Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866010 | XP_003618119.1 | 95.789 | 380 | 10 | 4 | 3 | 379 | 2 | 378 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866010 | sp|Q8L7R2|KHSE_ARATH | 70.889 | 371 | 97 | 4 | 9 | 376 | 6 | 368 | 5.93e-162 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866010 | G7KFG1 | 95.789 | 380 | 10 | 4 | 3 | 379 | 2 | 378 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0279210 | Msa0866010 | 0.823767 | 1.160257e-53 | -8.615850e-47 |
| Msa0279250 | Msa0866010 | 0.802052 | 6.734937e-49 | -8.615850e-47 |
| Msa0318970 | Msa0866010 | 0.814875 | 1.232942e-51 | -8.615850e-47 |
| Msa0864470 | Msa0866010 | 0.805552 | 1.263340e-49 | -8.615850e-47 |
| Msa0866010 | Msa0866100 | 0.969570 | 2.564030e-130 | -8.615850e-47 |
| Msa0866010 | Msa0963090 | 0.818087 | 2.354177e-52 | -8.615850e-47 |
| Msa0866010 | Msa1029080 | 0.817748 | 2.807798e-52 | -8.615850e-47 |
| Msa0866010 | Msa1156170 | 0.817308 | 3.527074e-52 | -8.615850e-47 |
| Msa0866010 | Msa1367630 | 0.981957 | 7.168166e-154 | -8.615850e-47 |
| Msa0866010 | Msa1399240 | 0.978375 | 1.077096e-145 | -8.615850e-47 |
| Msa0866010 | Msa1404240 | 0.802012 | 6.864655e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866010 | MtrunA17_Chr5g0448691 | 95.789 | 380 | 10 | 4 | 3 | 379 | 2 | 378 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866010 | AT2G17265.1 | 70.889 | 371 | 97 | 4 | 9 | 376 | 6 | 368 | 6.03e-163 | 461 |
| Msa0866010 | AT4G35295.1 | 57.143 | 63 | 22 | 1 | 314 | 376 | 54 | 111 | 3.07e-13 | 66.2 |
Find 110 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGTTGGGGCTTCAAATTC+TGG | 0.168994 | 5_4:-67406979 | None:intergenic |
| AAATCAGAAGAGAAGGTTTC+TGG | 0.179307 | 5_4:+67406829 | Msa0866010:CDS |
| TCTTGTGGCGTCAGTGTTAC+AGG | 0.194081 | 5_4:+67407074 | Msa0866010:CDS |
| GCCATTCAAGCTGGAGCTTT+TGG | 0.204037 | 5_4:+67407195 | Msa0866010:CDS |
| TTACCTTTGGGAAGTGGTTT+GGG | 0.235266 | 5_4:+67406712 | Msa0866010:CDS |
| TTTACCTTTGGGAAGTGGTT+TGG | 0.257806 | 5_4:+67406711 | Msa0866010:CDS |
| ATATCCATCTCACATATTTC+TGG | 0.261329 | 5_4:+67406562 | Msa0866010:CDS |
| ATCTCACCGGGGTGAACATC+TGG | 0.273214 | 5_4:-67406541 | None:intergenic |
| CCTGCCACCGTCGCCAATCT+AGG | 0.297972 | 5_4:+67406451 | Msa0866010:CDS |
| TGCAGCGGCGCTGGCAGCAC+TGG | 0.313196 | 5_4:-67406737 | None:intergenic |
| TCTCGAAAAGGGTTTACCTT+TGG | 0.330871 | 5_4:+67406699 | Msa0866010:CDS |
| TTACTGAGTTTGTGGATGTT+AGG | 0.331672 | 5_4:-67406592 | None:intergenic |
| CTCGAAAAGGGTTTACCTTT+GGG | 0.332798 | 5_4:+67406700 | Msa0866010:CDS |
| CTTAGGTTCAACAATCTTAT+CGG | 0.352515 | 5_4:-67407130 | None:intergenic |
| GCAGCACTGCCTTTAGAGAT+AGG | 0.366224 | 5_4:+67407012 | Msa0866010:CDS |
| TCTTTCACTTTCTCTCGAAA+AGG | 0.371475 | 5_4:+67406687 | Msa0866010:CDS |
| TAGGGATGCCGCACCATGTC+TGG | 0.375083 | 5_4:+67407031 | Msa0866010:CDS |
| AAGCGTGCACCATTGATTCC+TGG | 0.387995 | 5_4:+67407150 | Msa0866010:CDS |
| GATTCGCAATTACCAACCTT+TGG | 0.392630 | 5_4:+67406900 | Msa0866010:CDS |
| TGCCAGCGCCGCTGCAGCCG+CGG | 0.400058 | 5_4:+67406744 | Msa0866010:CDS |
| AACCGCGGCTGCAGCGGCGC+TGG | 0.405837 | 5_4:-67406746 | None:intergenic |
| GGCTGCACCATCAGTGGTGC+TGG | 0.412382 | 5_4:+67407216 | Msa0866010:CDS |
| CCTAGATTGGCGACGGTGGC+AGG | 0.418200 | 5_4:-67406451 | None:intergenic |
| ATCGAAGCCGGGACCTAGAT+TGG | 0.418554 | 5_4:-67406464 | None:intergenic |
| TTGCTGTCAATGAGATCTTC+GGG | 0.419028 | 5_4:+67406767 | Msa0866010:CDS |
| CTTTCACTTTCTCTCGAAAA+GGG | 0.421777 | 5_4:+67406688 | Msa0866010:CDS |
| GTTGCTGTCAATGAGATCTT+CGG | 0.437235 | 5_4:+67406766 | Msa0866010:CDS |
| ACGCCACAAGAGCAGCTGCC+TGG | 0.444695 | 5_4:-67407062 | None:intergenic |
| TCCTACTGCGGTTGCTGTCA+CGG | 0.459444 | 5_4:+67407239 | Msa0866010:CDS |
| GGAATCAATGGTGCACGCTT+AGG | 0.462471 | 5_4:-67407147 | None:intergenic |
| GCCAAAAGCTCCAGCTTGAA+TGG | 0.464692 | 5_4:-67407196 | None:intergenic |
| GGTCCCGGCTTCGATTTCCT+TGG | 0.466367 | 5_4:+67406472 | Msa0866010:CDS |
| GGCAGGAGCAAAGGCCTTGA+CGG | 0.467231 | 5_4:-67406434 | None:intergenic |
| GCAGCCAAGGAAATCGAAGC+CGG | 0.468475 | 5_4:-67406476 | None:intergenic |
| AAGGGTTTACCTTTGGGAAG+TGG | 0.480325 | 5_4:+67406706 | Msa0866010:CDS |
| CAATGTTGCCCCATCCATCA+TGG | 0.480430 | 5_4:+67406864 | Msa0866010:CDS |
| AACATCTGGGTCCACTTTGA+CGG | 0.481780 | 5_4:-67406527 | None:intergenic |
| CTTGTGGCGTCAGTGTTACA+GGG | 0.482574 | 5_4:+67407075 | Msa0866010:CDS |
| GACAGCAACCGCGGCTGCAG+CGG | 0.482714 | 5_4:-67406752 | None:intergenic |
| CATGTTGTTGAAGCAGCCAT+TGG | 0.487615 | 5_4:-67406259 | None:intergenic |
| CTTCTCTTCTGATTTCAAGC+AGG | 0.492990 | 5_4:-67406821 | None:intergenic |
| CAACAATCTTATCGGAGGAC+AGG | 0.494191 | 5_4:-67407122 | None:intergenic |
| AAGAAGGCTGCCATTCAAGC+TGG | 0.496033 | 5_4:+67407186 | Msa0866010:CDS |
| TGTTTGAAATTAAAGGAAAG+TGG | 0.496328 | 5_4:-67406304 | None:intergenic |
| CCATGTCTGGAATTCTAGCC+AGG | 0.497827 | 5_4:+67407044 | Msa0866010:CDS |
| AGCGTGCACCATTGATTCCT+GGG | 0.501591 | 5_4:+67407151 | Msa0866010:CDS |
| TGTCACGGATAACGAGGAAA+AGG | 0.505606 | 5_4:+67407254 | Msa0866010:CDS |
| GCATCCATCCCAGGAATCAA+TGG | 0.507028 | 5_4:-67407159 | None:intergenic |
| TGCCATCGACAGCGCAGCCA+AGG | 0.508599 | 5_4:-67406489 | None:intergenic |
| GTCACGGATAACGAGGAAAA+GGG | 0.510190 | 5_4:+67407255 | Msa0866010:CDS |
| ACCTGTTTATTCTTCCGTCA+AGG | 0.511408 | 5_4:+67406420 | Msa0866010:CDS |
| GTCAAGCAGCTTGATCGCCT+TGG | 0.519083 | 5_4:+67407345 | Msa0866010:CDS |
| GGCTGCGCTGTCGATGGCAT+CGG | 0.519529 | 5_4:+67406493 | Msa0866010:CDS |
| ACGGAAGAATAAACAGGTGG+TGG | 0.522057 | 5_4:-67406415 | None:intergenic |
| ACCGTCGCCAATCTAGGTCC+CGG | 0.523818 | 5_4:+67406457 | Msa0866010:CDS |
| ACGGCATCAATTCCAAAGGT+TGG | 0.527087 | 5_4:-67406912 | None:intergenic |
| AATGTTGCCCCATCCATCAT+GGG | 0.527769 | 5_4:+67406865 | Msa0866010:CDS |
| GGCGACGGTGGCAGGAGCAA+AGG | 0.532400 | 5_4:-67406443 | None:intergenic |
| TAGCCAGGCAGCTGCTCTTG+TGG | 0.536109 | 5_4:+67407059 | Msa0866010:CDS |
| AACCCTCTTTGGAACTGCGC+TGG | 0.536246 | 5_4:+67406616 | Msa0866010:CDS |
| CAGCACTGCCTTTAGAGATA+GGG | 0.537569 | 5_4:+67407013 | Msa0866010:CDS |
| GCGATCAAGCTGCTTGACAT+TGG | 0.539004 | 5_4:-67407340 | None:intergenic |
| CAGCCAAGGAAATCGAAGCC+GGG | 0.542736 | 5_4:-67406475 | None:intergenic |
| TTCTTGACAGCATCCATCCC+AGG | 0.549795 | 5_4:-67407168 | None:intergenic |
| TGCGGCATCCCTATCTCTAA+AGG | 0.558659 | 5_4:-67407021 | None:intergenic |
| TGGGATGGATGCTGTCAAGA+AGG | 0.561159 | 5_4:+67407170 | Msa0866010:CDS |
| GCCTTGACGGAAGAATAAAC+AGG | 0.565015 | 5_4:-67406421 | None:intergenic |
| TCTCACCGGGGTGAACATCT+GGG | 0.567871 | 5_4:-67406540 | None:intergenic |
| TGCACCATTGATTCCTGGGA+TGG | 0.572503 | 5_4:+67407155 | Msa0866010:CDS |
| GGATTTGTTCATGTTAGGGA+AGG | 0.572617 | 5_4:+67407098 | Msa0866010:CDS |
| CTGCTTGAAATCAGAAGAGA+AGG | 0.573937 | 5_4:+67406822 | Msa0866010:CDS |
| ATGTGAGATGGATATCTCAC+CGG | 0.575914 | 5_4:-67406554 | None:intergenic |
| AGTAGGACCAGCACCACTGA+TGG | 0.581134 | 5_4:-67407223 | None:intergenic |
| TGTGAGATGGATATCTCACC+GGG | 0.582722 | 5_4:-67406553 | None:intergenic |
| TACCAGCGCAGTTCCAAAGA+GGG | 0.584554 | 5_4:-67406618 | None:intergenic |
| ATTTCAAGCAGGCGAGAACA+AGG | 0.584734 | 5_4:-67406810 | None:intergenic |
| TCGGTAAGTGTGACGACGGA+GGG | 0.586137 | 5_4:-67406391 | None:intergenic |
| AGAATAAACAGGTGGTGGGT+CGG | 0.588466 | 5_4:-67406410 | None:intergenic |
| AACAATCTTATCGGAGGACA+GGG | 0.598923 | 5_4:-67407121 | None:intergenic |
| TTCAACGGCATCAATTCCAA+AGG | 0.604897 | 5_4:-67406916 | None:intergenic |
| ATGCTCCGCATTCGATCCGT+CGG | 0.611634 | 5_4:+67406664 | Msa0866010:CDS |
| GCCGGGACCTAGATTGGCGA+CGG | 0.611775 | 5_4:-67406458 | None:intergenic |
| TTGACCAGAAATATGTGAGA+TGG | 0.612753 | 5_4:-67406566 | None:intergenic |
| ATGTTGCCCCATCCATCATG+GGG | 0.617492 | 5_4:+67406866 | Msa0866010:CDS |
| GTTGCCCCATCCATCATGGG+GGG | 0.619596 | 5_4:+67406868 | Msa0866010:CDS |
| CTTCGGGAAAAGATTGAGTG+TGG | 0.620572 | 5_4:+67406783 | Msa0866010:CDS |
| CCTGGCTAGAATTCCAGACA+TGG | 0.621126 | 5_4:-67407044 | None:intergenic |
| AAAGACCGACGGATCGAATG+CGG | 0.626540 | 5_4:-67406669 | None:intergenic |
| TGACACTGTCTCCGTCAAAG+TGG | 0.628597 | 5_4:+67406516 | Msa0866010:CDS |
| GCACATCATTGCTCAACACA+TGG | 0.632675 | 5_4:+67407278 | Msa0866010:CDS |
| CGGAAGAATAAACAGGTGGT+GGG | 0.638411 | 5_4:-67406414 | None:intergenic |
| AGGTTCAACAATCTTATCGG+AGG | 0.639350 | 5_4:-67407127 | None:intergenic |
| CTAGAATTCCAGACATGGTG+CGG | 0.639933 | 5_4:-67407039 | None:intergenic |
| GATCTCATTGACAGCAACCG+CGG | 0.645517 | 5_4:-67406761 | None:intergenic |
| TCACGGATAACGAGGAAAAG+GGG | 0.649323 | 5_4:+67407256 | Msa0866010:CDS |
| TCCGTGACAGCAACCGCAGT+AGG | 0.650384 | 5_4:-67407240 | None:intergenic |
| TTGTGGCGTCAGTGTTACAG+GGG | 0.658642 | 5_4:+67407076 | Msa0866010:CDS |
| GGTTGCTGTCACGGATAACG+AGG | 0.663758 | 5_4:+67407248 | Msa0866010:CDS |
| GATCCCAAACCACTTCCCAA+AGG | 0.668028 | 5_4:-67406715 | None:intergenic |
| GACGGAGGGATGCTTCTGAG+AGG | 0.670246 | 5_4:-67406377 | None:intergenic |
| GTCGGTAAGTGTGACGACGG+AGG | 0.671687 | 5_4:-67406392 | None:intergenic |
| ATACCAGCGCAGTTCCAAAG+AGG | 0.675755 | 5_4:-67406619 | None:intergenic |
| TGTGGCGTCAGTGTTACAGG+GGG | 0.680350 | 5_4:+67407077 | Msa0866010:CDS |
| GAGAGAAAGTGAAAGACCGA+CGG | 0.682882 | 5_4:-67406680 | None:intergenic |
| TGCTAATAAGTCTAGCACCA+AGG | 0.687849 | 5_4:-67407362 | None:intergenic |
| CAGTGGTGCTGGTCCTACTG+CGG | 0.694225 | 5_4:+67407227 | Msa0866010:CDS |
| TGTTGCCCCATCCATCATGG+GGG | 0.701496 | 5_4:+67406867 | Msa0866010:CDS |
| TGGGTCGGTAAGTGTGACGA+CGG | 0.704433 | 5_4:-67406395 | None:intergenic |
| TTGACGGAAGAATAAACAGG+TGG | 0.720068 | 5_4:-67406418 | None:intergenic |
| GTGAGATGGATATCTCACCG+GGG | 0.829626 | 5_4:-67406552 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTTTTGTTTGAAATTAA+AGG | - | chr5_4:67406314-67406333 | None:intergenic | 15.0% |
| !!! | ATTCTTTTGTTTGAAATTAA+AGG | - | chr5_4:67406314-67406333 | None:intergenic | 15.0% |
| !! | TGTTTGAAATTAAAGGAAAG+TGG | - | chr5_4:67406307-67406326 | None:intergenic | 25.0% |
| !!! | AATATAGCTGTTTTTCAGAT+GGG | - | chr5_4:67406945-67406964 | None:intergenic | 25.0% |
| !!! | AAATATAGCTGTTTTTCAGA+TGG | - | chr5_4:67406946-67406965 | None:intergenic | 25.0% |
| !! | TGTTTGAAATTAAAGGAAAG+TGG | - | chr5_4:67406307-67406326 | None:intergenic | 25.0% |
| !!! | AATATAGCTGTTTTTCAGAT+GGG | - | chr5_4:67406945-67406964 | None:intergenic | 25.0% |
| !!! | AAATATAGCTGTTTTTCAGA+TGG | - | chr5_4:67406946-67406965 | None:intergenic | 25.0% |
| ATATCCATCTCACATATTTC+TGG | + | chr5_4:67406562-67406581 | Msa0866010:CDS | 30.0% | |
| !!! | TGCTCTCATTTTTTTAGTTG+GGG | - | chr5_4:67406995-67407014 | None:intergenic | 30.0% |
| !!! | CTGCTCTCATTTTTTTAGTT+GGG | - | chr5_4:67406996-67407015 | None:intergenic | 30.0% |
| CTTAGGTTCAACAATCTTAT+CGG | - | chr5_4:67407133-67407152 | None:intergenic | 30.0% | |
| ATATCCATCTCACATATTTC+TGG | + | chr5_4:67406562-67406581 | Msa0866010:CDS | 30.0% | |
| !!! | TGCTCTCATTTTTTTAGTTG+GGG | - | chr5_4:67406995-67407014 | None:intergenic | 30.0% |
| !!! | CTGCTCTCATTTTTTTAGTT+GGG | - | chr5_4:67406996-67407015 | None:intergenic | 30.0% |
| CTTAGGTTCAACAATCTTAT+CGG | - | chr5_4:67407133-67407152 | None:intergenic | 30.0% | |
| TTGACCAGAAATATGTGAGA+TGG | - | chr5_4:67406569-67406588 | None:intergenic | 35.0% | |
| TTACTGAGTTTGTGGATGTT+AGG | - | chr5_4:67406595-67406614 | None:intergenic | 35.0% | |
| AACTCAGTAAAAACCCTCTT+TGG | + | chr5_4:67406605-67406624 | Msa0866010:CDS | 35.0% | |
| TCTTTCACTTTCTCTCGAAA+AGG | + | chr5_4:67406687-67406706 | Msa0866010:CDS | 35.0% | |
| CTTTCACTTTCTCTCGAAAA+GGG | + | chr5_4:67406688-67406707 | Msa0866010:CDS | 35.0% | |
| AAATCAGAAGAGAAGGTTTC+TGG | + | chr5_4:67406829-67406848 | Msa0866010:CDS | 35.0% | |
| ! | TTTTCAGATGGGAACTTCAA+CGG | - | chr5_4:67406934-67406953 | None:intergenic | 35.0% |
| !!! | GCTGCTCTCATTTTTTTAGT+TGG | - | chr5_4:67406997-67407016 | None:intergenic | 35.0% |
| ! | CATGGTTCAAGCTTTTCAAA+AGG | + | chr5_4:67407296-67407315 | Msa0866010:CDS | 35.0% |
| ! | GTTCAAGCTTTTCAAAAGGA+AGG | + | chr5_4:67407300-67407319 | Msa0866010:CDS | 35.0% |
| TTGACCAGAAATATGTGAGA+TGG | - | chr5_4:67406569-67406588 | None:intergenic | 35.0% | |
| TTACTGAGTTTGTGGATGTT+AGG | - | chr5_4:67406595-67406614 | None:intergenic | 35.0% | |
| AACTCAGTAAAAACCCTCTT+TGG | + | chr5_4:67406605-67406624 | Msa0866010:CDS | 35.0% | |
| TCTTTCACTTTCTCTCGAAA+AGG | + | chr5_4:67406687-67406706 | Msa0866010:CDS | 35.0% | |
| CTTTCACTTTCTCTCGAAAA+GGG | + | chr5_4:67406688-67406707 | Msa0866010:CDS | 35.0% | |
| AAATCAGAAGAGAAGGTTTC+TGG | + | chr5_4:67406829-67406848 | Msa0866010:CDS | 35.0% | |
| ! | TTTTCAGATGGGAACTTCAA+CGG | - | chr5_4:67406934-67406953 | None:intergenic | 35.0% |
| !!! | GCTGCTCTCATTTTTTTAGT+TGG | - | chr5_4:67406997-67407016 | None:intergenic | 35.0% |
| ! | CATGGTTCAAGCTTTTCAAA+AGG | + | chr5_4:67407296-67407315 | Msa0866010:CDS | 35.0% |
| ! | GTTCAAGCTTTTCAAAAGGA+AGG | + | chr5_4:67407300-67407319 | Msa0866010:CDS | 35.0% |
| TTGACGGAAGAATAAACAGG+TGG | - | chr5_4:67406421-67406440 | None:intergenic | 40.0% | |
| ACCTGTTTATTCTTCCGTCA+AGG | + | chr5_4:67406420-67406439 | Msa0866010:CDS | 40.0% | |
| ATGTGAGATGGATATCTCAC+CGG | - | chr5_4:67406557-67406576 | None:intergenic | 40.0% | |
| ! | GAGGGTTTTTACTGAGTTTG+TGG | - | chr5_4:67406603-67406622 | None:intergenic | 40.0% |
| ! | CATTTTCATGGCTTCGATAG+CGG | - | chr5_4:67406647-67406666 | None:intergenic | 40.0% |
| TCTCGAAAAGGGTTTACCTT+TGG | + | chr5_4:67406699-67406718 | Msa0866010:CDS | 40.0% | |
| CTCGAAAAGGGTTTACCTTT+GGG | + | chr5_4:67406700-67406719 | Msa0866010:CDS | 40.0% | |
| ! | TTTACCTTTGGGAAGTGGTT+TGG | + | chr5_4:67406711-67406730 | Msa0866010:CDS | 40.0% |
| ! | TTACCTTTGGGAAGTGGTTT+GGG | + | chr5_4:67406712-67406731 | Msa0866010:CDS | 40.0% |
| GTTGCTGTCAATGAGATCTT+CGG | + | chr5_4:67406766-67406785 | Msa0866010:CDS | 40.0% | |
| TTGCTGTCAATGAGATCTTC+GGG | + | chr5_4:67406767-67406786 | Msa0866010:CDS | 40.0% | |
| CTTCTCTTCTGATTTCAAGC+AGG | - | chr5_4:67406824-67406843 | None:intergenic | 40.0% | |
| CTGCTTGAAATCAGAAGAGA+AGG | + | chr5_4:67406822-67406841 | Msa0866010:CDS | 40.0% | |
| GATTCGCAATTACCAACCTT+TGG | + | chr5_4:67406900-67406919 | Msa0866010:CDS | 40.0% | |
| TTCAACGGCATCAATTCCAA+AGG | - | chr5_4:67406919-67406938 | None:intergenic | 40.0% | |
| TTAGTTGGGGCTTCAAATTC+TGG | - | chr5_4:67406982-67407001 | None:intergenic | 40.0% | |
| ! | AGGGGGATTTGTTCATGTTA+GGG | + | chr5_4:67407094-67407113 | Msa0866010:CDS | 40.0% |
| ! | GGATTTGTTCATGTTAGGGA+AGG | + | chr5_4:67407098-67407117 | Msa0866010:CDS | 40.0% |
| AACAATCTTATCGGAGGACA+GGG | - | chr5_4:67407124-67407143 | None:intergenic | 40.0% | |
| AGGTTCAACAATCTTATCGG+AGG | - | chr5_4:67407130-67407149 | None:intergenic | 40.0% | |
| TGCTAATAAGTCTAGCACCA+AGG | - | chr5_4:67407365-67407384 | None:intergenic | 40.0% | |
| TTGACGGAAGAATAAACAGG+TGG | - | chr5_4:67406421-67406440 | None:intergenic | 40.0% | |
| ACCTGTTTATTCTTCCGTCA+AGG | + | chr5_4:67406420-67406439 | Msa0866010:CDS | 40.0% | |
| ATGTGAGATGGATATCTCAC+CGG | - | chr5_4:67406557-67406576 | None:intergenic | 40.0% | |
| ! | GAGGGTTTTTACTGAGTTTG+TGG | - | chr5_4:67406603-67406622 | None:intergenic | 40.0% |
| ! | CATTTTCATGGCTTCGATAG+CGG | - | chr5_4:67406647-67406666 | None:intergenic | 40.0% |
| TCTCGAAAAGGGTTTACCTT+TGG | + | chr5_4:67406699-67406718 | Msa0866010:CDS | 40.0% | |
| CTCGAAAAGGGTTTACCTTT+GGG | + | chr5_4:67406700-67406719 | Msa0866010:CDS | 40.0% | |
| ! | TTTACCTTTGGGAAGTGGTT+TGG | + | chr5_4:67406711-67406730 | Msa0866010:CDS | 40.0% |
| ! | TTACCTTTGGGAAGTGGTTT+GGG | + | chr5_4:67406712-67406731 | Msa0866010:CDS | 40.0% |
| GTTGCTGTCAATGAGATCTT+CGG | + | chr5_4:67406766-67406785 | Msa0866010:CDS | 40.0% | |
| TTGCTGTCAATGAGATCTTC+GGG | + | chr5_4:67406767-67406786 | Msa0866010:CDS | 40.0% | |
| CTTCTCTTCTGATTTCAAGC+AGG | - | chr5_4:67406824-67406843 | None:intergenic | 40.0% | |
| CTGCTTGAAATCAGAAGAGA+AGG | + | chr5_4:67406822-67406841 | Msa0866010:CDS | 40.0% | |
| GATTCGCAATTACCAACCTT+TGG | + | chr5_4:67406900-67406919 | Msa0866010:CDS | 40.0% | |
| TTCAACGGCATCAATTCCAA+AGG | - | chr5_4:67406919-67406938 | None:intergenic | 40.0% | |
| TTAGTTGGGGCTTCAAATTC+TGG | - | chr5_4:67406982-67407001 | None:intergenic | 40.0% | |
| ! | AGGGGGATTTGTTCATGTTA+GGG | + | chr5_4:67407094-67407113 | Msa0866010:CDS | 40.0% |
| ! | GGATTTGTTCATGTTAGGGA+AGG | + | chr5_4:67407098-67407117 | Msa0866010:CDS | 40.0% |
| AACAATCTTATCGGAGGACA+GGG | - | chr5_4:67407124-67407143 | None:intergenic | 40.0% | |
| AGGTTCAACAATCTTATCGG+AGG | - | chr5_4:67407130-67407149 | None:intergenic | 40.0% | |
| TGCTAATAAGTCTAGCACCA+AGG | - | chr5_4:67407365-67407384 | None:intergenic | 40.0% | |
| !! | AGAATAAACAGGTGGTGGGT+CGG | - | chr5_4:67406413-67406432 | None:intergenic | 45.0% |
| CGGAAGAATAAACAGGTGGT+GGG | - | chr5_4:67406417-67406436 | None:intergenic | 45.0% | |
| ACGGAAGAATAAACAGGTGG+TGG | - | chr5_4:67406418-67406437 | None:intergenic | 45.0% | |
| GCCTTGACGGAAGAATAAAC+AGG | - | chr5_4:67406424-67406443 | None:intergenic | 45.0% | |
| AACATCTGGGTCCACTTTGA+CGG | - | chr5_4:67406530-67406549 | None:intergenic | 45.0% | |
| TGTGAGATGGATATCTCACC+GGG | - | chr5_4:67406556-67406575 | None:intergenic | 45.0% | |
| !! | TCGAATGCGGAGCATTTTCA+TGG | - | chr5_4:67406659-67406678 | None:intergenic | 45.0% |
| GAGAGAAAGTGAAAGACCGA+CGG | - | chr5_4:67406683-67406702 | None:intergenic | 45.0% | |
| ! | AAGGGTTTACCTTTGGGAAG+TGG | + | chr5_4:67406706-67406725 | Msa0866010:CDS | 45.0% |
| CTTCGGGAAAAGATTGAGTG+TGG | + | chr5_4:67406783-67406802 | Msa0866010:CDS | 45.0% | |
| ATTTCAAGCAGGCGAGAACA+AGG | - | chr5_4:67406813-67406832 | None:intergenic | 45.0% | |
| AATGTTGCCCCATCCATCAT+GGG | + | chr5_4:67406865-67406884 | Msa0866010:CDS | 45.0% | |
| ACGGCATCAATTCCAAAGGT+TGG | - | chr5_4:67406915-67406934 | None:intergenic | 45.0% | |
| ! | CAGCACTGCCTTTAGAGATA+GGG | + | chr5_4:67407013-67407032 | Msa0866010:CDS | 45.0% |
| CTAGAATTCCAGACATGGTG+CGG | - | chr5_4:67407042-67407061 | None:intergenic | 45.0% | |
| ! | CAGGGGGATTTGTTCATGTT+AGG | + | chr5_4:67407093-67407112 | Msa0866010:CDS | 45.0% |
| CAACAATCTTATCGGAGGAC+AGG | - | chr5_4:67407125-67407144 | None:intergenic | 45.0% | |
| TGTCACGGATAACGAGGAAA+AGG | + | chr5_4:67407254-67407273 | Msa0866010:CDS | 45.0% | |
| GTCACGGATAACGAGGAAAA+GGG | + | chr5_4:67407255-67407274 | Msa0866010:CDS | 45.0% | |
| TCACGGATAACGAGGAAAAG+GGG | + | chr5_4:67407256-67407275 | Msa0866010:CDS | 45.0% | |
| GCACATCATTGCTCAACACA+TGG | + | chr5_4:67407278-67407297 | Msa0866010:CDS | 45.0% | |
| !! | AGAATAAACAGGTGGTGGGT+CGG | - | chr5_4:67406413-67406432 | None:intergenic | 45.0% |
| CGGAAGAATAAACAGGTGGT+GGG | - | chr5_4:67406417-67406436 | None:intergenic | 45.0% | |
| ACGGAAGAATAAACAGGTGG+TGG | - | chr5_4:67406418-67406437 | None:intergenic | 45.0% | |
| GCCTTGACGGAAGAATAAAC+AGG | - | chr5_4:67406424-67406443 | None:intergenic | 45.0% | |
| AACATCTGGGTCCACTTTGA+CGG | - | chr5_4:67406530-67406549 | None:intergenic | 45.0% | |
| TGTGAGATGGATATCTCACC+GGG | - | chr5_4:67406556-67406575 | None:intergenic | 45.0% | |
| !! | TCGAATGCGGAGCATTTTCA+TGG | - | chr5_4:67406659-67406678 | None:intergenic | 45.0% |
| GAGAGAAAGTGAAAGACCGA+CGG | - | chr5_4:67406683-67406702 | None:intergenic | 45.0% | |
| ! | AAGGGTTTACCTTTGGGAAG+TGG | + | chr5_4:67406706-67406725 | Msa0866010:CDS | 45.0% |
| CTTCGGGAAAAGATTGAGTG+TGG | + | chr5_4:67406783-67406802 | Msa0866010:CDS | 45.0% | |
| ATTTCAAGCAGGCGAGAACA+AGG | - | chr5_4:67406813-67406832 | None:intergenic | 45.0% | |
| AATGTTGCCCCATCCATCAT+GGG | + | chr5_4:67406865-67406884 | Msa0866010:CDS | 45.0% | |
| ACGGCATCAATTCCAAAGGT+TGG | - | chr5_4:67406915-67406934 | None:intergenic | 45.0% | |
| ! | CAGCACTGCCTTTAGAGATA+GGG | + | chr5_4:67407013-67407032 | Msa0866010:CDS | 45.0% |
| CTAGAATTCCAGACATGGTG+CGG | - | chr5_4:67407042-67407061 | None:intergenic | 45.0% | |
| ! | CAGGGGGATTTGTTCATGTT+AGG | + | chr5_4:67407093-67407112 | Msa0866010:CDS | 45.0% |
| CAACAATCTTATCGGAGGAC+AGG | - | chr5_4:67407125-67407144 | None:intergenic | 45.0% | |
| TGTCACGGATAACGAGGAAA+AGG | + | chr5_4:67407254-67407273 | Msa0866010:CDS | 45.0% | |
| GTCACGGATAACGAGGAAAA+GGG | + | chr5_4:67407255-67407274 | Msa0866010:CDS | 45.0% | |
| TCACGGATAACGAGGAAAAG+GGG | + | chr5_4:67407256-67407275 | Msa0866010:CDS | 45.0% | |
| GCACATCATTGCTCAACACA+TGG | + | chr5_4:67407278-67407297 | Msa0866010:CDS | 45.0% | |
| TGACACTGTCTCCGTCAAAG+TGG | + | chr5_4:67406516-67406535 | Msa0866010:CDS | 50.0% | |
| GTGAGATGGATATCTCACCG+GGG | - | chr5_4:67406555-67406574 | None:intergenic | 50.0% | |
| TACCAGCGCAGTTCCAAAGA+GGG | - | chr5_4:67406621-67406640 | None:intergenic | 50.0% | |
| ATACCAGCGCAGTTCCAAAG+AGG | - | chr5_4:67406622-67406641 | None:intergenic | 50.0% | |
| AAAGACCGACGGATCGAATG+CGG | - | chr5_4:67406672-67406691 | None:intergenic | 50.0% | |
| GATCCCAAACCACTTCCCAA+AGG | - | chr5_4:67406718-67406737 | None:intergenic | 50.0% | |
| GATCTCATTGACAGCAACCG+CGG | - | chr5_4:67406764-67406783 | None:intergenic | 50.0% | |
| CAATGTTGCCCCATCCATCA+TGG | + | chr5_4:67406864-67406883 | Msa0866010:CDS | 50.0% | |
| ATGTTGCCCCATCCATCATG+GGG | + | chr5_4:67406866-67406885 | Msa0866010:CDS | 50.0% | |
| !! | AAAACCCCCCATGATGGATG+GGG | - | chr5_4:67406875-67406894 | None:intergenic | 50.0% |
| !! | CAAAACCCCCCATGATGGAT+GGG | - | chr5_4:67406876-67406895 | None:intergenic | 50.0% |
| ! | ACAAAACCCCCCATGATGGA+TGG | - | chr5_4:67406877-67406896 | None:intergenic | 50.0% |
| CAACACAAAACCCCCCATGA+TGG | - | chr5_4:67406881-67406900 | None:intergenic | 50.0% | |
| ! | GCAGCACTGCCTTTAGAGAT+AGG | + | chr5_4:67407012-67407031 | Msa0866010:CDS | 50.0% |
| TGCGGCATCCCTATCTCTAA+AGG | - | chr5_4:67407024-67407043 | None:intergenic | 50.0% | |
| CCTGGCTAGAATTCCAGACA+TGG | - | chr5_4:67407047-67407066 | None:intergenic | 50.0% | |
| ! | CCATGTCTGGAATTCTAGCC+AGG | + | chr5_4:67407044-67407063 | Msa0866010:CDS | 50.0% |
| TCTTGTGGCGTCAGTGTTAC+AGG | + | chr5_4:67407074-67407093 | Msa0866010:CDS | 50.0% | |
| CTTGTGGCGTCAGTGTTACA+GGG | + | chr5_4:67407075-67407094 | Msa0866010:CDS | 50.0% | |
| TTGTGGCGTCAGTGTTACAG+GGG | + | chr5_4:67407076-67407095 | Msa0866010:CDS | 50.0% | |
| GGAATCAATGGTGCACGCTT+AGG | - | chr5_4:67407150-67407169 | None:intergenic | 50.0% | |
| !! | AAGCGTGCACCATTGATTCC+TGG | + | chr5_4:67407150-67407169 | Msa0866010:CDS | 50.0% |
| !! | AGCGTGCACCATTGATTCCT+GGG | + | chr5_4:67407151-67407170 | Msa0866010:CDS | 50.0% |
| !! | TGCACCATTGATTCCTGGGA+TGG | + | chr5_4:67407155-67407174 | Msa0866010:CDS | 50.0% |
| GCATCCATCCCAGGAATCAA+TGG | - | chr5_4:67407162-67407181 | None:intergenic | 50.0% | |
| TTCTTGACAGCATCCATCCC+AGG | - | chr5_4:67407171-67407190 | None:intergenic | 50.0% | |
| TGGGATGGATGCTGTCAAGA+AGG | + | chr5_4:67407170-67407189 | Msa0866010:CDS | 50.0% | |
| AAGAAGGCTGCCATTCAAGC+TGG | + | chr5_4:67407186-67407205 | Msa0866010:CDS | 50.0% | |
| ! | GCCATTCAAGCTGGAGCTTT+TGG | + | chr5_4:67407195-67407214 | Msa0866010:CDS | 50.0% |
| GCCAAAAGCTCCAGCTTGAA+TGG | - | chr5_4:67407199-67407218 | None:intergenic | 50.0% | |
| GCGATCAAGCTGCTTGACAT+TGG | - | chr5_4:67407343-67407362 | None:intergenic | 50.0% | |
| TGACACTGTCTCCGTCAAAG+TGG | + | chr5_4:67406516-67406535 | Msa0866010:CDS | 50.0% | |
| GTGAGATGGATATCTCACCG+GGG | - | chr5_4:67406555-67406574 | None:intergenic | 50.0% | |
| TACCAGCGCAGTTCCAAAGA+GGG | - | chr5_4:67406621-67406640 | None:intergenic | 50.0% | |
| ATACCAGCGCAGTTCCAAAG+AGG | - | chr5_4:67406622-67406641 | None:intergenic | 50.0% | |
| AAAGACCGACGGATCGAATG+CGG | - | chr5_4:67406672-67406691 | None:intergenic | 50.0% | |
| GATCCCAAACCACTTCCCAA+AGG | - | chr5_4:67406718-67406737 | None:intergenic | 50.0% | |
| GATCTCATTGACAGCAACCG+CGG | - | chr5_4:67406764-67406783 | None:intergenic | 50.0% | |
| CAATGTTGCCCCATCCATCA+TGG | + | chr5_4:67406864-67406883 | Msa0866010:CDS | 50.0% | |
| ATGTTGCCCCATCCATCATG+GGG | + | chr5_4:67406866-67406885 | Msa0866010:CDS | 50.0% | |
| !! | AAAACCCCCCATGATGGATG+GGG | - | chr5_4:67406875-67406894 | None:intergenic | 50.0% |
| !! | CAAAACCCCCCATGATGGAT+GGG | - | chr5_4:67406876-67406895 | None:intergenic | 50.0% |
| ! | ACAAAACCCCCCATGATGGA+TGG | - | chr5_4:67406877-67406896 | None:intergenic | 50.0% |
| CAACACAAAACCCCCCATGA+TGG | - | chr5_4:67406881-67406900 | None:intergenic | 50.0% | |
| ! | GCAGCACTGCCTTTAGAGAT+AGG | + | chr5_4:67407012-67407031 | Msa0866010:CDS | 50.0% |
| TGCGGCATCCCTATCTCTAA+AGG | - | chr5_4:67407024-67407043 | None:intergenic | 50.0% | |
| CCTGGCTAGAATTCCAGACA+TGG | - | chr5_4:67407047-67407066 | None:intergenic | 50.0% | |
| ! | CCATGTCTGGAATTCTAGCC+AGG | + | chr5_4:67407044-67407063 | Msa0866010:CDS | 50.0% |
| TCTTGTGGCGTCAGTGTTAC+AGG | + | chr5_4:67407074-67407093 | Msa0866010:CDS | 50.0% | |
| CTTGTGGCGTCAGTGTTACA+GGG | + | chr5_4:67407075-67407094 | Msa0866010:CDS | 50.0% | |
| TTGTGGCGTCAGTGTTACAG+GGG | + | chr5_4:67407076-67407095 | Msa0866010:CDS | 50.0% | |
| GGAATCAATGGTGCACGCTT+AGG | - | chr5_4:67407150-67407169 | None:intergenic | 50.0% | |
| !! | AAGCGTGCACCATTGATTCC+TGG | + | chr5_4:67407150-67407169 | Msa0866010:CDS | 50.0% |
| !! | AGCGTGCACCATTGATTCCT+GGG | + | chr5_4:67407151-67407170 | Msa0866010:CDS | 50.0% |
| !! | TGCACCATTGATTCCTGGGA+TGG | + | chr5_4:67407155-67407174 | Msa0866010:CDS | 50.0% |
| GCATCCATCCCAGGAATCAA+TGG | - | chr5_4:67407162-67407181 | None:intergenic | 50.0% | |
| TTCTTGACAGCATCCATCCC+AGG | - | chr5_4:67407171-67407190 | None:intergenic | 50.0% | |
| TGGGATGGATGCTGTCAAGA+AGG | + | chr5_4:67407170-67407189 | Msa0866010:CDS | 50.0% | |
| AAGAAGGCTGCCATTCAAGC+TGG | + | chr5_4:67407186-67407205 | Msa0866010:CDS | 50.0% | |
| ! | GCCATTCAAGCTGGAGCTTT+TGG | + | chr5_4:67407195-67407214 | Msa0866010:CDS | 50.0% |
| GCCAAAAGCTCCAGCTTGAA+TGG | - | chr5_4:67407199-67407218 | None:intergenic | 50.0% | |
| GCGATCAAGCTGCTTGACAT+TGG | - | chr5_4:67407343-67407362 | None:intergenic | 50.0% | |
| TCGGTAAGTGTGACGACGGA+GGG | - | chr5_4:67406394-67406413 | None:intergenic | 55.0% | |
| TGGGTCGGTAAGTGTGACGA+CGG | - | chr5_4:67406398-67406417 | None:intergenic | 55.0% | |
| ATCGAAGCCGGGACCTAGAT+TGG | - | chr5_4:67406467-67406486 | None:intergenic | 55.0% | |
| CAGCCAAGGAAATCGAAGCC+GGG | - | chr5_4:67406478-67406497 | None:intergenic | 55.0% | |
| GCAGCCAAGGAAATCGAAGC+CGG | - | chr5_4:67406479-67406498 | None:intergenic | 55.0% | |
| TCTCACCGGGGTGAACATCT+GGG | - | chr5_4:67406543-67406562 | None:intergenic | 55.0% | |
| ATCTCACCGGGGTGAACATC+TGG | - | chr5_4:67406544-67406563 | None:intergenic | 55.0% | |
| !! | AACCCTCTTTGGAACTGCGC+TGG | + | chr5_4:67406616-67406635 | Msa0866010:CDS | 55.0% |
| ATGCTCCGCATTCGATCCGT+CGG | + | chr5_4:67406664-67406683 | Msa0866010:CDS | 55.0% | |
| TGTTGCCCCATCCATCATGG+GGG | + | chr5_4:67406867-67406886 | Msa0866010:CDS | 55.0% | |
| TGTGGCGTCAGTGTTACAGG+GGG | + | chr5_4:67407077-67407096 | Msa0866010:CDS | 55.0% | |
| !! | GCTTTTGGCTGCACCATCAG+TGG | + | chr5_4:67407210-67407229 | Msa0866010:CDS | 55.0% |
| AGTAGGACCAGCACCACTGA+TGG | - | chr5_4:67407226-67407245 | None:intergenic | 55.0% | |
| TCCTACTGCGGTTGCTGTCA+CGG | + | chr5_4:67407239-67407258 | Msa0866010:CDS | 55.0% | |
| GGTTGCTGTCACGGATAACG+AGG | + | chr5_4:67407248-67407267 | Msa0866010:CDS | 55.0% | |
| GTCAAGCAGCTTGATCGCCT+TGG | + | chr5_4:67407345-67407364 | Msa0866010:CDS | 55.0% | |
| TCGGTAAGTGTGACGACGGA+GGG | - | chr5_4:67406394-67406413 | None:intergenic | 55.0% | |
| TGGGTCGGTAAGTGTGACGA+CGG | - | chr5_4:67406398-67406417 | None:intergenic | 55.0% | |
| ATCGAAGCCGGGACCTAGAT+TGG | - | chr5_4:67406467-67406486 | None:intergenic | 55.0% | |
| CAGCCAAGGAAATCGAAGCC+GGG | - | chr5_4:67406478-67406497 | None:intergenic | 55.0% | |
| GCAGCCAAGGAAATCGAAGC+CGG | - | chr5_4:67406479-67406498 | None:intergenic | 55.0% | |
| TCTCACCGGGGTGAACATCT+GGG | - | chr5_4:67406543-67406562 | None:intergenic | 55.0% | |
| ATCTCACCGGGGTGAACATC+TGG | - | chr5_4:67406544-67406563 | None:intergenic | 55.0% | |
| !! | AACCCTCTTTGGAACTGCGC+TGG | + | chr5_4:67406616-67406635 | Msa0866010:CDS | 55.0% |
| ATGCTCCGCATTCGATCCGT+CGG | + | chr5_4:67406664-67406683 | Msa0866010:CDS | 55.0% | |
| TGTTGCCCCATCCATCATGG+GGG | + | chr5_4:67406867-67406886 | Msa0866010:CDS | 55.0% | |
| TGTGGCGTCAGTGTTACAGG+GGG | + | chr5_4:67407077-67407096 | Msa0866010:CDS | 55.0% | |
| !! | GCTTTTGGCTGCACCATCAG+TGG | + | chr5_4:67407210-67407229 | Msa0866010:CDS | 55.0% |
| AGTAGGACCAGCACCACTGA+TGG | - | chr5_4:67407226-67407245 | None:intergenic | 55.0% | |
| TCCTACTGCGGTTGCTGTCA+CGG | + | chr5_4:67407239-67407258 | Msa0866010:CDS | 55.0% | |
| GGTTGCTGTCACGGATAACG+AGG | + | chr5_4:67407248-67407267 | Msa0866010:CDS | 55.0% | |
| GTCAAGCAGCTTGATCGCCT+TGG | + | chr5_4:67407345-67407364 | Msa0866010:CDS | 55.0% | |
| GACGGAGGGATGCTTCTGAG+AGG | - | chr5_4:67406380-67406399 | None:intergenic | 60.0% | |
| GTCGGTAAGTGTGACGACGG+AGG | - | chr5_4:67406395-67406414 | None:intergenic | 60.0% | |
| GGCAGGAGCAAAGGCCTTGA+CGG | - | chr5_4:67406437-67406456 | None:intergenic | 60.0% | |
| ACCGTCGCCAATCTAGGTCC+CGG | + | chr5_4:67406457-67406476 | Msa0866010:CDS | 60.0% | |
| GGTCCCGGCTTCGATTTCCT+TGG | + | chr5_4:67406472-67406491 | Msa0866010:CDS | 60.0% | |
| TTCCTTGGCTGCGCTGTCGA+TGG | + | chr5_4:67406487-67406506 | Msa0866010:CDS | 60.0% | |
| GTGGACCCAGATGTTCACCC+CGG | + | chr5_4:67406535-67406554 | Msa0866010:CDS | 60.0% | |
| GTTGCCCCATCCATCATGGG+GGG | + | chr5_4:67406868-67406887 | Msa0866010:CDS | 60.0% | |
| TAGGGATGCCGCACCATGTC+TGG | + | chr5_4:67407031-67407050 | Msa0866010:CDS | 60.0% | |
| TAGCCAGGCAGCTGCTCTTG+TGG | + | chr5_4:67407059-67407078 | Msa0866010:CDS | 60.0% | |
| !! | CAGTGGTGCTGGTCCTACTG+CGG | + | chr5_4:67407227-67407246 | Msa0866010:CDS | 60.0% |
| TCCGTGACAGCAACCGCAGT+AGG | - | chr5_4:67407243-67407262 | None:intergenic | 60.0% | |
| GACGGAGGGATGCTTCTGAG+AGG | - | chr5_4:67406380-67406399 | None:intergenic | 60.0% | |
| GTCGGTAAGTGTGACGACGG+AGG | - | chr5_4:67406395-67406414 | None:intergenic | 60.0% | |
| GGCAGGAGCAAAGGCCTTGA+CGG | - | chr5_4:67406437-67406456 | None:intergenic | 60.0% | |
| ACCGTCGCCAATCTAGGTCC+CGG | + | chr5_4:67406457-67406476 | Msa0866010:CDS | 60.0% | |
| GGTCCCGGCTTCGATTTCCT+TGG | + | chr5_4:67406472-67406491 | Msa0866010:CDS | 60.0% | |
| TTCCTTGGCTGCGCTGTCGA+TGG | + | chr5_4:67406487-67406506 | Msa0866010:CDS | 60.0% | |
| GTGGACCCAGATGTTCACCC+CGG | + | chr5_4:67406535-67406554 | Msa0866010:CDS | 60.0% | |
| GTTGCCCCATCCATCATGGG+GGG | + | chr5_4:67406868-67406887 | Msa0866010:CDS | 60.0% | |
| TAGGGATGCCGCACCATGTC+TGG | + | chr5_4:67407031-67407050 | Msa0866010:CDS | 60.0% | |
| TAGCCAGGCAGCTGCTCTTG+TGG | + | chr5_4:67407059-67407078 | Msa0866010:CDS | 60.0% | |
| !! | CAGTGGTGCTGGTCCTACTG+CGG | + | chr5_4:67407227-67407246 | Msa0866010:CDS | 60.0% |
| TCCGTGACAGCAACCGCAGT+AGG | - | chr5_4:67407243-67407262 | None:intergenic | 60.0% | |
| CCTAGATTGGCGACGGTGGC+AGG | - | chr5_4:67406454-67406473 | None:intergenic | 65.0% | |
| CCTGCCACCGTCGCCAATCT+AGG | + | chr5_4:67406451-67406470 | Msa0866010:CDS | 65.0% | |
| GGGACCTAGATTGGCGACGG+TGG | - | chr5_4:67406458-67406477 | None:intergenic | 65.0% | |
| GCCGGGACCTAGATTGGCGA+CGG | - | chr5_4:67406461-67406480 | None:intergenic | 65.0% | |
| TGCCATCGACAGCGCAGCCA+AGG | - | chr5_4:67406492-67406511 | None:intergenic | 65.0% | |
| GGCTGCGCTGTCGATGGCAT+CGG | + | chr5_4:67406493-67406512 | Msa0866010:CDS | 65.0% | |
| ACGCCACAAGAGCAGCTGCC+TGG | - | chr5_4:67407065-67407084 | None:intergenic | 65.0% | |
| GGCTGCACCATCAGTGGTGC+TGG | + | chr5_4:67407216-67407235 | Msa0866010:CDS | 65.0% | |
| CCTAGATTGGCGACGGTGGC+AGG | - | chr5_4:67406454-67406473 | None:intergenic | 65.0% | |
| CCTGCCACCGTCGCCAATCT+AGG | + | chr5_4:67406451-67406470 | Msa0866010:CDS | 65.0% | |
| GGGACCTAGATTGGCGACGG+TGG | - | chr5_4:67406458-67406477 | None:intergenic | 65.0% | |
| GCCGGGACCTAGATTGGCGA+CGG | - | chr5_4:67406461-67406480 | None:intergenic | 65.0% | |
| TGCCATCGACAGCGCAGCCA+AGG | - | chr5_4:67406492-67406511 | None:intergenic | 65.0% | |
| GGCTGCGCTGTCGATGGCAT+CGG | + | chr5_4:67406493-67406512 | Msa0866010:CDS | 65.0% | |
| ACGCCACAAGAGCAGCTGCC+TGG | - | chr5_4:67407065-67407084 | None:intergenic | 65.0% | |
| GGCTGCACCATCAGTGGTGC+TGG | + | chr5_4:67407216-67407235 | Msa0866010:CDS | 65.0% | |
| GGCGACGGTGGCAGGAGCAA+AGG | - | chr5_4:67406446-67406465 | None:intergenic | 70.0% | |
| GACAGCAACCGCGGCTGCAG+CGG | - | chr5_4:67406755-67406774 | None:intergenic | 70.0% | |
| GGCGACGGTGGCAGGAGCAA+AGG | - | chr5_4:67406446-67406465 | None:intergenic | 70.0% | |
| GACAGCAACCGCGGCTGCAG+CGG | - | chr5_4:67406755-67406774 | None:intergenic | 70.0% | |
| !! | TGCAGCGGCGCTGGCAGCAC+TGG | - | chr5_4:67406740-67406759 | None:intergenic | 75.0% |
| !! | TGCAGCGGCGCTGGCAGCAC+TGG | - | chr5_4:67406740-67406759 | None:intergenic | 75.0% |
| ! | TGCCAGCGCCGCTGCAGCCG+CGG | + | chr5_4:67406744-67406763 | Msa0866010:CDS | 80.0% |
| ! | AACCGCGGCTGCAGCGGCGC+TGG | - | chr5_4:67406749-67406768 | None:intergenic | 80.0% |
| ! | TGCCAGCGCCGCTGCAGCCG+CGG | + | chr5_4:67406744-67406763 | Msa0866010:CDS | 80.0% |
| ! | AACCGCGGCTGCAGCGGCGC+TGG | - | chr5_4:67406749-67406768 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 67406262 | 67407401 | 67406262 | ID=Msa0866010;Name=Msa0866010 |
| chr5_4 | mRNA | 67406262 | 67407401 | 67406262 | ID=Msa0866010-mRNA-1;Parent=Msa0866010;Name=Msa0866010-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|379 |
| chr5_4 | exon | 67406262 | 67407401 | 67406262 | ID=Msa0866010-mRNA-1:exon:21264;Parent=Msa0866010-mRNA-1 |
| chr5_4 | CDS | 67406262 | 67407401 | 67406262 | ID=Msa0866010-mRNA-1:cds;Parent=Msa0866010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
