AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0885820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0885820 MtrunA17_Chr6g0466611 88.534 689 24 4 1 639 33 716 0.0 1138
Msa0885820 MtrunA17_Chr2g0330401 31.367 373 232 7 113 472 94 455 4.49e-50 181
Msa0885820 MtrunA17_Chr6g0483491 32.181 376 229 9 115 478 10 371 1.64e-48 176
Msa0885820 MtrunA17_Chr7g0236841 30.090 442 277 12 115 540 10 435 2.36e-48 175
Msa0885820 MtrunA17_Chr3g0107851 31.061 396 237 9 113 485 115 497 8.27e-48 176
Msa0885820 MtrunA17_Chr3g0121351 29.820 389 244 8 113 478 143 525 3.19e-46 173
Msa0885820 MtrunA17_Chr6g0449911 31.649 376 226 9 113 472 163 523 9.06e-45 170
Msa0885820 MtrunA17_Chr3g0098121 31.283 374 227 9 115 472 152 511 2.75e-43 166
Msa0885820 MtrunA17_Chr3g0145781 29.952 414 233 13 115 485 132 531 3.58e-43 163
Msa0885820 MtrunA17_Chr1g0176041 29.703 404 252 11 113 491 152 548 1.62e-42 162
Msa0885820 MtrunA17_Chr4g0040761 28.404 426 278 11 116 526 20 433 9.74e-42 162
Msa0885820 MtrunA17_Chr0c09g0493491 35.496 262 133 7 62 302 44 290 3.43e-41 151
Msa0885820 MtrunA17_Chr2g0293631 31.016 374 221 11 115 469 496 851 1.44e-40 159
Msa0885820 MtrunA17_Chr7g0270131 29.600 375 237 8 113 472 230 592 5.69e-40 156
Msa0885820 MtrunA17_Chr6g0465771 35.115 262 134 7 62 302 44 290 9.77e-40 149
Msa0885820 MtrunA17_Chr7g0247181 29.211 380 225 9 116 476 141 495 1.71e-38 149
Msa0885820 MtrunA17_Chr7g0247221 29.211 380 225 9 116 476 144 498 2.08e-38 149
Msa0885820 MtrunA17_Chr5g0409981 30.670 388 231 10 113 478 102 473 2.77e-38 149
Msa0885820 MtrunA17_Chr2g0300291 29.867 375 232 10 115 472 141 501 2.82e-38 151
Msa0885820 MtrunA17_Chr7g0247191 29.650 371 235 7 116 476 151 505 1.24e-37 147
Msa0885820 MtrunA17_Chr2g0297261 27.078 373 246 9 113 474 32 389 4.21e-35 137
Msa0885820 MtrunA17_Chr2g0310581 30.649 385 240 11 114 485 52 422 5.53e-35 139
Msa0885820 MtrunA17_Chr1g0200181 26.963 382 225 9 113 463 143 501 1.15e-34 139
Msa0885820 MtrunA17_Chr4g0062301 30.986 355 207 12 128 461 110 447 2.30e-34 138
Msa0885820 MtrunA17_Chr2g0277821 28.021 389 246 10 113 482 502 875 4.88e-34 139
Msa0885820 MtrunA17_Chr4g0076491 26.790 433 268 9 121 526 293 703 6.08e-34 137
Msa0885820 MtrunA17_Chr7g0271121 29.526 359 222 8 121 462 112 456 7.16e-34 137
Msa0885820 MtrunA17_Chr1g0157691 26.440 382 227 9 113 463 145 503 1.28e-33 136
Msa0885820 MtrunA17_Chr6g0449741 26.897 435 267 10 121 528 255 665 1.70e-33 136
Msa0885820 MtrunA17_Chr3g0095031 30.214 374 220 10 102 455 79 431 2.10e-33 135
Msa0885820 MtrunA17_Chr5g0443991 29.330 358 218 10 138 475 99 441 4.02e-33 135
Msa0885820 MtrunA17_Chr1g0193491 27.212 452 268 13 119 547 118 531 1.51e-32 133
Msa0885820 MtrunA17_Chr4g0070981 28.191 376 240 9 112 474 38 396 1.70e-32 130
Msa0885820 MtrunA17_Chr2g0307471 29.268 369 220 13 115 461 91 440 2.05e-32 132
Msa0885820 MtrunA17_Chr5g0442191 29.121 364 228 9 119 467 85 433 2.73e-32 132
Msa0885820 MtrunA17_Chr4g0063551 28.177 362 227 8 137 472 162 516 3.72e-32 132
Msa0885820 MtrunA17_Chr4g0034411 29.805 359 210 12 138 473 99 438 6.89e-32 132
Msa0885820 MtrunA17_Chr2g0299681 27.660 376 242 9 112 474 38 396 9.92e-32 127
Msa0885820 MtrunA17_Chr4g0058591 27.812 320 208 5 115 422 202 510 2.10e-31 128
Msa0885820 MtrunA17_Chr6g0475251 29.178 377 232 8 129 484 117 479 6.29e-31 128
Msa0885820 MtrunA17_Chr6g0461751 26.076 395 260 10 113 490 138 517 2.62e-30 125
Msa0885820 MtrunA17_Chr2g0309551 26.540 422 247 9 115 477 109 526 4.25e-30 125
Msa0885820 MtrunA17_Chr8g0347151 28.831 385 226 15 126 478 212 580 5.99e-30 125
Msa0885820 MtrunA17_Chr2g0329931 27.632 380 231 12 115 474 41 396 1.93e-29 121
Msa0885820 MtrunA17_Chr8g0342861 27.632 380 237 11 112 474 38 396 6.03e-29 119
Msa0885820 MtrunA17_Chr2g0301281 25.708 424 226 14 115 456 41 457 6.93e-29 122
Msa0885820 MtrunA17_Chr1g0204391 29.129 333 209 8 173 492 135 453 6.78e-28 118
Msa0885820 MtrunA17_Chr7g0236831 26.573 429 233 12 115 467 163 585 9.34e-28 119
Msa0885820 MtrunA17_Chr4g0003441 25.907 386 242 12 95 462 95 454 2.14e-27 116
Msa0885820 MtrunA17_Chr8g0347161 27.778 432 256 16 86 478 67 481 4.36e-27 116
Msa0885820 MtrunA17_Chr1g0192021 25.768 423 247 10 115 481 26 437 6.93e-27 115
Msa0885820 MtrunA17_Chr8g0347171 28.424 387 225 16 126 478 171 539 3.72e-26 113
Msa0885820 MtrunA17_Chr8g0386451 26.648 364 228 12 138 474 311 662 1.95e-25 111
Msa0885820 MtrunA17_Chr1g0149251 26.910 301 190 10 173 462 29 310 8.11e-24 103
Msa0885820 MtrunA17_Chr3g0114081 26.562 384 230 14 121 467 22 390 3.36e-23 104
Msa0885820 MtrunA17_Chr7g0263771 24.571 350 242 9 125 465 143 479 4.10e-23 103
Msa0885820 MtrunA17_Chr4g0074521 26.776 366 216 14 123 450 90 441 1.74e-22 101
Msa0885820 MtrunA17_Chr4g0029191 29.954 217 126 6 115 305 44 260 5.82e-21 97.4
Msa0885820 MtrunA17_Chr8g0364251 39.167 120 69 2 357 475 436 552 6.60e-17 84.3
Msa0885820 MtrunA17_Chr8g0364251 25.888 197 105 6 115 279 91 278 4.84e-13 72.0
Msa0885820 MtrunA17_Chr4g0062321 28.750 240 146 8 194 424 7 230 1.45e-16 79.7
Msa0885820 MtrunA17_Chr5g0429221 25.278 360 228 12 115 453 3 342 2.28e-14 75.5
Msa0885820 MtrunA17_Chr6g0466571 36.207 116 57 3 62 171 44 148 3.15e-14 70.9
Msa0885820 MtrunA17_Chr8g0349951 32.117 137 85 2 113 241 8 144 7.68e-14 69.7
Msa0885820 MtrunA17_Chr4g0039471 29.557 203 125 3 115 307 223 417 9.41e-14 73.9
Msa0885820 MtrunA17_Chr6g0466581 39.785 93 50 2 162 254 37 123 1.09e-12 65.5
Msa0885820 MtrunA17_Chr0c30g0494091 25.703 249 158 8 123 350 90 332 6.26e-12 67.8
Msa0885820 MtrunA17_Chr3g0137901 32.090 134 81 4 332 462 20 146 8.64e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0885820 AT4G09730.1 58.100 642 209 11 10 632 18 618 0.0 667
Msa0885820 AT1G55150.1 30.607 379 239 7 113 478 98 465 1.68e-48 177
Msa0885820 AT3G06980.1 31.605 405 224 16 115 480 375 765 7.85e-48 180
Msa0885820 AT1G55150.2 30.607 379 239 7 113 478 123 490 2.32e-47 175
Msa0885820 AT1G16280.1 32.447 376 231 8 115 478 59 423 5.48e-46 170
Msa0885820 AT3G01540.4 31.383 376 223 10 115 472 159 517 1.65e-45 171
Msa0885820 AT3G01540.2 31.383 376 223 10 115 472 159 517 1.65e-45 171
Msa0885820 AT3G01540.3 31.383 376 223 10 115 472 159 517 1.65e-45 171
Msa0885820 AT3G01540.1 31.383 376 223 10 115 472 159 517 1.66e-45 171
Msa0885820 AT5G63120.2 29.255 376 242 7 116 478 167 531 7.15e-44 166
Msa0885820 AT5G60990.1 30.380 395 237 10 107 478 2 381 5.24e-43 161
Msa0885820 AT3G06480.1 31.903 373 225 10 115 472 436 794 8.00e-43 166
Msa0885820 AT5G14610.2 31.017 403 234 13 115 496 162 541 1.60e-42 163
Msa0885820 AT5G14610.6 31.017 403 234 13 115 496 162 541 1.64e-42 163
Msa0885820 AT5G14610.5 31.017 403 234 13 115 496 170 549 2.58e-42 162
Msa0885820 AT1G77030.1 29.363 361 233 7 116 465 30 379 1.63e-40 159
Msa0885820 AT3G18600.1 31.016 374 222 12 106 456 74 434 1.76e-40 156
Msa0885820 AT2G42520.2 29.455 404 253 10 113 491 158 554 1.41e-39 154
Msa0885820 AT2G42520.1 29.455 404 253 10 113 491 158 554 1.41e-39 154
Msa0885820 AT2G42520.3 29.455 404 253 10 113 491 158 554 1.41e-39 154
Msa0885820 AT2G47330.1 30.159 378 231 10 113 472 227 589 2.67e-39 154
Msa0885820 AT3G58510.1 29.104 402 255 9 113 491 150 544 2.82e-39 153
Msa0885820 AT3G58510.3 29.104 402 255 9 113 491 150 544 2.82e-39 153
Msa0885820 AT3G58510.2 29.104 402 255 9 113 491 150 544 2.82e-39 153
Msa0885820 AT5G65900.1 29.443 377 238 10 115 475 155 519 3.07e-39 153
Msa0885820 AT4G16630.1 28.536 403 257 10 115 502 168 554 3.54e-39 154
Msa0885820 AT1G31970.1 29.691 421 249 13 81 478 91 487 9.62e-39 150
Msa0885820 AT5G14610.7 29.858 422 244 14 104 496 12 410 1.72e-38 149
Msa0885820 AT5G14610.3 29.858 422 244 14 104 496 12 410 1.72e-38 149
Msa0885820 AT5G14610.1 30.591 389 226 13 129 496 244 609 3.56e-38 151
Msa0885820 AT4G00660.1 28.647 377 231 9 116 476 133 487 1.08e-37 147
Msa0885820 AT4G00660.2 28.647 377 231 9 116 476 133 487 1.08e-37 147
Msa0885820 AT3G19760.1 28.460 383 247 10 104 474 24 391 1.59e-37 144
Msa0885820 AT3G58570.1 27.806 392 247 10 113 478 145 526 1.66e-36 145
Msa0885820 AT2G45810.1 30.278 360 225 9 116 465 156 499 2.36e-36 143
Msa0885820 AT3G61240.2 29.589 365 221 9 116 465 126 469 6.88e-36 142
Msa0885820 AT3G61240.1 29.589 365 221 9 116 465 126 469 6.88e-36 142
Msa0885820 AT2G33730.1 27.335 439 270 9 115 526 314 730 1.51e-35 143
Msa0885820 AT1G20920.4 27.559 381 242 10 120 481 535 900 4.79e-34 139
Msa0885820 AT1G20920.6 27.559 381 242 10 120 481 535 900 4.79e-34 139
Msa0885820 AT1G20920.3 27.559 381 242 10 120 481 535 900 4.79e-34 139
Msa0885820 AT1G20920.7 27.559 381 242 10 120 481 535 900 4.79e-34 139
Msa0885820 AT1G20920.5 27.559 381 242 10 120 481 535 900 4.79e-34 139
Msa0885820 AT1G20920.1 27.559 381 242 10 120 481 535 900 4.79e-34 139
Msa0885820 AT5G63630.2 29.829 409 236 16 116 491 250 640 6.97e-34 138
Msa0885820 AT5G62190.1 31.099 373 222 8 133 484 115 473 9.42e-34 137
Msa0885820 AT1G20920.2 27.559 381 242 10 120 481 197 562 1.66e-33 137
Msa0885820 AT5G08610.1 26.961 408 249 14 116 491 384 774 2.84e-33 137
Msa0885820 AT5G63630.1 29.829 409 236 16 116 491 56 446 4.72e-33 134
Msa0885820 AT5G14610.4 29.885 348 203 12 115 441 170 497 6.16e-33 133
Msa0885820 AT3G22330.1 28.982 383 237 12 108 474 101 464 8.12e-33 134
Msa0885820 AT1G51380.1 24.936 389 271 7 94 473 1 377 1.09e-32 130
Msa0885820 AT5G51280.1 26.862 376 233 8 113 463 145 503 1.50e-32 133
Msa0885820 AT3G22310.2 29.111 371 233 10 119 474 121 476 2.89e-32 132
Msa0885820 AT3G22310.1 29.111 371 233 10 119 474 121 476 3.21e-32 132
Msa0885820 AT1G12770.2 26.415 424 242 11 115 476 111 526 3.51e-32 131
Msa0885820 AT1G12770.1 26.415 424 242 11 115 476 111 526 3.51e-32 131
Msa0885820 AT5G26742.1 33.333 282 172 6 176 455 181 448 4.44e-32 132
Msa0885820 AT5G26742.2 33.333 282 172 6 176 455 181 448 4.45e-32 132
Msa0885820 AT5G26742.3 33.333 282 172 6 176 455 88 355 4.50e-32 132
Msa0885820 AT5G63120.1 28.213 319 206 6 116 422 167 474 1.22e-31 129
Msa0885820 AT5G63120.3 28.213 319 206 6 116 422 167 474 1.80e-31 128
Msa0885820 AT5G63120.4 28.213 319 206 6 116 422 167 474 1.80e-31 128
Msa0885820 AT5G63120.5 28.213 319 206 6 116 422 167 474 1.80e-31 128
Msa0885820 AT5G54910.1 27.340 406 250 12 98 475 48 436 2.11e-31 130
Msa0885820 AT3G09620.1 27.487 382 212 12 120 481 402 738 3.60e-31 130
Msa0885820 AT3G09620.2 27.487 382 212 12 120 481 403 739 3.94e-31 130
Msa0885820 AT3G13920.1 27.536 414 266 12 76 474 1 395 4.18e-31 126
Msa0885820 AT3G02065.3 27.778 432 266 12 99 504 91 502 4.32e-31 127
Msa0885820 AT3G02065.2 27.778 432 266 12 99 504 91 502 4.32e-31 127
Msa0885820 AT3G13920.2 27.407 405 260 11 76 465 1 386 5.76e-31 126
Msa0885820 AT3G13920.5 27.407 405 260 11 76 465 5 390 7.90e-31 125
Msa0885820 AT4G33370.1 27.415 383 222 10 113 463 96 454 9.39e-31 127
Msa0885820 AT3G06480.2 30.330 333 203 10 115 432 436 754 9.43e-31 129
Msa0885820 AT3G13920.3 28.075 374 237 10 115 474 30 385 1.28e-30 124
Msa0885820 AT1G72730.1 27.346 373 245 9 112 473 39 396 1.58e-29 122
Msa0885820 AT3G13920.4 27.536 414 261 13 76 474 1 390 3.70e-29 120
Msa0885820 AT1G54270.1 27.851 377 234 11 115 474 40 395 4.94e-29 120
Msa0885820 AT5G08620.1 26.961 408 249 16 116 491 82 472 8.47e-29 121
Msa0885820 AT2G40700.1 25.740 439 235 15 99 456 21 449 1.64e-28 121
Msa0885820 AT5G11170.1 25.564 399 252 13 95 474 34 406 2.41e-28 118
Msa0885820 AT5G11200.1 25.564 399 252 13 95 474 34 406 2.41e-28 118
Msa0885820 AT3G02065.1 26.975 367 235 8 144 492 3 354 8.58e-28 115
Msa0885820 AT1G28180.1 30.293 307 191 9 176 475 50 340 1.01e-27 115
Msa0885820 AT1G54270.2 27.851 377 229 12 115 474 40 390 4.11e-27 114
Msa0885820 AT3G09720.2 24.586 362 251 9 120 472 147 495 4.08e-25 110
Msa0885820 AT3G09720.1 24.586 362 251 9 120 472 147 495 4.08e-25 110
Msa0885820 AT1G71370.1 26.882 372 228 14 121 465 23 377 5.63e-25 110
Msa0885820 AT2G07750.1 26.975 367 224 12 126 462 387 739 3.21e-24 108
Msa0885820 AT1G63250.1 27.248 367 223 13 126 462 340 692 4.52e-24 108
Msa0885820 AT5G11170.2 26.115 314 201 11 173 474 29 323 3.13e-23 102
Msa0885820 AT5G05450.1 25.600 375 238 12 121 465 23 386 7.21e-23 103
Msa0885820 AT1G59990.2 31.500 200 127 5 290 483 354 549 7.42e-23 103
Msa0885820 AT1G59990.1 31.500 200 127 5 290 483 354 549 8.45e-23 103
Msa0885820 AT3G53110.1 25.385 390 254 16 116 479 93 471 3.40e-21 97.8
Msa0885820 AT5G19210.2 25.833 360 225 15 123 450 85 434 6.38e-21 96.7
Msa0885820 AT4G34910.1 25.570 395 223 10 115 450 47 429 1.24e-20 96.7
Msa0885820 AT1G51380.2 23.571 280 196 5 94 365 1 270 8.40e-19 87.4
Msa0885820 AT3G16840.1 25.470 479 255 21 115 505 191 655 1.02e-18 91.3
Msa0885820 AT3G16840.2 25.470 479 255 21 115 505 192 656 1.07e-18 91.3
Msa0885820 AT1G51380.4 25.112 223 151 4 94 308 1 215 7.88e-16 79.0
Msa0885820 AT1G51380.3 25.112 223 151 4 94 308 1 215 1.33e-15 78.6

Find 177 sgRNAs with CRISPR-Local

Find 550 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTCAGTGATTTGGTTCC+TGG 0.203101 6_1:-42987348 None:intergenic
GGGATTAGGGGATGAGGTTA+TGG 0.203947 6_1:+42980680 Msa0885820:CDS
AACTTAGTGTTGTCGGATTT+AGG 0.207786 6_1:+42987720 Msa0885820:CDS
AACAAGTTTGGTTACTAAAA+AGG 0.214684 6_1:+42987235 Msa0885820:CDS
CACATTGGTTTGCACAGATT+TGG 0.254354 6_1:+42986661 Msa0885820:CDS
TTCTTCTCTGCTCAGTGATT+TGG 0.260232 6_1:-42987355 None:intergenic
GAGAATGGTGTGAAGCGTTT+TGG 0.271954 6_1:-42980429 None:intergenic
GGAAGAGGGATGATGAGTTT+TGG 0.279464 6_1:-42980407 None:intergenic
CCTTTCTTCGTAAACTTTGA+TGG 0.281533 6_1:-42987584 None:intergenic
ACTTAGTGTTGTCGGATTTA+GGG 0.284382 6_1:+42987721 Msa0885820:CDS
TGGTTAAACCTTCAAAAGTT+AGG 0.287584 6_1:+42987390 Msa0885820:CDS
CAAGTCTTGCAAAGGGTAAC+AGG 0.293605 6_1:+42985189 Msa0885820:CDS
GGATTAGGGGATGAGGTTAT+GGG 0.308672 6_1:+42980681 Msa0885820:CDS
GTTGTGTTAGGGTCTCATAC+TGG 0.314792 6_1:+42980783 Msa0885820:CDS
GGCTGCTAGGGGTCTGGACT+TGG 0.319101 6_1:+42986682 Msa0885820:CDS
TTGAAAGGTGGAAGTGGAAG+TGG 0.320529 6_1:+42980549 Msa0885820:CDS
TAAGTCATCATGCACGATTC+AGG 0.322062 6_1:+42982983 Msa0885820:CDS
TATTGGTGTTCCGGCTGTTT+TGG 0.327173 6_1:+42980749 Msa0885820:CDS
CCTAGGTTTCCAGACTGTTT+TGG 0.332417 6_1:+42983329 Msa0885820:CDS
TGCAGGGAAAATAACAAGTT+TGG 0.346745 6_1:+42987223 Msa0885820:intron
AAGTTTAGAACGTGTAGATT+TGG 0.351497 6_1:-42987702 None:intergenic
TAAGTGGTGGTGGCCGTCTA+AGG 0.354245 6_1:+42983016 Msa0885820:CDS
ACATATCGAGGAAGGAAATA+TGG 0.357472 6_1:+42983104 Msa0885820:CDS
GATGGGAAGAGTGTTGTGTT+AGG 0.371156 6_1:+42980771 Msa0885820:CDS
GAAGGACACTTACCACATAT+TGG 0.371190 6_1:-42983140 None:intergenic
CAAACTGGATTCATTACTTC+AGG 0.375439 6_1:+42984063 Msa0885820:CDS
ACAATGTTTGATCGGGGCTT+TGG 0.376865 6_1:+42983249 Msa0885820:CDS
ACTTAGTAACCCCATTGATA+TGG 0.386087 6_1:+42983053 Msa0885820:CDS
TGAATACCAGGTCAGGTACT+AGG 0.391054 6_1:+42987441 Msa0885820:CDS
CGTTCTAAACTTAGTGTTGT+CGG 0.395382 6_1:+42987713 Msa0885820:CDS
AGATTTGGCTGCTAGGGGTC+TGG 0.397261 6_1:+42986676 Msa0885820:CDS
AGAATACCAGGTCAGGTACT+AGG 0.403593 6_1:+42987492 Msa0885820:CDS
TGCCAGGTCAGGTACAAAAT+CGG 0.404709 6_1:+42987547 Msa0885820:CDS
CCATCAAAGTTTACGAAGAA+AGG 0.407044 6_1:+42987584 Msa0885820:CDS
CTGTTACCCTTTGCAAGACT+TGG 0.413118 6_1:-42985188 None:intergenic
TTGCACAGATTTGGCTGCTA+GGG 0.414314 6_1:+42986670 Msa0885820:CDS
AAGGGTGGTGAGGAAGGTTG+AGG 0.415334 6_1:+42980587 Msa0885820:CDS
TAATGAATCCAGTTTGTTCT+CGG 0.417733 6_1:-42984056 None:intergenic
TAGTTTGAAGAGAGAGAAAC+GGG 0.418982 6_1:-42980382 None:intergenic
TTTCTTGAAGCTACTTGTAC+TGG 0.426064 6_1:-42987636 None:intergenic
CTCAGATCTCCTGCGAGAAT+CGG 0.426827 6_1:-42987471 None:intergenic
TGCTGGTACCGAGAACAAAC+TGG 0.432899 6_1:+42984048 Msa0885820:CDS
GATTAGGGGATGAGGTTATG+GGG 0.434063 6_1:+42980682 Msa0885820:CDS
GAGGAAGGAAATATGGTATA+CGG 0.442197 6_1:+42983111 Msa0885820:CDS
AAATATTACCTTTGTGCTGC+CGG 0.444820 6_1:-42985308 None:intergenic
CTTGCAGGCTGTGCAAAATC+TGG 0.446135 6_1:+42983937 Msa0885820:intron
GATTCAGTGTATTGGTGTTC+CGG 0.446539 6_1:+42980740 Msa0885820:CDS
GGGGTGAAGAAGAAGAAAGA+GGG 0.446901 6_1:+42980609 Msa0885820:CDS
GGCAGACACAATGTTTGATC+GGG 0.451258 6_1:+42983242 Msa0885820:CDS
CACAGGTAGAACTGCCCGTA+TGG 0.451792 6_1:+42986843 Msa0885820:CDS
TACGAGGGAGTTGTCTGAAC+AGG 0.453116 6_1:+42982863 Msa0885820:CDS
ATTAGGGGATGAGGTTATGG+GGG 0.453447 6_1:+42980683 Msa0885820:CDS
CCTACTGAGATTCAGTGTAT+TGG 0.453781 6_1:+42980732 Msa0885820:CDS
TGATGAAAGGGTGGTGAGGA+AGG 0.464301 6_1:+42980581 Msa0885820:CDS
GTACCAACTACCATATCAAT+GGG 0.465074 6_1:-42983063 None:intergenic
GGTTAAACCTTCAAAAGTTA+GGG 0.467637 6_1:+42987391 Msa0885820:CDS
TGAAGAGAGAGAAACGGGAT+GGG 0.469235 6_1:-42980377 None:intergenic
GCCAGGTCAGGTACAAAATC+GGG 0.469241 6_1:+42987548 Msa0885820:CDS
ATGGGAAGAGTGTTGTGTTA+GGG 0.471832 6_1:+42980772 Msa0885820:CDS
GGTTCCTGGTTACATCCATT+CGG 0.472127 6_1:-42987334 None:intergenic
CGGTTCTCCTTGAGAGGTTG+AGG 0.473324 6_1:+42980517 Msa0885820:CDS
GGTGGTGAGGAAGGTTGAGG+GGG 0.476225 6_1:+42980590 Msa0885820:CDS
TTTGCACAGATTTGGCTGCT+AGG 0.477569 6_1:+42986669 Msa0885820:CDS
CTGGTTGATGAGGAGTTTCA+AGG 0.479383 6_1:+42983956 Msa0885820:CDS
TTGTGTTAGGGTCTCATACT+GGG 0.486641 6_1:+42980784 Msa0885820:CDS
ATAGTTTGAAGAGAGAGAAA+CGG 0.486670 6_1:-42980383 None:intergenic
GAGAGAGAAACGGGATGGGA+AGG 0.488249 6_1:-42980373 None:intergenic
AGAAATCTTCTTATGTAATG+AGG 0.488480 6_1:-42983999 None:intergenic
TCTTCAGATAATAAGCGAAC+GGG 0.490182 6_1:+42987662 Msa0885820:CDS
AGGGCATAACACAACAGCTC+GGG 0.490623 6_1:-42982841 None:intergenic
GAAACGGGATGGGAAGGTGA+TGG 0.491250 6_1:-42980367 None:intergenic
TGCAAAGGGTAACAGGGTAA+TGG 0.493141 6_1:+42985196 Msa0885820:CDS
ACGTGTAGATTTGGAGGCAG+TGG 0.496287 6_1:-42987693 None:intergenic
AGGGTGGTGAGGAAGGTTGA+GGG 0.498396 6_1:+42980588 Msa0885820:CDS
GGTACCAACTACCATATCAA+TGG 0.509606 6_1:-42983064 None:intergenic
ACGGGATGGGAAGGTGATGG+AGG 0.510696 6_1:-42980364 None:intergenic
ACAACAGCTCGGGGACGCTT+CGG 0.511340 6_1:-42982831 None:intergenic
GGGTGGTGAGGAAGGTTGAG+GGG 0.513086 6_1:+42980589 Msa0885820:CDS
AGATCTGAGAATACCAGGTC+AGG 0.514030 6_1:+42987485 Msa0885820:CDS
AGATCTGAGAATGCCAGGTC+AGG 0.514072 6_1:+42987536 Msa0885820:CDS
TGGTAGTTGGTACCCCTGGC+AGG 0.515430 6_1:+42983073 Msa0885820:CDS
ACTGCCCGTATGGGTGCAAA+AGG 0.516955 6_1:+42986853 Msa0885820:CDS
GAATTACCATGGGGAGGTAC+CGG 0.517454 6_1:+42985289 Msa0885820:CDS
AACCCCATTGATATGGTAGT+TGG 0.519954 6_1:+42983060 Msa0885820:CDS
TTGAAGAGAGAGAAACGGGA+TGG 0.520544 6_1:-42980378 None:intergenic
TTTAGAACGTGTAGATTTGG+AGG 0.520621 6_1:-42987699 None:intergenic
TGTTACTCTTGAACTTGTTG+AGG 0.521378 6_1:-42986625 None:intergenic
TAGCTTGGCAACCAAGATAG+AGG 0.527158 6_1:+42987262 Msa0885820:CDS
AGACATTTGAAAGGTGGAAG+TGG 0.527304 6_1:+42980543 Msa0885820:CDS
AAATCTGTGCAAACCAATGT+GGG 0.527355 6_1:-42986659 None:intergenic
TGACCTGGTATTCACAGAAT+CGG 0.530166 6_1:-42987432 None:intergenic
AGGATAAGACATTTGAAAGG+TGG 0.532185 6_1:+42980537 Msa0885820:CDS
GTGGAAGTGGAAGTGGGAGT+AGG 0.533457 6_1:+42980556 Msa0885820:CDS
TTGCAGTTACCAAAACAGTC+TGG 0.534069 6_1:-42983338 None:intergenic
GGGTGAAGAAGAAGAAAGAG+GGG 0.535186 6_1:+42980610 Msa0885820:CDS
CTCTTCCCATCCAAAACAGC+CGG 0.535606 6_1:-42980759 None:intergenic
ATATGTTGAAGAATCCTGCC+AGG 0.536167 6_1:-42983087 None:intergenic
AGGCAGACACAATGTTTGAT+CGG 0.536521 6_1:+42983241 Msa0885820:CDS
TGCACAGATTTGGCTGCTAG+GGG 0.536732 6_1:+42986671 Msa0885820:CDS
AGGGTTGGGATTAGGGGATG+AGG 0.537818 6_1:+42980674 Msa0885820:CDS
CTTAGTGTTGTCGGATTTAG+GGG 0.541491 6_1:+42987722 Msa0885820:CDS
GCAACAGATCTGAGAATGCC+AGG 0.542988 6_1:+42987531 Msa0885820:CDS
AGACGGGATGAGCAATTGAA+TGG 0.544846 6_1:+42982795 Msa0885820:intron
TGGGAGTAGGAATGATGAAA+GGG 0.544886 6_1:+42980569 Msa0885820:CDS
GTGGGAGTAGGAATGATGAA+AGG 0.545250 6_1:+42980568 Msa0885820:CDS
CACAAAAGAAAGTGTCCGAA+TGG 0.550777 6_1:+42987319 Msa0885820:CDS
TGAAAGGTGGAAGTGGAAGT+GGG 0.551541 6_1:+42980550 Msa0885820:CDS
CAACGATGATTGCCCCACAT+TGG 0.553030 6_1:+42986646 Msa0885820:CDS
CAGTTCTACCTGTGCGATGG+AGG 0.555569 6_1:-42986834 None:intergenic
GGGGAGCTCACTGAATTCAA+AGG 0.557896 6_1:-42986734 None:intergenic
GTCTTATCCTCAACCTCTCA+AGG 0.562134 6_1:-42980524 None:intergenic
CAAATCTGTGCAAACCAATG+TGG 0.562203 6_1:-42986660 None:intergenic
TCAGGGTCAGATAGCAATGA+TGG 0.564479 6_1:-42980480 None:intergenic
CCAATACACTGAATCTCAGT+AGG 0.564890 6_1:-42980732 None:intergenic
GAATACCAGGTCAGGTACTA+GGG 0.565786 6_1:+42987442 Msa0885820:CDS
GAATACCAGGTCAGGTACTA+GGG 0.565786 6_1:+42987493 Msa0885820:CDS
TTACTAAGTGACTCCTCTTG+AGG 0.565857 6_1:-42983039 None:intergenic
TTCTTCAGATAATAAGCGAA+CGG 0.568207 6_1:+42987661 Msa0885820:CDS
GCTTCAAAACCTGACAGCCT+AGG 0.570391 6_1:+42983312 Msa0885820:CDS
GGGAGCTCACTGAATTCAAA+GGG 0.570482 6_1:-42986733 None:intergenic
AACACTCGGTTCTCCTTGAG+AGG 0.570782 6_1:+42980511 Msa0885820:CDS
CCAAAACAGTCTGGAAACCT+AGG 0.570865 6_1:-42983329 None:intergenic
TGTACCATGGTAAGTGGTGG+TGG 0.571620 6_1:+42983006 Msa0885820:CDS
TTGAGGATAAGACATTTGAA+AGG 0.572008 6_1:+42980534 Msa0885820:CDS
GGGACAAATCCGATTCTCGC+AGG 0.574967 6_1:+42987462 Msa0885820:CDS
GATTCTGTGAATACCAGGTC+AGG 0.575248 6_1:+42987434 Msa0885820:CDS
AAATGTTTGTCTCTTATCTG+AGG 0.575971 6_1:-42987759 None:intergenic
TGGTGAGGATTGTGCTGTGG+TGG 0.578649 6_1:-42980460 None:intergenic
TTCAGGTGTACCATGGTAAG+TGG 0.579508 6_1:+42983000 Msa0885820:CDS
ACAGGTAGAACTGCCCGTAT+GGG 0.581052 6_1:+42986844 Msa0885820:CDS
TATCTACTGTGAATTACCAT+GGG 0.581073 6_1:+42985279 Msa0885820:CDS
AAATCAGCATACCTTTGTCA+TGG 0.581708 6_1:-42983361 None:intergenic
GATATGGTAGTTGGTACCCC+TGG 0.581861 6_1:+42983069 Msa0885820:CDS
TTCTTCAAGAAAGTGATCCA+CGG 0.582405 6_1:-42985249 None:intergenic
ATATCTACTGTGAATTACCA+TGG 0.584265 6_1:+42985278 Msa0885820:CDS
GCACCGATTCTGTGAATACC+AGG 0.588254 6_1:+42987429 Msa0885820:CDS
TGTTCAGACAACTCCCTCGT+AGG 0.588766 6_1:-42982861 None:intergenic
ATTCTTCAACATATCGAGGA+AGG 0.588977 6_1:+42983096 Msa0885820:CDS
GTTAGAGCCAAGTCTTGCAA+AGG 0.589506 6_1:+42985181 Msa0885820:CDS
GCAGGAGATCTGAGAATACC+AGG 0.594522 6_1:+42987480 Msa0885820:CDS
GTTCAGACAACTCCCTCGTA+GGG 0.595564 6_1:-42982860 None:intergenic
TTTGTCCCTAGTACCTGACC+TGG 0.605606 6_1:-42987498 None:intergenic
ATTGACTACCTCCATCGCAC+AGG 0.606888 6_1:+42986826 Msa0885820:CDS
GGTAACTGCAACCATGACAA+AGG 0.608079 6_1:+42983350 Msa0885820:CDS
GGAATGATGAAAGGGTGGTG+AGG 0.608407 6_1:+42980577 Msa0885820:CDS
GTCAGATAGCAATGATGGTG+AGG 0.610165 6_1:-42980475 None:intergenic
TTAGAGCCAAGTCTTGCAAA+GGG 0.610580 6_1:+42985182 Msa0885820:CDS
ATACGGTGACATCCAATATG+TGG 0.614837 6_1:+42983128 Msa0885820:CDS
AAGTCTTGCAAAGGGTAACA+GGG 0.620394 6_1:+42985190 Msa0885820:CDS
CTGTTGTGTTATGCCCTACG+AGG 0.625441 6_1:+42982847 Msa0885820:CDS
GGGAGGTACCGGCAGCACAA+AGG 0.625542 6_1:+42985300 Msa0885820:CDS
ATTGAATTCTAGTCGTGCCG+TGG 0.634131 6_1:+42985232 Msa0885820:CDS
TATGTTGAAGAATCCTGCCA+GGG 0.634137 6_1:-42983086 None:intergenic
TACTGTGAATTACCATGGGG+AGG 0.636430 6_1:+42985283 Msa0885820:CDS
TAGGGCATAACACAACAGCT+CGG 0.639481 6_1:-42982842 None:intergenic
GAGTAGGAATGATGAAAGGG+TGG 0.639596 6_1:+42980572 Msa0885820:CDS
TGGCCGTCTAAGGCCTCAAG+AGG 0.639884 6_1:+42983026 Msa0885820:CDS
CAGGATTCTTCAACATATCG+AGG 0.646851 6_1:+42983092 Msa0885820:CDS
TGCACGATTCAGGTGTACCA+TGG 0.647412 6_1:+42982993 Msa0885820:CDS
GGGCATAACACAACAGCTCG+GGG 0.648206 6_1:-42982840 None:intergenic
TGATGGTGAGGATTGTGCTG+TGG 0.649657 6_1:-42980463 None:intergenic
ACTCCTCTTGAGGCCTTAGA+CGG 0.651644 6_1:-42983029 None:intergenic
ACGGCCACCACCACTTACCA+TGG 0.655598 6_1:-42983010 None:intergenic
GTGTCCGAATGGATGTAACC+AGG 0.656362 6_1:+42987330 Msa0885820:CDS
GCAGACACAATGTTTGATCG+GGG 0.661699 6_1:+42983243 Msa0885820:CDS
GGTGAAGAAGAAGAAAGAGG+GGG 0.666453 6_1:+42980611 Msa0885820:CDS
TGTGCAAAATCTGGTTGATG+AGG 0.670380 6_1:+42983946 Msa0885820:CDS
TGTTGTGTTATGCCCTACGA+GGG 0.670632 6_1:+42982848 Msa0885820:CDS
CTTGGCAACCAAGATAGAGG+AGG 0.685753 6_1:+42987265 Msa0885820:CDS
TTTGTCCCTAGTACCTGACC+TGG 0.685973 6_1:-42987447 None:intergenic
TTAGTGTTGTCGGATTTAGG+GGG 0.694525 6_1:+42987723 Msa0885820:CDS
AATCTGTGCAAACCAATGTG+GGG 0.699522 6_1:-42986658 None:intergenic
GTGGTGGTGAGAGAAGAGAA+TGG 0.716026 6_1:-42980444 None:intergenic
AGGTGTACCATGGTAAGTGG+TGG 0.717673 6_1:+42983003 Msa0885820:CDS
ATGTTGAAGAATCCTGCCAG+GGG 0.728432 6_1:-42983085 None:intergenic
ATCTACTGTGAATTACCATG+GGG 0.736665 6_1:+42985280 Msa0885820:CDS
TACCAACTACCATATCAATG+GGG 0.769264 6_1:-42983062 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTTTTATTTTAATTATTAC+TGG + chr6_1:42981753-42981772 Msa0885820:intron 10.0%
!! CTATTAATATTAAAAAAAGA+AGG - chr6_1:42986774-42986793 None:intergenic 10.0%
!!! CTTCTTTTTTTAATATTAAT+AGG + chr6_1:42986772-42986791 Msa0885820:intron 10.0%
!!! TTTAATTTTTACTTTGAATG+TGG + chr6_1:42981853-42981872 Msa0885820:intron 15.0%
!!! TTAATTTTTACTTTGAATGT+GGG + chr6_1:42981854-42981873 Msa0885820:intron 15.0%
!! AATTTATGTACATATTAGAT+TGG + chr6_1:42981981-42982000 Msa0885820:intron 15.0%
!!! GTTTTGTTTAAAAAATTGAT+CGG - chr6_1:42982592-42982611 None:intergenic 15.0%
!!! TATTTTTCTAGTAAATGTAT+AGG + chr6_1:42982725-42982744 Msa0885820:intron 15.0%
!!! GGTATTTTTGATAATATTAT+CGG - chr6_1:42983717-42983736 None:intergenic 15.0%
!! ATATTACATAATATAAACCA+AGG - chr6_1:42985141-42985160 None:intergenic 15.0%
!! TTTAAATGAAAAAGTAATAC+AGG - chr6_1:42986591-42986610 None:intergenic 15.0%
!!! AGAGAAATTTTTTCTATATT+TGG - chr6_1:42986909-42986928 None:intergenic 15.0%
!! CTAATTTAAAAACAAAATTG+TGG - chr6_1:42987036-42987055 None:intergenic 15.0%
!!! TTTAGCTTAAAATTGTATAT+CGG + chr6_1:42987135-42987154 Msa0885820:intron 15.0%
!!! TTTGGTTTTGAAAATCTTTA+GGG + chr6_1:42980997-42981016 Msa0885820:intron 20.0%
!!! TAATCACTTCTATTTTTCAA+TGG + chr6_1:42981109-42981128 Msa0885820:intron 20.0%
!!! TCAAATTTTTACTTTGTATG+TGG + chr6_1:42981179-42981198 Msa0885820:intron 20.0%
!!! CAAATTTTTACTTTGTATGT+GGG + chr6_1:42981180-42981199 Msa0885820:intron 20.0%
!! AAGAAAAAAATGAATCAATC+CGG - chr6_1:42982413-42982432 None:intergenic 20.0%
!!! TTTTTATGTACATGTTTTAG+AGG + chr6_1:42982888-42982907 Msa0885820:intron 20.0%
!!! ATTGCACAAATTGATTTAAA+CGG + chr6_1:42982929-42982948 Msa0885820:intron 20.0%
!! ACATTCAAATTATCAATTGA+AGG - chr6_1:42983161-42983180 None:intergenic 20.0%
!!! GATTTGTTCTAAAATTTTGT+TGG + chr6_1:42983379-42983398 Msa0885820:intron 20.0%
!!! TAGTTTATTTTGATTCGATA+CGG + chr6_1:42983461-42983480 Msa0885820:intron 20.0%
!!! GATTGTTTTATACATAACAA+GGG - chr6_1:42983506-42983525 None:intergenic 20.0%
!!! CTTGTTATGTATAAAACAAT+CGG + chr6_1:42983505-42983524 Msa0885820:intron 20.0%
!! TTGTTATGTATAAAACAATC+GGG + chr6_1:42983506-42983525 Msa0885820:intron 20.0%
!! AAAATAAATAAGCATGTGAA+GGG - chr6_1:42983545-42983564 None:intergenic 20.0%
!! AAGTCTAGTGAAAAATATTT+AGG + chr6_1:42983870-42983889 Msa0885820:intron 20.0%
!!! AATTAAATGTATTTTGGTGA+TGG - chr6_1:42984200-42984219 None:intergenic 20.0%
!!! GTCTACAATTAAATGTATTT+TGG - chr6_1:42984206-42984225 None:intergenic 20.0%
!!! AATAGTTTTTGAATGGTTTT+GGG - chr6_1:42984373-42984392 None:intergenic 20.0%
!!! AAATAGTTTTTGAATGGTTT+TGG - chr6_1:42984374-42984393 None:intergenic 20.0%
!!! AGTATGAAATAGTTTTTGAA+TGG - chr6_1:42984380-42984399 None:intergenic 20.0%
!!! ATTTTGCTTATCAAATAACA+TGG - chr6_1:42984929-42984948 None:intergenic 20.0%
!!! TTAAAAGTGTTGTTAAATAG+AGG + chr6_1:42985872-42985891 Msa0885820:intron 20.0%
!! CAAAAAATAATCTACAATGT+GGG - chr6_1:42985965-42985984 None:intergenic 20.0%
!! TCAAAAAATAATCTACAATG+TGG - chr6_1:42985966-42985985 None:intergenic 20.0%
!! GAATTAATGAACATAGAAAA+TGG + chr6_1:42986246-42986265 Msa0885820:intron 20.0%
!!! TAGTCAATCTAAAATTGAAT+GGG - chr6_1:42986814-42986833 None:intergenic 20.0%
!! AATAAAAAAGAACGAGAATT+TGG + chr6_1:42987289-42987308 Msa0885820:CDS 20.0%
!!! AGATTTTACAGATTTTGAAA+CGG - chr6_1:42987615-42987634 None:intergenic 20.0%
!!! GAATGGTTTTGGAAATTATA+GGG + chr6_1:42980853-42980872 Msa0885820:intron 25.0%
!!! GTTTGGTTTTGAAAATCTTT+AGG + chr6_1:42980996-42981015 Msa0885820:intron 25.0%
! TCGCTATCTAACATTTAAAA+AGG - chr6_1:42981236-42981255 None:intergenic 25.0%
!! TTTTAAATGTTAGATAGCGA+AGG + chr6_1:42981236-42981255 Msa0885820:intron 25.0%
!! AGAAATCTTTAGGAATTGTT+TGG + chr6_1:42982057-42982076 Msa0885820:intron 25.0%
! TTTGACAACATGAACAATAT+CGG + chr6_1:42982185-42982204 Msa0885820:intron 25.0%
! GAATGAAAGTAATCAAATTG+AGG + chr6_1:42982446-42982465 Msa0885820:intron 25.0%
!!! TTGGTTTGTTATAATCTCTT+TGG + chr6_1:42982510-42982529 Msa0885820:intron 25.0%
! TTTCAATTCAACAAAAAGAG+TGG - chr6_1:42982538-42982557 None:intergenic 25.0%
! TGACATAAATGCTAAAAAAG+TGG - chr6_1:42982565-42982584 None:intergenic 25.0%
! TAAATGTATAGGCATGTATT+GGG + chr6_1:42982736-42982755 Msa0885820:intron 25.0%
!! TTGCACAAATTGATTTAAAC+GGG + chr6_1:42982930-42982949 Msa0885820:intron 25.0%
! TCCTGATATTAAAAAATTCC+TGG + chr6_1:42983272-42983291 Msa0885820:CDS 25.0%
! TATACATAACAAGGGATAAA+AGG - chr6_1:42983498-42983517 None:intergenic 25.0%
!!! CGATTGTTTTATACATAACA+AGG - chr6_1:42983507-42983526 None:intergenic 25.0%
! GAAAATAAATAAGCATGTGA+AGG - chr6_1:42983546-42983565 None:intergenic 25.0%
! AGAAATCTTCTTATGTAATG+AGG - chr6_1:42984002-42984021 None:intergenic 25.0%
!! TTACTAATGATCATTTTGAG+TGG + chr6_1:42984119-42984138 Msa0885820:intron 25.0%
! TCATAAGCCTTACATATTTA+GGG - chr6_1:42984171-42984190 None:intergenic 25.0%
! ATCATAAGCCTTACATATTT+AGG - chr6_1:42984172-42984191 None:intergenic 25.0%
!! CAAATTGAATTGTTTTCTTG+TGG + chr6_1:42984502-42984521 Msa0885820:intron 25.0%
! GAATGTTCTTAAATAACACA+TGG - chr6_1:42984655-42984674 None:intergenic 25.0%
! TGCATTGGAGTAATAAAAAT+AGG - chr6_1:42984679-42984698 None:intergenic 25.0%
!!! ACTTTTGATTTTTCTAGCAT+TGG - chr6_1:42984771-42984790 None:intergenic 25.0%
!!! ACAATTTTAGAACATTGCAT+TGG + chr6_1:42984808-42984827 Msa0885820:intron 25.0%
! CTGTTATATAATGAAACCTA+GGG + chr6_1:42985050-42985069 Msa0885820:intron 25.0%
!! ACTAATAATCTGATAGTGAA+TGG - chr6_1:42985094-42985113 None:intergenic 25.0%
! TTCACTATCAGATTATTAGT+TGG + chr6_1:42985094-42985113 Msa0885820:intron 25.0%
! TATCAGATTATTAGTTGGAT+TGG + chr6_1:42985099-42985118 Msa0885820:intron 25.0%
!!! ATTTTTTGAAGTCTCATCTT+AGG + chr6_1:42985977-42985996 Msa0885820:intron 25.0%
! TATGAATTGAGTTCAAAGAT+CGG - chr6_1:42986116-42986135 None:intergenic 25.0%
! TTAATGAACATAGAAAATGG+AGG + chr6_1:42986249-42986268 Msa0885820:intron 25.0%
! AAAAAGTAATACAGGTAAGT+GGG - chr6_1:42986583-42986602 None:intergenic 25.0%
!!! TTACTTTTTCATTTAAACGC+AGG + chr6_1:42986594-42986613 Msa0885820:intron 25.0%
!!! TACTTTTTCATTTAAACGCA+GGG + chr6_1:42986595-42986614 Msa0885820:intron 25.0%
! AAAAAAGAAGGTAGAATGAA+GGG - chr6_1:42986762-42986781 None:intergenic 25.0%
! AAAAAAAGAAGGTAGAATGA+AGG - chr6_1:42986763-42986782 None:intergenic 25.0%
!! GTAGTCAATCTAAAATTGAA+TGG - chr6_1:42986815-42986834 None:intergenic 25.0%
! CTATAATGTGAGTAAAAGTA+TGG - chr6_1:42987010-42987029 None:intergenic 25.0%
!!! TACTACTTTGTTGTTGTATT+CGG + chr6_1:42987176-42987195 Msa0885820:intron 25.0%
! AACAAGTTTGGTTACTAAAA+AGG + chr6_1:42987235-42987254 Msa0885820:CDS 25.0%
ATAGTTTGAAGAGAGAGAAA+CGG - chr6_1:42980386-42980405 None:intergenic 30.0%
TTGAGGATAAGACATTTGAA+AGG + chr6_1:42980534-42980553 Msa0885820:CDS 30.0%
!!! GGAATGGTTTTGGAAATTAT+AGG + chr6_1:42980852-42980871 Msa0885820:intron 30.0%
!! CACTTCTATTTTTCAATGGT+TGG + chr6_1:42981113-42981132 Msa0885820:intron 30.0%
!!! TGGTTGGTTTTGAATATTTC+AGG + chr6_1:42981129-42981148 Msa0885820:intron 30.0%
!!! GGTTGGTTTTGAATATTTCA+GGG + chr6_1:42981130-42981149 Msa0885820:intron 30.0%
! ATTTTTACTTTGTATGTGGG+TGG + chr6_1:42981183-42981202 Msa0885820:intron 30.0%
!! CTCTAGAATGTGATAGAAAA+TGG + chr6_1:42981269-42981288 Msa0885820:intron 30.0%
AGAATGTGATAGAAAATGGT+TGG + chr6_1:42981273-42981292 Msa0885820:intron 30.0%
!!! TGATAGAAAATGGTTGGTTT+TGG + chr6_1:42981279-42981298 Msa0885820:intron 30.0%
!!! GTTGGTTTTGGAAATGTTTA+TGG + chr6_1:42981291-42981310 Msa0885820:intron 30.0%
AAATGTTTATGGTTGTGTGT+AGG + chr6_1:42981302-42981321 Msa0885820:intron 30.0%
!!! TTGGTTTTGGAAAACGTTTA+GGG + chr6_1:42981433-42981452 Msa0885820:intron 30.0%
! TATGTTGTTTGTGTATGTGT+TGG + chr6_1:42981661-42981680 Msa0885820:intron 30.0%
! GGCACAATATTGATTAAATG+TGG + chr6_1:42981714-42981733 Msa0885820:intron 30.0%
ATGTGTTAGTGTGATGTATA+TGG + chr6_1:42981781-42981800 Msa0885820:intron 30.0%
! ATTTTTACTTTGAATGTGGG+TGG + chr6_1:42981857-42981876 Msa0885820:intron 30.0%
! GCTGGAATTACATTTTGTTA+TGG + chr6_1:42981879-42981898 Msa0885820:intron 30.0%
GTAACAATTGTAATAGAGAG+AGG + chr6_1:42982003-42982022 Msa0885820:intron 30.0%
GTGCAATTTCAGAAATCTTT+AGG + chr6_1:42982047-42982066 Msa0885820:intron 30.0%
!! TTTAACAAACACTGGTTTCA+AGG + chr6_1:42982258-42982277 Msa0885820:intron 30.0%
TATGTCTTAGAGTTTGTGTT+GGG + chr6_1:42982302-42982321 Msa0885820:intron 30.0%
ACTTTATTAGGATAGCGATA+TGG - chr6_1:42982363-42982382 None:intergenic 30.0%
ATATCGCTATCCTAATAAAG+TGG + chr6_1:42982362-42982381 Msa0885820:intron 30.0%
TGTTGAGAATCCACTTTATT+AGG - chr6_1:42982375-42982394 None:intergenic 30.0%
! AATCAAATTGAGGTAGCTTT+TGG + chr6_1:42982456-42982475 Msa0885820:intron 30.0%
AACATGAAATCGAACACATA+TGG + chr6_1:42982613-42982632 Msa0885820:intron 30.0%
GTAAATGTATAGGCATGTAT+TGG + chr6_1:42982735-42982754 Msa0885820:intron 30.0%
AAATGTATAGGCATGTATTG+GGG + chr6_1:42982737-42982756 Msa0885820:intron 30.0%
! TGTTTCTGTAGTTACTAAGA+CGG + chr6_1:42982778-42982797 Msa0885820:intron 30.0%
!!! GCCAGGAATTTTTTAATATC+AGG - chr6_1:42983276-42983295 None:intergenic 30.0%
! CTTTTAATGCAGATATGTAG+TGG + chr6_1:42983611-42983630 Msa0885820:intron 30.0%
! TTGACTTCTTTTAATCTTGC+AGG + chr6_1:42983922-42983941 Msa0885820:intron 30.0%
! CATGATTTTATCAAACTTGC+TGG + chr6_1:42984031-42984050 Msa0885820:CDS 30.0%
! TAATGAATCCAGTTTGTTCT+CGG - chr6_1:42984059-42984078 None:intergenic 30.0%
AATGAGACCCTAAATATGTA+AGG + chr6_1:42984161-42984180 Msa0885820:intron 30.0%
TCTACATTAACTATAACGTG+TGG - chr6_1:42984275-42984294 None:intergenic 30.0%
CTTCTTATTATGGCAGTTAT+GGG - chr6_1:42984433-42984452 None:intergenic 30.0%
ACTTCTTATTATGGCAGTTA+TGG - chr6_1:42984434-42984453 None:intergenic 30.0%
AGCAGTTAGACTTCTTATTA+TGG - chr6_1:42984443-42984462 None:intergenic 30.0%
! ACTATTTCACCAATGAGTTT+TGG + chr6_1:42984472-42984491 Msa0885820:intron 30.0%
TGCTATATACCAAAACTCAT+TGG - chr6_1:42984484-42984503 None:intergenic 30.0%
!!! TAATTTCCTTGCATTGGTTT+TGG - chr6_1:42984580-42984599 None:intergenic 30.0%
CGTAATTAATTTCCTTGCAT+TGG - chr6_1:42984586-42984605 None:intergenic 30.0%
!!! TGTTCTTGAGTTACTTTTAG+TGG + chr6_1:42984618-42984637 Msa0885820:intron 30.0%
!!! GTTCTTGAGTTACTTTTAGT+GGG + chr6_1:42984619-42984638 Msa0885820:intron 30.0%
TAAATAACACATGGCAACTT+GGG - chr6_1:42984646-42984665 None:intergenic 30.0%
TTAAATAACACATGGCAACT+TGG - chr6_1:42984647-42984666 None:intergenic 30.0%
AATCGTAGTTGTGTTCTTAA+TGG + chr6_1:42984701-42984720 Msa0885820:intron 30.0%
! GATGCTTTTATGTTTTCAAC+TGG + chr6_1:42984832-42984851 Msa0885820:intron 30.0%
CCTAGGTTTCATTATATAAC+AGG - chr6_1:42985052-42985071 None:intergenic 30.0%
CCTGTTATATAATGAAACCT+AGG + chr6_1:42985049-42985068 Msa0885820:intron 30.0%
TATATGGAAAAATACACCCT+AGG - chr6_1:42985069-42985088 None:intergenic 30.0%
!!! GATGTTGTTTTGATTTACCT+TGG + chr6_1:42985121-42985140 Msa0885820:intron 30.0%
ATATCTACTGTGAATTACCA+TGG + chr6_1:42985278-42985297 Msa0885820:CDS 30.0%
TATCTACTGTGAATTACCAT+GGG + chr6_1:42985279-42985298 Msa0885820:CDS 30.0%
CTGTCAACTGTTGAAATTTA+AGG + chr6_1:42985440-42985459 Msa0885820:intron 30.0%
TCTTTATGCCACTAAATCTA+TGG + chr6_1:42985528-42985547 Msa0885820:intron 30.0%
AACACAGCTTATTTAATCTG+TGG + chr6_1:42985651-42985670 Msa0885820:intron 30.0%
! TTTAATCTGTGGTGTCAAAT+TGG + chr6_1:42985662-42985681 Msa0885820:intron 30.0%
! TTAATCTGTGGTGTCAAATT+GGG + chr6_1:42985663-42985682 Msa0885820:intron 30.0%
TGTTGTCAAACATTAGCTAT+AGG + chr6_1:42985801-42985820 Msa0885820:intron 30.0%
AATACCTGTGGAAACATTAT+CGG + chr6_1:42986020-42986039 Msa0885820:intron 30.0%
TTATTCTAGTAGTTAGACCA+AGG + chr6_1:42986046-42986065 Msa0885820:intron 30.0%
GTTTGATCTATAGTATTCCT+TGG - chr6_1:42986066-42986085 None:intergenic 30.0%
ATGAATTGAGTTCAAAGATC+GGG - chr6_1:42986115-42986134 None:intergenic 30.0%
! CAATTCATAACAGAGCATTA+TGG + chr6_1:42986127-42986146 Msa0885820:intron 30.0%
! AAAACTTTTCACACAATGTC+AGG - chr6_1:42986181-42986200 None:intergenic 30.0%
TTTAACAACATTTGAGCTCA+TGG + chr6_1:42986489-42986508 Msa0885820:intron 30.0%
GAAAAAGTAATACAGGTAAG+TGG - chr6_1:42986584-42986603 None:intergenic 30.0%
! AAGTAAATATGCAAGAGCAT+TGG - chr6_1:42986982-42987001 None:intergenic 30.0%
! ATTAGAAGATTTTACCTGCA+TGG + chr6_1:42987051-42987070 Msa0885820:intron 30.0%
TACTAAAAAGGACTATAGCT+TGG + chr6_1:42987247-42987266 Msa0885820:CDS 30.0%
AAAAAAGAACGAGAATTTGG+AGG + chr6_1:42987292-42987311 Msa0885820:CDS 30.0%
GAGAAGAAAGAACAAAAATG+TGG + chr6_1:42987370-42987389 Msa0885820:CDS 30.0%
TGGTTAAACCTTCAAAAGTT+AGG + chr6_1:42987390-42987409 Msa0885820:CDS 30.0%
GGTTAAACCTTCAAAAGTTA+GGG + chr6_1:42987391-42987410 Msa0885820:CDS 30.0%
TTCTTCAGATAATAAGCGAA+CGG + chr6_1:42987661-42987680 Msa0885820:CDS 30.0%
! AAGTTTAGAACGTGTAGATT+TGG - chr6_1:42987705-42987724 None:intergenic 30.0%
AAATGTTTGTCTCTTATCTG+AGG - chr6_1:42987762-42987781 None:intergenic 30.0%
TAGTTTGAAGAGAGAGAAAC+GGG - chr6_1:42980385-42980404 None:intergenic 35.0%
AGGATAAGACATTTGAAAGG+TGG + chr6_1:42980537-42980556 Msa0885820:CDS 35.0%
GAAATTATAGGGTTGTGTGT+AGG + chr6_1:42980864-42980883 Msa0885820:intron 35.0%
GCTTGAATGGCATTTGATTA+TGG + chr6_1:42981205-42981224 Msa0885820:intron 35.0%
TTTATGGTTGTGTGTAGGAT+GGG + chr6_1:42981307-42981326 Msa0885820:intron 35.0%
TGAAACGATATTGACACATG+TGG + chr6_1:42981372-42981391 Msa0885820:intron 35.0%
!!! GTTGGTTTTGGAAAACGTTT+AGG + chr6_1:42981432-42981451 Msa0885820:intron 35.0%
GTTTGTCTATCTGTCTCTAT+CGG + chr6_1:42981599-42981618 Msa0885820:intron 35.0%
CCAGTATAACGTAACAGAAT+TGG - chr6_1:42982216-42982235 None:intergenic 35.0%
CCAATTCTGTTACGTTATAC+TGG + chr6_1:42982213-42982232 Msa0885820:intron 35.0%
! AGCTGCTATTTAACAAACAC+TGG + chr6_1:42982250-42982269 Msa0885820:intron 35.0%
GTATGTCTTAGAGTTTGTGT+TGG + chr6_1:42982301-42982320 Msa0885820:intron 35.0%
GGACTCAATAGTAAAAGCAA+TGG - chr6_1:42982342-42982361 None:intergenic 35.0%
AGAGTATGGAACAAGTTGTT+TGG + chr6_1:42982491-42982510 Msa0885820:intron 35.0%
! ATTGTCGATTACTTGATGTG+TGG + chr6_1:42982666-42982685 Msa0885820:intron 35.0%
! TTGTCGATTACTTGATGTGT+GGG + chr6_1:42982667-42982686 Msa0885820:intron 35.0%
GTTTCTGTAGTTACTAAGAC+GGG + chr6_1:42982779-42982798 Msa0885820:intron 35.0%
TTGATTTAAACGGGCGTTAT+AGG + chr6_1:42982939-42982958 Msa0885820:intron 35.0%
ACTTAGTAACCCCATTGATA+TGG + chr6_1:42983053-42983072 Msa0885820:CDS 35.0%
TACCAACTACCATATCAATG+GGG - chr6_1:42983065-42983084 None:intergenic 35.0%
GTACCAACTACCATATCAAT+GGG - chr6_1:42983066-42983085 None:intergenic 35.0%
ATTCTTCAACATATCGAGGA+AGG + chr6_1:42983096-42983115 Msa0885820:CDS 35.0%
ACATATCGAGGAAGGAAATA+TGG + chr6_1:42983104-42983123 Msa0885820:CDS 35.0%
GAGGAAGGAAATATGGTATA+CGG + chr6_1:42983111-42983130 Msa0885820:CDS 35.0%
! TGTTTTGCAGGTATTAGATG+AGG + chr6_1:42983221-42983240 Msa0885820:intron 35.0%
!! TTTGAAGCGCGATGTTTTAA+CGG - chr6_1:42983300-42983319 None:intergenic 35.0%
AAATCAGCATACCTTTGTCA+TGG - chr6_1:42983364-42983383 None:intergenic 35.0%
ATTATCGGTGTAGAAAACAG+AGG - chr6_1:42983702-42983721 None:intergenic 35.0%
AAGTCAACACTTTGCATCTT+CGG - chr6_1:42983909-42983928 None:intergenic 35.0%
CAAACTGGATTCATTACTTC+AGG + chr6_1:42984063-42984082 Msa0885820:CDS 35.0%
!! GTAGACACTGACTTTATTGA+TGG + chr6_1:42984220-42984239 Msa0885820:intron 35.0%
ATCCAAGAAATTAGAGAGCT+TGG + chr6_1:42984338-42984357 Msa0885820:intron 35.0%
!!! GTTTTTGAATGGTTTTGGGA+TGG - chr6_1:42984369-42984388 None:intergenic 35.0%
GCAGTAATTATGTCAGTCAT+CGG - chr6_1:42984411-42984430 None:intergenic 35.0%
! TTGTTTTCTTGTGGAACTGA+TGG + chr6_1:42984511-42984530 Msa0885820:intron 35.0%
!! GCTCTAAAGTATCGAAGAAT+TGG - chr6_1:42984553-42984572 None:intergenic 35.0%
AAATAACACATGGCAACTTG+GGG - chr6_1:42984645-42984664 None:intergenic 35.0%
! CACAACTACGATTTTTGCAT+TGG - chr6_1:42984694-42984713 None:intergenic 35.0%
GTTGTGTTCTTAATGGTAGT+TGG + chr6_1:42984708-42984727 Msa0885820:intron 35.0%
AATAACATGGCGTCATAGTT+TGG - chr6_1:42984916-42984935 None:intergenic 35.0%
ATGTTACTGGCATGGAAAAA+CGG - chr6_1:42984963-42984982 None:intergenic 35.0%
TGCAATAAAGTGCATGTTAC+TGG - chr6_1:42984976-42984995 None:intergenic 35.0%
! CTGATAGTGAATGGCATATA+TGG - chr6_1:42985085-42985104 None:intergenic 35.0%
ATATGTGATCATCTGATTGC+AGG + chr6_1:42985157-42985176 Msa0885820:intron 35.0%
TTCTTCAAGAAAGTGATCCA+CGG - chr6_1:42985252-42985271 None:intergenic 35.0%
ATCTACTGTGAATTACCATG+GGG + chr6_1:42985280-42985299 Msa0885820:CDS 35.0%
CACAAGTTCAGTACAGTATT+TGG - chr6_1:42985360-42985379 None:intergenic 35.0%
TGTGATTTACAAATCCACCA+GGG - chr6_1:42985606-42985625 None:intergenic 35.0%
! ATCACAGGCTTACATTTTCA+TGG + chr6_1:42985620-42985639 Msa0885820:intron 35.0%
TGAGCCAAAACAGTTAACAT+GGG - chr6_1:42985707-42985726 None:intergenic 35.0%
TAGCTAATGTTTGACAACAC+TGG - chr6_1:42985800-42985819 None:intergenic 35.0%
TAAATAGAGGCTACTGTTAC+CGG + chr6_1:42985885-42985904 Msa0885820:intron 35.0%
!!! TTTTGAAGTCTCATCTTAGG+TGG + chr6_1:42985980-42985999 Msa0885820:intron 35.0%
TGAATTGAGTTCAAAGATCG+GGG - chr6_1:42986114-42986133 None:intergenic 35.0%
ACATAGAAAATGGAGGAAGA+TGG + chr6_1:42986256-42986275 Msa0885820:intron 35.0%
CATAGAAAATGGAGGAAGAT+GGG + chr6_1:42986257-42986276 Msa0885820:intron 35.0%
!! CCTATAGTCTTGTCAAATAG+AGG - chr6_1:42986371-42986390 None:intergenic 35.0%
CCTCTATTTGACAAGACTAT+AGG + chr6_1:42986368-42986387 Msa0885820:intron 35.0%
TTGACATTCTCTCATCAGAT+CGG + chr6_1:42986537-42986556 Msa0885820:intron 35.0%
!! TGTTACTCTTGAACTTGTTG+AGG - chr6_1:42986628-42986647 None:intergenic 35.0%
AAATCTGTGCAAACCAATGT+GGG - chr6_1:42986662-42986681 None:intergenic 35.0%
TGCAGGGAAAATAACAAGTT+TGG + chr6_1:42987223-42987242 Msa0885820:intron 35.0%
! TTTTATTGCCTCCTCTATCT+TGG - chr6_1:42987276-42987295 None:intergenic 35.0%
! GATTTGTCCCTAACTTTTGA+AGG - chr6_1:42987401-42987420 None:intergenic 35.0%
CCTTTCTTCGTAAACTTTGA+TGG - chr6_1:42987587-42987606 None:intergenic 35.0%
CCATCAAAGTTTACGAAGAA+AGG + chr6_1:42987584-42987603 Msa0885820:CDS 35.0%
TTTCTTGAAGCTACTTGTAC+TGG - chr6_1:42987639-42987658 None:intergenic 35.0%
TCTTCAGATAATAAGCGAAC+GGG + chr6_1:42987662-42987681 Msa0885820:CDS 35.0%
! TTTAGAACGTGTAGATTTGG+AGG - chr6_1:42987702-42987721 None:intergenic 35.0%
! CGTTCTAAACTTAGTGTTGT+CGG + chr6_1:42987713-42987732 Msa0885820:CDS 35.0%
AACTTAGTGTTGTCGGATTT+AGG + chr6_1:42987720-42987739 Msa0885820:CDS 35.0%
ACTTAGTGTTGTCGGATTTA+GGG + chr6_1:42987721-42987740 Msa0885820:CDS 35.0%
! GAGAGTGAAGAGAGTTTTTC+TGG - chr6_1:42980340-42980359 None:intergenic 40.0%
! GAAGAGGGATGATGAGTTTT+GGG - chr6_1:42980409-42980428 None:intergenic 40.0%
!! AGAATGGTGTGAAGCGTTTT+GGG - chr6_1:42980431-42980450 None:intergenic 40.0%
! CCGAGTGTTTTTCTTGATCA+GGG - chr6_1:42980500-42980519 None:intergenic 40.0%
CCCTGATCAAGAAAAACACT+CGG + chr6_1:42980497-42980516 Msa0885820:CDS 40.0%
! ACCGAGTGTTTTTCTTGATC+AGG - chr6_1:42980501-42980520 None:intergenic 40.0%
AGACATTTGAAAGGTGGAAG+TGG + chr6_1:42980543-42980562 Msa0885820:CDS 40.0%
TGGGAGTAGGAATGATGAAA+GGG + chr6_1:42980569-42980588 Msa0885820:CDS 40.0%
!!! GTGTTGTTGGGAGTTTTGAA+GGG + chr6_1:42980655-42980674 Msa0885820:CDS 40.0%
!!! AGTTTTGAAGGGTTGGGATT+AGG + chr6_1:42980666-42980685 Msa0885820:CDS 40.0%
!!! GTTTTGAAGGGTTGGGATTA+GGG + chr6_1:42980667-42980686 Msa0885820:CDS 40.0%
!! TTTTGAAGGGTTGGGATTAG+GGG + chr6_1:42980668-42980687 Msa0885820:CDS 40.0%
CCAATACACTGAATCTCAGT+AGG - chr6_1:42980735-42980754 None:intergenic 40.0%
CCTACTGAGATTCAGTGTAT+TGG + chr6_1:42980732-42980751 Msa0885820:CDS 40.0%
! GATTCAGTGTATTGGTGTTC+CGG + chr6_1:42980740-42980759 Msa0885820:CDS 40.0%
!! ATGGGAAGAGTGTTGTGTTA+GGG + chr6_1:42980772-42980791 Msa0885820:CDS 40.0%
TTGTGTTAGGGTCTCATACT+GGG + chr6_1:42980784-42980803 Msa0885820:CDS 40.0%
! TTATTTGTTGCCGCTTGTTC+AGG + chr6_1:42980824-42980843 Msa0885820:intron 40.0%
ATTCCCATTACCTGAACAAG+CGG - chr6_1:42980837-42980856 None:intergenic 40.0%
!!! TCAGGTAATGGGAATGGTTT+TGG + chr6_1:42980842-42980861 Msa0885820:intron 40.0%
ACACCTTCAATACATGGTGT+CGG - chr6_1:42981036-42981055 None:intergenic 40.0%
CCAAACACACCTTCAATACA+TGG - chr6_1:42981042-42981061 None:intergenic 40.0%
! CCATGTATTGAAGGTGTGTT+TGG + chr6_1:42981039-42981058 Msa0885820:intron 40.0%
TGAGACGATATTGACACATG+TGG + chr6_1:42981079-42981098 Msa0885820:intron 40.0%
AAATGTTAGATAGCGAAGGC+AGG + chr6_1:42981240-42981259 Msa0885820:intron 40.0%
GTTTATGGTTGTGTGTAGGA+TGG + chr6_1:42981306-42981325 Msa0885820:intron 40.0%
! CGTGTCTAGTTTCTGATGTA+TGG + chr6_1:42981346-42981365 Msa0885820:intron 40.0%
TGACACATGTGGTTACGTTT+AGG + chr6_1:42981383-42981402 Msa0885820:intron 40.0%
GACACATGTGGTTACGTTTA+GGG + chr6_1:42981384-42981403 Msa0885820:intron 40.0%
! GTTTAGGGTTGTTCAGGTAA+TGG + chr6_1:42981399-42981418 Msa0885820:intron 40.0%
! GTTGTTCAGGTAATGGCAAT+AGG + chr6_1:42981406-42981425 Msa0885820:intron 40.0%
! TTCAGGTAATGGCAATAGGT+TGG + chr6_1:42981410-42981429 Msa0885820:intron 40.0%
! TTGGAAAACGTTTAGGGTTG+TGG + chr6_1:42981439-42981458 Msa0885820:intron 40.0%
! TGGAAAACGTTTAGGGTTGT+GGG + chr6_1:42981440-42981459 Msa0885820:intron 40.0%
CCACAATAACACATAGACAC+TGG - chr6_1:42981580-42981599 None:intergenic 40.0%
! CCAGTGTCTATGTGTTATTG+TGG + chr6_1:42981577-42981596 Msa0885820:intron 40.0%
ACAACATACATTGACACGTG+TGG - chr6_1:42981649-42981668 None:intergenic 40.0%
GTGCCTCTAATACAAGTTGT+CGG - chr6_1:42981699-42981718 None:intergenic 40.0%
TGTAATAGAGAGAGGAAGCA+AGG + chr6_1:42982011-42982030 Msa0885820:intron 40.0%
AATTGTTTGGCATGACCCAT+TGG + chr6_1:42982070-42982089 Msa0885820:intron 40.0%
GAGCAAGTGATTGAGTGTAA+CGG - chr6_1:42982163-42982182 None:intergenic 40.0%
!!! AACACCGTGGTTTTTTTCAC+CGG + chr6_1:42982391-42982410 Msa0885820:intron 40.0%
CAATCCGGTGAAAAAAACCA+CGG - chr6_1:42982398-42982417 None:intergenic 40.0%
! TTGAGGTAGCTTTTGGCATA+TGG + chr6_1:42982463-42982482 Msa0885820:intron 40.0%
TAAGTCATCATGCACGATTC+AGG + chr6_1:42982983-42983002 Msa0885820:CDS 40.0%
TTACTAAGTGACTCCTCTTG+AGG - chr6_1:42983042-42983061 None:intergenic 40.0%
AACCCCATTGATATGGTAGT+TGG + chr6_1:42983060-42983079 Msa0885820:CDS 40.0%
GGTACCAACTACCATATCAA+TGG - chr6_1:42983067-42983086 None:intergenic 40.0%
TATGTTGAAGAATCCTGCCA+GGG - chr6_1:42983089-42983108 None:intergenic 40.0%
ATATGTTGAAGAATCCTGCC+AGG - chr6_1:42983090-42983109 None:intergenic 40.0%
CAGGATTCTTCAACATATCG+AGG + chr6_1:42983092-42983111 Msa0885820:CDS 40.0%
ATACGGTGACATCCAATATG+TGG + chr6_1:42983128-42983147 Msa0885820:CDS 40.0%
GAAGGACACTTACCACATAT+TGG - chr6_1:42983143-42983162 None:intergenic 40.0%
!!! GACAGTAGTCTTTGTTTTGC+AGG + chr6_1:42983209-42983228 Msa0885820:intron 40.0%
AGGCAGACACAATGTTTGAT+CGG + chr6_1:42983241-42983260 Msa0885820:CDS 40.0%
!!! TTGAAGCGCGATGTTTTAAC+GGG - chr6_1:42983299-42983318 None:intergenic 40.0%
TTGCAGTTACCAAAACAGTC+TGG - chr6_1:42983341-42983360 None:intergenic 40.0%
!! CATAGGCGGTTTAATTTGCT+AGG - chr6_1:42983769-42983788 None:intergenic 40.0%
CTAGCAAATTAAACCGCCTA+TGG + chr6_1:42983767-42983786 Msa0885820:intron 40.0%
! TGTGCAAAATCTGGTTGATG+AGG + chr6_1:42983946-42983965 Msa0885820:CDS 40.0%
GACCAAGCTCTCTAATTTCT+TGG - chr6_1:42984343-42984362 None:intergenic 40.0%
TTCCAAAGGAAAACCTTGGT+GGG - chr6_1:42984886-42984905 None:intergenic 40.0%
TTTCCAAAGGAAAACCTTGG+TGG - chr6_1:42984887-42984906 None:intergenic 40.0%
!! ACCAAGGTTTTCCTTTGGAA+AGG + chr6_1:42984886-42984905 Msa0885820:intron 40.0%
!! CCAAGGTTTTCCTTTGGAAA+GGG + chr6_1:42984887-42984906 Msa0885820:intron 40.0%
TGTTACTGGCATGGAAAAAC+GGG - chr6_1:42984962-42984981 None:intergenic 40.0%
TAAAGTGCATGTTACTGGCA+TGG - chr6_1:42984971-42984990 None:intergenic 40.0%
TTAGAGCCAAGTCTTGCAAA+GGG + chr6_1:42985182-42985201 Msa0885820:CDS 40.0%
AAGTCTTGCAAAGGGTAACA+GGG + chr6_1:42985190-42985209 Msa0885820:CDS 40.0%
TGCCACTAAATCTATGGCTA+CGG + chr6_1:42985534-42985553 Msa0885820:intron 40.0%
CTGTGATTTACAAATCCACC+AGG - chr6_1:42985607-42985626 None:intergenic 40.0%
!! CTGGTGGATTTGTAAATCAC+AGG + chr6_1:42985605-42985624 Msa0885820:intron 40.0%
GTCAAATTGGGTTCAACTTG+TGG + chr6_1:42985675-42985694 Msa0885820:intron 40.0%
CCAAAACAGTTAACATGGGT+TGG - chr6_1:42985703-42985722 None:intergenic 40.0%
! CCAACCCATGTTAACTGTTT+TGG + chr6_1:42985700-42985719 Msa0885820:intron 40.0%
GTGAGCCAAAACAGTTAACA+TGG - chr6_1:42985708-42985727 None:intergenic 40.0%
TTGGCTCACTTTGACACTTA+TGG + chr6_1:42985719-42985738 Msa0885820:intron 40.0%
! GCAACAATACTTCCTGCTTT+TGG + chr6_1:42985747-42985766 Msa0885820:intron 40.0%
TAGTGACACGCAATTTGATC+CGG - chr6_1:42985907-42985926 None:intergenic 40.0%
AGTCTCATCTTAGGTGGTTT+AGG + chr6_1:42985986-42986005 Msa0885820:intron 40.0%
AACTCCGATAATGTTTCCAC+AGG - chr6_1:42986027-42986046 None:intergenic 40.0%
GTCAGGACATACATGAATCA+AGG - chr6_1:42986164-42986183 None:intergenic 40.0%
TTGTCAAATAGAGGCTATGG+TGG - chr6_1:42986362-42986381 None:intergenic 40.0%
GTCTTGTCAAATAGAGGCTA+TGG - chr6_1:42986365-42986384 None:intergenic 40.0%
! AAATAGCAGGTATTGCGTAG+CGG - chr6_1:42986433-42986452 None:intergenic 40.0%
!! TACCTGCTATTTGATAACGC+TGG + chr6_1:42986441-42986460 Msa0885820:intron 40.0%
ATCCAGCGTTATCAAATAGC+AGG - chr6_1:42986446-42986465 None:intergenic 40.0%
!! TGCTATTTGATAACGCTGGA+TGG + chr6_1:42986445-42986464 Msa0885820:intron 40.0%
!! GCTATTTGATAACGCTGGAT+GGG + chr6_1:42986446-42986465 Msa0885820:intron 40.0%
! TCAAAGCACTAGCACTCAAA+TGG - chr6_1:42986517-42986536 None:intergenic 40.0%
TACAGGTAAGTGGGAATAAC+AGG - chr6_1:42986574-42986593 None:intergenic 40.0%
AATCTGTGCAAACCAATGTG+GGG - chr6_1:42986661-42986680 None:intergenic 40.0%
CAAATCTGTGCAAACCAATG+TGG - chr6_1:42986663-42986682 None:intergenic 40.0%
!! CACATTGGTTTGCACAGATT+TGG + chr6_1:42986661-42986680 Msa0885820:CDS 40.0%
AAGAAGGTAGAATGAAGGGA+GGG - chr6_1:42986758-42986777 None:intergenic 40.0%
AAAGAAGGTAGAATGAAGGG+AGG - chr6_1:42986759-42986778 None:intergenic 40.0%
! TGTTACCTTTTGCACCCATA+CGG - chr6_1:42986861-42986880 None:intergenic 40.0%
AAAACTTGCACAATCCATGC+AGG - chr6_1:42987068-42987087 None:intergenic 40.0%
ATCGGTCATTGCAATTGTGA+CGG + chr6_1:42987153-42987172 Msa0885820:intron 40.0%
! AAGACACTCTTTTCTGTTGC+AGG + chr6_1:42987206-42987225 Msa0885820:intron 40.0%
! AGACACTCTTTTCTGTTGCA+GGG + chr6_1:42987207-42987226 Msa0885820:intron 40.0%
!! CACAAAAGAAAGTGTCCGAA+TGG + chr6_1:42987319-42987338 Msa0885820:CDS 40.0%
TTCTTCTCTGCTCAGTGATT+TGG - chr6_1:42987358-42987377 None:intergenic 40.0%
TGACCTGGTATTCACAGAAT+CGG - chr6_1:42987435-42987454 None:intergenic 40.0%
CTTAGTGTTGTCGGATTTAG+GGG + chr6_1:42987722-42987741 Msa0885820:CDS 40.0%
TTAGTGTTGTCGGATTTAGG+GGG + chr6_1:42987723-42987742 Msa0885820:CDS 40.0%
TGAAGAGAGAGAAACGGGAT+GGG - chr6_1:42980380-42980399 None:intergenic 45.0%
TTGAAGAGAGAGAAACGGGA+TGG - chr6_1:42980381-42980400 None:intergenic 45.0%
! GGAAGAGGGATGATGAGTTT+TGG - chr6_1:42980410-42980429 None:intergenic 45.0%
!!! TGTGAAGCGTTTTGGGAAGA+GGG - chr6_1:42980424-42980443 None:intergenic 45.0%
!! GAGAATGGTGTGAAGCGTTT+TGG - chr6_1:42980432-42980451 None:intergenic 45.0%
! GTCAGATAGCAATGATGGTG+AGG - chr6_1:42980478-42980497 None:intergenic 45.0%
TCAGGGTCAGATAGCAATGA+TGG - chr6_1:42980483-42980502 None:intergenic 45.0%
GTCTTATCCTCAACCTCTCA+AGG - chr6_1:42980527-42980546 None:intergenic 45.0%
TTGAAAGGTGGAAGTGGAAG+TGG + chr6_1:42980549-42980568 Msa0885820:CDS 45.0%
TGAAAGGTGGAAGTGGAAGT+GGG + chr6_1:42980550-42980569 Msa0885820:CDS 45.0%
GTGGGAGTAGGAATGATGAA+AGG + chr6_1:42980568-42980587 Msa0885820:CDS 45.0%
GAGTAGGAATGATGAAAGGG+TGG + chr6_1:42980572-42980591 Msa0885820:CDS 45.0%
GGGGTGAAGAAGAAGAAAGA+GGG + chr6_1:42980609-42980628 Msa0885820:CDS 45.0%
GGGTGAAGAAGAAGAAAGAG+GGG + chr6_1:42980610-42980629 Msa0885820:CDS 45.0%
GGTGAAGAAGAAGAAAGAGG+GGG + chr6_1:42980611-42980630 Msa0885820:CDS 45.0%
!! AAAGAGGGGGTGTTTGATGA+GGG + chr6_1:42980624-42980643 Msa0885820:CDS 45.0%
!!! GGTGTTGTTGGGAGTTTTGA+AGG + chr6_1:42980654-42980673 Msa0885820:CDS 45.0%
!!! TGTTGGGAGTTTTGAAGGGT+TGG + chr6_1:42980659-42980678 Msa0885820:CDS 45.0%
!!! GTTGGGAGTTTTGAAGGGTT+GGG + chr6_1:42980660-42980679 Msa0885820:CDS 45.0%
GGATTAGGGGATGAGGTTAT+GGG + chr6_1:42980681-42980700 Msa0885820:CDS 45.0%
GATTAGGGGATGAGGTTATG+GGG + chr6_1:42980682-42980701 Msa0885820:CDS 45.0%
ATTAGGGGATGAGGTTATGG+GGG + chr6_1:42980683-42980702 Msa0885820:CDS 45.0%
TATGGGGGCTGTTAGAGAAA+TGG + chr6_1:42980698-42980717 Msa0885820:CDS 45.0%
ATGGGGGCTGTTAGAGAAAT+GGG + chr6_1:42980699-42980718 Msa0885820:CDS 45.0%
!! TATTGGTGTTCCGGCTGTTT+TGG + chr6_1:42980749-42980768 Msa0885820:CDS 45.0%
!! GATGGGAAGAGTGTTGTGTT+AGG + chr6_1:42980771-42980790 Msa0885820:CDS 45.0%
GTTGTGTTAGGGTCTCATAC+TGG + chr6_1:42980783-42980802 Msa0885820:CDS 45.0%
! TTGCCGCTTGTTCAGGTAAT+GGG + chr6_1:42980831-42980850 Msa0885820:intron 45.0%
!! GCTTGTTCAGGTAATGGGAA+TGG + chr6_1:42980836-42980855 Msa0885820:intron 45.0%
CCAACATCAGACACTAGACA+CGG - chr6_1:42980910-42980929 None:intergenic 45.0%
TTTACCTGCGTCTACGTGTT+TGG + chr6_1:42980979-42980998 Msa0885820:intron 45.0%
AAAACCAAACACGTAGACGC+AGG - chr6_1:42980986-42981005 None:intergenic 45.0%
GAACCGACACCATGTATTGA+AGG + chr6_1:42981030-42981049 Msa0885820:intron 45.0%
!! GTGTGTTTGGTGTCTGATGT+AGG + chr6_1:42981052-42981071 Msa0885820:intron 45.0%
TTGTATGTGGGTGGCTTGAA+TGG + chr6_1:42981192-42981211 Msa0885820:intron 45.0%
CTAGACACGCCTTCAATACA+AGG - chr6_1:42981335-42981354 None:intergenic 45.0%
! GGTTACGTTTAGGGTTGTTC+AGG + chr6_1:42981393-42981412 Msa0885820:intron 45.0%
!! GGTAATGGCAATAGGTTGGT+TGG + chr6_1:42981414-42981433 Msa0885820:intron 45.0%
!!! GGCAATAGGTTGGTTGGTTT+TGG + chr6_1:42981420-42981439 Msa0885820:intron 45.0%
! AAACGTTTAGGGTTGTGGGT+AGG + chr6_1:42981444-42981463 Msa0885820:intron 45.0%
! TTTAGGGTTGTGGGTAGGAT+TGG + chr6_1:42981449-42981468 Msa0885820:intron 45.0%
! GCACCGACAACTTGTATTAG+AGG + chr6_1:42981693-42981712 Msa0885820:intron 45.0%
TTACTTTGAATGTGGGTGGC+TGG + chr6_1:42981861-42981880 Msa0885820:intron 45.0%
AGACACGCCTTCAATCCAAT+GGG - chr6_1:42982088-42982107 None:intergenic 45.0%
TTCGACACTGATGCTAGACA+CGG + chr6_1:42982119-42982138 Msa0885820:intron 45.0%
! AAAGTGGATTCTCAACACCG+TGG + chr6_1:42982378-42982397 Msa0885820:intron 45.0%
! GGCATATGGACTACAGAGTA+TGG + chr6_1:42982477-42982496 Msa0885820:intron 45.0%
AGACGGGATGAGCAATTGAA+TGG + chr6_1:42982795-42982814 Msa0885820:intron 45.0%
TAGGGCATAACACAACAGCT+CGG - chr6_1:42982845-42982864 None:intergenic 45.0%
TGTTGTGTTATGCCCTACGA+GGG + chr6_1:42982848-42982867 Msa0885820:CDS 45.0%
TTCAGGTGTACCATGGTAAG+TGG + chr6_1:42983000-42983019 Msa0885820:CDS 45.0%
ATGTTGAAGAATCCTGCCAG+GGG - chr6_1:42983088-42983107 None:intergenic 45.0%
GGCAGACACAATGTTTGATC+GGG + chr6_1:42983242-42983261 Msa0885820:CDS 45.0%
GCAGACACAATGTTTGATCG+GGG + chr6_1:42983243-42983262 Msa0885820:CDS 45.0%
ACAATGTTTGATCGGGGCTT+TGG + chr6_1:42983249-42983268 Msa0885820:CDS 45.0%
!!! TGAAGCGCGATGTTTTAACG+GGG - chr6_1:42983298-42983317 None:intergenic 45.0%
CCAAAACAGTCTGGAAACCT+AGG - chr6_1:42983332-42983351 None:intergenic 45.0%
! CCTAGGTTTCCAGACTGTTT+TGG + chr6_1:42983329-42983348 Msa0885820:CDS 45.0%
GGTAACTGCAACCATGACAA+AGG + chr6_1:42983350-42983369 Msa0885820:CDS 45.0%
CTAAAGACGCTTCTCACATC+AGG - chr6_1:42983738-42983757 None:intergenic 45.0%
AGTTACACTAGAGCCATAGG+CGG - chr6_1:42983783-42983802 None:intergenic 45.0%
CCAAGTTACACTAGAGCCAT+AGG - chr6_1:42983786-42983805 None:intergenic 45.0%
!! CCTATGGCTCTAGTGTAACT+TGG + chr6_1:42983783-42983802 Msa0885820:intron 45.0%
!! CTGGTTGATGAGGAGTTTCA+AGG + chr6_1:42983956-42983975 Msa0885820:CDS 45.0%
! CTGATGGTGAGTGGTTTGTA+TGG + chr6_1:42984527-42984546 Msa0885820:intron 45.0%
! TTTCTAGCATTGGAGTCGAG+TGG - chr6_1:42984761-42984780 None:intergenic 45.0%
! TTCCCACCAAGGTTTTCCTT+TGG + chr6_1:42984881-42984900 Msa0885820:intron 45.0%
CCCTTTCCAAAGGAAAACCT+TGG - chr6_1:42984890-42984909 None:intergenic 45.0%
AGTTTGGAGACCCTTTCCAA+AGG - chr6_1:42984900-42984919 None:intergenic 45.0%
GTTACTGGCATGGAAAAACG+GGG - chr6_1:42984961-42984980 None:intergenic 45.0%
GTTAGAGCCAAGTCTTGCAA+AGG + chr6_1:42985181-42985200 Msa0885820:CDS 45.0%
CTGTTACCCTTTGCAAGACT+TGG - chr6_1:42985191-42985210 None:intergenic 45.0%
CAAGTCTTGCAAAGGGTAAC+AGG + chr6_1:42985189-42985208 Msa0885820:CDS 45.0%
TGCAAAGGGTAACAGGGTAA+TGG + chr6_1:42985196-42985215 Msa0885820:CDS 45.0%
ATTGAATTCTAGTCGTGCCG+TGG + chr6_1:42985232-42985251 Msa0885820:CDS 45.0%
TACTGTGAATTACCATGGGG+AGG + chr6_1:42985283-42985302 Msa0885820:CDS 45.0%
AGATGAGTTGTTAAGCCTCC+AGG + chr6_1:42985409-42985428 Msa0885820:intron 45.0%
!! TTGACAGTGCTATTTCCTGG+AGG - chr6_1:42985427-42985446 None:intergenic 45.0%
!! CAGTTGACAGTGCTATTTCC+TGG - chr6_1:42985430-42985449 None:intergenic 45.0%
CTCCGTAGCCATAGATTTAG+TGG - chr6_1:42985539-42985558 None:intergenic 45.0%
TTAGGTGGTTTAGGCATGTG+TGG + chr6_1:42985995-42986014 Msa0885820:intron 45.0%
TAGGTGGTTTAGGCATGTGT+GGG + chr6_1:42985996-42986015 Msa0885820:intron 45.0%
! TTGTCGTCTATCGTGGATTG+TGG + chr6_1:42986284-42986303 Msa0885820:intron 45.0%
TTTGCACAGATTTGGCTGCT+AGG + chr6_1:42986669-42986688 Msa0885820:CDS 45.0%
TTGCACAGATTTGGCTGCTA+GGG + chr6_1:42986670-42986689 Msa0885820:CDS 45.0%
GGGAGCTCACTGAATTCAAA+GGG - chr6_1:42986736-42986755 None:intergenic 45.0%
AGAAGGTAGAATGAAGGGAG+GGG - chr6_1:42986757-42986776 None:intergenic 45.0%
! GTTACCTTTTGCACCCATAC+GGG - chr6_1:42986860-42986879 None:intergenic 45.0%
ACAAATGACACGAAGCAGCA+TGG - chr6_1:42987110-42987129 None:intergenic 45.0%
TAGCTTGGCAACCAAGATAG+AGG + chr6_1:42987262-42987281 Msa0885820:CDS 45.0%
GGTTCCTGGTTACATCCATT+CGG - chr6_1:42987337-42987356 None:intergenic 45.0%
GATTCTGTGAATACCAGGTC+AGG + chr6_1:42987434-42987453 Msa0885820:CDS 45.0%
TGAATACCAGGTCAGGTACT+AGG + chr6_1:42987441-42987460 Msa0885820:CDS 45.0%
GAATACCAGGTCAGGTACTA+GGG + chr6_1:42987442-42987461 Msa0885820:CDS 45.0%
AGATCTGAGAATACCAGGTC+AGG + chr6_1:42987485-42987504 Msa0885820:CDS 45.0%
AGAATACCAGGTCAGGTACT+AGG + chr6_1:42987492-42987511 Msa0885820:CDS 45.0%
GAATACCAGGTCAGGTACTA+GGG + chr6_1:42987442-42987461 Msa0885820:CDS 45.0%
TGCCAGGTCAGGTACAAAAT+CGG + chr6_1:42987547-42987566 Msa0885820:CDS 45.0%
!!! TATTTTTATTTTGTAATAAA+TGG + chr6_1:42986938-42986957 Msa0885820:intron 5.0%
!!! GTGTGAAGCGTTTTGGGAAG+AGG - chr6_1:42980425-42980444 None:intergenic 50.0%
! GTGGTGGTGAGAGAAGAGAA+TGG - chr6_1:42980447-42980466 None:intergenic 50.0%
! TGATGGTGAGGATTGTGCTG+TGG - chr6_1:42980466-42980485 None:intergenic 50.0%
AACACTCGGTTCTCCTTGAG+AGG + chr6_1:42980511-42980530 Msa0885820:CDS 50.0%
GGAATGATGAAAGGGTGGTG+AGG + chr6_1:42980577-42980596 Msa0885820:CDS 50.0%
TGATGAAAGGGTGGTGAGGA+AGG + chr6_1:42980581-42980600 Msa0885820:CDS 50.0%
GGGGGTGAAGAAGAAGAAAG+AGG + chr6_1:42980608-42980627 Msa0885820:CDS 50.0%
!! GAAAGAGGGGGTGTTTGATG+AGG + chr6_1:42980623-42980642 Msa0885820:CDS 50.0%
!! AAGAGGGGGTGTTTGATGAG+GGG + chr6_1:42980625-42980644 Msa0885820:CDS 50.0%
GGGATTAGGGGATGAGGTTA+TGG + chr6_1:42980680-42980699 Msa0885820:CDS 50.0%
!! GTGTTCCGGCTGTTTTGGAT+GGG + chr6_1:42980754-42980773 Msa0885820:CDS 50.0%
CTCTTCCCATCCAAAACAGC+CGG - chr6_1:42980762-42980781 None:intergenic 50.0%
TTAGGGTCTCATACTGGGTC+TGG + chr6_1:42980789-42980808 Msa0885820:intron 50.0%
! GTTGCCGCTTGTTCAGGTAA+TGG + chr6_1:42980830-42980849 Msa0885820:intron 50.0%
CCGTGTCTAGTGTCTGATGT+TGG + chr6_1:42980907-42980926 Msa0885820:intron 50.0%
GGATGGGTGCCTTGTATTGA+AGG + chr6_1:42981323-42981342 Msa0885820:intron 50.0%
GGCATGACCCATTGGATTGA+AGG + chr6_1:42982078-42982097 Msa0885820:intron 50.0%
CAGACACGCCTTCAATCCAA+TGG - chr6_1:42982089-42982108 None:intergenic 50.0%
! CATTGGATTGAAGGCGTGTC+TGG + chr6_1:42982087-42982106 Msa0885820:intron 50.0%
AGGGCATAACACAACAGCTC+GGG - chr6_1:42982844-42982863 None:intergenic 50.0%
CTGTTGTGTTATGCCCTACG+AGG + chr6_1:42982847-42982866 Msa0885820:CDS 50.0%
GTTCAGACAACTCCCTCGTA+GGG - chr6_1:42982863-42982882 None:intergenic 50.0%
TGTTCAGACAACTCCCTCGT+AGG - chr6_1:42982864-42982883 None:intergenic 50.0%
TACGAGGGAGTTGTCTGAAC+AGG + chr6_1:42982863-42982882 Msa0885820:CDS 50.0%
TGCACGATTCAGGTGTACCA+TGG + chr6_1:42982993-42983012 Msa0885820:CDS 50.0%
AGGTGTACCATGGTAAGTGG+TGG + chr6_1:42983003-42983022 Msa0885820:CDS 50.0%
TGTACCATGGTAAGTGGTGG+TGG + chr6_1:42983006-42983025 Msa0885820:CDS 50.0%
ACTCCTCTTGAGGCCTTAGA+CGG - chr6_1:42983032-42983051 None:intergenic 50.0%
! GATATGGTAGTTGGTACCCC+TGG + chr6_1:42983069-42983088 Msa0885820:CDS 50.0%
GCTTCAAAACCTGACAGCCT+AGG + chr6_1:42983312-42983331 Msa0885820:CDS 50.0%
CTTGCAGGCTGTGCAAAATC+TGG + chr6_1:42983937-42983956 Msa0885820:intron 50.0%
! TGCTGGTACCGAGAACAAAC+TGG + chr6_1:42984048-42984067 Msa0885820:CDS 50.0%
! CTTGTGGAACTGATGGTGAG+TGG + chr6_1:42984518-42984537 Msa0885820:intron 50.0%
GCAGCACCAAAACCAATGCA+AGG + chr6_1:42984571-42984590 Msa0885820:intron 50.0%
TTAGTTCCCACTTCCCACCA+AGG + chr6_1:42984870-42984889 Msa0885820:intron 50.0%
GGAAAACCTTGGTGGGAAGT+GGG - chr6_1:42984879-42984898 None:intergenic 50.0%
AGGAAAACCTTGGTGGGAAG+TGG - chr6_1:42984880-42984899 None:intergenic 50.0%
! GAATTACCATGGGGAGGTAC+CGG + chr6_1:42985289-42985308 Msa0885820:CDS 50.0%
CTATGGCTACGGAGAGATTC+AGG + chr6_1:42985545-42985564 Msa0885820:intron 50.0%
TTACAAATCCACCAGGGAGC+CGG - chr6_1:42985600-42985619 None:intergenic 50.0%
GCTTGAGATGCTCCAAAAGC+AGG - chr6_1:42985762-42985781 None:intergenic 50.0%
AGGTGGTTTAGGCATGTGTG+GGG + chr6_1:42985997-42986016 Msa0885820:intron 50.0%
CAACGATGATTGCCCCACAT+TGG + chr6_1:42986646-42986665 Msa0885820:CDS 50.0%
TGCACAGATTTGGCTGCTAG+GGG + chr6_1:42986671-42986690 Msa0885820:CDS 50.0%
GGGGAGCTCACTGAATTCAA+AGG - chr6_1:42986737-42986756 None:intergenic 50.0%
GAAGGTAGAATGAAGGGAGG+GGG - chr6_1:42986756-42986775 None:intergenic 50.0%
ATTGACTACCTCCATCGCAC+AGG + chr6_1:42986826-42986845 Msa0885820:CDS 50.0%
ACAGGTAGAACTGCCCGTAT+GGG + chr6_1:42986844-42986863 Msa0885820:CDS 50.0%
CTTGGCAACCAAGATAGAGG+AGG + chr6_1:42987265-42987284 Msa0885820:CDS 50.0%
GTGTCCGAATGGATGTAACC+AGG + chr6_1:42987330-42987349 Msa0885820:CDS 50.0%
!! CTGCTCAGTGATTTGGTTCC+TGG - chr6_1:42987351-42987370 None:intergenic 50.0%
!! GCACCGATTCTGTGAATACC+AGG + chr6_1:42987429-42987448 Msa0885820:CDS 50.0%
TTTGTCCCTAGTACCTGACC+TGG - chr6_1:42987450-42987469 None:intergenic 50.0%
CTCAGATCTCCTGCGAGAAT+CGG - chr6_1:42987474-42987493 None:intergenic 50.0%
GCAGGAGATCTGAGAATACC+AGG + chr6_1:42987480-42987499 Msa0885820:CDS 50.0%
TTTGTCCCTAGTACCTGACC+TGG - chr6_1:42987450-42987469 None:intergenic 50.0%
GCAACAGATCTGAGAATGCC+AGG + chr6_1:42987531-42987550 Msa0885820:CDS 50.0%
AGATCTGAGAATGCCAGGTC+AGG + chr6_1:42987536-42987555 Msa0885820:CDS 50.0%
GCCAGGTCAGGTACAAAATC+GGG + chr6_1:42987548-42987567 Msa0885820:CDS 50.0%
! ACCCGATTTTGTACCTGACC+TGG - chr6_1:42987552-42987571 None:intergenic 50.0%
ACGTGTAGATTTGGAGGCAG+TGG - chr6_1:42987696-42987715 None:intergenic 50.0%
GAAACGGGATGGGAAGGTGA+TGG - chr6_1:42980370-42980389 None:intergenic 55.0%
GAGAGAGAAACGGGATGGGA+AGG - chr6_1:42980376-42980395 None:intergenic 55.0%
TGGTGAGGATTGTGCTGTGG+TGG - chr6_1:42980463-42980482 None:intergenic 55.0%
CGGTTCTCCTTGAGAGGTTG+AGG + chr6_1:42980517-42980536 Msa0885820:CDS 55.0%
GTGGAAGTGGAAGTGGGAGT+AGG + chr6_1:42980556-42980575 Msa0885820:CDS 55.0%
AAGGGTGGTGAGGAAGGTTG+AGG + chr6_1:42980587-42980606 Msa0885820:CDS 55.0%
AGGGTGGTGAGGAAGGTTGA+GGG + chr6_1:42980588-42980607 Msa0885820:CDS 55.0%
!! AGAGGGGGTGTTTGATGAGG+GGG + chr6_1:42980626-42980645 Msa0885820:CDS 55.0%
AGGGTTGGGATTAGGGGATG+AGG + chr6_1:42980674-42980693 Msa0885820:CDS 55.0%
!! GGTGTTCCGGCTGTTTTGGA+TGG + chr6_1:42980753-42980772 Msa0885820:CDS 55.0%
! TGTGGGTAGGATTGGCACGT+TGG + chr6_1:42981457-42981476 Msa0885820:intron 55.0%
! GTGGGTAGGATTGGCACGTT+GGG + chr6_1:42981458-42981477 Msa0885820:intron 55.0%
!! GGATTGGCACGTTGGGTTGA+AGG + chr6_1:42981465-42981484 Msa0885820:intron 55.0%
GCGTGTCTGCTGTCTGATGT+AGG + chr6_1:42981487-42981506 Msa0885820:intron 55.0%
GGGCATAACACAACAGCTCG+GGG - chr6_1:42982843-42982862 None:intergenic 55.0%
!! TAAGTGGTGGTGGCCGTCTA+AGG + chr6_1:42983016-42983035 Msa0885820:CDS 55.0%
GTCTGGAAACCTAGGCTGTC+AGG - chr6_1:42983324-42983343 None:intergenic 55.0%
! AGCATTGGAGTCGAGTGGCA+TGG - chr6_1:42984756-42984775 None:intergenic 55.0%
GCATGTGTGGGGAATACCTG+TGG + chr6_1:42986008-42986027 Msa0885820:intron 55.0%
GGGCACATTGTCGTCTATCG+TGG + chr6_1:42986277-42986296 Msa0885820:intron 55.0%
AGATTTGGCTGCTAGGGGTC+TGG + chr6_1:42986676-42986695 Msa0885820:CDS 55.0%
CAGTTCTACCTGTGCGATGG+AGG - chr6_1:42986837-42986856 None:intergenic 55.0%
CACAGGTAGAACTGCCCGTA+TGG + chr6_1:42986843-42986862 Msa0885820:CDS 55.0%
ACTGCCCGTATGGGTGCAAA+AGG + chr6_1:42986853-42986872 Msa0885820:CDS 55.0%
GGGACAAATCCGATTCTCGC+AGG + chr6_1:42987462-42987481 Msa0885820:CDS 55.0%
GTGTTGTCGGATTTAGGGGG+CGG + chr6_1:42987726-42987745 Msa0885820:CDS 55.0%
! ACGGGATGGGAAGGTGATGG+AGG - chr6_1:42980367-42980386 None:intergenic 60.0%
GGGTGGTGAGGAAGGTTGAG+GGG + chr6_1:42980589-42980608 Msa0885820:CDS 60.0%
GGTGGTGAGGAAGGTTGAGG+GGG + chr6_1:42980590-42980609 Msa0885820:CDS 60.0%
! GGGGTGTTTGATGAGGGGGA+CGG + chr6_1:42980630-42980649 Msa0885820:CDS 60.0%
GTGTTTGATGAGGGGGACGG+TGG + chr6_1:42980633-42980652 Msa0885820:CDS 60.0%
!! AGGGGGACGGTGGTGTTGTT+GGG + chr6_1:42980643-42980662 Msa0885820:CDS 60.0%
ACAACAGCTCGGGGACGCTT+CGG - chr6_1:42982834-42982853 None:intergenic 60.0%
ACGGCCACCACCACTTACCA+TGG - chr6_1:42983013-42983032 None:intergenic 60.0%
! TGGCCGTCTAAGGCCTCAAG+AGG + chr6_1:42983026-42983045 Msa0885820:CDS 60.0%
! TGGTAGTTGGTACCCCTGGC+AGG + chr6_1:42983073-42983092 Msa0885820:CDS 60.0%
!!! CGCGATGTTTTAACGGGGCC+AGG - chr6_1:42983293-42983312 None:intergenic 60.0%
GCTCGCGGCTTAGGACTCAT+TGG - chr6_1:42985573-42985592 None:intergenic 60.0%
TCCTAAGCCGCGAGCCTATC+CGG + chr6_1:42985578-42985597 Msa0885820:intron 60.0%
AATCCACCAGGGAGCCGGAT+AGG - chr6_1:42985595-42985614 None:intergenic 60.0%
GGGCAGTTCTACCTGTGCGA+TGG - chr6_1:42986840-42986859 None:intergenic 60.0%
!! GAGGGGGACGGTGGTGTTGT+TGG + chr6_1:42980642-42980661 Msa0885820:CDS 65.0%
!! GGGAGGTACCGGCAGCACAA+AGG + chr6_1:42985300-42985319 Msa0885820:CDS 65.0%
GGCTGCTAGGGGTCTGGACT+TGG + chr6_1:42986682-42986701 Msa0885820:CDS 65.0%
GTGCTGCCGGTACCTCCCCA+TGG - chr6_1:42985298-42985317 None:intergenic 70.0%
GCCGGATAGGCTCGCGGCTT+AGG - chr6_1:42985582-42985601 None:intergenic 70.0%
CAGGGAGCCGGATAGGCTCG+CGG - chr6_1:42985588-42985607 None:intergenic 70.0%
GAGCCTATCCGGCTCCCTGG+TGG + chr6_1:42985589-42985608 Msa0885820:intron 70.0%
CGCGAGCCTATCCGGCTCCC+TGG + chr6_1:42985586-42985605 Msa0885820:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 42980324 42987784 42980324 ID=Msa0885820;Name=Msa0885820
chr6_1 mRNA 42980324 42987784 42980324 ID=Msa0885820-mRNA-1;Parent=Msa0885820;Name=Msa0885820-mRNA-1;_AED=0.05;_eAED=0.06;_QI=0|0.87|0.66|1|1|1|9|0|639
chr6_1 exon 42980324 42980805 42980324 ID=Msa0885820-mRNA-1:exon:9373;Parent=Msa0885820-mRNA-1
chr6_1 exon 42982797 42982884 42982797 ID=Msa0885820-mRNA-1:exon:9374;Parent=Msa0885820-mRNA-1
chr6_1 exon 42982961 42983149 42982961 ID=Msa0885820-mRNA-1:exon:9375;Parent=Msa0885820-mRNA-1
chr6_1 exon 42983231 42983371 42983231 ID=Msa0885820-mRNA-1:exon:9376;Parent=Msa0885820-mRNA-1
chr6_1 exon 42983944 42984084 42983944 ID=Msa0885820-mRNA-1:exon:9377;Parent=Msa0885820-mRNA-1
chr6_1 exon 42985179 42985321 42985179 ID=Msa0885820-mRNA-1:exon:9378;Parent=Msa0885820-mRNA-1
chr6_1 exon 42986616 42986745 42986616 ID=Msa0885820-mRNA-1:exon:9379;Parent=Msa0885820-mRNA-1
chr6_1 exon 42986826 42986874 42986826 ID=Msa0885820-mRNA-1:exon:9380;Parent=Msa0885820-mRNA-1
chr6_1 exon 42987228 42987784 42987228 ID=Msa0885820-mRNA-1:exon:9381;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42980324 42980805 42980324 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42982797 42982884 42982797 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42982961 42983149 42982961 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42983231 42983371 42983231 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42983944 42984084 42983944 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42985179 42985321 42985179 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42986616 42986745 42986616 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42986826 42986874 42986826 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
chr6_1 CDS 42987228 42987784 42987228 ID=Msa0885820-mRNA-1:cds;Parent=Msa0885820-mRNA-1
Gene Sequence

>Msa0885820

ATGGCGGTTGCAACCAGAAAAACTCTCTTCACTCTCTCTTCCTCCATCACCTTCCCATCCCGTTTCTCTCTCTTCAAACTATCCCAAAACTCATCATCCCTCTTCCCAAAACGCTTCACACCATTCTCTTCTCTCACCACCACAGCACAATCCTCACCATCATTGCTATCTGACCCTGATCAAGAAAAACACTCGGTTCTCCTTGAGAGGTTGAGGATAAGACATTTGAAAGGTGGAAGTGGAAGTGGGAGTAGGAATGATGAAAGGGTGGTGAGGAAGGTTGAGGGGGTGAAGAAGAAGAAAGAGGGGGTGTTTGATGAGGGGGACGGTGGTGTTGTTGGGAGTTTTGAAGGGTTGGGATTAGGGGATGAGGTTATGGGGGCTGTTAGAGAAATGGGTATTGAAGTTCCTACTGAGATTCAGTGTATTGGTGTTCCGGCTGTTTTGGATGGGAAGAGTGTTGTGTTAGGGTCTCATACTGGACGGGATGAGCAATTGAATGGACTAGTGTTGAAGCCGAAGCGTCCCCGAGCTGTTGTGTTATGCCCTACGAGGGAGTTGTCTGAACAGGTTTTTCGAGTTGCAAAATCGATAAGTCATCATGCACGATTCAGGTGTACCATGGTAAGTGGTGGTGGCCGTCTAAGGCCTCAAGAGGAGTCACTTAGTAACCCCATTGATATGGTAGTTGGTACCCCTGGCAGGATTCTTCAACATATCGAGGAAGGAAATATGGTATACGGTGACATCCAATATGTGGTATTAGATGAGGCAGACACAATGTTTGATCGGGGCTTTGGTCCTGATATTAAAAAATTCCTGGCCCCGTTAAAACATCGCGCTTCAAAACCTGACAGCCTAGGTTTCCAGACTGTTTTGGTAACTGCAACCATGACAAAGGCTGTGCAAAATCTGGTTGATGAGGAGTTTCAAGGCATTGTACATCTGCGCACATCCTCATTACATAAGAAGATTTCTAATGCTCGTCATGATTTTATCAAACTTGCTGGTACCGAGAACAAACTGGATTCATTACTTCAGGTGTTAGAGCCAAGTCTTGCAAAGGGTAACAGGGTAATGGTTTTCTGCAACACATTGAATTCTAGTCGTGCCGTGGATCACTTTCTTGAAGAAAATCAGATATCTACTGTGAATTACCATGGGGAGGTACCGGCAGCACAAAGGGTTGAAAACCTCAACAAGTTCAAGAGTAACAACGATGATTGCCCCACATTGGTTTGCACAGATTTGGCTGCTAGGGGTCTGGACTTGGATGTTGATCATGTTATCATGTTTGACTTCCCTTTGAATTCAATTGACTACCTCCATCGCACAGGTAGAACTGCCCGTATGGGTGCAAAAGGGAAAATAACAAGTTTGGTTACTAAAAAGGACTATAGCTTGGCAACCAAGATAGAGGAGGCAATAAAAAAGAACGAGAATTTGGAGGCTATCACAAAAGAAAGTGTCCGAATGGATGTAACCAGGAACCAAATCACTGAGCAGAGAAGAAAGAACAAAAATGTGGTTAAACCTTCAAAAGTTAGGGACAAATCTGATTCTCGCACCGATTCTGTGAATACCAGGTCAGGTACTAGGGACAAATCCGATTCTCGCAGGAGATCTGAGAATACCAGGTCAGGTACTAGGGACAAAACTGATTCTCGCAACAGATCTGAGAATGCCAGGTCAGGTACAAAATCGGGTAAACAATCAACGCCATCAAAGTTTACGAAGAAAGGATTTACCGTTTCAAAATCTGTAAAATCTTCCAGTACAAGTAGCTTCAAGAAAACTTCTTCAGATAATAAGCGAACGGGTAAAAAAACCACTGCCTCCAAATCTACACGTTCTAAACTTAGTGTTGTCGGATTTAGGGGGCGGAATGCATCATCCTCAGATAAGAGACAAACATTTTAG
Protein sequence

>Msa0885820

MAVATRKTLFTLSSSITFPSRFSLFKLSQNSSSLFPKRFTPFSSLTTTAQSSPSLLSDPDQEKHSVLLERLRIRHLKGGSGSGSRNDERVVRKVEGVKKKKEGVFDEGDGGVVGSFEGLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGRDEQLNGLVLKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRLRPQEESLSNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRASKPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLAGTENKLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKFKSNNDDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVTKKDYSLATKIEEAIKKNENLEAITKESVRMDVTRNQITEQRRKNKNVVKPSKVRDKSDSRTDSVNTRSGTRDKSDSRRRSENTRSGTRDKTDSRNRSENARSGTKSGKQSTPSKFTKKGFTVSKSVKSSSTSSFKKTSSDNKRTGKKTTASKSTRSKLSVVGFRGRNASSSDKRQTF*