AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0376750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376750 MtrunA17_Chr3g0127171 95.035 705 32 1 1 705 1 702 0.0 1351
Msa0376750 MtrunA17_Chr1g0146771 61.433 726 238 15 1 703 1 707 0.0 836
Msa0376750 MtrunA17_Chr8g0388841 43.370 724 363 15 11 705 9 714 0.0 546
Msa0376750 MtrunA17_Chr8g0384061 38.152 671 328 16 46 703 47 643 1.46e-126 390
Msa0376750 MtrunA17_Chr2g0317931 42.468 551 251 13 198 705 331 858 7.99e-125 392
Msa0376750 MtrunA17_Chr7g0238321 46.565 393 193 6 206 588 381 766 3.73e-93 310
Msa0376750 MtrunA17_Chr4g0067151 29.075 227 145 9 343 562 66 283 1.69e-19 90.5
Msa0376750 MtrunA17_Chr4g0067151 27.350 234 140 9 243 464 19 234 9.47e-13 70.1
Msa0376750 MtrunA17_Chr1g0185501 25.833 240 158 8 330 562 48 274 1.06e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376750 AT5G24320.1 46.879 721 319 16 11 705 12 694 0.0 592
Msa0376750 AT5G24320.2 46.897 725 317 17 11 705 12 698 0.0 591
Msa0376750 AT5G53500.2 47.280 717 299 16 1 703 1 652 0.0 580
Msa0376750 AT5G53500.1 47.280 717 299 16 1 703 1 652 0.0 580
Msa0376750 AT5G42010.1 48.496 532 240 13 191 705 195 709 4.45e-163 486
Msa0376750 AT1G64610.2 49.432 528 217 14 189 705 159 647 1.27e-158 473
Msa0376750 AT1G64610.1 49.432 528 217 14 189 705 159 647 1.27e-158 473
Msa0376750 AT5G42010.2 54.118 340 151 4 191 525 195 534 2.59e-125 384
Msa0376750 AT5G54200.1 45.040 504 237 12 224 703 336 823 6.55e-123 386
Msa0376750 AT3G15470.1 42.270 511 253 11 224 705 386 883 3.35e-118 375
Msa0376750 AT1G48870.2 40.612 490 226 11 216 702 163 590 2.19e-103 328
Msa0376750 AT1G48870.3 40.612 490 226 11 216 702 163 590 2.19e-103 328
Msa0376750 AT1G48870.1 40.612 490 226 11 216 702 163 590 2.19e-103 328
Msa0376750 AT5G02430.1 39.692 519 266 13 224 702 384 895 6.95e-95 314
Msa0376750 AT2G37670.2 39.847 522 262 13 226 702 380 894 1.65e-92 308
Msa0376750 AT2G37670.1 39.847 522 262 13 226 702 379 893 1.66e-92 307
Msa0376750 AT3G49660.1 23.692 325 175 13 245 562 18 276 8.23e-18 85.5
Msa0376750 AT4G02730.1 29.224 219 138 10 348 558 78 287 4.49e-17 83.6
Msa0376750 AT2G16405.1 25.214 234 159 4 343 560 202 435 2.19e-14 76.6
Msa0376750 AT5G67320.1 24.691 243 142 9 243 449 357 594 1.49e-11 68.2

Find 232 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGACACCATTGTTTA+TGG 0.074372 3_1:+76987430 Msa0376750:CDS
ACTACATGCTACAAAGTTTA+TGG 0.160182 3_1:+76989540 Msa0376750:three_prime_UTR
GATTCCCAACTATGCTTAAT+TGG 0.172014 3_1:+76988525 Msa0376750:CDS
CAGAGGGATAACTGGCTTTC+AGG 0.188767 3_1:+76988566 Msa0376750:CDS
ATGCTTGAGGGGTCAATTTC+AGG 0.194762 3_1:-76987383 None:intergenic
CTTTCATCTTAGCAACTAAA+AGG 0.214674 3_1:-76990052 None:intergenic
CTTGAGAATGATGTTAAATT+TGG 0.227107 3_1:+76989756 Msa0376750:three_prime_UTR
AAGAGGATGTTGTGTCTATT+AGG 0.227175 3_1:+76986556 Msa0376750:CDS
GAGGAGAAGCTTCCTGTTTC+GGG 0.230139 3_1:+76989271 Msa0376750:CDS
CGAGGAGAAGCTTCCTGTTT+CGG 0.236200 3_1:+76989270 Msa0376750:CDS
GTACAGGTAGCCCGTAATTT+TGG 0.245270 3_1:-76989432 None:intergenic
TTGATCTTAAAGTCGTAATT+AGG 0.253204 3_1:+76989906 Msa0376750:three_prime_UTR
GCCATCTCAAGATGGAAATT+TGG 0.253348 3_1:+76986890 Msa0376750:CDS
ACATGTAACCATAACTTTCT+TGG 0.275795 3_1:-76988702 None:intergenic
TGGTTACTAGAACGGTAAAT+AGG 0.280748 3_1:+76987060 Msa0376750:CDS
AGAGTGTGTGTTTGAAAATT+AGG 0.282450 3_1:-76985966 None:intergenic
CCTAACTTTCTTAGATTTCA+TGG 0.283800 3_1:-76989041 None:intergenic
GAGAAAGAAGCAGGTGGGTT+GGG 0.287380 3_1:-76989193 None:intergenic
TCCAACAACCGGAAGATCTT+AGG 0.295299 3_1:-76987521 None:intergenic
GATCACATGGATGGCAAAAT+TGG 0.299956 3_1:-76990150 None:intergenic
GAATCCTGGTCCAAAGTTTA+TGG 0.301176 3_1:+76989730 Msa0376750:three_prime_UTR
GATGCGCACCTTTCCGTCTA+TGG 0.305937 3_1:-76987963 None:intergenic
AAATGATCCTGCGATTGATT+TGG 0.309802 3_1:-76989619 None:intergenic
GTGAGTTCTTCGGAGGAATT+TGG 0.313989 3_1:+76986846 Msa0376750:CDS
CTACGCTCTCTCACACTCTT+TGG 0.324124 3_1:-76986663 None:intergenic
GATGAAGATTATTTCATTAG+TGG 0.325769 3_1:+76987938 Msa0376750:CDS
TTAAAGTCGTAATTAGGTTT+TGG 0.326674 3_1:+76989912 Msa0376750:three_prime_UTR
GGGATTGTTGGATCTTTAGA+AGG 0.327630 3_1:+76988163 Msa0376750:CDS
GTGGTGAAGATGGGGTTGTT+CGG 0.332946 3_1:+76987315 Msa0376750:CDS
ATCAAGATTCATTGCTTTGT+TGG 0.334144 3_1:+76989498 Msa0376750:three_prime_UTR
GACACCATTGTTTATGGATA+AGG 0.339226 3_1:+76987436 Msa0376750:CDS
CTTCCTGGCAGAGGGATAAC+TGG 0.340161 3_1:+76988558 Msa0376750:CDS
ATGTGTAGTTGTTTATGATC+TGG 0.346562 3_1:+76986383 Msa0376750:intron
TTGTTGTAATGTAATGTAAA+TGG 0.346787 3_1:+76989866 Msa0376750:three_prime_UTR
TGGTGAAGATGGGGTTGTTC+GGG 0.350996 3_1:+76987316 Msa0376750:CDS
GTTGTACCTCAACTAATTAA+AGG 0.353244 3_1:-76990409 None:intergenic
ATTGATAGATAGAGAGTTTG+AGG 0.355153 3_1:+76987022 Msa0376750:CDS
TTCGGAGGAATTTGGTTTAG+TGG 0.361491 3_1:+76986854 Msa0376750:CDS
AGGACTCTAATGTATATCTA+TGG 0.364797 3_1:+76988990 Msa0376750:CDS
TAGTCCTGATGGGCAGTATC+TGG 0.368035 3_1:+76987286 Msa0376750:CDS
GAGGATTGTGTAAATGTCTC+TGG 0.370035 3_1:+76986981 Msa0376750:CDS
TATGTAAGTGTATATATATA+TGG 0.372070 3_1:-76985858 None:intergenic
TATCATGCGGTAATCAATTT+CGG 0.373903 3_1:-76989694 None:intergenic
TGGGCATAGAAGTGAAGTTT+TGG 0.376344 3_1:+76987565 Msa0376750:CDS
TGTGTAGTTGTTTATGATCT+GGG 0.377214 3_1:+76986384 Msa0376750:intron
TAGACGGAAAGGTGCGCATC+TGG 0.381026 3_1:+76987966 Msa0376750:CDS
CCGATTCTCAGGTTGTTGAT+TGG 0.381470 3_1:+76987996 Msa0376750:CDS
GCCTAAGATCTTCCGGTTGT+TGG 0.381485 3_1:+76987520 Msa0376750:CDS
CCATGAAATCTAAGAAAGTT+AGG 0.382192 3_1:+76989041 Msa0376750:CDS
GAAGGGAGCTATGCAGTCTC+AGG 0.387775 3_1:+76987146 Msa0376750:CDS
CTTGTGGCCATTTGTACAAA+AGG 0.391331 3_1:+76990172 Msa0376750:three_prime_UTR
ATGAAATAATCTTCATCAAC+AGG 0.393624 3_1:-76987932 None:intergenic
CTGACAAAACTGTCCGACTA+TGG 0.394030 3_1:+76987726 Msa0376750:CDS
GTTGATAATGATAGAGAAGA+AGG 0.394764 3_1:+76987128 Msa0376750:CDS
TTGCTCTAGTGTGAGTTCTT+CGG 0.402105 3_1:+76986836 Msa0376750:CDS
AGAAAGAAGCAGGTGGGTTG+GGG 0.408797 3_1:-76989192 None:intergenic
TCAAGATTCCAAGAAAGTTA+TGG 0.411964 3_1:+76988694 Msa0376750:CDS
CTGGCTACAGGTGGTGAAGA+TGG 0.415140 3_1:+76987305 Msa0376750:CDS
TCCTGCGATTGATTTGGAAT+TGG 0.416200 3_1:-76989613 None:intergenic
TTGATTATGAAGTGTGGATT+CGG 0.416684 3_1:+76986637 Msa0376750:CDS
ATGTTAAATTTGGCAGCATA+AGG 0.417388 3_1:+76989766 Msa0376750:three_prime_UTR
TTGGTCTTGGAGCCCGAAAC+AGG 0.417453 3_1:-76989283 None:intergenic
GCGGTCTTTCTCATGCTCTT+CGG 0.420033 3_1:-76987473 None:intergenic
AAGTCACACTTCATTTCAAA+CGG 0.422322 3_1:-76989455 None:intergenic
GGTTACTAGAACGGTAAATA+GGG 0.425943 3_1:+76987061 Msa0376750:CDS
AGTGGCTCGAAGTCTTTGTT+TGG 0.426122 3_1:+76990303 Msa0376750:three_prime_UTR
TTCCAAAGGGATCTGCAACC+TGG 0.426271 3_1:+76989245 Msa0376750:CDS
ATATCTATGGAACGTTAATC+AGG 0.429417 3_1:+76989003 Msa0376750:CDS
GGCCAGGTTGCAGATCCCTT+TGG 0.430320 3_1:-76989247 None:intergenic
ACCCCACGCATGAGCATTGT+TGG 0.432490 3_1:-76989365 None:intergenic
TTTACCAATTAAGCATAGTT+GGG 0.432871 3_1:-76988529 None:intergenic
TCTCAAGCCTCCATAAACTT+TGG 0.434188 3_1:-76989740 None:intergenic
TTCTATTTCTCTCAACCAAA+AGG 0.435095 3_1:-76990506 None:intergenic
CTGGACGATACCCGATTCTC+AGG 0.435686 3_1:+76987985 Msa0376750:CDS
CCCATCAGGACTAAATTTCA+TGG 0.436002 3_1:-76987276 None:intergenic
TTAAATAATACCTGCCCATC+CGG 0.437117 3_1:-76988058 None:intergenic
CCGCATGATATTTGAAGTGC+AGG 0.437193 3_1:+76989707 Msa0376750:three_prime_UTR
CCAATCAACAACCTGAGAAT+CGG 0.440688 3_1:-76987996 None:intergenic
ATTTGAAGTGCAGGGAATCC+TGG 0.454134 3_1:+76989716 Msa0376750:three_prime_UTR
GTATAACAGGGAGGGATTGT+TGG 0.454570 3_1:+76988151 Msa0376750:intron
TGGTCATTGTGACTGCAGGC+TGG 0.456531 3_1:+76989389 Msa0376750:CDS
AAATTGCACCTTCATGCGCT+TGG 0.462786 3_1:-76987250 None:intergenic
TTTCATCTTAGCAACTAAAA+GGG 0.466148 3_1:-76990051 None:intergenic
ACCATGAAATTTAGTCCTGA+TGG 0.466588 3_1:+76987275 Msa0376750:CDS
TCGGGTGTGGCAAGTGGTTG+AGG 0.469415 3_1:+76987334 Msa0376750:CDS
TACCGCAACTGATGCGTTTG+AGG 0.470561 3_1:-76989080 None:intergenic
CAATGCTCATGCGTGGGGTA+TGG 0.470834 3_1:+76989369 Msa0376750:CDS
CTAACTTTCTTAGATTTCAT+GGG 0.472148 3_1:-76989040 None:intergenic
TAGGGGCCAGTAGATTCTTG+TGG 0.472471 3_1:-76989936 None:intergenic
GATCTTTAGAAGGAAATTGT+TGG 0.473234 3_1:+76988173 Msa0376750:CDS
TGGCTACAGGTGGTGAAGAT+GGG 0.475427 3_1:+76987306 Msa0376750:CDS
GTAGCCAGATACTGCCCATC+AGG 0.476689 3_1:-76987290 None:intergenic
TCACAAGTCAGAATCCTTGA+TGG 0.477119 3_1:+76988731 Msa0376750:CDS
AGGATTGTGTAAATGTCTCT+GGG 0.480040 3_1:+76986982 Msa0376750:CDS
ACATTGGACTGCCTGTGTTA+AGG 0.480580 3_1:-76988922 None:intergenic
TTGTGACTGCAGGCTGGGAC+GGG 0.481187 3_1:+76989395 Msa0376750:CDS
AGAGGATGTTGTGTCTATTA+GGG 0.481348 3_1:+76986557 Msa0376750:CDS
AAGATGGGGTTGTTCGGGTG+TGG 0.485043 3_1:+76987321 Msa0376750:CDS
GATGGGCAGTATCTGGCTAC+AGG 0.486225 3_1:+76987293 Msa0376750:CDS
TTGTACAAAAGGGTTAAACT+TGG 0.488189 3_1:+76990183 Msa0376750:three_prime_UTR
AGGAAGCTTCTCCTCGGGCC+AGG 0.488808 3_1:-76989263 None:intergenic
AACGGTAAATAGGGCGAGAA+GGG 0.489976 3_1:+76987070 Msa0376750:CDS
ATTGTGACTGCAGGCTGGGA+CGG 0.490386 3_1:+76989394 Msa0376750:CDS
CAATCAACAACCTGAGAATC+GGG 0.492398 3_1:-76987995 None:intergenic
AAATCAGTTGGTAGTTGCTA+AGG 0.492824 3_1:+76986953 Msa0376750:CDS
AGAGAAAGAAGCAGGTGGGT+TGG 0.493090 3_1:-76989194 None:intergenic
ATGTAAGTGTATATATATAT+GGG 0.493647 3_1:-76985857 None:intergenic
CATGATCAATCAAAATGCTA+AGG 0.496976 3_1:+76990110 Msa0376750:three_prime_UTR
ACTTCATTTCAAACGGGTAC+AGG 0.498608 3_1:-76989448 None:intergenic
ACCAGATAATCACTTGCAGC+TGG 0.500109 3_1:+76988503 Msa0376750:intron
CAACTAATTAAAGGCGATGT+TGG 0.502658 3_1:-76990400 None:intergenic
GAAACAGGAAGCTTCTCCTC+GGG 0.503691 3_1:-76989268 None:intergenic
CGAAACAGGAAGCTTCTCCT+CGG 0.504206 3_1:-76989269 None:intergenic
AGTCACACTTCATTTCAAAC+GGG 0.505736 3_1:-76989454 None:intergenic
TCCAAATTTCCATCTTGAGA+TGG 0.506574 3_1:-76986891 None:intergenic
AAAGAGTGTGAGAGAGCGTA+GGG 0.507140 3_1:+76986665 Msa0376750:CDS
ACTGTAAAGTAAATGCTTGA+GGG 0.510241 3_1:-76987395 None:intergenic
AACATCATTGCTGCGAAAGT+CGG 0.511514 3_1:+76989309 Msa0376750:CDS
TTACAAATTTACATCAAATG+AGG 0.512209 3_1:-76990445 None:intergenic
AGTGAATCGTGACCATTGCT+TGG 0.512373 3_1:+76987751 Msa0376750:CDS
ATAAGGTAACAAGCAATTTG+AGG 0.514159 3_1:+76989783 Msa0376750:three_prime_UTR
ACGCATCAGTTGCGGTACCT+TGG 0.514857 3_1:+76989086 Msa0376750:CDS
GAAATTTGGAGAAAAGAATG+AGG 0.519213 3_1:+76986904 Msa0376750:CDS
TTCATTAGTGGATCCATAGA+CGG 0.522706 3_1:+76987950 Msa0376750:CDS
AACTTTCATCGCTTTACTTG+AGG 0.524102 3_1:+76987219 Msa0376750:CDS
ATGTTATCGACCGGATGGGC+AGG 0.526250 3_1:+76988048 Msa0376750:CDS
AATCATATGGGTAGTTTCAG+TGG 0.527946 3_1:+76986504 Msa0376750:exon
TTGATAATGATAGAGAAGAA+GGG 0.528008 3_1:+76987129 Msa0376750:CDS
TTGTGGCCATTTGTACAAAA+GGG 0.529199 3_1:+76990173 Msa0376750:three_prime_UTR
TCAGTGGAGAAGAAGATTGT+CGG 0.529362 3_1:+76986520 Msa0376750:CDS
GGGGAGGTTTATGAAGAGCA+TGG 0.530487 3_1:+76986686 Msa0376750:CDS
TAAATAGGGCGAGAAGGGGT+TGG 0.531097 3_1:+76987075 Msa0376750:CDS
AGATAGTAGTGGTTCTGAAG+AGG 0.531135 3_1:+76986782 Msa0376750:CDS
TTTGGTCCACAAGAATCTAC+TGG 0.536692 3_1:+76989930 Msa0376750:three_prime_UTR
CACTGTAAAGTAAATGCTTG+AGG 0.537714 3_1:-76987396 None:intergenic
GCTATGCAGTCTCAGGGTGT+AGG 0.538360 3_1:+76987153 Msa0376750:CDS
GTCATTGATTTGAGATCGAA+CGG 0.538995 3_1:-76989672 None:intergenic
ATAACTTTCTTGGAATCTTG+AGG 0.539357 3_1:-76988692 None:intergenic
AAATCACATTAAGCCCATCA+AGG 0.539545 3_1:-76988745 None:intergenic
GACTGCAGTATGTTATCGAC+CGG 0.543308 3_1:+76988039 Msa0376750:CDS
AGAGAGTTTGAGGATGCAGA+TGG 0.543559 3_1:+76987032 Msa0376750:CDS
TCTGGGGTGTCTCATTGTCA+AGG 0.544039 3_1:+76986999 Msa0376750:CDS
TTGATATGTTGTGGGACCAT+GGG 0.546377 3_1:+76990017 Msa0376750:three_prime_UTR
ACAAGCAATGTGATTATGAT+CGG 0.546669 3_1:+76990276 Msa0376750:three_prime_UTR
AAGTAAAGGTCCGTCAATGT+AGG 0.547509 3_1:+76987183 Msa0376750:CDS
TGTGCATCATTTACCTCAGA+CGG 0.548187 3_1:+76988944 Msa0376750:CDS
GGTATGGTCATTGTGACTGC+AGG 0.549386 3_1:+76989385 Msa0376750:CDS
GCCTCCATAAACTTTGGACC+AGG 0.549976 3_1:-76989734 None:intergenic
ATGATCAATCAAAATGCTAA+GGG 0.550174 3_1:+76990111 Msa0376750:three_prime_UTR
CCATGAAATTTAGTCCTGAT+GGG 0.550381 3_1:+76987276 Msa0376750:CDS
TGGTTCAGAGAGAAAGAAGC+AGG 0.550963 3_1:-76989202 None:intergenic
TTCCTCAAACGCATCAGTTG+CGG 0.553600 3_1:+76989078 Msa0376750:CDS
GATCAAGACAAGCTAAAGCT+TGG 0.556012 3_1:-76989889 None:intergenic
TCCAATTCCAAATCAATCGC+AGG 0.556225 3_1:+76989612 Msa0376750:three_prime_UTR
GGTCATTGTGACTGCAGGCT+GGG 0.557152 3_1:+76989390 Msa0376750:CDS
GTGGAGATTTCAAGAGTTGG+TGG 0.560027 3_1:+76990075 Msa0376750:three_prime_UTR
CACAAGTCAGAATCCTTGAT+GGG 0.560457 3_1:+76988732 Msa0376750:CDS
GAGTGATTGTTCAAATCAGT+TGG 0.560983 3_1:+76986941 Msa0376750:CDS
TAAAATATGTTTCCCGTCTG+AGG 0.561223 3_1:-76988957 None:intergenic
TACCAACAATGCTCATGCGT+GGG 0.562604 3_1:+76989363 Msa0376750:CDS
GGTTGTTCGGGTGTGGCAAG+TGG 0.564414 3_1:+76987328 Msa0376750:CDS
ACATCGCCTTTAATTAGTTG+AGG 0.564647 3_1:+76990403 Msa0376750:three_prime_UTR
GCAGTATGTTATCGACCGGA+TGG 0.565468 3_1:+76988043 Msa0376750:CDS
CAAAGAGTGTGAGAGAGCGT+AGG 0.568692 3_1:+76986664 Msa0376750:CDS
TTGCCATCCATGTGATCTTG+TGG 0.572237 3_1:+76990156 Msa0376750:three_prime_UTR
CACGATTCACTTGCCATAGT+CGG 0.575462 3_1:-76987739 None:intergenic
AACCATTGCATGAGTTCCGT+GGG 0.575505 3_1:+76987546 Msa0376750:CDS
GAACGGTAAATAGGGCGAGA+AGG 0.577669 3_1:+76987069 Msa0376750:CDS
AAGGTGGAGATTTCAAGAGT+TGG 0.578139 3_1:+76990072 Msa0376750:three_prime_UTR
GCAAGAAAATCAGATTATTG+AGG 0.578747 3_1:+76989818 Msa0376750:three_prime_UTR
AAAAGAAACTTCCTGGCAGA+GGG 0.579638 3_1:+76988550 Msa0376750:CDS
TTAGTTGCTAAGATGAAAGG+TGG 0.581942 3_1:+76990056 Msa0376750:three_prime_UTR
CAAATGGCCACAAGATCACA+TGG 0.582600 3_1:-76990163 None:intergenic
GGGAGGTTTATGAAGAGCAT+GGG 0.583225 3_1:+76986687 Msa0376750:CDS
CTCTAGTGTGAGTTCTTCGG+AGG 0.585376 3_1:+76986839 Msa0376750:CDS
AAGCCAGTTATCCCTCTGCC+AGG 0.589263 3_1:-76988561 None:intergenic
AAACCATTGCATGAGTTCCG+TGG 0.589350 3_1:+76987545 Msa0376750:CDS
GGCTACAGGTGGTGAAGATG+GGG 0.590519 3_1:+76987307 Msa0376750:CDS
TAGTTGAGGTACAACTATGT+TGG 0.590934 3_1:+76990417 Msa0376750:three_prime_UTR
GTTGTTGATGACGAAAGAGG+AGG 0.591914 3_1:-76985935 None:intergenic
CAAGATATCCAAGCGCATGA+AGG 0.592474 3_1:+76987242 Msa0376750:CDS
CTGTAAAGTAAATGCTTGAG+GGG 0.592786 3_1:-76987394 None:intergenic
GAAAGAAGAAGAGATAGTAG+TGG 0.594074 3_1:+76986771 Msa0376750:CDS
TGGTGATGTGGTTACTAGAA+CGG 0.595840 3_1:+76987052 Msa0376750:CDS
AATAACTTGCCATCTCAAGA+TGG 0.595950 3_1:+76986882 Msa0376750:CDS
GGTAGTTGCTAAGGAATCTG+AGG 0.598779 3_1:+76986962 Msa0376750:CDS
GGAGGTTTCAAACCGTGCCA+AGG 0.598891 3_1:-76989103 None:intergenic
AAACTTCACTTCTATGCCCA+CGG 0.602774 3_1:-76987562 None:intergenic
GTGTAGGCTTCAGAAAGTAA+AGG 0.602811 3_1:+76987169 Msa0376750:CDS
GTGCATCATTTACCTCAGAC+GGG 0.603220 3_1:+76988945 Msa0376750:CDS
GAGGTAAATGATGCACACAT+TGG 0.603566 3_1:-76988938 None:intergenic
TAGTGGATCCATAGACGGAA+AGG 0.604269 3_1:+76987955 Msa0376750:CDS
TTTGATATGTTGTGGGACCA+TGG 0.605088 3_1:+76990016 Msa0376750:three_prime_UTR
TAACTTTCTTAGATTTCATG+GGG 0.605262 3_1:-76989039 None:intergenic
AAGAGGAATTTAGTTCATGT+CGG 0.608009 3_1:+76986799 Msa0376750:CDS
AGTGTTGTTGATGACGAAAG+AGG 0.608136 3_1:-76985938 None:intergenic
ACACTAGAGCAACAAGACAT+TGG 0.610944 3_1:-76986825 None:intergenic
GTGAAAACACTTCCAAGCAA+TGG 0.611173 3_1:-76987763 None:intergenic
TGCCCACGGAACTCATGCAA+TGG 0.612153 3_1:-76987548 None:intergenic
AAATTTGGAGAAAAGAATGA+GGG 0.614888 3_1:+76986905 Msa0376750:CDS
AGAGTGTGAGAGAGCGTAGG+GGG 0.617428 3_1:+76986667 Msa0376750:CDS
CAGTATGTTATCGACCGGAT+GGG 0.618616 3_1:+76988044 Msa0376750:CDS
CGCATGATATTTGAAGTGCA+GGG 0.625837 3_1:+76989708 Msa0376750:three_prime_UTR
TGGCCACAAGATCACATGGA+TGG 0.626291 3_1:-76990159 None:intergenic
TCAGTTGCGGTACCTTGGCA+CGG 0.626640 3_1:+76989091 Msa0376750:CDS
TTCAGAGAGAAAGAAGCAGG+TGG 0.627337 3_1:-76989199 None:intergenic
ACAACCGGAAGATCTTAGGC+GGG 0.627533 3_1:-76987517 None:intergenic
TCCTGGTCCAAAGTTTATGG+AGG 0.631110 3_1:+76989733 Msa0376750:three_prime_UTR
AACAACACAAGCTGAATCTG+CGG 0.632119 3_1:-76987492 None:intergenic
TCAATGTAGGAAGAAAATGA+AGG 0.633828 3_1:+76987196 Msa0376750:CDS
GTACCAACAATGCTCATGCG+TGG 0.637345 3_1:+76989362 Msa0376750:CDS
GGGTTAAACTTGGAAATGTG+TGG 0.640914 3_1:+76990193 Msa0376750:three_prime_UTR
TCAGAGAGAAAGAAGCAGGT+GGG 0.641323 3_1:-76989198 None:intergenic
TGAGGATGCAGATGGTGATG+TGG 0.643720 3_1:+76987040 Msa0376750:CDS
AACAACCGGAAGATCTTAGG+CGG 0.646128 3_1:-76987518 None:intergenic
TCGAACGGTTCATATTGCAT+AGG 0.647522 3_1:-76989657 None:intergenic
GCGAAAACGATGATACAAAG+TGG 0.648362 3_1:-76985888 None:intergenic
AAGGGAGCTATGCAGTCTCA+GGG 0.648697 3_1:+76987147 Msa0376750:CDS
GGGATCTGCAACCTGGCCCG+AGG 0.648859 3_1:+76989252 Msa0376750:CDS
ACCAACAATGCTCATGCGTG+GGG 0.652027 3_1:+76989364 Msa0376750:CDS
TGTAATTGCATAACAACTTG+TGG 0.663052 3_1:-76989169 None:intergenic
TTATTGAGGTCAATGACAAG+TGG 0.665714 3_1:+76989832 Msa0376750:three_prime_UTR
GGTGTGGCAAGTGGTTGAGG+AGG 0.668449 3_1:+76987337 Msa0376750:CDS
ACGGTAAATAGGGCGAGAAG+GGG 0.672129 3_1:+76987071 Msa0376750:CDS
GTAGTTGTTTATGATCTGGG+TGG 0.672605 3_1:+76986387 Msa0376750:intron
AGAAAGTTAGGTCTTGTGAG+CGG 0.675224 3_1:+76989053 Msa0376750:CDS
TGTAAGTGTATATATATATG+GGG 0.692974 3_1:-76985856 None:intergenic
CCTGCACTTCAAATATCATG+CGG 0.697949 3_1:-76989707 None:intergenic
GGGCAGTATCTGGCTACAGG+TGG 0.702356 3_1:+76987296 Msa0376750:CDS
ATTGAGATCGATGACGTGCG+TGG 0.720656 3_1:+76987106 Msa0376750:CDS
AAGAGTGTGAGAGAGCGTAG+GGG 0.726141 3_1:+76986666 Msa0376750:CDS
GGATTGTGTAAATGTCTCTG+GGG 0.731454 3_1:+76986983 Msa0376750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTAAGTGTATATATATAT+GGG - chr3_1:76985860-76985879 None:intergenic 15.0%
!! TATGTAAGTGTATATATATA+TGG - chr3_1:76985861-76985880 None:intergenic 15.0%
!! GAAAATAAAAAAAACAAACA+CGG - chr3_1:76986127-76986146 None:intergenic 15.0%
!!! TTTATTATATTTGCTGATAT+TGG + chr3_1:76986338-76986357 Msa0376750:intron 15.0%
!! TTGAACTTAAAAAATCATAT+GGG + chr3_1:76986492-76986511 Msa0376750:exon 15.0%
!! AAAATAACTTAAATGGAATA+TGG - chr3_1:76988251-76988270 None:intergenic 15.0%
!!! GTTTTAATAATCAAAATGTT+AGG + chr3_1:76988309-76988328 Msa0376750:intron 15.0%
!! AAATGTTAATCAAGTTATAT+TGG + chr3_1:76988388-76988407 Msa0376750:intron 15.0%
!! AATGTTAATCAAGTTATATT+GGG + chr3_1:76988389-76988408 Msa0376750:intron 15.0%
!! ATAAAAACATTCCAAAATTA+CGG + chr3_1:76989421-76989440 Msa0376750:CDS 15.0%
!!! AAGTAATAGTAATATTTTGT+TGG + chr3_1:76990479-76990498 Msa0376750:three_prime_UTR 15.0%
!! TGTAAGTGTATATATATATG+GGG - chr3_1:76985859-76985878 None:intergenic 20.0%
!! GTTGAACTTAAAAAATCATA+TGG + chr3_1:76986491-76986510 Msa0376750:exon 20.0%
!!! AAATTCATTGTATTTTGAGA+AGG + chr3_1:76986737-76986756 Msa0376750:CDS 20.0%
!! GAATAATATGATGTATAACA+GGG + chr3_1:76988139-76988158 Msa0376750:intron 20.0%
!!! TGTTGGTTTTATAAAATATC+AGG + chr3_1:76988190-76988209 Msa0376750:CDS 20.0%
!!! ATAACTTGATTAACATTTTG+TGG - chr3_1:76988386-76988405 None:intergenic 20.0%
!!! AGAATACTATCTAAAATTTG+AGG - chr3_1:76988827-76988846 None:intergenic 20.0%
!!! GTTCATTACATTTTATTTTC+AGG + chr3_1:76988899-76988918 Msa0376750:intron 20.0%
!! TAAAAACATTCCAAAATTAC+GGG + chr3_1:76989422-76989441 Msa0376750:CDS 20.0%
!! TTGTTGTAATGTAATGTAAA+TGG + chr3_1:76989866-76989885 Msa0376750:three_prime_UTR 20.0%
!! TAACAAAAATATTCTGTACA+TGG + chr3_1:76990364-76990383 Msa0376750:three_prime_UTR 20.0%
!! TTACAAATTTACATCAAATG+AGG - chr3_1:76990448-76990467 None:intergenic 20.0%
!! AAAGGGTATGAATAAATTGT+TGG - chr3_1:76986062-76986081 None:intergenic 25.0%
!! TCTTCTTTTTATATCATACC+TGG + chr3_1:76986167-76986186 Msa0376750:intron 25.0%
! TATATCATACCTGGTTATTA+TGG + chr3_1:76986176-76986195 Msa0376750:intron 25.0%
! TTATTACTTTCTTTGTTCTG+TGG + chr3_1:76986270-76986289 Msa0376750:intron 25.0%
! TCGTTTGAAGAGATAAAAAT+TGG + chr3_1:76986412-76986431 Msa0376750:five_prime_UTR 25.0%
!!! TTAAGTTTTTGTTTCCTTGA+AGG + chr3_1:76986456-76986475 Msa0376750:five_prime_UTR 25.0%
!!! TAAGTTTTTGTTTCCTTGAA+GGG + chr3_1:76986457-76986476 Msa0376750:five_prime_UTR 25.0%
!! ATGATGATGATGATGATAAA+GGG + chr3_1:76986595-76986614 Msa0376750:CDS 25.0%
!!! TTGATTTTGATTATGAAGTG+TGG + chr3_1:76986631-76986650 Msa0376750:CDS 25.0%
!!! TTTTGAGAAGGAAAAGATTA+TGG + chr3_1:76986749-76986768 Msa0376750:CDS 25.0%
! AAATTTGGAGAAAAGAATGA+GGG + chr3_1:76986905-76986924 Msa0376750:CDS 25.0%
!!! TTGATAATGATAGAGAAGAA+GGG + chr3_1:76987129-76987148 Msa0376750:CDS 25.0%
!! TTTTCCTTATCCATAAACAA+TGG - chr3_1:76987443-76987462 None:intergenic 25.0%
! TTTATGGATAAGGAAAAACT+TGG + chr3_1:76987446-76987465 Msa0376750:CDS 25.0%
!! CACAATTTGTTTGTATTTGA+TGG + chr3_1:76987879-76987898 Msa0376750:intron 25.0%
! ATGAAATAATCTTCATCAAC+AGG - chr3_1:76987935-76987954 None:intergenic 25.0%
! GATGAAGATTATTTCATTAG+TGG + chr3_1:76987938-76987957 Msa0376750:CDS 25.0%
! AAGCACATGTTTAAATTGAA+TGG - chr3_1:76988097-76988116 None:intergenic 25.0%
! TTTAAACATGTGCTTTATAG+AGG + chr3_1:76988102-76988121 Msa0376750:intron 25.0%
! CGAATAATATGATGTATAAC+AGG + chr3_1:76988138-76988157 Msa0376750:intron 25.0%
! AATGGAATATGGAGATATAT+GGG - chr3_1:76988240-76988259 None:intergenic 25.0%
! AAATGGAATATGGAGATATA+TGG - chr3_1:76988241-76988260 None:intergenic 25.0%
! GGGTCAAAAAATAACTTAAA+TGG - chr3_1:76988258-76988277 None:intergenic 25.0%
! TACTTCTTATTCAAAATCTG+TGG - chr3_1:76988348-76988367 None:intergenic 25.0%
! AATTGAAAACCAGAAATGTT+AGG - chr3_1:76988474-76988493 None:intergenic 25.0%
! TTTACCAATTAAGCATAGTT+GGG - chr3_1:76988532-76988551 None:intergenic 25.0%
!! TTTTACCAATTAAGCATAGT+TGG - chr3_1:76988533-76988552 None:intergenic 25.0%
!! CTTTTTCTCTGACAATTTTT+TGG + chr3_1:76988632-76988651 Msa0376750:intron 25.0%
! AATTATATGTTCTGTCACTA+AGG + chr3_1:76988877-76988896 Msa0376750:intron 25.0%
! TAACTTTCTTAGATTTCATG+GGG - chr3_1:76989042-76989061 None:intergenic 25.0%
! CTAACTTTCTTAGATTTCAT+GGG - chr3_1:76989043-76989062 None:intergenic 25.0%
!! GACATTCAATTGTTCATTTT+CGG - chr3_1:76989134-76989153 None:intergenic 25.0%
!! TTGATTCTATTTTCCAACTT+AGG - chr3_1:76989483-76989502 None:intergenic 25.0%
! CTTGAGAATGATGTTAAATT+TGG + chr3_1:76989756-76989775 Msa0376750:three_prime_UTR 25.0%
! TTGATCTTAAAGTCGTAATT+AGG + chr3_1:76989906-76989925 Msa0376750:three_prime_UTR 25.0%
!! TTAAAGTCGTAATTAGGTTT+TGG + chr3_1:76989912-76989931 Msa0376750:three_prime_UTR 25.0%
! ATGTGTTAAAAAAACTTGCA+AGG + chr3_1:76989975-76989994 Msa0376750:three_prime_UTR 25.0%
! TGTGTTAAAAAAACTTGCAA+GGG + chr3_1:76989976-76989995 Msa0376750:three_prime_UTR 25.0%
!! TATCAAAATCGTCTCTTTTA+GGG - chr3_1:76990003-76990022 None:intergenic 25.0%
!! ATATCAAAATCGTCTCTTTT+AGG - chr3_1:76990004-76990023 None:intergenic 25.0%
! TTTCATCTTAGCAACTAAAA+GGG - chr3_1:76990054-76990073 None:intergenic 25.0%
! ATGATCAATCAAAATGCTAA+GGG + chr3_1:76990111-76990130 Msa0376750:three_prime_UTR 25.0%
!! TCAATGATGATATCTCTTTT+TGG + chr3_1:76990545-76990564 Msa0376750:three_prime_UTR 25.0%
AGAGTGTGTGTTTGAAAATT+AGG - chr3_1:76985969-76985988 None:intergenic 30.0%
GGTATGAATAAATTGTTGGA+AGG - chr3_1:76986058-76986077 None:intergenic 30.0%
TAAAAGCTGTGAAGACAAAA+GGG - chr3_1:76986079-76986098 None:intergenic 30.0%
TTAAAAGCTGTGAAGACAAA+AGG - chr3_1:76986080-76986099 None:intergenic 30.0%
ATACCTGGTTATTATGGATT+GGG + chr3_1:76986182-76986201 Msa0376750:intron 30.0%
!! TTGGTTTGGTTTGAATCTAT+CGG + chr3_1:76986222-76986241 Msa0376750:intron 30.0%
ATGTGTAGTTGTTTATGATC+TGG + chr3_1:76986383-76986402 Msa0376750:intron 30.0%
TGTGTAGTTGTTTATGATCT+GGG + chr3_1:76986384-76986403 Msa0376750:intron 30.0%
!! AAGTTTTTGTTTCCTTGAAG+GGG + chr3_1:76986458-76986477 Msa0376750:five_prime_UTR 30.0%
ATCATCATCATCATCATCAT+CGG - chr3_1:76986592-76986611 None:intergenic 30.0%
! GATGATGATGATGATGATAA+AGG + chr3_1:76986594-76986613 Msa0376750:CDS 30.0%
! TGATGATGATGATGATAAAG+GGG + chr3_1:76986596-76986615 Msa0376750:CDS 30.0%
TTGATTATGAAGTGTGGATT+CGG + chr3_1:76986637-76986656 Msa0376750:CDS 30.0%
! AAGAGGAATTTAGTTCATGT+CGG + chr3_1:76986799-76986818 Msa0376750:CDS 30.0%
GAAATTTGGAGAAAAGAATG+AGG + chr3_1:76986904-76986923 Msa0376750:CDS 30.0%
ATTGATAGATAGAGAGTTTG+AGG + chr3_1:76987022-76987041 Msa0376750:CDS 30.0%
!! GTTGATAATGATAGAGAAGA+AGG + chr3_1:76987128-76987147 Msa0376750:CDS 30.0%
! TCATTTTCTTCCTACATTGA+CGG - chr3_1:76987196-76987215 None:intergenic 30.0%
TCAATGTAGGAAGAAAATGA+AGG + chr3_1:76987196-76987215 Msa0376750:CDS 30.0%
ACTGTAAAGTAAATGCTTGA+GGG - chr3_1:76987398-76987417 None:intergenic 30.0%
TCAATTGACACCATTGTTTA+TGG + chr3_1:76987430-76987449 Msa0376750:CDS 30.0%
AAGAAGATACTGCATTCAAA+AGG - chr3_1:76987696-76987715 None:intergenic 30.0%
! GTGTTTTCACACAGTAATTA+TGG + chr3_1:76987776-76987795 Msa0376750:CDS 30.0%
TAATATGATGTATAACAGGG+AGG + chr3_1:76988142-76988161 Msa0376750:intron 30.0%
AATATGATGTATAACAGGGA+GGG + chr3_1:76988143-76988162 Msa0376750:intron 30.0%
! GATCTTTAGAAGGAAATTGT+TGG + chr3_1:76988173-76988192 Msa0376750:CDS 30.0%
!!! TTTTTTGACCCTTCGATTTT+TGG + chr3_1:76988267-76988286 Msa0376750:intron 30.0%
ATTGGTAAAAAGAAACTTCC+TGG + chr3_1:76988543-76988562 Msa0376750:CDS 30.0%
ATAACTTTCTTGGAATCTTG+AGG - chr3_1:76988695-76988714 None:intergenic 30.0%
TCAAGATTCCAAGAAAGTTA+TGG + chr3_1:76988694-76988713 Msa0376750:CDS 30.0%
ACATGTAACCATAACTTTCT+TGG - chr3_1:76988705-76988724 None:intergenic 30.0%
AGTATGTAGGGATTTAACAA+AGG - chr3_1:76988790-76988809 None:intergenic 30.0%
AGGACTCTAATGTATATCTA+TGG + chr3_1:76988990-76989009 Msa0376750:CDS 30.0%
ATATCTATGGAACGTTAATC+AGG + chr3_1:76989003-76989022 Msa0376750:CDS 30.0%
CCTAACTTTCTTAGATTTCA+TGG - chr3_1:76989044-76989063 None:intergenic 30.0%
CCATGAAATCTAAGAAAGTT+AGG + chr3_1:76989041-76989060 Msa0376750:CDS 30.0%
! AATTGTTCATTTTCGGAGAT+TGG - chr3_1:76989127-76989146 None:intergenic 30.0%
TGTAATTGCATAACAACTTG+TGG - chr3_1:76989172-76989191 None:intergenic 30.0%
!!! TCTGAACCAAGATTTTTTCT+TGG + chr3_1:76989216-76989235 Msa0376750:CDS 30.0%
AAGACTCCAAGAAAAAATCT+TGG - chr3_1:76989225-76989244 None:intergenic 30.0%
!!! CAATGATGTTTTTTTGGTCT+TGG - chr3_1:76989299-76989318 None:intergenic 30.0%
AAGTCACACTTCATTTCAAA+CGG - chr3_1:76989458-76989477 None:intergenic 30.0%
ATCAAGATTCATTGCTTTGT+TGG + chr3_1:76989498-76989517 Msa0376750:three_prime_UTR 30.0%
! TGTAGCATGTAGTTTTCTAA+AGG - chr3_1:76989533-76989552 None:intergenic 30.0%
ACTACATGCTACAAAGTTTA+TGG + chr3_1:76989540-76989559 Msa0376750:three_prime_UTR 30.0%
TATCATGCGGTAATCAATTT+CGG - chr3_1:76989697-76989716 None:intergenic 30.0%
ATGTTAAATTTGGCAGCATA+AGG + chr3_1:76989766-76989785 Msa0376750:three_prime_UTR 30.0%
ATAAGGTAACAAGCAATTTG+AGG + chr3_1:76989783-76989802 Msa0376750:three_prime_UTR 30.0%
! TAATCTGATTTTCTTGCACA+TGG - chr3_1:76989815-76989834 None:intergenic 30.0%
GCAAGAAAATCAGATTATTG+AGG + chr3_1:76989818-76989837 Msa0376750:three_prime_UTR 30.0%
! ATGACTTTGCATCTCTTTTA+GGG - chr3_1:76989957-76989976 None:intergenic 30.0%
!! AGACGATTTTGATATGTTGT+GGG + chr3_1:76990009-76990028 Msa0376750:three_prime_UTR 30.0%
CTTTCATCTTAGCAACTAAA+AGG - chr3_1:76990055-76990074 None:intergenic 30.0%
!! CTTTTAGTTGCTAAGATGAA+AGG + chr3_1:76990053-76990072 Msa0376750:three_prime_UTR 30.0%
CATGATCAATCAAAATGCTA+AGG + chr3_1:76990110-76990129 Msa0376750:three_prime_UTR 30.0%
! GTTTAACCCTTTTGTACAAA+TGG - chr3_1:76990182-76990201 None:intergenic 30.0%
TTGTACAAAAGGGTTAAACT+TGG + chr3_1:76990183-76990202 Msa0376750:three_prime_UTR 30.0%
ACAAGCAATGTGATTATGAT+CGG + chr3_1:76990276-76990295 Msa0376750:three_prime_UTR 30.0%
GTTGTACCTCAACTAATTAA+AGG - chr3_1:76990412-76990431 None:intergenic 30.0%
!!! TATTTTGTTGGTTTGCCTTT+TGG + chr3_1:76990491-76990510 Msa0376750:three_prime_UTR 30.0%
! TTCTATTTCTCTCAACCAAA+AGG - chr3_1:76990509-76990528 None:intergenic 30.0%
AAAGAGGAGGAAGCAAAAAT+GGG - chr3_1:76985925-76985944 None:intergenic 35.0%
ACAAACACGGAGATTGAAAA+CGG - chr3_1:76986114-76986133 None:intergenic 35.0%
CATACCTGGTTATTATGGAT+TGG + chr3_1:76986181-76986200 Msa0376750:intron 35.0%
!! TTATGGATTGGGATCTATGT+TGG + chr3_1:76986193-76986212 Msa0376750:intron 35.0%
!! TATGTTGGATTGGATTGGTT+TGG + chr3_1:76986208-76986227 Msa0376750:intron 35.0%
!! TTGGATTTTGACGCATTCAT+AGG + chr3_1:76986431-76986450 Msa0376750:five_prime_UTR 35.0%
!! TGGATTTTGACGCATTCATA+GGG + chr3_1:76986432-76986451 Msa0376750:five_prime_UTR 35.0%
!! AGTTTTTGTTTCCTTGAAGG+GGG + chr3_1:76986459-76986478 Msa0376750:five_prime_UTR 35.0%
AATCATATGGGTAGTTTCAG+TGG + chr3_1:76986504-76986523 Msa0376750:exon 35.0%
AAGAGGATGTTGTGTCTATT+AGG + chr3_1:76986556-76986575 Msa0376750:CDS 35.0%
AGAGGATGTTGTGTCTATTA+GGG + chr3_1:76986557-76986576 Msa0376750:CDS 35.0%
GAAAGAAGAAGAGATAGTAG+TGG + chr3_1:76986771-76986790 Msa0376750:CDS 35.0%
! AATAACTTGCCATCTCAAGA+TGG + chr3_1:76986882-76986901 Msa0376750:CDS 35.0%
TCCAAATTTCCATCTTGAGA+TGG - chr3_1:76986894-76986913 None:intergenic 35.0%
GAGTGATTGTTCAAATCAGT+TGG + chr3_1:76986941-76986960 Msa0376750:CDS 35.0%
!! AAATCAGTTGGTAGTTGCTA+AGG + chr3_1:76986953-76986972 Msa0376750:CDS 35.0%
AGGATTGTGTAAATGTCTCT+GGG + chr3_1:76986982-76987001 Msa0376750:CDS 35.0%
TGGTTACTAGAACGGTAAAT+AGG + chr3_1:76987060-76987079 Msa0376750:CDS 35.0%
GGTTACTAGAACGGTAAATA+GGG + chr3_1:76987061-76987080 Msa0376750:CDS 35.0%
AACTTTCATCGCTTTACTTG+AGG + chr3_1:76987219-76987238 Msa0376750:CDS 35.0%
ACCATGAAATTTAGTCCTGA+TGG + chr3_1:76987275-76987294 Msa0376750:CDS 35.0%
CCATGAAATTTAGTCCTGAT+GGG + chr3_1:76987276-76987295 Msa0376750:CDS 35.0%
CTGTAAAGTAAATGCTTGAG+GGG - chr3_1:76987397-76987416 None:intergenic 35.0%
CACTGTAAAGTAAATGCTTG+AGG - chr3_1:76987399-76987418 None:intergenic 35.0%
GACACCATTGTTTATGGATA+AGG + chr3_1:76987436-76987455 Msa0376750:CDS 35.0%
! GCATTTCTATTCCGATTTGT+AGG + chr3_1:76987810-76987829 Msa0376750:intron 35.0%
ACCTAAAGAAGCCTACAAAT+CGG - chr3_1:76987824-76987843 None:intergenic 35.0%
CTGTTGTGGTCAAACAAATT+AGG - chr3_1:76987852-76987871 None:intergenic 35.0%
AATTGTGAGATGAACTGTTG+TGG - chr3_1:76987866-76987885 None:intergenic 35.0%
! TTCATTAGTGGATCCATAGA+CGG + chr3_1:76987950-76987969 Msa0376750:CDS 35.0%
TTAAATAATACCTGCCCATC+CGG - chr3_1:76988061-76988080 None:intergenic 35.0%
!! CAGAAGTACCAAAAATCGAA+GGG - chr3_1:76988278-76988297 None:intergenic 35.0%
!! TCAGAAGTACCAAAAATCGA+AGG - chr3_1:76988279-76988298 None:intergenic 35.0%
AATCACTTAAGACTTGAGCT+TGG + chr3_1:76988447-76988466 Msa0376750:intron 35.0%
GATTCCCAACTATGCTTAAT+TGG + chr3_1:76988525-76988544 Msa0376750:CDS 35.0%
AAATCACATTAAGCCCATCA+AGG - chr3_1:76988748-76988767 None:intergenic 35.0%
GCGAAATCAACAAGTATGTA+GGG - chr3_1:76988802-76988821 None:intergenic 35.0%
TGCGAAATCAACAAGTATGT+AGG - chr3_1:76988803-76988822 None:intergenic 35.0%
!! TTATTTTCAGGCCTTAACAC+AGG + chr3_1:76988911-76988930 Msa0376750:intron 35.0%
TAAAATATGTTTCCCGTCTG+AGG - chr3_1:76988960-76988979 None:intergenic 35.0%
! ACATATTTTATCAGCATGCG+AGG + chr3_1:76988970-76988989 Msa0376750:CDS 35.0%
! TTTCTTGGAGTCTTTTCCAA+AGG + chr3_1:76989231-76989250 Msa0376750:CDS 35.0%
! TTCTTGGAGTCTTTTCCAAA+GGG + chr3_1:76989232-76989251 Msa0376750:CDS 35.0%
!!! TCGCAGCAATGATGTTTTTT+TGG - chr3_1:76989305-76989324 None:intergenic 35.0%
AGTCACACTTCATTTCAAAC+GGG - chr3_1:76989457-76989476 None:intergenic 35.0%
! AAGTGTGACTTTTCCTAAGT+TGG + chr3_1:76989467-76989486 Msa0376750:three_prime_UTR 35.0%
AAATGATCCTGCGATTGATT+TGG - chr3_1:76989622-76989641 None:intergenic 35.0%
!! GTCATTGATTTGAGATCGAA+CGG - chr3_1:76989675-76989694 None:intergenic 35.0%
TTATTGAGGTCAATGACAAG+TGG + chr3_1:76989832-76989851 Msa0376750:three_prime_UTR 35.0%
! TGACTTTGCATCTCTTTTAG+GGG - chr3_1:76989956-76989975 None:intergenic 35.0%
! CATGACTTTGCATCTCTTTT+AGG - chr3_1:76989958-76989977 None:intergenic 35.0%
!! GAGACGATTTTGATATGTTG+TGG + chr3_1:76990008-76990027 Msa0376750:three_prime_UTR 35.0%
! GCAACTAAAAGGGTTTTCAA+AGG - chr3_1:76990044-76990063 None:intergenic 35.0%
TTAGTTGCTAAGATGAAAGG+TGG + chr3_1:76990056-76990075 Msa0376750:three_prime_UTR 35.0%
TTGTGGCCATTTGTACAAAA+GGG + chr3_1:76990173-76990192 Msa0376750:three_prime_UTR 35.0%
!! GTGATTATGATCGGTTTTAG+TGG + chr3_1:76990285-76990304 Msa0376750:three_prime_UTR 35.0%
! CTGTACATGGTCTCAATTTT+AGG + chr3_1:76990377-76990396 Msa0376750:three_prime_UTR 35.0%
CAACTAATTAAAGGCGATGT+TGG - chr3_1:76990403-76990422 None:intergenic 35.0%
ACATCGCCTTTAATTAGTTG+AGG + chr3_1:76990403-76990422 Msa0376750:three_prime_UTR 35.0%
TAGTTGAGGTACAACTATGT+TGG + chr3_1:76990417-76990436 Msa0376750:three_prime_UTR 35.0%
!! GATATCTCTTTTTGGTCATC+AGG + chr3_1:76990553-76990572 Msa0376750:three_prime_UTR 35.0%
GCGAAAACGATGATACAAAG+TGG - chr3_1:76985891-76985910 None:intergenic 40.0%
GAAAGAGGAGGAAGCAAAAA+TGG - chr3_1:76985926-76985945 None:intergenic 40.0%
!! AGTGTTGTTGATGACGAAAG+AGG - chr3_1:76985941-76985960 None:intergenic 40.0%
GATCCCAATCCATAATAACC+AGG - chr3_1:76986188-76986207 None:intergenic 40.0%
GATTGGGATCTATGTTGGAT+TGG + chr3_1:76986198-76986217 Msa0376750:intron 40.0%
! GGATCTATGTTGGATTGGAT+TGG + chr3_1:76986203-76986222 Msa0376750:intron 40.0%
GTAGTTGTTTATGATCTGGG+TGG + chr3_1:76986387-76986406 Msa0376750:intron 40.0%
TCAGTGGAGAAGAAGATTGT+CGG + chr3_1:76986520-76986539 Msa0376750:CDS 40.0%
!!! TCGGTTTTTTGATGCTGAAG+AGG + chr3_1:76986539-76986558 Msa0376750:CDS 40.0%
!! AGATAGTAGTGGTTCTGAAG+AGG + chr3_1:76986782-76986801 Msa0376750:CDS 40.0%
ACACTAGAGCAACAAGACAT+TGG - chr3_1:76986828-76986847 None:intergenic 40.0%
TTGCTCTAGTGTGAGTTCTT+CGG + chr3_1:76986836-76986855 Msa0376750:CDS 40.0%
! TTCGGAGGAATTTGGTTTAG+TGG + chr3_1:76986854-76986873 Msa0376750:CDS 40.0%
GCCATCTCAAGATGGAAATT+TGG + chr3_1:76986890-76986909 Msa0376750:CDS 40.0%
GAGGATTGTGTAAATGTCTC+TGG + chr3_1:76986981-76987000 Msa0376750:CDS 40.0%
GGATTGTGTAAATGTCTCTG+GGG + chr3_1:76986983-76987002 Msa0376750:CDS 40.0%
! TGGTGATGTGGTTACTAGAA+CGG + chr3_1:76987052-76987071 Msa0376750:CDS 40.0%
GTGTAGGCTTCAGAAAGTAA+AGG + chr3_1:76987169-76987188 Msa0376750:CDS 40.0%
AAGTAAAGGTCCGTCAATGT+AGG + chr3_1:76987183-76987202 Msa0376750:CDS 40.0%
CCCATCAGGACTAAATTTCA+TGG - chr3_1:76987279-76987298 None:intergenic 40.0%
AACAACACAAGCTGAATCTG+CGG - chr3_1:76987495-76987514 None:intergenic 40.0%
! GCAATGGTTTTTCCAACAAC+CGG - chr3_1:76987535-76987554 None:intergenic 40.0%
AAACTTCACTTCTATGCCCA+CGG - chr3_1:76987565-76987584 None:intergenic 40.0%
! TGGGCATAGAAGTGAAGTTT+TGG + chr3_1:76987565-76987584 Msa0376750:CDS 40.0%
!!! GTGAAGTTTTGGATCTCTCT+TGG + chr3_1:76987576-76987595 Msa0376750:CDS 40.0%
GTGAAAACACTTCCAAGCAA+TGG - chr3_1:76987766-76987785 None:intergenic 40.0%
! TCCGATTTGTAGGCTTCTTT+AGG + chr3_1:76987820-76987839 Msa0376750:intron 40.0%
CAATCAACAACCTGAGAATC+GGG - chr3_1:76987998-76988017 None:intergenic 40.0%
CCAATCAACAACCTGAGAAT+CGG - chr3_1:76987999-76988018 None:intergenic 40.0%
GGGATTGTTGGATCTTTAGA+AGG + chr3_1:76988163-76988182 Msa0376750:CDS 40.0%
AAAAAGAAACTTCCTGGCAG+AGG + chr3_1:76988549-76988568 Msa0376750:CDS 40.0%
AAAAGAAACTTCCTGGCAGA+GGG + chr3_1:76988550-76988569 Msa0376750:CDS 40.0%
TCACAAGTCAGAATCCTTGA+TGG + chr3_1:76988731-76988750 Msa0376750:CDS 40.0%
CACAAGTCAGAATCCTTGAT+GGG + chr3_1:76988732-76988751 Msa0376750:CDS 40.0%
GAGGTAAATGATGCACACAT+TGG - chr3_1:76988941-76988960 None:intergenic 40.0%
TGTGCATCATTTACCTCAGA+CGG + chr3_1:76988944-76988963 Msa0376750:CDS 40.0%
! AGAAAGTTAGGTCTTGTGAG+CGG + chr3_1:76989053-76989072 Msa0376750:CDS 40.0%
! TGTTCATTTTCGGAGATTGG+AGG - chr3_1:76989124-76989143 None:intergenic 40.0%
AACATCATTGCTGCGAAAGT+CGG + chr3_1:76989309-76989328 Msa0376750:CDS 40.0%
ACTTCATTTCAAACGGGTAC+AGG - chr3_1:76989451-76989470 None:intergenic 40.0%
TCCAATTCCAAATCAATCGC+AGG + chr3_1:76989612-76989631 Msa0376750:three_prime_UTR 40.0%
!! TCCTGCGATTGATTTGGAAT+TGG - chr3_1:76989616-76989635 None:intergenic 40.0%
TCGAACGGTTCATATTGCAT+AGG - chr3_1:76989660-76989679 None:intergenic 40.0%
CCTGCACTTCAAATATCATG+CGG - chr3_1:76989710-76989729 None:intergenic 40.0%
! CGCATGATATTTGAAGTGCA+GGG + chr3_1:76989708-76989727 Msa0376750:three_prime_UTR 40.0%
GAATCCTGGTCCAAAGTTTA+TGG + chr3_1:76989730-76989749 Msa0376750:three_prime_UTR 40.0%
TCTCAAGCCTCCATAAACTT+TGG - chr3_1:76989743-76989762 None:intergenic 40.0%
GATCAAGACAAGCTAAAGCT+TGG - chr3_1:76989892-76989911 None:intergenic 40.0%
TTTGGTCCACAAGAATCTAC+TGG + chr3_1:76989930-76989949 Msa0376750:three_prime_UTR 40.0%
TTTGATATGTTGTGGGACCA+TGG + chr3_1:76990016-76990035 Msa0376750:three_prime_UTR 40.0%
TTGATATGTTGTGGGACCAT+GGG + chr3_1:76990017-76990036 Msa0376750:three_prime_UTR 40.0%
AAGGTGGAGATTTCAAGAGT+TGG + chr3_1:76990072-76990091 Msa0376750:three_prime_UTR 40.0%
GATCACATGGATGGCAAAAT+TGG - chr3_1:76990153-76990172 None:intergenic 40.0%
CTTGTGGCCATTTGTACAAA+AGG + chr3_1:76990172-76990191 Msa0376750:three_prime_UTR 40.0%
GGGTTAAACTTGGAAATGTG+TGG + chr3_1:76990193-76990212 Msa0376750:three_prime_UTR 40.0%
!! GTTGTTGATGACGAAAGAGG+AGG - chr3_1:76985938-76985957 None:intergenic 45.0%
AACACGGAGATTGAAAACGG+TGG - chr3_1:76986111-76986130 None:intergenic 45.0%
TTCCTTGAAGGGGGATTTCA+TGG + chr3_1:76986468-76986487 Msa0376750:five_prime_UTR 45.0%
TCCTTGAAGGGGGATTTCAT+GGG + chr3_1:76986469-76986488 Msa0376750:five_prime_UTR 45.0%
! AAAGAGTGTGAGAGAGCGTA+GGG + chr3_1:76986665-76986684 Msa0376750:CDS 45.0%
! GGGAGGTTTATGAAGAGCAT+GGG + chr3_1:76986687-76986706 Msa0376750:CDS 45.0%
GTGAGTTCTTCGGAGGAATT+TGG + chr3_1:76986846-76986865 Msa0376750:CDS 45.0%
GGTAGTTGCTAAGGAATCTG+AGG + chr3_1:76986962-76986981 Msa0376750:CDS 45.0%
AGAGAGTTTGAGGATGCAGA+TGG + chr3_1:76987032-76987051 Msa0376750:CDS 45.0%
AACGGTAAATAGGGCGAGAA+GGG + chr3_1:76987070-76987089 Msa0376750:CDS 45.0%
CAAGATATCCAAGCGCATGA+AGG + chr3_1:76987242-76987261 Msa0376750:CDS 45.0%
AAATTGCACCTTCATGCGCT+TGG - chr3_1:76987253-76987272 None:intergenic 45.0%
ATGCTTGAGGGGTCAATTTC+AGG - chr3_1:76987386-76987405 None:intergenic 45.0%
! TTTTCCCGCCTAAGATCTTC+CGG + chr3_1:76987513-76987532 Msa0376750:CDS 45.0%
AACAACCGGAAGATCTTAGG+CGG - chr3_1:76987521-76987540 None:intergenic 45.0%
TCCAACAACCGGAAGATCTT+AGG - chr3_1:76987524-76987543 None:intergenic 45.0%
AAACCATTGCATGAGTTCCG+TGG + chr3_1:76987545-76987564 Msa0376750:CDS 45.0%
AACCATTGCATGAGTTCCGT+GGG + chr3_1:76987546-76987565 Msa0376750:CDS 45.0%
CTGACAAAACTGTCCGACTA+TGG + chr3_1:76987726-76987745 Msa0376750:CDS 45.0%
CACGATTCACTTGCCATAGT+CGG - chr3_1:76987742-76987761 None:intergenic 45.0%
AGTGAATCGTGACCATTGCT+TGG + chr3_1:76987751-76987770 Msa0376750:CDS 45.0%
! TAGTGGATCCATAGACGGAA+AGG + chr3_1:76987955-76987974 Msa0376750:CDS 45.0%
! CCGATTCTCAGGTTGTTGAT+TGG + chr3_1:76987996-76988015 Msa0376750:CDS 45.0%
GACTGCAGTATGTTATCGAC+CGG + chr3_1:76988039-76988058 Msa0376750:CDS 45.0%
CAGTATGTTATCGACCGGAT+GGG + chr3_1:76988044-76988063 Msa0376750:CDS 45.0%
GTATAACAGGGAGGGATTGT+TGG + chr3_1:76988151-76988170 Msa0376750:intron 45.0%
GAGCTTGGTCCTAACATTTC+TGG + chr3_1:76988462-76988481 Msa0376750:intron 45.0%
ACCAGATAATCACTTGCAGC+TGG + chr3_1:76988503-76988522 Msa0376750:intron 45.0%
TCCAGCTGCAAGTGATTATC+TGG - chr3_1:76988507-76988526 None:intergenic 45.0%
ACATTGGACTGCCTGTGTTA+AGG - chr3_1:76988925-76988944 None:intergenic 45.0%
GTGCATCATTTACCTCAGAC+GGG + chr3_1:76988945-76988964 Msa0376750:CDS 45.0%
TTCCTCAAACGCATCAGTTG+CGG + chr3_1:76989078-76989097 Msa0376750:CDS 45.0%
TCAGAGAGAAAGAAGCAGGT+GGG - chr3_1:76989201-76989220 None:intergenic 45.0%
TTCAGAGAGAAAGAAGCAGG+TGG - chr3_1:76989202-76989221 None:intergenic 45.0%
TGGTTCAGAGAGAAAGAAGC+AGG - chr3_1:76989205-76989224 None:intergenic 45.0%
TACCAACAATGCTCATGCGT+GGG + chr3_1:76989363-76989382 Msa0376750:CDS 45.0%
! GTACAGGTAGCCCGTAATTT+TGG - chr3_1:76989435-76989454 None:intergenic 45.0%
! CCGCATGATATTTGAAGTGC+AGG + chr3_1:76989707-76989726 Msa0376750:three_prime_UTR 45.0%
! ATTTGAAGTGCAGGGAATCC+TGG + chr3_1:76989716-76989735 Msa0376750:three_prime_UTR 45.0%
TCCTGGTCCAAAGTTTATGG+AGG + chr3_1:76989733-76989752 Msa0376750:three_prime_UTR 45.0%
! AAGGGTTTTCAAAGGTCCCA+TGG - chr3_1:76990036-76990055 None:intergenic 45.0%
GTGGAGATTTCAAGAGTTGG+TGG + chr3_1:76990075-76990094 Msa0376750:three_prime_UTR 45.0%
TTGCCATCCATGTGATCTTG+TGG + chr3_1:76990156-76990175 Msa0376750:three_prime_UTR 45.0%
CAAATGGCCACAAGATCACA+TGG - chr3_1:76990166-76990185 None:intergenic 45.0%
!!! TGTGTGGCAGTTGTTTTTGC+TGG + chr3_1:76990209-76990228 Msa0376750:three_prime_UTR 45.0%
AGTGGCTCGAAGTCTTTGTT+TGG + chr3_1:76990303-76990322 Msa0376750:three_prime_UTR 45.0%
ACCCATGAAATCCCCCTTCA+AGG - chr3_1:76986473-76986492 None:intergenic 50.0%
CTACGCTCTCTCACACTCTT+TGG - chr3_1:76986666-76986685 None:intergenic 50.0%
! CAAAGAGTGTGAGAGAGCGT+AGG + chr3_1:76986664-76986683 Msa0376750:CDS 50.0%
! AAGAGTGTGAGAGAGCGTAG+GGG + chr3_1:76986666-76986685 Msa0376750:CDS 50.0%
GGGGAGGTTTATGAAGAGCA+TGG + chr3_1:76986686-76986705 Msa0376750:CDS 50.0%
CTCTAGTGTGAGTTCTTCGG+AGG + chr3_1:76986839-76986858 Msa0376750:CDS 50.0%
! TCTGGGGTGTCTCATTGTCA+AGG + chr3_1:76986999-76987018 Msa0376750:CDS 50.0%
! TGAGGATGCAGATGGTGATG+TGG + chr3_1:76987040-76987059 Msa0376750:CDS 50.0%
GAACGGTAAATAGGGCGAGA+AGG + chr3_1:76987069-76987088 Msa0376750:CDS 50.0%
ACGGTAAATAGGGCGAGAAG+GGG + chr3_1:76987071-76987090 Msa0376750:CDS 50.0%
TAAATAGGGCGAGAAGGGGT+TGG + chr3_1:76987075-76987094 Msa0376750:CDS 50.0%
ATTGAGATCGATGACGTGCG+TGG + chr3_1:76987106-76987125 Msa0376750:CDS 50.0%
AAGGGAGCTATGCAGTCTCA+GGG + chr3_1:76987147-76987166 Msa0376750:CDS 50.0%
! TAGTCCTGATGGGCAGTATC+TGG + chr3_1:76987286-76987305 Msa0376750:CDS 50.0%
TGGCTACAGGTGGTGAAGAT+GGG + chr3_1:76987306-76987325 Msa0376750:CDS 50.0%
GTGGTGAAGATGGGGTTGTT+CGG + chr3_1:76987315-76987334 Msa0376750:CDS 50.0%
TGGTGAAGATGGGGTTGTTC+GGG + chr3_1:76987316-76987335 Msa0376750:CDS 50.0%
GCGGTCTTTCTCATGCTCTT+CGG - chr3_1:76987476-76987495 None:intergenic 50.0%
ACAACCGGAAGATCTTAGGC+GGG - chr3_1:76987520-76987539 None:intergenic 50.0%
GCCTAAGATCTTCCGGTTGT+TGG + chr3_1:76987520-76987539 Msa0376750:CDS 50.0%
GCAGTATGTTATCGACCGGA+TGG + chr3_1:76988043-76988062 Msa0376750:CDS 50.0%
!! CAGAGGGATAACTGGCTTTC+AGG + chr3_1:76988566-76988585 Msa0376750:CDS 50.0%
TACCGCAACTGATGCGTTTG+AGG - chr3_1:76989083-76989102 None:intergenic 50.0%
!! AGAAAGAAGCAGGTGGGTTG+GGG - chr3_1:76989195-76989214 None:intergenic 50.0%
! GAGAAAGAAGCAGGTGGGTT+GGG - chr3_1:76989196-76989215 None:intergenic 50.0%
AGAGAAAGAAGCAGGTGGGT+TGG - chr3_1:76989197-76989216 None:intergenic 50.0%
TTCCAAAGGGATCTGCAACC+TGG + chr3_1:76989245-76989264 Msa0376750:CDS 50.0%
GAAACAGGAAGCTTCTCCTC+GGG - chr3_1:76989271-76989290 None:intergenic 50.0%
CGAAACAGGAAGCTTCTCCT+CGG - chr3_1:76989272-76989291 None:intergenic 50.0%
CGAGGAGAAGCTTCCTGTTT+CGG + chr3_1:76989270-76989289 Msa0376750:CDS 50.0%
GAGGAGAAGCTTCCTGTTTC+GGG + chr3_1:76989271-76989290 Msa0376750:CDS 50.0%
GTACCAACAATGCTCATGCG+TGG + chr3_1:76989362-76989381 Msa0376750:CDS 50.0%
ACCAACAATGCTCATGCGTG+GGG + chr3_1:76989364-76989383 Msa0376750:CDS 50.0%
GGTATGGTCATTGTGACTGC+AGG + chr3_1:76989385-76989404 Msa0376750:CDS 50.0%
GCCTCCATAAACTTTGGACC+AGG - chr3_1:76989737-76989756 None:intergenic 50.0%
TAGGGGCCAGTAGATTCTTG+TGG - chr3_1:76989939-76989958 None:intergenic 50.0%
TGGCCACAAGATCACATGGA+TGG - chr3_1:76990162-76990181 None:intergenic 50.0%
! AGAGTGTGAGAGAGCGTAGG+GGG + chr3_1:76986667-76986686 Msa0376750:CDS 55.0%
GAAGGGAGCTATGCAGTCTC+AGG + chr3_1:76987146-76987165 Msa0376750:CDS 55.0%
GCTATGCAGTCTCAGGGTGT+AGG + chr3_1:76987153-76987172 Msa0376750:CDS 55.0%
GTAGCCAGATACTGCCCATC+AGG - chr3_1:76987293-76987312 None:intergenic 55.0%
GATGGGCAGTATCTGGCTAC+AGG + chr3_1:76987293-76987312 Msa0376750:CDS 55.0%
CTGGCTACAGGTGGTGAAGA+TGG + chr3_1:76987305-76987324 Msa0376750:CDS 55.0%
GGCTACAGGTGGTGAAGATG+GGG + chr3_1:76987307-76987326 Msa0376750:CDS 55.0%
AAGATGGGGTTGTTCGGGTG+TGG + chr3_1:76987321-76987340 Msa0376750:CDS 55.0%
TGCCCACGGAACTCATGCAA+TGG - chr3_1:76987551-76987570 None:intergenic 55.0%
GATGCGCACCTTTCCGTCTA+TGG - chr3_1:76987966-76987985 None:intergenic 55.0%
! TAGACGGAAAGGTGCGCATC+TGG + chr3_1:76987966-76987985 Msa0376750:CDS 55.0%
CTGGACGATACCCGATTCTC+AGG + chr3_1:76987985-76988004 Msa0376750:CDS 55.0%
ATGTTATCGACCGGATGGGC+AGG + chr3_1:76988048-76988067 Msa0376750:CDS 55.0%
CTTCCTGGCAGAGGGATAAC+TGG + chr3_1:76988558-76988577 Msa0376750:CDS 55.0%
AAGCCAGTTATCCCTCTGCC+AGG - chr3_1:76988564-76988583 None:intergenic 55.0%
ACGCATCAGTTGCGGTACCT+TGG + chr3_1:76989086-76989105 Msa0376750:CDS 55.0%
TCAGTTGCGGTACCTTGGCA+CGG + chr3_1:76989091-76989110 Msa0376750:CDS 55.0%
GGAGGTTTCAAACCGTGCCA+AGG - chr3_1:76989106-76989125 None:intergenic 55.0%
!! TTGGTCTTGGAGCCCGAAAC+AGG - chr3_1:76989286-76989305 None:intergenic 55.0%
! ACCCCACGCATGAGCATTGT+TGG - chr3_1:76989368-76989387 None:intergenic 55.0%
CAATGCTCATGCGTGGGGTA+TGG + chr3_1:76989369-76989388 Msa0376750:CDS 55.0%
TGGTCATTGTGACTGCAGGC+TGG + chr3_1:76989389-76989408 Msa0376750:CDS 55.0%
GGTCATTGTGACTGCAGGCT+GGG + chr3_1:76989390-76989409 Msa0376750:CDS 55.0%
ATTGTGACTGCAGGCTGGGA+CGG + chr3_1:76989394-76989413 Msa0376750:CDS 55.0%
GGGCAGTATCTGGCTACAGG+TGG + chr3_1:76987296-76987315 Msa0376750:CDS 60.0%
GGTTGTTCGGGTGTGGCAAG+TGG + chr3_1:76987328-76987347 Msa0376750:CDS 60.0%
TCGGGTGTGGCAAGTGGTTG+AGG + chr3_1:76987334-76987353 Msa0376750:CDS 60.0%
GGTGTGGCAAGTGGTTGAGG+AGG + chr3_1:76987337-76987356 Msa0376750:CDS 60.0%
GGCCAGGTTGCAGATCCCTT+TGG - chr3_1:76989250-76989269 None:intergenic 60.0%
TTGTGACTGCAGGCTGGGAC+GGG + chr3_1:76989395-76989414 Msa0376750:CDS 60.0%
! GTGTGAGAGAGCGTAGGGGG+AGG + chr3_1:76986670-76986689 Msa0376750:CDS 65.0%
AGGAAGCTTCTCCTCGGGCC+AGG - chr3_1:76989266-76989285 None:intergenic 65.0%
GGGATCTGCAACCTGGCCCG+AGG + chr3_1:76989252-76989271 Msa0376750:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 76985842 76990624 76985842 ID=Msa0376750;Name=Msa0376750
chr3_1 mRNA 76985842 76990624 76985842 ID=Msa0376750-mRNA-1;Parent=Msa0376750;Name=Msa0376750-mRNA-1;_AED=0.06;_eAED=0.06;_QI=288|1|1|1|0.85|0.75|8|1162|705
chr3_1 exon 76985842 76986010 76985842 ID=Msa0376750-mRNA-1:exon:18338;Parent=Msa0376750-mRNA-1
chr3_1 exon 76986391 76987610 76986391 ID=Msa0376750-mRNA-1:exon:18339;Parent=Msa0376750-mRNA-1
chr3_1 exon 76987707 76987797 76987707 ID=Msa0376750-mRNA-1:exon:18340;Parent=Msa0376750-mRNA-1
chr3_1 exon 76987912 76988069 76987912 ID=Msa0376750-mRNA-1:exon:18341;Parent=Msa0376750-mRNA-1
chr3_1 exon 76988160 76988211 76988160 ID=Msa0376750-mRNA-1:exon:18342;Parent=Msa0376750-mRNA-1
chr3_1 exon 76988508 76988587 76988508 ID=Msa0376750-mRNA-1:exon:18343;Parent=Msa0376750-mRNA-1
chr3_1 exon 76988686 76988779 76988686 ID=Msa0376750-mRNA-1:exon:18344;Parent=Msa0376750-mRNA-1
chr3_1 exon 76988921 76990624 76988921 ID=Msa0376750-mRNA-1:exon:18345;Parent=Msa0376750-mRNA-1
chr3_1 five_prime_UTR 76985842 76986010 76985842 ID=Msa0376750-mRNA-1:five_prime_utr;Parent=Msa0376750-mRNA-1
chr3_1 five_prime_UTR 76986391 76986509 76986391 ID=Msa0376750-mRNA-1:five_prime_utr;Parent=Msa0376750-mRNA-1
chr3_1 CDS 76986510 76987610 76986510 ID=Msa0376750-mRNA-1:cds;Parent=Msa0376750-mRNA-1
chr3_1 CDS 76987707 76987797 76987707 ID=Msa0376750-mRNA-1:cds;Parent=Msa0376750-mRNA-1
chr3_1 CDS 76987912 76988069 76987912 ID=Msa0376750-mRNA-1:cds;Parent=Msa0376750-mRNA-1
chr3_1 CDS 76988160 76988211 76988160 ID=Msa0376750-mRNA-1:cds;Parent=Msa0376750-mRNA-1
chr3_1 CDS 76988508 76988587 76988508 ID=Msa0376750-mRNA-1:cds;Parent=Msa0376750-mRNA-1
chr3_1 CDS 76988686 76988779 76988686 ID=Msa0376750-mRNA-1:cds;Parent=Msa0376750-mRNA-1
chr3_1 CDS 76988921 76989462 76988921 ID=Msa0376750-mRNA-1:cds;Parent=Msa0376750-mRNA-1
chr3_1 three_prime_UTR 76989463 76990624 76989463 ID=Msa0376750-mRNA-1:three_prime_utr;Parent=Msa0376750-mRNA-1
Gene Sequence

>Msa0376750

ATGGGTAGTTTCAGTGGAGAAGAAGATTGTCGGTTTTTTGATGCTGAAGAGGATGTTGTGTCTATTAGGGATGTAAATTCCGATGATGATGATGATGATGATAAAGGGGTGTCTGTGTCTGTTGATTTTGATTATGAAGTGTGGATTCGGAGTCCAAAGAGTGTGAGAGAGCGTAGGGGGAGGTTTATGAAGAGCATGGGAATGAGTGTAGATGAAATTGTAGTTGAAAATTCATTGTATTTTGAGAAGGAAAAGATTATGGAAAGAAGAAGAGATAGTAGTGGTTCTGAAGAGGAATTTAGTTCATGTCGGCTGCCAATGTCTTGTTGCTCTAGTGTGAGTTCTTCGGAGGAATTTGGTTTAGTGGATATTAATAACTTGCCATCTCAAGATGGAAATTTGGAGAAAAGAATGAGGGATAATGAGAAGATGAGTGATTGTTCAAATCAGTTGGTAGTTGCTAAGGAATCTGAGGATTGTGTAAATGTCTCTGGGGTGTCTCATTGTCAAGGATTGATAGATAGAGAGTTTGAGGATGCAGATGGTGATGTGGTTACTAGAACGGTAAATAGGGCGAGAAGGGGTTGGTTGAGAAGATTGAGATCGATGACGTGCGTGGTTGATAATGATAGAGAAGAAGGGAGCTATGCAGTCTCAGGGTGTAGGCTTCAGAAAGTAAAGGTCCGTCAATGTAGGAAGAAAATGAAGGAACTTTCATCGCTTTACTTGAGGCAAGATATCCAAGCGCATGAAGGTGCAATTTTGACCATGAAATTTAGTCCTGATGGGCAGTATCTGGCTACAGGTGGTGAAGATGGGGTTGTTCGGGTGTGGCAAGTGGTTGAGGAGGATAGATGTAATGAAATTCACATTCCTGAAATTGACCCCTCAAGCATTTACTTTACAGTGAATAATCTCTCTCAATTGACACCATTGTTTATGGATAAGGAAAAACTTGGTCAACCGAAGAGCATGAGAAAGACCGCAGATTCAGCTTGTGTTGTTTTCCCGCCTAAGATCTTCCGGTTGTTGGAAAAACCATTGCATGAGTTCCGTGGGCATAGAAGTGAAGTTTTGGATCTCTCTTGGTCAAAGAAGAATTATCTTCTTTCATCATCAGCTGACAAAACTGTCCGACTATGGCAAGTGAATCGTGACCATTGCTTGGAAGTGTTTTCACACAGTAATTATGTGACATGCATACAATTCAATCCTGTTGATGAAGATTATTTCATTAGTGGATCCATAGACGGAAAGGTGCGCATCTGGACGATACCCGATTCTCAGGTTGTTGATTGGACTGATGTCAGAGACATAGTGACTGCAGTATGTTATCGACCGGATGGGCAGGGAGGGATTGTTGGATCTTTAGAAGGAAATTGTTGGTTTTATAAAATATCAGATAATCACTTGCAGCTGGATTCCCAACTATGCTTAATTGGTAAAAAGAAACTTCCTGGCAGAGGGATAACTGGCTTTCAGTTTCTTCCTCAAGATTCCAAGAAAGTTATGGTTACATGTGCTGATTCACAAGTCAGAATCCTTGATGGGCTTAATGTGATTTGTAAATACAAAAGCCTTAACACAGGCAGTCCAATGTGTGCATCATTTACCTCAGACGGGAAACATATTTTATCAGCATGCGAGGACTCTAATGTATATCTATGGAACGTTAATCAGGAAGAGTCTAATAACCCCATGAAATCTAAGAAAGTTAGGTCTTGTGAGCGGTTTTCCTCAAACGCATCAGTTGCGGTACCTTGGCACGGTTTGAAACCTCCAATCTCCGAAAATGAACAATTGAATGTCTTGAATAAAAAGTCACCACAAGTTGTTATGCAATTACACCCCAACCCACCTGCTTCTTTCTCTCTGAACCAAGATTTTTTCTTGGAGTCTTTTCCAAAGGGATCTGCAACCTGGCCCGAGGAGAAGCTTCCTGTTTCGGGCTCCAAGACCAAAAAAACATCATTGCTGCGAAAGTCGGAATACAAATTCTTGAAATCTTCATGTAAGAGTACCAACAATGCTCATGCGTGGGGTATGGTCATTGTGACTGCAGGCTGGGACGGGAAGATAAAAACATTCCAAAATTACGGGCTACCTGTACCCGTTTGA
Protein sequence

>Msa0376750

MGSFSGEEDCRFFDAEEDVVSIRDVNSDDDDDDDKGVSVSVDFDYEVWIRSPKSVRERRGRFMKSMGMSVDEIVVENSLYFEKEKIMERRRDSSGSEEEFSSCRLPMSCCSSVSSSEEFGLVDINNLPSQDGNLEKRMRDNEKMSDCSNQLVVAKESEDCVNVSGVSHCQGLIDREFEDADGDVVTRTVNRARRGWLRRLRSMTCVVDNDREEGSYAVSGCRLQKVKVRQCRKKMKELSSLYLRQDIQAHEGAILTMKFSPDGQYLATGGEDGVVRVWQVVEEDRCNEIHIPEIDPSSIYFTVNNLSQLTPLFMDKEKLGQPKSMRKTADSACVVFPPKIFRLLEKPLHEFRGHRSEVLDLSWSKKNYLLSSSADKTVRLWQVNRDHCLEVFSHSNYVTCIQFNPVDEDYFISGSIDGKVRIWTIPDSQVVDWTDVRDIVTAVCYRPDGQGGIVGSLEGNCWFYKISDNHLQLDSQLCLIGKKKLPGRGITGFQFLPQDSKKVMVTCADSQVRILDGLNVICKYKSLNTGSPMCASFTSDGKHILSACEDSNVYLWNVNQEESNNPMKSKKVRSCERFSSNASVAVPWHGLKPPISENEQLNVLNKKSPQVVMQLHPNPPASFSLNQDFFLESFPKGSATWPEEKLPVSGSKTKKTSLLRKSEYKFLKSSCKSTNNAHAWGMVIVTAGWDGKIKTFQNYGLPVPV*