AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0471690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0471690 MtrunA17_Chr3g0127171 95.177 705 31 1 1 705 1 702 0.0 1352
Msa0471690 MtrunA17_Chr1g0146771 61.570 726 237 15 1 703 1 707 0.0 838
Msa0471690 MtrunA17_Chr8g0388841 43.370 724 363 15 11 705 9 714 0.0 546
Msa0471690 MtrunA17_Chr8g0384061 38.152 671 328 16 46 703 47 643 1.69e-126 390
Msa0471690 MtrunA17_Chr2g0317931 42.468 551 251 13 198 705 331 858 1.26e-124 391
Msa0471690 MtrunA17_Chr3g0129821 43.892 483 243 7 225 703 168 626 3.28e-116 362
Msa0471690 MtrunA17_Chr7g0238321 46.565 393 193 6 206 588 381 766 2.89e-93 310
Msa0471690 MtrunA17_Chr4g0067151 29.075 227 145 9 343 562 66 283 1.53e-19 90.5
Msa0471690 MtrunA17_Chr4g0067151 27.350 234 140 9 243 464 19 234 8.96e-13 70.1
Msa0471690 MtrunA17_Chr1g0185501 25.833 240 158 8 330 562 48 274 1.14e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0471690 AT5G24320.1 46.879 721 319 16 11 705 12 694 0.0 592
Msa0471690 AT5G24320.2 46.897 725 317 17 11 705 12 698 0.0 592
Msa0471690 AT5G53500.2 47.067 716 302 15 1 703 1 652 0.0 581
Msa0471690 AT5G53500.1 47.067 716 302 15 1 703 1 652 0.0 581
Msa0471690 AT5G42010.1 48.496 532 240 13 191 705 195 709 4.04e-163 487
Msa0471690 AT1G64610.2 49.432 528 217 14 189 705 159 647 8.26e-159 473
Msa0471690 AT1G64610.1 49.432 528 217 14 189 705 159 647 8.26e-159 473
Msa0471690 AT5G42010.2 54.118 340 151 4 191 525 195 534 2.51e-125 385
Msa0471690 AT5G54200.1 44.444 504 240 11 224 703 336 823 4.82e-123 387
Msa0471690 AT3G15470.1 42.270 511 253 11 224 705 386 883 3.35e-118 375
Msa0471690 AT1G48870.2 40.612 490 226 11 216 702 163 590 2.43e-103 328
Msa0471690 AT1G48870.3 40.612 490 226 11 216 702 163 590 2.43e-103 328
Msa0471690 AT1G48870.1 40.612 490 226 11 216 702 163 590 2.43e-103 328
Msa0471690 AT5G02430.1 39.692 519 266 13 224 702 384 895 5.66e-95 314
Msa0471690 AT2G37670.1 39.847 522 262 13 226 702 379 893 1.66e-92 307
Msa0471690 AT2G37670.2 39.847 522 262 13 226 702 380 894 1.69e-92 307
Msa0471690 AT3G49660.1 23.385 325 176 12 245 562 18 276 7.79e-18 85.5
Msa0471690 AT4G02730.1 29.224 219 138 10 348 558 78 287 4.36e-17 83.6
Msa0471690 AT2G16405.1 25.214 234 159 4 343 560 202 435 2.25e-14 76.6
Msa0471690 AT5G67320.1 24.691 243 142 9 243 449 357 594 1.54e-11 68.2

Find 231 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGACACCATTGTTTA+TGG 0.074372 3_3:+74072630 Msa0471690:CDS
ACTACATGCTACAAAGTTTA+TGG 0.160182 3_3:+74074740 Msa0471690:three_prime_UTR
GATTCCCAACTATGCTTAAT+TGG 0.172014 3_3:+74073725 Msa0471690:CDS
CAGAGGGATAACTGGCTTTC+AGG 0.188767 3_3:+74073766 Msa0471690:CDS
ATGCTTGAGGGGTCAATTTC+AGG 0.194762 3_3:-74072583 None:intergenic
CTTTCATCTTAGCAACTAAA+AGG 0.214674 3_3:-74075252 None:intergenic
CTTGAGAATGATGTTAAATT+TGG 0.227107 3_3:+74074956 Msa0471690:three_prime_UTR
AAGAGGATGTTGTGTCTATT+AGG 0.227175 3_3:+74071756 Msa0471690:CDS
GAGGAGAAGCTTCCTGTTTC+GGG 0.230139 3_3:+74074471 Msa0471690:CDS
CGAGGAGAAGCTTCCTGTTT+CGG 0.236200 3_3:+74074470 Msa0471690:CDS
GTACAGGTAGCCCGTAATTT+TGG 0.245270 3_3:-74074632 None:intergenic
TTGATCTTAAAGTCGTAATT+AGG 0.253204 3_3:+74075106 Msa0471690:three_prime_UTR
GCCATCTCAAGATGGAAATT+TGG 0.253348 3_3:+74072090 Msa0471690:CDS
ACATGTAACCATAACTTTCT+TGG 0.275795 3_3:-74073902 None:intergenic
TGGTTACTAGAACGGTAAAT+AGG 0.280748 3_3:+74072260 Msa0471690:CDS
AGAGTGTGTGTTTGAAAATT+AGG 0.282450 3_3:-74071171 None:intergenic
CCTAACTTTCTTAGATTTCA+TGG 0.283800 3_3:-74074241 None:intergenic
GAGAAAGAAGCAGGTGGGTT+GGG 0.287380 3_3:-74074393 None:intergenic
TCCAACAACCGGAAGATCTT+AGG 0.295299 3_3:-74072721 None:intergenic
GATCACATGGATGGCAAAAT+TGG 0.299956 3_3:-74075350 None:intergenic
GAATCCTGGTCCAAAGTTTA+TGG 0.301176 3_3:+74074930 Msa0471690:three_prime_UTR
GATGCGCACCTTTCCGTCTA+TGG 0.305937 3_3:-74073163 None:intergenic
AAATGATCCTGCGATTGATT+TGG 0.309802 3_3:-74074819 None:intergenic
GTGAGTTCTTCGGAGGAATT+TGG 0.313989 3_3:+74072046 Msa0471690:CDS
CTACGCTCTCTCACACTCTT+TGG 0.324124 3_3:-74071863 None:intergenic
GATGAAGATTATTTCATTAG+TGG 0.325769 3_3:+74073138 Msa0471690:CDS
TTAAAGTCGTAATTAGGTTT+TGG 0.326674 3_3:+74075112 Msa0471690:three_prime_UTR
GGGATTGTTGGATCTTTAGA+AGG 0.327630 3_3:+74073363 Msa0471690:CDS
TATGTGAGTGTGTATATATA+TGG 0.330391 3_3:-74071063 None:intergenic
GTGGTGAAGATGGGGTTGTT+CGG 0.332946 3_3:+74072515 Msa0471690:CDS
ATCAAGATTCATTGCTTTGT+TGG 0.334144 3_3:+74074698 Msa0471690:three_prime_UTR
GACACCATTGTTTATGGATA+AGG 0.339226 3_3:+74072636 Msa0471690:CDS
CTTCCTGGCAGAGGGATAAC+TGG 0.340161 3_3:+74073758 Msa0471690:CDS
TTGTTGTAATGTAATGTAAA+TGG 0.346787 3_3:+74075066 Msa0471690:three_prime_UTR
TGGTGAAGATGGGGTTGTTC+GGG 0.350996 3_3:+74072516 Msa0471690:CDS
GTTGTACCTCAACTAATTAA+AGG 0.353915 3_3:-74075609 None:intergenic
ATTGATAGATAGAGAGTTTG+AGG 0.355153 3_3:+74072222 Msa0471690:CDS
TTCGGAGGAATTTGGTTTAG+TGG 0.361491 3_3:+74072054 Msa0471690:CDS
AGGACTCTAATGTATATCTA+TGG 0.364797 3_3:+74074190 Msa0471690:CDS
TAGTCCTGATGGGCAGTATC+TGG 0.368035 3_3:+74072486 Msa0471690:CDS
GAGGATTGTGTAAATGTCTC+TGG 0.370035 3_3:+74072181 Msa0471690:CDS
TATCATGCGGTAATCAATTT+CGG 0.373903 3_3:-74074894 None:intergenic
TGGGCATAGAAGTGAAGTTT+TGG 0.376344 3_3:+74072765 Msa0471690:CDS
TAGACGGAAAGGTGCGCATC+TGG 0.381026 3_3:+74073166 Msa0471690:CDS
CCGATTCTCAGGTTGTTGAT+TGG 0.381470 3_3:+74073196 Msa0471690:CDS
GCCTAAGATCTTCCGGTTGT+TGG 0.381485 3_3:+74072720 Msa0471690:CDS
CCATGAAATCTAAGAAAGTT+AGG 0.382192 3_3:+74074241 Msa0471690:CDS
GAAGGGAGCTATGCAGTCTC+AGG 0.387775 3_3:+74072346 Msa0471690:CDS
CTTGTGGCCATTTGTACAAA+AGG 0.391331 3_3:+74075372 Msa0471690:three_prime_UTR
ATGAAATAATCTTCATCAAC+AGG 0.393624 3_3:-74073132 None:intergenic
CTGACAAAACTGTCCGACTA+TGG 0.394030 3_3:+74072926 Msa0471690:CDS
GTTGATAATGATAGAGAAGA+AGG 0.394764 3_3:+74072328 Msa0471690:CDS
TATGTAGTTGTTTATGATCT+GGG 0.398384 3_3:+74071584 Msa0471690:intron
TTGCTCTAGTGTGAGTTCTT+CGG 0.402105 3_3:+74072036 Msa0471690:CDS
AGAAAGAAGCAGGTGGGTTG+GGG 0.408797 3_3:-74074392 None:intergenic
TCAAGATTCCAAGAAAGTTA+TGG 0.411964 3_3:+74073894 Msa0471690:CDS
CTGGCTACAGGTGGTGAAGA+TGG 0.415140 3_3:+74072505 Msa0471690:CDS
TCCTGCGATTGATTTGGAAT+TGG 0.416200 3_3:-74074813 None:intergenic
TTGATTATGAAGTGTGGATT+CGG 0.416684 3_3:+74071837 Msa0471690:CDS
ATGTTAAATTTGGCAGCATA+AGG 0.417388 3_3:+74074966 Msa0471690:three_prime_UTR
TTGGTCTTGGAGCCCGAAAC+AGG 0.417453 3_3:-74074483 None:intergenic
GCGGTCTTTCTCATGCTCTT+CGG 0.420033 3_3:-74072673 None:intergenic
AAGTCACACTTCATTTCAAA+CGG 0.422322 3_3:-74074655 None:intergenic
GGTTACTAGAACGGTAAATA+GGG 0.425943 3_3:+74072261 Msa0471690:CDS
AGTGGCTCGAAGTCTTTGTT+TGG 0.426122 3_3:+74075503 Msa0471690:three_prime_UTR
TTCCAAAGGGATCTGCAACC+TGG 0.426271 3_3:+74074445 Msa0471690:CDS
ATATCTATGGAACGTTAATC+AGG 0.429417 3_3:+74074203 Msa0471690:CDS
GGCCAGGTTGCAGATCCCTT+TGG 0.430320 3_3:-74074447 None:intergenic
ACCCCACGCATGAGCATTGT+TGG 0.432490 3_3:-74074565 None:intergenic
TTTACCAATTAAGCATAGTT+GGG 0.432871 3_3:-74073729 None:intergenic
TCTCAAGCCTCCATAAACTT+TGG 0.434188 3_3:-74074940 None:intergenic
TTCTATTTCTCTCAACCAAA+AGG 0.435095 3_3:-74075706 None:intergenic
CTGGACGATACCCGATTCTC+AGG 0.435686 3_3:+74073185 Msa0471690:CDS
CCCATCAGGACTAAATTTCA+TGG 0.436002 3_3:-74072476 None:intergenic
TTAAATAATACCTGCCCATC+CGG 0.437117 3_3:-74073258 None:intergenic
CCGCATGATATTTGAAGTGC+AGG 0.437193 3_3:+74074907 Msa0471690:three_prime_UTR
ATGTGAGTGTGTATATATAT+GGG 0.438221 3_3:-74071062 None:intergenic
CCAATCAACAACCTGAGAAT+CGG 0.440688 3_3:-74073196 None:intergenic
ATATGTAGTTGTTTATGATC+TGG 0.444024 3_3:+74071583 Msa0471690:intron
ATTTGAAGTGCAGGGAATCC+TGG 0.454134 3_3:+74074916 Msa0471690:three_prime_UTR
GTATAACAGGGAGGGATTGT+TGG 0.454570 3_3:+74073351 Msa0471690:intron
TGGTCATTGTGACTGCAGGC+TGG 0.456531 3_3:+74074589 Msa0471690:CDS
AAATTGCACCTTCATGCGCT+TGG 0.462786 3_3:-74072450 None:intergenic
TTTCATCTTAGCAACTAAAA+GGG 0.466148 3_3:-74075251 None:intergenic
ACCATGAAATTTAGTCCTGA+TGG 0.466588 3_3:+74072475 Msa0471690:CDS
TCGGGTGTGGCAAGTGGTTG+AGG 0.469415 3_3:+74072534 Msa0471690:CDS
TACCGCAACTGATGCGTTTG+AGG 0.470561 3_3:-74074280 None:intergenic
CAATGCTCATGCGTGGGGTA+TGG 0.470834 3_3:+74074569 Msa0471690:CDS
CTAACTTTCTTAGATTTCAT+GGG 0.472148 3_3:-74074240 None:intergenic
TAGGGGCCAGTAGATTCTTG+TGG 0.472471 3_3:-74075136 None:intergenic
GATCTTTAGAAGGAAATTGT+TGG 0.473234 3_3:+74073373 Msa0471690:CDS
TGGCTACAGGTGGTGAAGAT+GGG 0.475427 3_3:+74072506 Msa0471690:CDS
GTAGCCAGATACTGCCCATC+AGG 0.476689 3_3:-74072490 None:intergenic
TCACAAGTCAGAATCCTTGA+TGG 0.477119 3_3:+74073931 Msa0471690:CDS
AGGATTGTGTAAATGTCTCT+GGG 0.480040 3_3:+74072182 Msa0471690:CDS
ACATTGGACTGCCTGTGTTA+AGG 0.480580 3_3:-74074122 None:intergenic
TTGTGACTGCAGGCTGGGAC+GGG 0.481187 3_3:+74074595 Msa0471690:CDS
AGAGGATGTTGTGTCTATTA+GGG 0.481348 3_3:+74071757 Msa0471690:CDS
AAGATGGGGTTGTTCGGGTG+TGG 0.485043 3_3:+74072521 Msa0471690:CDS
GATGGGCAGTATCTGGCTAC+AGG 0.486225 3_3:+74072493 Msa0471690:CDS
TTGTACAAAAGGGTTAAACT+TGG 0.488189 3_3:+74075383 Msa0471690:three_prime_UTR
AGGAAGCTTCTCCTCGGGCC+AGG 0.488808 3_3:-74074463 None:intergenic
AACGGTAAATAGGGCGAGAA+GGG 0.489976 3_3:+74072270 Msa0471690:CDS
ATTGTGACTGCAGGCTGGGA+CGG 0.490386 3_3:+74074594 Msa0471690:CDS
CAACTAATTAAAGGTGATGT+TGG 0.490683 3_3:-74075600 None:intergenic
CAATCAACAACCTGAGAATC+GGG 0.492398 3_3:-74073195 None:intergenic
AAATCAGTTGGTAGTTGCTA+AGG 0.492824 3_3:+74072153 Msa0471690:CDS
AGAGAAAGAAGCAGGTGGGT+TGG 0.493090 3_3:-74074394 None:intergenic
CATGATCAATCAAAATGCTA+AGG 0.496976 3_3:+74075310 Msa0471690:three_prime_UTR
ACTTCATTTCAAACGGGTAC+AGG 0.498608 3_3:-74074648 None:intergenic
ACCAGATAATCACTTGCAGC+TGG 0.500109 3_3:+74073703 Msa0471690:intron
GAAACAGGAAGCTTCTCCTC+GGG 0.503691 3_3:-74074468 None:intergenic
CGAAACAGGAAGCTTCTCCT+CGG 0.504206 3_3:-74074469 None:intergenic
AGTCACACTTCATTTCAAAC+GGG 0.505736 3_3:-74074654 None:intergenic
TCCAAATTTCCATCTTGAGA+TGG 0.506574 3_3:-74072091 None:intergenic
AAAGAGTGTGAGAGAGCGTA+GGG 0.507140 3_3:+74071865 Msa0471690:CDS
ACTGTAAAGTAAATGCTTGA+GGG 0.510241 3_3:-74072595 None:intergenic
AACATCATTGCTGCGAAAGT+CGG 0.511514 3_3:+74074509 Msa0471690:CDS
TTACAAATTTACATCAAATG+AGG 0.512209 3_3:-74075645 None:intergenic
AGTGAATCGTGACCATTGCT+TGG 0.512373 3_3:+74072951 Msa0471690:CDS
ATAAGGTAACAAGCAATTTG+AGG 0.514159 3_3:+74074983 Msa0471690:three_prime_UTR
ACGCATCAGTTGCGGTACCT+TGG 0.514857 3_3:+74074286 Msa0471690:CDS
GAAATTTGGAGAAAAGAATG+AGG 0.519213 3_3:+74072104 Msa0471690:CDS
TTCATTAGTGGATCCATAGA+CGG 0.522706 3_3:+74073150 Msa0471690:CDS
AACTTTCATCGCTTTACTTG+AGG 0.524102 3_3:+74072419 Msa0471690:CDS
ATGTTATCGACCGGATGGGC+AGG 0.526250 3_3:+74073248 Msa0471690:CDS
AATCATATGGGTAGTTTCAG+TGG 0.527946 3_3:+74071704 Msa0471690:exon
TTGATAATGATAGAGAAGAA+GGG 0.528008 3_3:+74072329 Msa0471690:CDS
TTGTGGCCATTTGTACAAAA+GGG 0.529199 3_3:+74075373 Msa0471690:three_prime_UTR
TCAGTGGAGAAGAAGATTGT+CGG 0.529362 3_3:+74071720 Msa0471690:CDS
GGGGAGGTTTATGAAGAGCA+TGG 0.530487 3_3:+74071886 Msa0471690:CDS
TAAATAGGGCGAGAAGGGGT+TGG 0.531097 3_3:+74072275 Msa0471690:CDS
AGATAGTAGTGGTTCTGAAG+AGG 0.531135 3_3:+74071982 Msa0471690:CDS
TTTGGTCCACAAGAATCTAC+TGG 0.536692 3_3:+74075130 Msa0471690:three_prime_UTR
CACTGTAAAGTAAATGCTTG+AGG 0.537714 3_3:-74072596 None:intergenic
GCTATGCAGTCTCAGGGTGT+AGG 0.538360 3_3:+74072353 Msa0471690:CDS
GTCATTGATTTGAGATCGAA+CGG 0.538995 3_3:-74074872 None:intergenic
ATAACTTTCTTGGAATCTTG+AGG 0.539357 3_3:-74073892 None:intergenic
AAATCACATTAAGCCCATCA+AGG 0.539545 3_3:-74073945 None:intergenic
GACTGCAGTATGTTATCGAC+CGG 0.543308 3_3:+74073239 Msa0471690:CDS
AGAGAGTTTGAGGATGCAGA+TGG 0.543559 3_3:+74072232 Msa0471690:CDS
TCTGGGGTGTCTCATTGTCA+AGG 0.544039 3_3:+74072199 Msa0471690:CDS
TTGATATGTTGTGGGACCAT+GGG 0.546377 3_3:+74075217 Msa0471690:three_prime_UTR
ACAAGCAATGTGATTATGAT+CGG 0.546669 3_3:+74075476 Msa0471690:three_prime_UTR
AAGTAAAGGTCCGTCAATGT+AGG 0.547509 3_3:+74072383 Msa0471690:CDS
TGTGCATCATTTACCTCAGA+CGG 0.548187 3_3:+74074144 Msa0471690:CDS
GGTATGGTCATTGTGACTGC+AGG 0.549386 3_3:+74074585 Msa0471690:CDS
GCCTCCATAAACTTTGGACC+AGG 0.549976 3_3:-74074934 None:intergenic
ATGATCAATCAAAATGCTAA+GGG 0.550174 3_3:+74075311 Msa0471690:three_prime_UTR
CCATGAAATTTAGTCCTGAT+GGG 0.550381 3_3:+74072476 Msa0471690:CDS
TGGTTCAGAGAGAAAGAAGC+AGG 0.550963 3_3:-74074402 None:intergenic
TTCCTCAAACGCATCAGTTG+CGG 0.553600 3_3:+74074278 Msa0471690:CDS
GATCAAGACAAGCTAAAGCT+TGG 0.556012 3_3:-74075089 None:intergenic
TCCAATTCCAAATCAATCGC+AGG 0.556225 3_3:+74074812 Msa0471690:three_prime_UTR
GGTCATTGTGACTGCAGGCT+GGG 0.557152 3_3:+74074590 Msa0471690:CDS
GTGGAGATTTCAAGAGTTGG+TGG 0.560027 3_3:+74075275 Msa0471690:three_prime_UTR
CACAAGTCAGAATCCTTGAT+GGG 0.560457 3_3:+74073932 Msa0471690:CDS
GAGTGATTGTTCAAATCAGT+TGG 0.560983 3_3:+74072141 Msa0471690:CDS
TAAAATATGTTTCCCGTCTG+AGG 0.561223 3_3:-74074157 None:intergenic
TACCAACAATGCTCATGCGT+GGG 0.562604 3_3:+74074563 Msa0471690:CDS
GGTTGTTCGGGTGTGGCAAG+TGG 0.564414 3_3:+74072528 Msa0471690:CDS
GCAGTATGTTATCGACCGGA+TGG 0.565468 3_3:+74073243 Msa0471690:CDS
CAAAGAGTGTGAGAGAGCGT+AGG 0.568692 3_3:+74071864 Msa0471690:CDS
ACATCACCTTTAATTAGTTG+AGG 0.571689 3_3:+74075603 Msa0471690:three_prime_UTR
TTGCCATCCATGTGATCTTG+TGG 0.572237 3_3:+74075356 Msa0471690:three_prime_UTR
CACGATTCACTTGCCATAGT+CGG 0.575462 3_3:-74072939 None:intergenic
AACCATTGCATGAGTTCCGT+GGG 0.575505 3_3:+74072746 Msa0471690:CDS
GAACGGTAAATAGGGCGAGA+AGG 0.577669 3_3:+74072269 Msa0471690:CDS
AAGGTGGAGATTTCAAGAGT+TGG 0.578139 3_3:+74075272 Msa0471690:three_prime_UTR
GCAAGAAAATCAGATTATTG+AGG 0.578747 3_3:+74075018 Msa0471690:three_prime_UTR
AAAAGAAACTTCCTGGCAGA+GGG 0.579638 3_3:+74073750 Msa0471690:CDS
TTAGTTGCTAAGATGAAAGG+TGG 0.581942 3_3:+74075256 Msa0471690:three_prime_UTR
AGTGTTGTCGATGACGAAAG+AGG 0.582292 3_3:-74071143 None:intergenic
CAAATGGCCACAAGATCACA+TGG 0.582600 3_3:-74075363 None:intergenic
GGGAGGTTTATGAAGAGCAT+GGG 0.583225 3_3:+74071887 Msa0471690:CDS
CTCTAGTGTGAGTTCTTCGG+AGG 0.585376 3_3:+74072039 Msa0471690:CDS
AAGCCAGTTATCCCTCTGCC+AGG 0.589263 3_3:-74073761 None:intergenic
AAACCATTGCATGAGTTCCG+TGG 0.589350 3_3:+74072745 Msa0471690:CDS
GGCTACAGGTGGTGAAGATG+GGG 0.590519 3_3:+74072507 Msa0471690:CDS
TAGTTGAGGTACAACTATGT+TGG 0.590934 3_3:+74075617 Msa0471690:three_prime_UTR
CAAGATATCCAAGCGCATGA+AGG 0.592474 3_3:+74072442 Msa0471690:CDS
CTGTAAAGTAAATGCTTGAG+GGG 0.592786 3_3:-74072594 None:intergenic
GAAAGAAGAAGAGATAGTAG+TGG 0.594074 3_3:+74071971 Msa0471690:CDS
TGGTGATGTGGTTACTAGAA+CGG 0.595840 3_3:+74072252 Msa0471690:CDS
AATAACTTGCCATCTCAAGA+TGG 0.595950 3_3:+74072082 Msa0471690:CDS
GGTAGTTGCTAAGGAATCTG+AGG 0.598779 3_3:+74072162 Msa0471690:CDS
GGAGGTTTCAAACCGTGCCA+AGG 0.598891 3_3:-74074303 None:intergenic
AAACTTCACTTCTATGCCCA+CGG 0.602774 3_3:-74072762 None:intergenic
GTGTAGGCTTCAGAAAGTAA+AGG 0.602811 3_3:+74072369 Msa0471690:CDS
GTGCATCATTTACCTCAGAC+GGG 0.603220 3_3:+74074145 Msa0471690:CDS
GAGGTAAATGATGCACACAT+TGG 0.603566 3_3:-74074138 None:intergenic
TAGTGGATCCATAGACGGAA+AGG 0.604269 3_3:+74073155 Msa0471690:CDS
TTTGATATGTTGTGGGACCA+TGG 0.605088 3_3:+74075216 Msa0471690:three_prime_UTR
TAACTTTCTTAGATTTCATG+GGG 0.605262 3_3:-74074239 None:intergenic
AAGAGGAATTTAGTTCATGT+CGG 0.608009 3_3:+74071999 Msa0471690:CDS
GTGAAAACACTTCCAAGCAA+TGG 0.611173 3_3:-74072963 None:intergenic
TGCCCACGGAACTCATGCAA+TGG 0.612153 3_3:-74072748 None:intergenic
AAATTTGGAGAAAAGAATGA+GGG 0.614888 3_3:+74072105 Msa0471690:CDS
AGAGTGTGAGAGAGCGTAGG+GGG 0.617428 3_3:+74071867 Msa0471690:CDS
CAGTATGTTATCGACCGGAT+GGG 0.618616 3_3:+74073244 Msa0471690:CDS
CGCATGATATTTGAAGTGCA+GGG 0.625837 3_3:+74074908 Msa0471690:three_prime_UTR
TGGCCACAAGATCACATGGA+TGG 0.626291 3_3:-74075359 None:intergenic
TCAGTTGCGGTACCTTGGCA+CGG 0.626640 3_3:+74074291 Msa0471690:CDS
TTCAGAGAGAAAGAAGCAGG+TGG 0.627337 3_3:-74074399 None:intergenic
ACAACCGGAAGATCTTAGGC+GGG 0.627533 3_3:-74072717 None:intergenic
TCCTGGTCCAAAGTTTATGG+AGG 0.631110 3_3:+74074933 Msa0471690:three_prime_UTR
AACAACACAAGCTGAATCTG+CGG 0.632119 3_3:-74072692 None:intergenic
TCAATGTAGGAAGAAAATGA+AGG 0.633828 3_3:+74072396 Msa0471690:CDS
GTACCAACAATGCTCATGCG+TGG 0.637345 3_3:+74074562 Msa0471690:CDS
GGGTTAAACTTGGAAATGTG+TGG 0.640914 3_3:+74075393 Msa0471690:three_prime_UTR
TCAGAGAGAAAGAAGCAGGT+GGG 0.641323 3_3:-74074398 None:intergenic
TGAGGATGCAGATGGTGATG+TGG 0.643720 3_3:+74072240 Msa0471690:CDS
AACAACCGGAAGATCTTAGG+CGG 0.646128 3_3:-74072718 None:intergenic
TCGAACGGTTCATATTGCAT+AGG 0.647522 3_3:-74074857 None:intergenic
GCGAAAACGATGATACAAAG+TGG 0.648362 3_3:-74071093 None:intergenic
AAGGGAGCTATGCAGTCTCA+GGG 0.648697 3_3:+74072347 Msa0471690:CDS
GGGATCTGCAACCTGGCCCG+AGG 0.648859 3_3:+74074452 Msa0471690:CDS
ACCAACAATGCTCATGCGTG+GGG 0.652027 3_3:+74074564 Msa0471690:CDS
GTAGTTGTTTATGATCTGGG+TGG 0.661232 3_3:+74071587 Msa0471690:intron
TGTAATTGCATAACAACTTG+TGG 0.663052 3_3:-74074369 None:intergenic
TGTGAGTGTGTATATATATG+GGG 0.665555 3_3:-74071061 None:intergenic
TTATTGAGGTCAATGACAAG+TGG 0.665714 3_3:+74075032 Msa0471690:three_prime_UTR
GGTGTGGCAAGTGGTTGAGG+AGG 0.668449 3_3:+74072537 Msa0471690:CDS
ACGGTAAATAGGGCGAGAAG+GGG 0.672129 3_3:+74072271 Msa0471690:CDS
AGAAAGTTAGGTCTTGTGAG+CGG 0.675224 3_3:+74074253 Msa0471690:CDS
GTTGTCGATGACGAAAGAGG+AGG 0.692457 3_3:-74071140 None:intergenic
CCTGCACTTCAAATATCATG+CGG 0.697949 3_3:-74074907 None:intergenic
GGGCAGTATCTGGCTACAGG+TGG 0.702356 3_3:+74072496 Msa0471690:CDS
ATTGAGATCGATGACGTGCG+TGG 0.720656 3_3:+74072306 Msa0471690:CDS
AAGAGTGTGAGAGAGCGTAG+GGG 0.726141 3_3:+74071866 Msa0471690:CDS
GGATTGTGTAAATGTCTCTG+GGG 0.731454 3_3:+74072183 Msa0471690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTATATTTGCTGATAT+TGG + chr3_3:74071538-74071557 Msa0471690:intron 15.0%
!! TTGAACTTAAAAAATCATAT+GGG + chr3_3:74071692-74071711 Msa0471690:exon 15.0%
!! AAAATAACTTAAATGGAATA+TGG - chr3_3:74073451-74073470 None:intergenic 15.0%
!!! GTTTTAATAATCAAAATGTT+AGG + chr3_3:74073509-74073528 Msa0471690:intron 15.0%
!! AAATGTTAATCAAGTTATAT+TGG + chr3_3:74073588-74073607 Msa0471690:intron 15.0%
!! AATGTTAATCAAGTTATATT+GGG + chr3_3:74073589-74073608 Msa0471690:intron 15.0%
!! ATAAAAACATTCCAAAATTA+CGG + chr3_3:74074621-74074640 Msa0471690:CDS 15.0%
!!! AAGTAATAGTAATATTTTGT+TGG + chr3_3:74075679-74075698 Msa0471690:three_prime_UTR 15.0%
!! TGAAAACAAAAAAACAAACA+CGG - chr3_3:74071329-74071348 None:intergenic 20.0%
!! GTTGAACTTAAAAAATCATA+TGG + chr3_3:74071691-74071710 Msa0471690:exon 20.0%
!!! AAATTCATTGTATTTTGAGA+AGG + chr3_3:74071937-74071956 Msa0471690:CDS 20.0%
!! GAATAATATGATGTATAACA+GGG + chr3_3:74073339-74073358 Msa0471690:intron 20.0%
!!! TGTTGGTTTTATAAAATATC+AGG + chr3_3:74073390-74073409 Msa0471690:CDS 20.0%
!!! ATAACTTGATTAACATTTTG+CGG - chr3_3:74073586-74073605 None:intergenic 20.0%
!!! AGAATACTATCTAAAATTTG+AGG - chr3_3:74074027-74074046 None:intergenic 20.0%
!!! GTTCATTACATTTTATTTTC+AGG + chr3_3:74074099-74074118 Msa0471690:intron 20.0%
!! TAAAAACATTCCAAAATTAC+GGG + chr3_3:74074622-74074641 Msa0471690:CDS 20.0%
!! TTGTTGTAATGTAATGTAAA+TGG + chr3_3:74075066-74075085 Msa0471690:three_prime_UTR 20.0%
!! TAACAAAAATATTCTGTACA+TGG + chr3_3:74075564-74075583 Msa0471690:three_prime_UTR 20.0%
!! TTACAAATTTACATCAAATG+AGG - chr3_3:74075648-74075667 None:intergenic 20.0%
! ATGTGAGTGTGTATATATAT+GGG - chr3_3:74071065-74071084 None:intergenic 25.0%
! TATGTGAGTGTGTATATATA+TGG - chr3_3:74071066-74071085 None:intergenic 25.0%
!! AAAGGGTATGAATAAATTGT+TGG - chr3_3:74071264-74071283 None:intergenic 25.0%
!! TCTTCTTTTTATATCATACC+TGG + chr3_3:74071368-74071387 Msa0471690:intron 25.0%
! TATATCATACCTGGTTATTA+TGG + chr3_3:74071377-74071396 Msa0471690:intron 25.0%
! TTATTACTTTCTTTGTTCTG+TGG + chr3_3:74071471-74071490 Msa0471690:intron 25.0%
! ATATGTAGTTGTTTATGATC+TGG + chr3_3:74071583-74071602 Msa0471690:intron 25.0%
! TATGTAGTTGTTTATGATCT+GGG + chr3_3:74071584-74071603 Msa0471690:intron 25.0%
! TCGTTTGAAGAGATAAAAAT+TGG + chr3_3:74071612-74071631 Msa0471690:five_prime_UTR 25.0%
!!! TTAAGTTTTTGTTTCCTTGA+AGG + chr3_3:74071656-74071675 Msa0471690:five_prime_UTR 25.0%
!!! TAAGTTTTTGTTTCCTTGAA+GGG + chr3_3:74071657-74071676 Msa0471690:five_prime_UTR 25.0%
!! ATGATGATGATGATGATAAA+GGG + chr3_3:74071795-74071814 Msa0471690:CDS 25.0%
!!! TTGATTTTGATTATGAAGTG+TGG + chr3_3:74071831-74071850 Msa0471690:CDS 25.0%
!!! TTTTGAGAAGGAAAAGATTA+TGG + chr3_3:74071949-74071968 Msa0471690:CDS 25.0%
! AAATTTGGAGAAAAGAATGA+GGG + chr3_3:74072105-74072124 Msa0471690:CDS 25.0%
!!! TTGATAATGATAGAGAAGAA+GGG + chr3_3:74072329-74072348 Msa0471690:CDS 25.0%
!! TTTTCCTTATCCATAAACAA+TGG - chr3_3:74072643-74072662 None:intergenic 25.0%
! TTTATGGATAAGGAAAAACT+TGG + chr3_3:74072646-74072665 Msa0471690:CDS 25.0%
!! CACAATTTGTTTGTATTTGA+TGG + chr3_3:74073079-74073098 Msa0471690:intron 25.0%
! ATGAAATAATCTTCATCAAC+AGG - chr3_3:74073135-74073154 None:intergenic 25.0%
! GATGAAGATTATTTCATTAG+TGG + chr3_3:74073138-74073157 Msa0471690:CDS 25.0%
! AAGCACATGTTTAAATTGAA+TGG - chr3_3:74073297-74073316 None:intergenic 25.0%
! TTTAAACATGTGCTTTATAG+AGG + chr3_3:74073302-74073321 Msa0471690:intron 25.0%
! CGAATAATATGATGTATAAC+AGG + chr3_3:74073338-74073357 Msa0471690:intron 25.0%
! AATGGAATATGGAGATATAT+GGG - chr3_3:74073440-74073459 None:intergenic 25.0%
! AAATGGAATATGGAGATATA+TGG - chr3_3:74073441-74073460 None:intergenic 25.0%
! GGGTCAAAAAATAACTTAAA+TGG - chr3_3:74073458-74073477 None:intergenic 25.0%
! TACTTCTTATTCAAAATCTG+TGG - chr3_3:74073548-74073567 None:intergenic 25.0%
! AATTGAAAACCAGAAATGTT+AGG - chr3_3:74073674-74073693 None:intergenic 25.0%
! TTTACCAATTAAGCATAGTT+GGG - chr3_3:74073732-74073751 None:intergenic 25.0%
!! TTTTACCAATTAAGCATAGT+TGG - chr3_3:74073733-74073752 None:intergenic 25.0%
!! CTTTTTCTCTGACAATTTTT+TGG + chr3_3:74073832-74073851 Msa0471690:intron 25.0%
! AATTATATGTTCTGTCACTA+AGG + chr3_3:74074077-74074096 Msa0471690:intron 25.0%
! TAACTTTCTTAGATTTCATG+GGG - chr3_3:74074242-74074261 None:intergenic 25.0%
! CTAACTTTCTTAGATTTCAT+GGG - chr3_3:74074243-74074262 None:intergenic 25.0%
!! GACATTCAATTGTTCATTTT+CGG - chr3_3:74074334-74074353 None:intergenic 25.0%
!! TTGATTCTATTTTCCAACTT+AGG - chr3_3:74074683-74074702 None:intergenic 25.0%
! CTTGAGAATGATGTTAAATT+TGG + chr3_3:74074956-74074975 Msa0471690:three_prime_UTR 25.0%
! TTGATCTTAAAGTCGTAATT+AGG + chr3_3:74075106-74075125 Msa0471690:three_prime_UTR 25.0%
!! TTAAAGTCGTAATTAGGTTT+TGG + chr3_3:74075112-74075131 Msa0471690:three_prime_UTR 25.0%
! ATGTGTTAAAAAAACTTGCA+AGG + chr3_3:74075175-74075194 Msa0471690:three_prime_UTR 25.0%
! TGTGTTAAAAAAACTTGCAA+GGG + chr3_3:74075176-74075195 Msa0471690:three_prime_UTR 25.0%
!! TATCAAAATCGTCTCTTTTA+GGG - chr3_3:74075203-74075222 None:intergenic 25.0%
!! ATATCAAAATCGTCTCTTTT+AGG - chr3_3:74075204-74075223 None:intergenic 25.0%
! TTTCATCTTAGCAACTAAAA+GGG - chr3_3:74075254-74075273 None:intergenic 25.0%
! ATGATCAATCAAAATGCTAA+GGG + chr3_3:74075311-74075330 Msa0471690:three_prime_UTR 25.0%
!! TCAATGATGATATCTCTTTT+TGG + chr3_3:74075745-74075764 Msa0471690:three_prime_UTR 25.0%
TGTGAGTGTGTATATATATG+GGG - chr3_3:74071064-74071083 None:intergenic 30.0%
AGAGTGTGTGTTTGAAAATT+AGG - chr3_3:74071174-74071193 None:intergenic 30.0%
GGTATGAATAAATTGTTGGA+AGG - chr3_3:74071260-74071279 None:intergenic 30.0%
TAAAAGCTGTGAAGACAAAA+GGG - chr3_3:74071281-74071300 None:intergenic 30.0%
TTAAAAGCTGTGAAGACAAA+AGG - chr3_3:74071282-74071301 None:intergenic 30.0%
ATACCTGGTTATTATGGATT+GGG + chr3_3:74071383-74071402 Msa0471690:intron 30.0%
!! TTGGTTTGGTTTGAATCTAT+CGG + chr3_3:74071423-74071442 Msa0471690:intron 30.0%
GAAACAAAAACTTAAGTCCT+AGG - chr3_3:74071651-74071670 None:intergenic 30.0%
!! AAGTTTTTGTTTCCTTGAAG+GGG + chr3_3:74071658-74071677 Msa0471690:five_prime_UTR 30.0%
ATCATCATCATCATCATCAT+CGG - chr3_3:74071792-74071811 None:intergenic 30.0%
! GATGATGATGATGATGATAA+AGG + chr3_3:74071794-74071813 Msa0471690:CDS 30.0%
! TGATGATGATGATGATAAAG+GGG + chr3_3:74071796-74071815 Msa0471690:CDS 30.0%
TTGATTATGAAGTGTGGATT+CGG + chr3_3:74071837-74071856 Msa0471690:CDS 30.0%
! AAGAGGAATTTAGTTCATGT+CGG + chr3_3:74071999-74072018 Msa0471690:CDS 30.0%
GAAATTTGGAGAAAAGAATG+AGG + chr3_3:74072104-74072123 Msa0471690:CDS 30.0%
ATTGATAGATAGAGAGTTTG+AGG + chr3_3:74072222-74072241 Msa0471690:CDS 30.0%
!! GTTGATAATGATAGAGAAGA+AGG + chr3_3:74072328-74072347 Msa0471690:CDS 30.0%
! TCATTTTCTTCCTACATTGA+CGG - chr3_3:74072396-74072415 None:intergenic 30.0%
TCAATGTAGGAAGAAAATGA+AGG + chr3_3:74072396-74072415 Msa0471690:CDS 30.0%
ACTGTAAAGTAAATGCTTGA+GGG - chr3_3:74072598-74072617 None:intergenic 30.0%
TCAATTGACACCATTGTTTA+TGG + chr3_3:74072630-74072649 Msa0471690:CDS 30.0%
AAGAAGATACTGCATTCAAA+AGG - chr3_3:74072896-74072915 None:intergenic 30.0%
! GTGTTTTCACACAGTAATTA+TGG + chr3_3:74072976-74072995 Msa0471690:CDS 30.0%
TAATATGATGTATAACAGGG+AGG + chr3_3:74073342-74073361 Msa0471690:intron 30.0%
AATATGATGTATAACAGGGA+GGG + chr3_3:74073343-74073362 Msa0471690:intron 30.0%
! GATCTTTAGAAGGAAATTGT+TGG + chr3_3:74073373-74073392 Msa0471690:CDS 30.0%
!!! TTTTTTGACCCTTCGATTTT+TGG + chr3_3:74073467-74073486 Msa0471690:intron 30.0%
ATTGGTAAAAAGAAACTTCC+TGG + chr3_3:74073743-74073762 Msa0471690:CDS 30.0%
ATAACTTTCTTGGAATCTTG+AGG - chr3_3:74073895-74073914 None:intergenic 30.0%
TCAAGATTCCAAGAAAGTTA+TGG + chr3_3:74073894-74073913 Msa0471690:CDS 30.0%
ACATGTAACCATAACTTTCT+TGG - chr3_3:74073905-74073924 None:intergenic 30.0%
AGTATGTAGGGATTTAACAA+AGG - chr3_3:74073990-74074009 None:intergenic 30.0%
AGGACTCTAATGTATATCTA+TGG + chr3_3:74074190-74074209 Msa0471690:CDS 30.0%
ATATCTATGGAACGTTAATC+AGG + chr3_3:74074203-74074222 Msa0471690:CDS 30.0%
CCTAACTTTCTTAGATTTCA+TGG - chr3_3:74074244-74074263 None:intergenic 30.0%
CCATGAAATCTAAGAAAGTT+AGG + chr3_3:74074241-74074260 Msa0471690:CDS 30.0%
! AATTGTTCATTTTCGGAGAT+TGG - chr3_3:74074327-74074346 None:intergenic 30.0%
TGTAATTGCATAACAACTTG+TGG - chr3_3:74074372-74074391 None:intergenic 30.0%
!!! TCTGAACCAAGATTTTTTCT+TGG + chr3_3:74074416-74074435 Msa0471690:CDS 30.0%
AAGACTCCAAGAAAAAATCT+TGG - chr3_3:74074425-74074444 None:intergenic 30.0%
!!! CAATGATGTTTTTTTGGTCT+TGG - chr3_3:74074499-74074518 None:intergenic 30.0%
AAGTCACACTTCATTTCAAA+CGG - chr3_3:74074658-74074677 None:intergenic 30.0%
ATCAAGATTCATTGCTTTGT+TGG + chr3_3:74074698-74074717 Msa0471690:three_prime_UTR 30.0%
! TGTAGCATGTAGTTTTCTAA+AGG - chr3_3:74074733-74074752 None:intergenic 30.0%
ACTACATGCTACAAAGTTTA+TGG + chr3_3:74074740-74074759 Msa0471690:three_prime_UTR 30.0%
TATCATGCGGTAATCAATTT+CGG - chr3_3:74074897-74074916 None:intergenic 30.0%
ATGTTAAATTTGGCAGCATA+AGG + chr3_3:74074966-74074985 Msa0471690:three_prime_UTR 30.0%
ATAAGGTAACAAGCAATTTG+AGG + chr3_3:74074983-74075002 Msa0471690:three_prime_UTR 30.0%
! TAATCTGATTTTCTTGCACA+TGG - chr3_3:74075015-74075034 None:intergenic 30.0%
GCAAGAAAATCAGATTATTG+AGG + chr3_3:74075018-74075037 Msa0471690:three_prime_UTR 30.0%
! ATGACTTTGCATCTCTTTTA+GGG - chr3_3:74075157-74075176 None:intergenic 30.0%
!! AGACGATTTTGATATGTTGT+GGG + chr3_3:74075209-74075228 Msa0471690:three_prime_UTR 30.0%
CTTTCATCTTAGCAACTAAA+AGG - chr3_3:74075255-74075274 None:intergenic 30.0%
!! CTTTTAGTTGCTAAGATGAA+AGG + chr3_3:74075253-74075272 Msa0471690:three_prime_UTR 30.0%
CATGATCAATCAAAATGCTA+AGG + chr3_3:74075310-74075329 Msa0471690:three_prime_UTR 30.0%
! GTTTAACCCTTTTGTACAAA+TGG - chr3_3:74075382-74075401 None:intergenic 30.0%
TTGTACAAAAGGGTTAAACT+TGG + chr3_3:74075383-74075402 Msa0471690:three_prime_UTR 30.0%
ACAAGCAATGTGATTATGAT+CGG + chr3_3:74075476-74075495 Msa0471690:three_prime_UTR 30.0%
CAACTAATTAAAGGTGATGT+TGG - chr3_3:74075603-74075622 None:intergenic 30.0%
ACATCACCTTTAATTAGTTG+AGG + chr3_3:74075603-74075622 Msa0471690:three_prime_UTR 30.0%
GTTGTACCTCAACTAATTAA+AGG - chr3_3:74075612-74075631 None:intergenic 30.0%
!!! TATTTTGTTGGTTTGCCTTT+TGG + chr3_3:74075691-74075710 Msa0471690:three_prime_UTR 30.0%
! TTCTATTTCTCTCAACCAAA+AGG - chr3_3:74075709-74075728 None:intergenic 30.0%
AAAGAGGAGGAAGCAAAAAT+GGG - chr3_3:74071130-74071149 None:intergenic 35.0%
ACAAACACGGAGATTGAAAA+CGG - chr3_3:74071316-74071335 None:intergenic 35.0%
CATACCTGGTTATTATGGAT+TGG + chr3_3:74071382-74071401 Msa0471690:intron 35.0%
!! TTATGGATTGGGATCTATGT+TGG + chr3_3:74071394-74071413 Msa0471690:intron 35.0%
!! TATGTTGGATTGGATTGGTT+TGG + chr3_3:74071409-74071428 Msa0471690:intron 35.0%
!! AGTTTTTGTTTCCTTGAAGG+GGG + chr3_3:74071659-74071678 Msa0471690:five_prime_UTR 35.0%
AATCATATGGGTAGTTTCAG+TGG + chr3_3:74071704-74071723 Msa0471690:exon 35.0%
AAGAGGATGTTGTGTCTATT+AGG + chr3_3:74071756-74071775 Msa0471690:CDS 35.0%
AGAGGATGTTGTGTCTATTA+GGG + chr3_3:74071757-74071776 Msa0471690:CDS 35.0%
GAAAGAAGAAGAGATAGTAG+TGG + chr3_3:74071971-74071990 Msa0471690:CDS 35.0%
! AATAACTTGCCATCTCAAGA+TGG + chr3_3:74072082-74072101 Msa0471690:CDS 35.0%
TCCAAATTTCCATCTTGAGA+TGG - chr3_3:74072094-74072113 None:intergenic 35.0%
GAGTGATTGTTCAAATCAGT+TGG + chr3_3:74072141-74072160 Msa0471690:CDS 35.0%
!! AAATCAGTTGGTAGTTGCTA+AGG + chr3_3:74072153-74072172 Msa0471690:CDS 35.0%
AGGATTGTGTAAATGTCTCT+GGG + chr3_3:74072182-74072201 Msa0471690:CDS 35.0%
TGGTTACTAGAACGGTAAAT+AGG + chr3_3:74072260-74072279 Msa0471690:CDS 35.0%
GGTTACTAGAACGGTAAATA+GGG + chr3_3:74072261-74072280 Msa0471690:CDS 35.0%
AACTTTCATCGCTTTACTTG+AGG + chr3_3:74072419-74072438 Msa0471690:CDS 35.0%
ACCATGAAATTTAGTCCTGA+TGG + chr3_3:74072475-74072494 Msa0471690:CDS 35.0%
CCATGAAATTTAGTCCTGAT+GGG + chr3_3:74072476-74072495 Msa0471690:CDS 35.0%
CTGTAAAGTAAATGCTTGAG+GGG - chr3_3:74072597-74072616 None:intergenic 35.0%
CACTGTAAAGTAAATGCTTG+AGG - chr3_3:74072599-74072618 None:intergenic 35.0%
GACACCATTGTTTATGGATA+AGG + chr3_3:74072636-74072655 Msa0471690:CDS 35.0%
! GCATTTCTATTCCGATTTGT+AGG + chr3_3:74073010-74073029 Msa0471690:intron 35.0%
ACCTAAAGAAGCCTACAAAT+CGG - chr3_3:74073024-74073043 None:intergenic 35.0%
CTGTTGTGGTCAAACAAATT+AGG - chr3_3:74073052-74073071 None:intergenic 35.0%
AATTGTGAGATGAACTGTTG+TGG - chr3_3:74073066-74073085 None:intergenic 35.0%
! TTCATTAGTGGATCCATAGA+CGG + chr3_3:74073150-74073169 Msa0471690:CDS 35.0%
TTAAATAATACCTGCCCATC+CGG - chr3_3:74073261-74073280 None:intergenic 35.0%
!! CAGAAGTACCAAAAATCGAA+GGG - chr3_3:74073478-74073497 None:intergenic 35.0%
!! TCAGAAGTACCAAAAATCGA+AGG - chr3_3:74073479-74073498 None:intergenic 35.0%
AATCACTTAAGACTTGAGCT+TGG + chr3_3:74073647-74073666 Msa0471690:intron 35.0%
GATTCCCAACTATGCTTAAT+TGG + chr3_3:74073725-74073744 Msa0471690:CDS 35.0%
AAATCACATTAAGCCCATCA+AGG - chr3_3:74073948-74073967 None:intergenic 35.0%
GCGAAATCAACAAGTATGTA+GGG - chr3_3:74074002-74074021 None:intergenic 35.0%
TGCGAAATCAACAAGTATGT+AGG - chr3_3:74074003-74074022 None:intergenic 35.0%
!! TTATTTTCAGGCCTTAACAC+AGG + chr3_3:74074111-74074130 Msa0471690:intron 35.0%
TAAAATATGTTTCCCGTCTG+AGG - chr3_3:74074160-74074179 None:intergenic 35.0%
! ACATATTTTATCAGCATGCG+AGG + chr3_3:74074170-74074189 Msa0471690:CDS 35.0%
! TTTCTTGGAGTCTTTTCCAA+AGG + chr3_3:74074431-74074450 Msa0471690:CDS 35.0%
! TTCTTGGAGTCTTTTCCAAA+GGG + chr3_3:74074432-74074451 Msa0471690:CDS 35.0%
!!! TCGCAGCAATGATGTTTTTT+TGG - chr3_3:74074505-74074524 None:intergenic 35.0%
AGTCACACTTCATTTCAAAC+GGG - chr3_3:74074657-74074676 None:intergenic 35.0%
! AAGTGTGACTTTTCCTAAGT+TGG + chr3_3:74074667-74074686 Msa0471690:three_prime_UTR 35.0%
AAATGATCCTGCGATTGATT+TGG - chr3_3:74074822-74074841 None:intergenic 35.0%
!! GTCATTGATTTGAGATCGAA+CGG - chr3_3:74074875-74074894 None:intergenic 35.0%
TTATTGAGGTCAATGACAAG+TGG + chr3_3:74075032-74075051 Msa0471690:three_prime_UTR 35.0%
! TGACTTTGCATCTCTTTTAG+GGG - chr3_3:74075156-74075175 None:intergenic 35.0%
! CATGACTTTGCATCTCTTTT+AGG - chr3_3:74075158-74075177 None:intergenic 35.0%
!! GAGACGATTTTGATATGTTG+TGG + chr3_3:74075208-74075227 Msa0471690:three_prime_UTR 35.0%
! GCAACTAAAAGGGTTTTCAA+AGG - chr3_3:74075244-74075263 None:intergenic 35.0%
TTAGTTGCTAAGATGAAAGG+TGG + chr3_3:74075256-74075275 Msa0471690:three_prime_UTR 35.0%
TTGTGGCCATTTGTACAAAA+GGG + chr3_3:74075373-74075392 Msa0471690:three_prime_UTR 35.0%
!! GTGATTATGATCGGTTTTAG+TGG + chr3_3:74075485-74075504 Msa0471690:three_prime_UTR 35.0%
! CTGTACATGGTCTCAATTTT+AGG + chr3_3:74075577-74075596 Msa0471690:three_prime_UTR 35.0%
TAGTTGAGGTACAACTATGT+TGG + chr3_3:74075617-74075636 Msa0471690:three_prime_UTR 35.0%
!! GATATCTCTTTTTGGTCATC+AGG + chr3_3:74075753-74075772 Msa0471690:three_prime_UTR 35.0%
GCGAAAACGATGATACAAAG+TGG - chr3_3:74071096-74071115 None:intergenic 40.0%
GAAAGAGGAGGAAGCAAAAA+TGG - chr3_3:74071131-74071150 None:intergenic 40.0%
GATCCCAATCCATAATAACC+AGG - chr3_3:74071389-74071408 None:intergenic 40.0%
GATTGGGATCTATGTTGGAT+TGG + chr3_3:74071399-74071418 Msa0471690:intron 40.0%
! GGATCTATGTTGGATTGGAT+TGG + chr3_3:74071404-74071423 Msa0471690:intron 40.0%
GTAGTTGTTTATGATCTGGG+TGG + chr3_3:74071587-74071606 Msa0471690:intron 40.0%
!! TTGGATTTTGACGCATTCCT+AGG + chr3_3:74071631-74071650 Msa0471690:five_prime_UTR 40.0%
TCAGTGGAGAAGAAGATTGT+CGG + chr3_3:74071720-74071739 Msa0471690:CDS 40.0%
!!! TCGGTTTTTTGATGCTGAAG+AGG + chr3_3:74071739-74071758 Msa0471690:CDS 40.0%
!! AGATAGTAGTGGTTCTGAAG+AGG + chr3_3:74071982-74072001 Msa0471690:CDS 40.0%
TTGCTCTAGTGTGAGTTCTT+CGG + chr3_3:74072036-74072055 Msa0471690:CDS 40.0%
! TTCGGAGGAATTTGGTTTAG+TGG + chr3_3:74072054-74072073 Msa0471690:CDS 40.0%
GCCATCTCAAGATGGAAATT+TGG + chr3_3:74072090-74072109 Msa0471690:CDS 40.0%
GAGGATTGTGTAAATGTCTC+TGG + chr3_3:74072181-74072200 Msa0471690:CDS 40.0%
GGATTGTGTAAATGTCTCTG+GGG + chr3_3:74072183-74072202 Msa0471690:CDS 40.0%
! TGGTGATGTGGTTACTAGAA+CGG + chr3_3:74072252-74072271 Msa0471690:CDS 40.0%
GTGTAGGCTTCAGAAAGTAA+AGG + chr3_3:74072369-74072388 Msa0471690:CDS 40.0%
AAGTAAAGGTCCGTCAATGT+AGG + chr3_3:74072383-74072402 Msa0471690:CDS 40.0%
CCCATCAGGACTAAATTTCA+TGG - chr3_3:74072479-74072498 None:intergenic 40.0%
AACAACACAAGCTGAATCTG+CGG - chr3_3:74072695-74072714 None:intergenic 40.0%
! GCAATGGTTTTTCCAACAAC+CGG - chr3_3:74072735-74072754 None:intergenic 40.0%
AAACTTCACTTCTATGCCCA+CGG - chr3_3:74072765-74072784 None:intergenic 40.0%
! TGGGCATAGAAGTGAAGTTT+TGG + chr3_3:74072765-74072784 Msa0471690:CDS 40.0%
!!! GTGAAGTTTTGGATCTCTCT+TGG + chr3_3:74072776-74072795 Msa0471690:CDS 40.0%
GTGAAAACACTTCCAAGCAA+TGG - chr3_3:74072966-74072985 None:intergenic 40.0%
! TCCGATTTGTAGGCTTCTTT+AGG + chr3_3:74073020-74073039 Msa0471690:intron 40.0%
CAATCAACAACCTGAGAATC+GGG - chr3_3:74073198-74073217 None:intergenic 40.0%
CCAATCAACAACCTGAGAAT+CGG - chr3_3:74073199-74073218 None:intergenic 40.0%
GGGATTGTTGGATCTTTAGA+AGG + chr3_3:74073363-74073382 Msa0471690:CDS 40.0%
AAAAAGAAACTTCCTGGCAG+AGG + chr3_3:74073749-74073768 Msa0471690:CDS 40.0%
AAAAGAAACTTCCTGGCAGA+GGG + chr3_3:74073750-74073769 Msa0471690:CDS 40.0%
TCACAAGTCAGAATCCTTGA+TGG + chr3_3:74073931-74073950 Msa0471690:CDS 40.0%
CACAAGTCAGAATCCTTGAT+GGG + chr3_3:74073932-74073951 Msa0471690:CDS 40.0%
GAGGTAAATGATGCACACAT+TGG - chr3_3:74074141-74074160 None:intergenic 40.0%
TGTGCATCATTTACCTCAGA+CGG + chr3_3:74074144-74074163 Msa0471690:CDS 40.0%
! AGAAAGTTAGGTCTTGTGAG+CGG + chr3_3:74074253-74074272 Msa0471690:CDS 40.0%
! TGTTCATTTTCGGAGATTGG+AGG - chr3_3:74074324-74074343 None:intergenic 40.0%
AACATCATTGCTGCGAAAGT+CGG + chr3_3:74074509-74074528 Msa0471690:CDS 40.0%
ACTTCATTTCAAACGGGTAC+AGG - chr3_3:74074651-74074670 None:intergenic 40.0%
TCCAATTCCAAATCAATCGC+AGG + chr3_3:74074812-74074831 Msa0471690:three_prime_UTR 40.0%
!! TCCTGCGATTGATTTGGAAT+TGG - chr3_3:74074816-74074835 None:intergenic 40.0%
TCGAACGGTTCATATTGCAT+AGG - chr3_3:74074860-74074879 None:intergenic 40.0%
CCTGCACTTCAAATATCATG+CGG - chr3_3:74074910-74074929 None:intergenic 40.0%
! CGCATGATATTTGAAGTGCA+GGG + chr3_3:74074908-74074927 Msa0471690:three_prime_UTR 40.0%
GAATCCTGGTCCAAAGTTTA+TGG + chr3_3:74074930-74074949 Msa0471690:three_prime_UTR 40.0%
TCTCAAGCCTCCATAAACTT+TGG - chr3_3:74074943-74074962 None:intergenic 40.0%
GATCAAGACAAGCTAAAGCT+TGG - chr3_3:74075092-74075111 None:intergenic 40.0%
TTTGGTCCACAAGAATCTAC+TGG + chr3_3:74075130-74075149 Msa0471690:three_prime_UTR 40.0%
TTTGATATGTTGTGGGACCA+TGG + chr3_3:74075216-74075235 Msa0471690:three_prime_UTR 40.0%
TTGATATGTTGTGGGACCAT+GGG + chr3_3:74075217-74075236 Msa0471690:three_prime_UTR 40.0%
AAGGTGGAGATTTCAAGAGT+TGG + chr3_3:74075272-74075291 Msa0471690:three_prime_UTR 40.0%
GATCACATGGATGGCAAAAT+TGG - chr3_3:74075353-74075372 None:intergenic 40.0%
CTTGTGGCCATTTGTACAAA+AGG + chr3_3:74075372-74075391 Msa0471690:three_prime_UTR 40.0%
GGGTTAAACTTGGAAATGTG+TGG + chr3_3:74075393-74075412 Msa0471690:three_prime_UTR 40.0%
AGTGTTGTCGATGACGAAAG+AGG - chr3_3:74071146-74071165 None:intergenic 45.0%
AACACGGAGATTGAAAACGG+TGG - chr3_3:74071313-74071332 None:intergenic 45.0%
TTCCTTGAAGGGGGATTTCA+TGG + chr3_3:74071668-74071687 Msa0471690:five_prime_UTR 45.0%
TCCTTGAAGGGGGATTTCAT+GGG + chr3_3:74071669-74071688 Msa0471690:five_prime_UTR 45.0%
! AAAGAGTGTGAGAGAGCGTA+GGG + chr3_3:74071865-74071884 Msa0471690:CDS 45.0%
! GGGAGGTTTATGAAGAGCAT+GGG + chr3_3:74071887-74071906 Msa0471690:CDS 45.0%
GTGAGTTCTTCGGAGGAATT+TGG + chr3_3:74072046-74072065 Msa0471690:CDS 45.0%
GGTAGTTGCTAAGGAATCTG+AGG + chr3_3:74072162-74072181 Msa0471690:CDS 45.0%
AGAGAGTTTGAGGATGCAGA+TGG + chr3_3:74072232-74072251 Msa0471690:CDS 45.0%
AACGGTAAATAGGGCGAGAA+GGG + chr3_3:74072270-74072289 Msa0471690:CDS 45.0%
CAAGATATCCAAGCGCATGA+AGG + chr3_3:74072442-74072461 Msa0471690:CDS 45.0%
AAATTGCACCTTCATGCGCT+TGG - chr3_3:74072453-74072472 None:intergenic 45.0%
ATGCTTGAGGGGTCAATTTC+AGG - chr3_3:74072586-74072605 None:intergenic 45.0%
! TTTTCCCGCCTAAGATCTTC+CGG + chr3_3:74072713-74072732 Msa0471690:CDS 45.0%
AACAACCGGAAGATCTTAGG+CGG - chr3_3:74072721-74072740 None:intergenic 45.0%
TCCAACAACCGGAAGATCTT+AGG - chr3_3:74072724-74072743 None:intergenic 45.0%
AAACCATTGCATGAGTTCCG+TGG + chr3_3:74072745-74072764 Msa0471690:CDS 45.0%
AACCATTGCATGAGTTCCGT+GGG + chr3_3:74072746-74072765 Msa0471690:CDS 45.0%
CTGACAAAACTGTCCGACTA+TGG + chr3_3:74072926-74072945 Msa0471690:CDS 45.0%
CACGATTCACTTGCCATAGT+CGG - chr3_3:74072942-74072961 None:intergenic 45.0%
AGTGAATCGTGACCATTGCT+TGG + chr3_3:74072951-74072970 Msa0471690:CDS 45.0%
! TAGTGGATCCATAGACGGAA+AGG + chr3_3:74073155-74073174 Msa0471690:CDS 45.0%
! CCGATTCTCAGGTTGTTGAT+TGG + chr3_3:74073196-74073215 Msa0471690:CDS 45.0%
GACTGCAGTATGTTATCGAC+CGG + chr3_3:74073239-74073258 Msa0471690:CDS 45.0%
CAGTATGTTATCGACCGGAT+GGG + chr3_3:74073244-74073263 Msa0471690:CDS 45.0%
GTATAACAGGGAGGGATTGT+TGG + chr3_3:74073351-74073370 Msa0471690:intron 45.0%
GAGCTTGGTCCTAACATTTC+TGG + chr3_3:74073662-74073681 Msa0471690:intron 45.0%
ACCAGATAATCACTTGCAGC+TGG + chr3_3:74073703-74073722 Msa0471690:intron 45.0%
TCCAGCTGCAAGTGATTATC+TGG - chr3_3:74073707-74073726 None:intergenic 45.0%
ACATTGGACTGCCTGTGTTA+AGG - chr3_3:74074125-74074144 None:intergenic 45.0%
GTGCATCATTTACCTCAGAC+GGG + chr3_3:74074145-74074164 Msa0471690:CDS 45.0%
TTCCTCAAACGCATCAGTTG+CGG + chr3_3:74074278-74074297 Msa0471690:CDS 45.0%
TCAGAGAGAAAGAAGCAGGT+GGG - chr3_3:74074401-74074420 None:intergenic 45.0%
TTCAGAGAGAAAGAAGCAGG+TGG - chr3_3:74074402-74074421 None:intergenic 45.0%
TGGTTCAGAGAGAAAGAAGC+AGG - chr3_3:74074405-74074424 None:intergenic 45.0%
TACCAACAATGCTCATGCGT+GGG + chr3_3:74074563-74074582 Msa0471690:CDS 45.0%
! GTACAGGTAGCCCGTAATTT+TGG - chr3_3:74074635-74074654 None:intergenic 45.0%
! CCGCATGATATTTGAAGTGC+AGG + chr3_3:74074907-74074926 Msa0471690:three_prime_UTR 45.0%
! ATTTGAAGTGCAGGGAATCC+TGG + chr3_3:74074916-74074935 Msa0471690:three_prime_UTR 45.0%
TCCTGGTCCAAAGTTTATGG+AGG + chr3_3:74074933-74074952 Msa0471690:three_prime_UTR 45.0%
! AAGGGTTTTCAAAGGTCCCA+TGG - chr3_3:74075236-74075255 None:intergenic 45.0%
GTGGAGATTTCAAGAGTTGG+TGG + chr3_3:74075275-74075294 Msa0471690:three_prime_UTR 45.0%
TTGCCATCCATGTGATCTTG+TGG + chr3_3:74075356-74075375 Msa0471690:three_prime_UTR 45.0%
CAAATGGCCACAAGATCACA+TGG - chr3_3:74075366-74075385 None:intergenic 45.0%
!!! TGTGTGGCAGTTGTTTTTGC+TGG + chr3_3:74075409-74075428 Msa0471690:three_prime_UTR 45.0%
AGTGGCTCGAAGTCTTTGTT+TGG + chr3_3:74075503-74075522 Msa0471690:three_prime_UTR 45.0%
GTTGTCGATGACGAAAGAGG+AGG - chr3_3:74071143-74071162 None:intergenic 50.0%
ACCCATGAAATCCCCCTTCA+AGG - chr3_3:74071673-74071692 None:intergenic 50.0%
CTACGCTCTCTCACACTCTT+TGG - chr3_3:74071866-74071885 None:intergenic 50.0%
! CAAAGAGTGTGAGAGAGCGT+AGG + chr3_3:74071864-74071883 Msa0471690:CDS 50.0%
! AAGAGTGTGAGAGAGCGTAG+GGG + chr3_3:74071866-74071885 Msa0471690:CDS 50.0%
GGGGAGGTTTATGAAGAGCA+TGG + chr3_3:74071886-74071905 Msa0471690:CDS 50.0%
CTCTAGTGTGAGTTCTTCGG+AGG + chr3_3:74072039-74072058 Msa0471690:CDS 50.0%
! TCTGGGGTGTCTCATTGTCA+AGG + chr3_3:74072199-74072218 Msa0471690:CDS 50.0%
! TGAGGATGCAGATGGTGATG+TGG + chr3_3:74072240-74072259 Msa0471690:CDS 50.0%
GAACGGTAAATAGGGCGAGA+AGG + chr3_3:74072269-74072288 Msa0471690:CDS 50.0%
ACGGTAAATAGGGCGAGAAG+GGG + chr3_3:74072271-74072290 Msa0471690:CDS 50.0%
TAAATAGGGCGAGAAGGGGT+TGG + chr3_3:74072275-74072294 Msa0471690:CDS 50.0%
ATTGAGATCGATGACGTGCG+TGG + chr3_3:74072306-74072325 Msa0471690:CDS 50.0%
AAGGGAGCTATGCAGTCTCA+GGG + chr3_3:74072347-74072366 Msa0471690:CDS 50.0%
! TAGTCCTGATGGGCAGTATC+TGG + chr3_3:74072486-74072505 Msa0471690:CDS 50.0%
TGGCTACAGGTGGTGAAGAT+GGG + chr3_3:74072506-74072525 Msa0471690:CDS 50.0%
GTGGTGAAGATGGGGTTGTT+CGG + chr3_3:74072515-74072534 Msa0471690:CDS 50.0%
TGGTGAAGATGGGGTTGTTC+GGG + chr3_3:74072516-74072535 Msa0471690:CDS 50.0%
GCGGTCTTTCTCATGCTCTT+CGG - chr3_3:74072676-74072695 None:intergenic 50.0%
ACAACCGGAAGATCTTAGGC+GGG - chr3_3:74072720-74072739 None:intergenic 50.0%
GCCTAAGATCTTCCGGTTGT+TGG + chr3_3:74072720-74072739 Msa0471690:CDS 50.0%
GCAGTATGTTATCGACCGGA+TGG + chr3_3:74073243-74073262 Msa0471690:CDS 50.0%
!! CAGAGGGATAACTGGCTTTC+AGG + chr3_3:74073766-74073785 Msa0471690:CDS 50.0%
TACCGCAACTGATGCGTTTG+AGG - chr3_3:74074283-74074302 None:intergenic 50.0%
!! AGAAAGAAGCAGGTGGGTTG+GGG - chr3_3:74074395-74074414 None:intergenic 50.0%
! GAGAAAGAAGCAGGTGGGTT+GGG - chr3_3:74074396-74074415 None:intergenic 50.0%
AGAGAAAGAAGCAGGTGGGT+TGG - chr3_3:74074397-74074416 None:intergenic 50.0%
TTCCAAAGGGATCTGCAACC+TGG + chr3_3:74074445-74074464 Msa0471690:CDS 50.0%
GAAACAGGAAGCTTCTCCTC+GGG - chr3_3:74074471-74074490 None:intergenic 50.0%
CGAAACAGGAAGCTTCTCCT+CGG - chr3_3:74074472-74074491 None:intergenic 50.0%
CGAGGAGAAGCTTCCTGTTT+CGG + chr3_3:74074470-74074489 Msa0471690:CDS 50.0%
GAGGAGAAGCTTCCTGTTTC+GGG + chr3_3:74074471-74074490 Msa0471690:CDS 50.0%
GTACCAACAATGCTCATGCG+TGG + chr3_3:74074562-74074581 Msa0471690:CDS 50.0%
ACCAACAATGCTCATGCGTG+GGG + chr3_3:74074564-74074583 Msa0471690:CDS 50.0%
GGTATGGTCATTGTGACTGC+AGG + chr3_3:74074585-74074604 Msa0471690:CDS 50.0%
GCCTCCATAAACTTTGGACC+AGG - chr3_3:74074937-74074956 None:intergenic 50.0%
TAGGGGCCAGTAGATTCTTG+TGG - chr3_3:74075139-74075158 None:intergenic 50.0%
TGGCCACAAGATCACATGGA+TGG - chr3_3:74075362-74075381 None:intergenic 50.0%
! AGAGTGTGAGAGAGCGTAGG+GGG + chr3_3:74071867-74071886 Msa0471690:CDS 55.0%
GAAGGGAGCTATGCAGTCTC+AGG + chr3_3:74072346-74072365 Msa0471690:CDS 55.0%
GCTATGCAGTCTCAGGGTGT+AGG + chr3_3:74072353-74072372 Msa0471690:CDS 55.0%
GTAGCCAGATACTGCCCATC+AGG - chr3_3:74072493-74072512 None:intergenic 55.0%
GATGGGCAGTATCTGGCTAC+AGG + chr3_3:74072493-74072512 Msa0471690:CDS 55.0%
CTGGCTACAGGTGGTGAAGA+TGG + chr3_3:74072505-74072524 Msa0471690:CDS 55.0%
GGCTACAGGTGGTGAAGATG+GGG + chr3_3:74072507-74072526 Msa0471690:CDS 55.0%
AAGATGGGGTTGTTCGGGTG+TGG + chr3_3:74072521-74072540 Msa0471690:CDS 55.0%
TGCCCACGGAACTCATGCAA+TGG - chr3_3:74072751-74072770 None:intergenic 55.0%
GATGCGCACCTTTCCGTCTA+TGG - chr3_3:74073166-74073185 None:intergenic 55.0%
! TAGACGGAAAGGTGCGCATC+TGG + chr3_3:74073166-74073185 Msa0471690:CDS 55.0%
CTGGACGATACCCGATTCTC+AGG + chr3_3:74073185-74073204 Msa0471690:CDS 55.0%
ATGTTATCGACCGGATGGGC+AGG + chr3_3:74073248-74073267 Msa0471690:CDS 55.0%
CTTCCTGGCAGAGGGATAAC+TGG + chr3_3:74073758-74073777 Msa0471690:CDS 55.0%
AAGCCAGTTATCCCTCTGCC+AGG - chr3_3:74073764-74073783 None:intergenic 55.0%
ACGCATCAGTTGCGGTACCT+TGG + chr3_3:74074286-74074305 Msa0471690:CDS 55.0%
TCAGTTGCGGTACCTTGGCA+CGG + chr3_3:74074291-74074310 Msa0471690:CDS 55.0%
GGAGGTTTCAAACCGTGCCA+AGG - chr3_3:74074306-74074325 None:intergenic 55.0%
!! TTGGTCTTGGAGCCCGAAAC+AGG - chr3_3:74074486-74074505 None:intergenic 55.0%
! ACCCCACGCATGAGCATTGT+TGG - chr3_3:74074568-74074587 None:intergenic 55.0%
CAATGCTCATGCGTGGGGTA+TGG + chr3_3:74074569-74074588 Msa0471690:CDS 55.0%
TGGTCATTGTGACTGCAGGC+TGG + chr3_3:74074589-74074608 Msa0471690:CDS 55.0%
GGTCATTGTGACTGCAGGCT+GGG + chr3_3:74074590-74074609 Msa0471690:CDS 55.0%
ATTGTGACTGCAGGCTGGGA+CGG + chr3_3:74074594-74074613 Msa0471690:CDS 55.0%
GGGCAGTATCTGGCTACAGG+TGG + chr3_3:74072496-74072515 Msa0471690:CDS 60.0%
GGTTGTTCGGGTGTGGCAAG+TGG + chr3_3:74072528-74072547 Msa0471690:CDS 60.0%
TCGGGTGTGGCAAGTGGTTG+AGG + chr3_3:74072534-74072553 Msa0471690:CDS 60.0%
GGTGTGGCAAGTGGTTGAGG+AGG + chr3_3:74072537-74072556 Msa0471690:CDS 60.0%
GGCCAGGTTGCAGATCCCTT+TGG - chr3_3:74074450-74074469 None:intergenic 60.0%
TTGTGACTGCAGGCTGGGAC+GGG + chr3_3:74074595-74074614 Msa0471690:CDS 60.0%
! GTGTGAGAGAGCGTAGGGGG+AGG + chr3_3:74071870-74071889 Msa0471690:CDS 65.0%
AGGAAGCTTCTCCTCGGGCC+AGG - chr3_3:74074466-74074485 None:intergenic 65.0%
GGGATCTGCAACCTGGCCCG+AGG + chr3_3:74074452-74074471 Msa0471690:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 74071047 74075823 74071047 ID=Msa0471690;Name=Msa0471690
chr3_3 mRNA 74071047 74075823 74071047 ID=Msa0471690-mRNA-1;Parent=Msa0471690;Name=Msa0471690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=288|1|1|1|0.85|0.75|8|1161|705
chr3_3 exon 74071047 74071215 74071047 ID=Msa0471690-mRNA-1:exon:18848;Parent=Msa0471690-mRNA-1
chr3_3 exon 74071591 74072810 74071591 ID=Msa0471690-mRNA-1:exon:18849;Parent=Msa0471690-mRNA-1
chr3_3 exon 74072907 74072997 74072907 ID=Msa0471690-mRNA-1:exon:18850;Parent=Msa0471690-mRNA-1
chr3_3 exon 74073112 74073269 74073112 ID=Msa0471690-mRNA-1:exon:18851;Parent=Msa0471690-mRNA-1
chr3_3 exon 74073360 74073411 74073360 ID=Msa0471690-mRNA-1:exon:18852;Parent=Msa0471690-mRNA-1
chr3_3 exon 74073708 74073787 74073708 ID=Msa0471690-mRNA-1:exon:18853;Parent=Msa0471690-mRNA-1
chr3_3 exon 74073886 74073979 74073886 ID=Msa0471690-mRNA-1:exon:18854;Parent=Msa0471690-mRNA-1
chr3_3 exon 74074121 74075823 74074121 ID=Msa0471690-mRNA-1:exon:18855;Parent=Msa0471690-mRNA-1
chr3_3 five_prime_UTR 74071047 74071215 74071047 ID=Msa0471690-mRNA-1:five_prime_utr;Parent=Msa0471690-mRNA-1
chr3_3 five_prime_UTR 74071591 74071709 74071591 ID=Msa0471690-mRNA-1:five_prime_utr;Parent=Msa0471690-mRNA-1
chr3_3 CDS 74071710 74072810 74071710 ID=Msa0471690-mRNA-1:cds;Parent=Msa0471690-mRNA-1
chr3_3 CDS 74072907 74072997 74072907 ID=Msa0471690-mRNA-1:cds;Parent=Msa0471690-mRNA-1
chr3_3 CDS 74073112 74073269 74073112 ID=Msa0471690-mRNA-1:cds;Parent=Msa0471690-mRNA-1
chr3_3 CDS 74073360 74073411 74073360 ID=Msa0471690-mRNA-1:cds;Parent=Msa0471690-mRNA-1
chr3_3 CDS 74073708 74073787 74073708 ID=Msa0471690-mRNA-1:cds;Parent=Msa0471690-mRNA-1
chr3_3 CDS 74073886 74073979 74073886 ID=Msa0471690-mRNA-1:cds;Parent=Msa0471690-mRNA-1
chr3_3 CDS 74074121 74074662 74074121 ID=Msa0471690-mRNA-1:cds;Parent=Msa0471690-mRNA-1
chr3_3 three_prime_UTR 74074663 74075823 74074663 ID=Msa0471690-mRNA-1:three_prime_utr;Parent=Msa0471690-mRNA-1
Gene Sequence

>Msa0471690

ATGGGTAGTTTCAGTGGAGAAGAAGATTGTCGGTTTTTTGATGCTGAAGAGGATGTTGTGTCTATTAGGGATGTAAATTCCGATGATGATGATGATGATGATAAAGGGGTGTCTGTGTCTGTTGATTTTGATTATGAAGTGTGGATTCGGAGTCCAAAGAGTGTGAGAGAGCGTAGGGGGAGGTTTATGAAGAGCATGGGAATGAGTGTAGATGAAATTGTAGTTGAAAATTCATTGTATTTTGAGAAGGAAAAGATTATGGAAAGAAGAAGAGATAGTAGTGGTTCTGAAGAGGAATTTAGTTCATGTCGGCTGTCAATGTCTTGTTGCTCTAGTGTGAGTTCTTCGGAGGAATTTGGTTTAGTGGATATTAATAACTTGCCATCTCAAGATGGAAATTTGGAGAAAAGAATGAGGGATAATGAGAAGATGAGTGATTGTTCAAATCAGTTGGTAGTTGCTAAGGAATCTGAGGATTGTGTAAATGTCTCTGGGGTGTCTCATTGTCAAGGATTGATAGATAGAGAGTTTGAGGATGCAGATGGTGATGTGGTTACTAGAACGGTAAATAGGGCGAGAAGGGGTTGGTTGAGAAGATTGAGATCGATGACGTGCGTGGTTGATAATGATAGAGAAGAAGGGAGCTATGCAGTCTCAGGGTGTAGGCTTCAGAAAGTAAAGGTCCGTCAATGTAGGAAGAAAATGAAGGAACTTTCATCGCTTTACTTGAGGCAAGATATCCAAGCGCATGAAGGTGCAATTTTGACCATGAAATTTAGTCCTGATGGGCAGTATCTGGCTACAGGTGGTGAAGATGGGGTTGTTCGGGTGTGGCAAGTGGTTGAGGAGGATAGATGTAATGAAATTCACATTCCTGAAATTGACCCCTCAAGCATTTACTTTACAGTGAATAATCTCTCTCAATTGACACCATTGTTTATGGATAAGGAAAAACTTGGTCAACCGAAGAGCATGAGAAAGACCGCAGATTCAGCTTGTGTTGTTTTCCCGCCTAAGATCTTCCGGTTGTTGGAAAAACCATTGCATGAGTTCCGTGGGCATAGAAGTGAAGTTTTGGATCTCTCTTGGTCAAAGAAGAATTATCTTCTTTCATCATCAGCTGACAAAACTGTCCGACTATGGCAAGTGAATCGTGACCATTGCTTGGAAGTGTTTTCACACAGTAATTATGTGACATGCATACAATTCAATCCTGTTGATGAAGATTATTTCATTAGTGGATCCATAGACGGAAAGGTGCGCATCTGGACGATACCCGATTCTCAGGTTGTTGATTGGACTGATGTCAGAGACATAGTGACTGCAGTATGTTATCGACCGGATGGGCAGGGAGGGATTGTTGGATCTTTAGAAGGAAATTGTTGGTTTTATAAAATATCAGATAATCACTTGCAGCTGGATTCCCAACTATGCTTAATTGGTAAAAAGAAACTTCCTGGCAGAGGGATAACTGGCTTTCAGTTTCTTCCTCAAGATTCCAAGAAAGTTATGGTTACATGTGCTGATTCACAAGTCAGAATCCTTGATGGGCTTAATGTGATTTGTAAATACAAAAGCCTTAACACAGGCAGTCCAATGTGTGCATCATTTACCTCAGACGGGAAACATATTTTATCAGCATGCGAGGACTCTAATGTATATCTATGGAACGTTAATCAGGAAGAGTCTAATAACCCCATGAAATCTAAGAAAGTTAGGTCTTGTGAGCGGTTTTCCTCAAACGCATCAGTTGCGGTACCTTGGCACGGTTTGAAACCTCCAATCTCCGAAAATGAACAATTGAATGTCTTGAATAAAAAGTCACCACAAGTTGTTATGCAATTACACCCCAACCCACCTGCTTCTTTCTCTCTGAACCAAGATTTTTTCTTGGAGTCTTTTCCAAAGGGATCTGCAACCTGGCCCGAGGAGAAGCTTCCTGTTTCGGGCTCCAAGACCAAAAAAACATCATTGCTGCGAAAGTCGGAATACAAATTCTTGAAATCTTCATGTAAGAGTACCAACAATGCTCATGCGTGGGGTATGGTCATTGTGACTGCAGGCTGGGACGGGAAGATAAAAACATTCCAAAATTACGGGCTACCTGTACCCGTTTGA
Protein sequence

>Msa0471690

MGSFSGEEDCRFFDAEEDVVSIRDVNSDDDDDDDKGVSVSVDFDYEVWIRSPKSVRERRGRFMKSMGMSVDEIVVENSLYFEKEKIMERRRDSSGSEEEFSSCRLSMSCCSSVSSSEEFGLVDINNLPSQDGNLEKRMRDNEKMSDCSNQLVVAKESEDCVNVSGVSHCQGLIDREFEDADGDVVTRTVNRARRGWLRRLRSMTCVVDNDREEGSYAVSGCRLQKVKVRQCRKKMKELSSLYLRQDIQAHEGAILTMKFSPDGQYLATGGEDGVVRVWQVVEEDRCNEIHIPEIDPSSIYFTVNNLSQLTPLFMDKEKLGQPKSMRKTADSACVVFPPKIFRLLEKPLHEFRGHRSEVLDLSWSKKNYLLSSSADKTVRLWQVNRDHCLEVFSHSNYVTCIQFNPVDEDYFISGSIDGKVRIWTIPDSQVVDWTDVRDIVTAVCYRPDGQGGIVGSLEGNCWFYKISDNHLQLDSQLCLIGKKKLPGRGITGFQFLPQDSKKVMVTCADSQVRILDGLNVICKYKSLNTGSPMCASFTSDGKHILSACEDSNVYLWNVNQEESNNPMKSKKVRSCERFSSNASVAVPWHGLKPPISENEQLNVLNKKSPQVVMQLHPNPPASFSLNQDFFLESFPKGSATWPEEKLPVSGSKTKKTSLLRKSEYKFLKSSCKSTNNAHAWGMVIVTAGWDGKIKTFQNYGLPVPV*