:CDS | 55.0% |
AGTAGGACCAGCACCACTGA+TGG | - | chr5_4:67515860-67515879 | None:intergenic | 55.0% | |
TCCTACTGCGGTTGCTGTCA+CGG | + | chr5_4:67515873-67515892 | Msa0866100:CDS | 55.0% | |
GGTTGCTGTCACGGATAACG+AGG | + | chr5_4:67515882-67515901 | Msa0866100:CDS | 55.0% | |
GTCAAGCAGCTTGATCGCCT+TGG | + | chr5_4:67515979-67515998 | Msa0866100:CDS | 55.0% | |
TCGGTAAGTGTGACGACGGA+GGG | - | chr5_4:67515028-67515047 | None:intergenic | 55.0% | |
TGGGTCGGTAAGTGTGACGA+CGG | - | chr5_4:67515032-67515051 | None:intergenic | 55.0% | |
ATCGAAGCCGGGACCTAGAT+TGG | - | chr5_4:67515101-67515120 | None:intergenic | 55.0% | |
CAGCCAAGGAAATCGAAGCC+GGG | - | chr5_4:67515112-67515131 | None:intergenic | 55.0% | |
GCAGCCAAGGAAATCGAAGC+CGG | - | chr5_4:67515113-67515132 | None:intergenic | 55.0% | |
TCTCACCGGGGTGAACATCT+GGG | - | chr5_4:67515177-67515196 | None:intergenic | 55.0% | |
ATCTCACCGGGGTGAACATC+TGG | - | chr5_4:67515178-67515197 | None:intergenic | 55.0% | |
!! | AACCCTCTTTGGAACTGCGC+TGG | + | chr5_4:67515250-67515269 | Msa0866100:CDS | 55.0% |
ATGCTCCGCATTCGATCCGT+CGG | + | chr5_4:67515298-67515317 | Msa0866100:CDS | 55.0% | |
GATCCCAAACCACTCCCCAA+AGG | - | chr5_4:67515352-67515371 | None:intergenic | 55.0% | |
TGTTGCCCCATCCATCATGG+GGG | + | chr5_4:67515501-67515520 | Msa0866100:CDS | 55.0% | |
TGTGGCGTCAGTGTTACAGG+GGG | + | chr5_4:67515711-67515730 | Msa0866100:CDS | 55.0% | |
!! | GCTTTTGGCTGCACCATCAG+TGG | + | chr5_4:67515844-67515863 | Msa0866100:CDS | 55.0% |
AGTAGGACCAGCACCACTGA+TGG | - | chr5_4:67515860-67515879 | None:intergenic | 55.0% | |
TCCTACTGCGGTTGCTGTCA+CGG | + | chr5_4:67515873-67515892 | Msa0866100:CDS | 55.0% | |
GGTTGCTGTCACGGATAACG+AGG | + | chr5_4:67515882-67515901 | Msa0866100:CDS | 55.0% | |
GTCAAGCAGCTTGATCGCCT+TGG | + | chr5_4:67515979-67515998 | Msa0866100:CDS | 55.0% | |
GACGGAGGGATGCTTCTGAG+AGG | - | chr5_4:67515014-67515033 | None:intergenic | 60.0% | |
GTCGGTAAGTGTGACGACGG+AGG | - | chr5_4:67515029-67515048 | None:intergenic | 60.0% | |
GGCAGGAGCAAAGGCCTTGA+CGG | - | chr5_4:67515071-67515090 | None:intergenic | 60.0% | |
ACCGTCGCCAATCTAGGTCC+CGG | + | chr5_4:67515091-67515110 | Msa0866100:CDS | 60.0% | |
GGTCCCGGCTTCGATTTCCT+TGG | + | chr5_4:67515106-67515125 | Msa0866100:CDS | 60.0% | |
TTCCTTGGCTGCGCTGTCGA+TGG | + | chr5_4:67515121-67515140 | Msa0866100:CDS | 60.0% | |
GTGGACCCAGATGTTCACCC+CGG | + | chr5_4:67515169-67515188 | Msa0866100:CDS | 60.0% | |
ATTGACAGCAACCGCGGCTG+CGG | - | chr5_4:67515392-67515411 | None:intergenic | 60.0% | |
GTTGCCCCATCCATCATGGG+GGG | + | chr5_4:67515502-67515521 | Msa0866100:CDS | 60.0% | |
TAGGGATGCCGCACCATGTC+TGG | + | chr5_4:67515665-67515684 | Msa0866100:CDS | 60.0% | |
TAGCCAGGCAGCTGCTCTTG+TGG | + | chr5_4:67515693-67515712 | Msa0866100:CDS | 60.0% | |
!! | CAGTGGTGCTGGTCCTACTG+CGG | + | chr5_4:67515861-67515880 | Msa0866100:CDS | 60.0% |
TCCGTGACAGCAACCGCAGT+AGG | - | chr5_4:67515877-67515896 | None:intergenic | 60.0% | |
GACGGAGGGATGCTTCTGAG+AGG | - | chr5_4:67515014-67515033 | None:intergenic | 60.0% | |
GTCGGTAAGTGTGACGACGG+AGG | - | chr5_4:67515029-67515048 | None:intergenic | 60.0% | |
GGCAGGAGCAAAGGCCTTGA+CGG | - | chr5_4:67515071-67515090 | None:intergenic | 60.0% | |
ACCGTCGCCAATCTAGGTCC+CGG | + | chr5_4:67515091-67515110 | Msa0866100:CDS | 60.0% | |
GGTCCCGGCTTCGATTTCCT+TGG | + | chr5_4:67515106-67515125 | Msa0866100:CDS | 60.0% | |
TTCCTTGGCTGCGCTGTCGA+TGG | + | chr5_4:67515121-67515140 | Msa0866100:CDS | 60.0% | |
GTGGACCCAGATGTTCACCC+CGG | + | chr5_4:67515169-67515188 | Msa0866100:CDS | 60.0% | |
ATTGACAGCAACCGCGGCTG+CGG | - | chr5_4:67515392-67515411 | None:intergenic | 60.0% | |
GTTGCCCCATCCATCATGGG+GGG | + | chr5_4:67515502-67515521 | Msa0866100:CDS | 60.0% | |
TAGGGATGCCGCACCATGTC+TGG | + | chr5_4:67515665-67515684 | Msa0866100:CDS | 60.0% | |
TAGCCAGGCAGCTGCTCTTG+TGG | + | chr5_4:67515693-67515712 | Msa0866100:CDS | 60.0% | |
!! | CAGTGGTGCTGGTCCTACTG+CGG | + | chr5_4:67515861-67515880 | Msa0866100:CDS | 60.0% |
TCCGTGACAGCAACCGCAGT+AGG | - | chr5_4:67515877-67515896 | None:intergenic | 60.0% | |
CCTAGATTGGCGACGGTGGC+AGG | - | chr5_4:67515088-67515107 | None:intergenic | 65.0% | |
CCTGCCACCGTCGCCAATCT+AGG | + | chr5_4:67515085-67515104 | Msa0866100:CDS | 65.0% | |
GGGACCTAGATTGGCGACGG+TGG | - | chr5_4:67515092-67515111 | None:intergenic | 65.0% | |
GCCGGGACCTAGATTGGCGA+CGG | - | chr5_4:67515095-67515114 | None:intergenic | 65.0% | |
TGCCATCGACAGCGCAGCCA+AGG | - | chr5_4:67515126-67515145 | None:intergenic | 65.0% | |
GGCTGCGCTGTCGATGGCAT+CGG | + | chr5_4:67515127-67515146 | Msa0866100:CDS | 65.0% | |
ACGCCACAAGAGCAGCTGCC+TGG | - | chr5_4:67515699-67515718 | None:intergenic | 65.0% | |
GGCTGCACCATCAGTGGTGC+TGG | + | chr5_4:67515850-67515869 | Msa0866100:CDS | 65.0% | |
CCTAGATTGGCGACGGTGGC+AGG | - | chr5_4:67515088-67515107 | None:intergenic | 65.0% | |
CCTGCCACCGTCGCCAATCT+AGG | + | chr5_4:67515085-67515104 | Msa0866100:CDS | 65.0% | |
GGGACCTAGATTGGCGACGG+TGG | - | chr5_4:67515092-67515111 | None:intergenic | 65.0% | |
GCCGGGACCTAGATTGGCGA+CGG | - | chr5_4:67515095-67515114 | None:intergenic | 65.0% | |
TGCCATCGACAGCGCAGCCA+AGG | - | chr5_4:67515126-67515145 | None:intergenic | 65.0% | |
GGCTGCGCTGTCGATGGCAT+CGG | + | chr5_4:67515127-67515146 | Msa0866100:CDS | 65.0% | |
ACGCCACAAGAGCAGCTGCC+TGG | - | chr5_4:67515699-67515718 | None:intergenic | 65.0% | |
GGCTGCACCATCAGTGGTGC+TGG | + | chr5_4:67515850-67515869 | Msa0866100:CDS | 65.0% | |
GGCGACGGTGGCAGGAGCAA+AGG | - | chr5_4:67515080-67515099 | None:intergenic | 70.0% | |
GGCGACGGTGGCAGGAGCAA+AGG | - | chr5_4:67515080-67515099 | None:intergenic | 70.0% | |
!! | TGCGGCAGCGCTGGCAGCAC+TGG | - | chr5_4:67515374-67515393 | None:intergenic | 75.0% |
!! | TGCGGCAGCGCTGGCAGCAC+TGG | - | chr5_4:67515374-67515393 | None:intergenic | 75.0% |
! | TGCCAGCGCTGCCGCAGCCG+CGG | + | chr5_4:67515378-67515397 | Msa0866100:CDS | 80.0% |
! | AACCGCGGCTGCGGCAGCGC+TGG | - | chr5_4:67515383-67515402 | None:intergenic | 80.0% |
! | TGCCAGCGCTGCCGCAGCCG+CGG | + | chr5_4:67515378-67515397 | Msa0866100:CDS | 80.0% |
! | AACCGCGGCTGCGGCAGCGC+TGG | - | chr5_4:67515383-67515402 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 67514893 | 67516035 | 67514893 | ID=Msa0866100;Name=Msa0866100 |
chr5_4 | mRNA | 67514893 | 67516035 | 67514893 | ID=Msa0866100-mRNA-1;Parent=Msa0866100;Name=Msa0866100-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|380 |
chr5_4 | exon | 67514893 | 67516035 | 67514893 | ID=Msa0866100-mRNA-1:exon:21323;Parent=Msa0866100-mRNA-1 |
chr5_4 | CDS | 67514893 | 67516035 | 67514893 | ID=Msa0866100-mRNA-1:cds;Parent=Msa0866100-mRNA-1 |
Gene Sequence |
Protein sequence |