Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756470 | XP_003611626.2 | 96.846 | 539 | 8 | 1 | 1 | 539 | 1 | 530 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756470 | sp|Q9SZV0|RNC1_ARATH | 77.909 | 507 | 101 | 3 | 34 | 539 | 41 | 537 | 0.0 | 824 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756470 | G7K3W4 | 96.846 | 539 | 8 | 1 | 1 | 539 | 1 | 530 | 0.0 | 1070 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026110 | Msa0756470 | 0.844069 | 9.496912e-59 | -8.615850e-47 |
| Msa0073820 | Msa0756470 | 0.817218 | 3.696711e-52 | -8.615850e-47 |
| Msa0639370 | Msa0756470 | 0.879039 | 1.724422e-69 | -8.615850e-47 |
| Msa0667120 | Msa0756470 | 0.801909 | 7.208430e-49 | -8.615850e-47 |
| Msa0682460 | Msa0756470 | 0.825942 | 3.560131e-54 | -8.615850e-47 |
| Msa0685890 | Msa0756470 | 0.806982 | 6.312958e-50 | -8.615850e-47 |
| Msa0714030 | Msa0756470 | 0.893406 | 6.476458e-75 | -8.615850e-47 |
| Msa0714170 | Msa0756470 | 0.884056 | 2.656503e-71 | -8.615850e-47 |
| Msa0728280 | Msa0756470 | 0.825917 | 3.609513e-54 | -8.615850e-47 |
| Msa0728380 | Msa0756470 | 0.820485 | 6.692342e-53 | -8.615850e-47 |
| Msa0728540 | Msa0756470 | 0.825903 | 3.636962e-54 | -8.615850e-47 |
| Msa0756470 | Msa0764020 | 0.835740 | 1.406966e-56 | -8.615850e-47 |
| Msa0756470 | Msa0767520 | 0.829928 | 3.910884e-55 | -8.615850e-47 |
| Msa0756470 | Msa0776480 | 0.820507 | 6.612642e-53 | -8.615850e-47 |
| Msa0756470 | Msa0780140 | 0.822211 | 2.674553e-53 | -8.615850e-47 |
| Msa0756470 | Msa0783340 | 0.816494 | 5.371275e-52 | -8.615850e-47 |
| Msa0756470 | Msa0794460 | 0.801282 | 9.692964e-49 | -8.615850e-47 |
| Msa0756470 | Msa0802210 | 0.813522 | 2.453225e-51 | -8.615850e-47 |
| Msa0756470 | Msa0805940 | 0.822085 | 2.860013e-53 | -8.615850e-47 |
| Msa0756470 | Msa0806720 | 0.803079 | 4.136569e-49 | -8.615850e-47 |
| Msa0756470 | Msa0819440 | 0.807226 | 5.604950e-50 | -8.615850e-47 |
| Msa0756470 | Msa0824140 | 0.831986 | 1.223101e-55 | -8.615850e-47 |
| Msa0756470 | Msa0835520 | 0.931987 | 1.672298e-94 | -8.615850e-47 |
| Msa0756470 | Msa0843690 | 0.834258 | 3.325763e-56 | -8.615850e-47 |
| Msa0756470 | Msa0857120 | 0.817555 | 3.103282e-52 | -8.615850e-47 |
| Msa0756470 | Msa0863250 | 0.821249 | 4.463267e-53 | -8.615850e-47 |
| Msa0756470 | Msa0885820 | 0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0756470 | Msa0945960 | 0.800599 | 1.336238e-48 | -8.615850e-47 |
| Msa0756470 | Msa1033790 | 0.839286 | 1.735516e-57 | -8.615850e-47 |
| Msa0756470 | Msa1035510 | 0.802478 | 5.504983e-49 | -8.615850e-47 |
| Msa0756470 | Msa1075420 | 0.865444 | 5.877487e-65 | -8.615850e-47 |
| Msa0756470 | Msa1083140 | 0.806290 | 8.836371e-50 | -8.615850e-47 |
| Msa0756470 | Msa1127900 | 0.816658 | 4.935953e-52 | -8.615850e-47 |
| Msa0756470 | Msa1163050 | 0.857030 | 2.153592e-62 | -8.615850e-47 |
| Msa0756470 | Msa1165810 | 0.815383 | 9.511098e-52 | -8.615850e-47 |
| Msa0756470 | Msa1177240 | 0.839506 | 1.521247e-57 | -8.615850e-47 |
| Msa0756470 | Msa1222580 | 0.801953 | 7.059664e-49 | -8.615850e-47 |
| Msa0756470 | Msa1235140 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
| Msa0756470 | Msa1235150 | 0.828066 | 1.105033e-54 | -8.615850e-47 |
| Msa0756470 | Msa1259470 | 0.834720 | 2.545624e-56 | -8.615850e-47 |
| Msa0756470 | Msa1281270 | 0.838822 | 2.287942e-57 | -8.615850e-47 |
| Msa0756470 | Msa1317030 | 0.829185 | 5.929853e-55 | -8.615850e-47 |
| Msa0756470 | Msa1320380 | 0.825604 | 4.282285e-54 | -8.615850e-47 |
| Msa0756470 | Msa1388240 | 0.894170 | 3.170675e-75 | -8.615850e-47 |
| Msa0121800 | Msa0756470 | 0.867360 | 1.449166e-65 | -8.615850e-47 |
| Msa0140290 | Msa0756470 | 0.813379 | 2.637533e-51 | -8.615850e-47 |
| Msa0166570 | Msa0756470 | 0.861117 | 1.284933e-63 | -8.615850e-47 |
| Msa0171780 | Msa0756470 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0171920 | Msa0756470 | 0.858617 | 7.285224e-63 | -8.615850e-47 |
| Msa0171930 | Msa0756470 | 0.826776 | 2.253680e-54 | -8.615850e-47 |
| Msa0176710 | Msa0756470 | 0.801792 | 7.618936e-49 | -8.615850e-47 |
| Msa0380650 | Msa0756470 | 0.824832 | 6.517719e-54 | -8.615850e-47 |
| Msa0430290 | Msa0756470 | 0.827143 | 1.840628e-54 | -8.615850e-47 |
| Msa0481490 | Msa0756470 | 0.838708 | 2.449369e-57 | -8.615850e-47 |
| Msa0267340 | Msa0756470 | 0.849293 | 3.548988e-60 | -8.615850e-47 |
| Msa0323990 | Msa0756470 | 0.800210 | 1.603903e-48 | -8.615850e-47 |
| Msa0522660 | Msa0756470 | 0.803044 | 4.205760e-49 | -8.615850e-47 |
| Msa0546840 | Msa0756470 | 0.808725 | 2.689438e-50 | -8.615850e-47 |
| Msa0583170 | Msa0756470 | 0.833473 | 5.225499e-56 | -8.615850e-47 |
| Msa0583740 | Msa0756470 | 0.829303 | 5.551462e-55 | -8.615850e-47 |
| Msa0587900 | Msa0756470 | 0.804055 | 2.595163e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756470 | MtrunA17_Chr5g0401461 | 96.104 | 539 | 8 | 1 | 1 | 539 | 1 | 526 | 0.0 | 1062 |
| Msa0756470 | MtrunA17_Chr4g0053831 | 70.485 | 515 | 131 | 6 | 26 | 537 | 23 | 519 | 0.0 | 752 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756470 | AT4G37510.1 | 77.909 | 507 | 101 | 3 | 34 | 539 | 41 | 537 | 0.0 | 824 |
| Msa0756470 | AT2G48121.2 | 74.026 | 77 | 20 | 0 | 463 | 539 | 1 | 77 | 8.55e-34 | 123 |
| Msa0756470 | AT2G48121.1 | 73.214 | 56 | 15 | 0 | 484 | 539 | 20 | 75 | 1.05e-21 | 89.4 |
Find 142 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCGTAGGTCGGTATTT+TGG | 0.109591 | 5_2:-10731002 | Msa0756470:intron |
| GGACTCTCATATCTTGTTTA+TGG | 0.145537 | 5_2:-10728337 | Msa0756470:CDS |
| AATGAGAAGTTAGTTGGTTT+TGG | 0.179441 | 5_2:+10732620 | None:intergenic |
| GCAAGATATTGTTGCTTATA+AGG | 0.188751 | 5_2:-10730812 | Msa0756470:CDS |
| GGAGGGGTTGTGAAGATTAA+TGG | 0.211332 | 5_2:+10732730 | None:intergenic |
| TTCCTGGCTTCGGTAATTTC+TGG | 0.213137 | 5_2:+10730400 | None:intergenic |
| GGGTTTGTGTTGCTGGGTTT+TGG | 0.218590 | 5_2:+10732808 | None:intergenic |
| GATTATTTGAAAATTCAATT+TGG | 0.228145 | 5_2:-10727953 | Msa0756470:three_prime_UTR |
| CCGATGAGGGAGAGAGTTTA+TGG | 0.235102 | 5_2:-10732005 | Msa0756470:CDS |
| CATTGTAGATGAAGGGGTTT+GGG | 0.240337 | 5_2:+10732785 | None:intergenic |
| GATATTTCCTTATGATAATA+TGG | 0.242859 | 5_2:-10731925 | Msa0756470:CDS |
| TCTCATATTTAGACCTCTTT+AGG | 0.265901 | 5_2:+10728259 | None:intergenic |
| GGGGCAATCTATCTTTGTTT+TGG | 0.268972 | 5_2:-10730970 | Msa0756470:CDS |
| TTAACAATGCCGATAAATTA+TGG | 0.272123 | 5_2:-10732283 | Msa0756470:CDS |
| CGTTGAGGATTGTTATTTCT+AGG | 0.287707 | 5_2:+10732488 | None:intergenic |
| TTGATAGTGGAAAATAAAAT+TGG | 0.288695 | 5_2:+10732709 | None:intergenic |
| GACTCTCATATCTTGTTTAT+GGG | 0.294493 | 5_2:-10728336 | Msa0756470:CDS |
| AAGAGGGTAGTTTCGGGATT+TGG | 0.302484 | 5_2:+10732550 | None:intergenic |
| ATCGATTCAGAGGAAATATA+TGG | 0.308151 | 5_2:-10730489 | Msa0756470:CDS |
| GATGAGAATGAGAAGTTAGT+TGG | 0.309923 | 5_2:+10732614 | None:intergenic |
| ATGTTAGGTCTGGGCATTCT+AGG | 0.312555 | 5_2:-10732109 | Msa0756470:CDS |
| AAAAGAACACGGTAGACTTC+TGG | 0.315797 | 5_2:+10730943 | None:intergenic |
| ATTCTGTCTGTCATTTCTAA+TGG | 0.317291 | 5_2:+10730424 | None:intergenic |
| ATTATTTGAAAATTCAATTT+GGG | 0.324240 | 5_2:-10727952 | Msa0756470:three_prime_UTR |
| GAGGGGTTGTGAAGATTAAT+GGG | 0.325613 | 5_2:+10732731 | None:intergenic |
| GAGAGAGTTTATGGCTTGAT+TGG | 0.325627 | 5_2:-10731996 | Msa0756470:CDS |
| GGTAGACAAGAACTTAATAA+TGG | 0.332729 | 5_2:+10732317 | None:intergenic |
| ACATTGTAGATGAAGGGGTT+TGG | 0.336926 | 5_2:+10732784 | None:intergenic |
| TGTACTCTACTTGTTAGAAC+TGG | 0.344400 | 5_2:-10728087 | Msa0756470:three_prime_UTR |
| TGATTAACAGCTGTTGTGGC+TGG | 0.347745 | 5_2:+10728370 | None:intergenic |
| CTCATCTATCCATAATTTAT+CGG | 0.347797 | 5_2:+10732274 | None:intergenic |
| TGCTCAAATTTGTACTTTGA+TGG | 0.350401 | 5_2:+10729628 | None:intergenic |
| GAACGTGAAGAGGGTAGTTT+CGG | 0.375377 | 5_2:+10732543 | None:intergenic |
| AGTTTGAAAACAAGCTAAAC+TGG | 0.389097 | 5_2:-10730834 | Msa0756470:CDS |
| AGAGCTTGGACTTGGATTGC+AGG | 0.389569 | 5_2:-10730374 | Msa0756470:intron |
| ATAATTTATCGGCATTGTTA+AGG | 0.390095 | 5_2:+10732285 | None:intergenic |
| ATCTCTGTTCCGGTTATCTA+AGG | 0.390223 | 5_2:+10728061 | None:intergenic |
| AAGTCCAAGCTCTATGTTCC+TGG | 0.390461 | 5_2:+10730384 | None:intergenic |
| GGCTGGCAATCCTCATCATC+TGG | 0.399583 | 5_2:+10730901 | None:intergenic |
| AAGCTCTATGTTCCTGGCTT+CGG | 0.400967 | 5_2:+10730390 | None:intergenic |
| GAACAAAGACGAAGCATGTT+AGG | 0.401968 | 5_2:-10732124 | Msa0756470:CDS |
| ATCCAAGTGCTCTCATAACT+TGG | 0.404958 | 5_2:+10730449 | None:intergenic |
| AATAAAACGGTGAAGCTGTT+TGG | 0.409551 | 5_2:+10728447 | None:intergenic |
| ATGTATCCTCATCTCTGTTC+CGG | 0.413416 | 5_2:+10728051 | None:intergenic |
| AACGTGAAGAGGGTAGTTTC+GGG | 0.413908 | 5_2:+10732544 | None:intergenic |
| AGGGCAATATGTGCTGGAAT+TGG | 0.425669 | 5_2:-10732075 | Msa0756470:CDS |
| TGGCTGGGTTTCTCCGTCTC+CGG | 0.431775 | 5_2:+10728386 | None:intergenic |
| AAGACGAAGCATGTTAGGTC+TGG | 0.432221 | 5_2:-10732119 | Msa0756470:CDS |
| AGGAACATAGAGCTTGGACT+TGG | 0.433949 | 5_2:-10730382 | Msa0756470:CDS |
| ATTTAGATGCTCCTGGGTTG+TGG | 0.437257 | 5_2:-10728528 | Msa0756470:CDS |
| AACTGGGCTCCTTAGATAAC+CGG | 0.438291 | 5_2:-10728070 | Msa0756470:three_prime_UTR |
| ATGAAGCATTTAGATGCTCC+TGG | 0.439342 | 5_2:-10728535 | Msa0756470:CDS |
| TGAACCATCAGACACATTAG+AGG | 0.448502 | 5_2:-10732213 | Msa0756470:CDS |
| ACTCTCCATGGCTCAGATCA+TGG | 0.450343 | 5_2:-10728011 | Msa0756470:three_prime_UTR |
| GTAGACAAGAACTTAATAAT+GGG | 0.452131 | 5_2:+10732318 | None:intergenic |
| TTTCTTAGGGCAATATGTGC+TGG | 0.453869 | 5_2:-10732081 | Msa0756470:CDS |
| CCCCAAGTTATGAGAGCACT+TGG | 0.454535 | 5_2:-10730451 | Msa0756470:CDS |
| AAACCGCTTATGAGCGCAAC+CGG | 0.458052 | 5_2:-10728405 | Msa0756470:CDS |
| GTTGTTTGCGCTCCCTAGGC+TGG | 0.460379 | 5_2:+10730884 | None:intergenic |
| TCAAGTTGTTTGCGCTCCCT+AGG | 0.462470 | 5_2:+10730880 | None:intergenic |
| GTTTGAAGATTGAATTGTGC+TGG | 0.462819 | 5_2:+10732680 | None:intergenic |
| AAAGTATCAAACTGTTTGGC+AGG | 0.464232 | 5_2:+10732182 | None:intergenic |
| GGAAGGAGAATTTGCCTAAG+TGG | 0.464839 | 5_2:-10731974 | Msa0756470:CDS |
| AGAGAGTTTATGGCTTGATT+GGG | 0.465001 | 5_2:-10731995 | Msa0756470:CDS |
| AGATTAATGGGATTGATTTG+TGG | 0.469630 | 5_2:+10732743 | None:intergenic |
| CCTCTGAATCGATGCATGCC+AGG | 0.470072 | 5_2:+10730499 | None:intergenic |
| ACTGCTTGTTCTACTCTCCA+TGG | 0.470450 | 5_2:-10728023 | Msa0756470:three_prime_UTR |
| TTTGAGAGATTAGAATATGT+TGG | 0.474238 | 5_2:-10729592 | Msa0756470:CDS |
| GATTAACAGCTGTTGTGGCT+GGG | 0.475840 | 5_2:+10728371 | None:intergenic |
| AAAATTAGAACTTACTTGAC+AGG | 0.483319 | 5_2:+10731873 | None:intergenic |
| ATCTTATCCATATTATCATA+AGG | 0.484697 | 5_2:+10731918 | None:intergenic |
| TCCAAGTGCTCTCATAACTT+GGG | 0.485073 | 5_2:+10730450 | None:intergenic |
| TTGGATGGGGAAAGGAGAGA+AGG | 0.485624 | 5_2:+10732589 | None:intergenic |
| GATGGGGAAAGGAGAGAAGG+AGG | 0.489046 | 5_2:+10732592 | None:intergenic |
| GTTGAGGATTGTTATTTCTA+GGG | 0.500027 | 5_2:+10732489 | None:intergenic |
| ATTAAGATTTGGATGGGGAA+AGG | 0.504291 | 5_2:+10732581 | None:intergenic |
| CTCGAAGCGAAACAAGCGCT+TGG | 0.509306 | 5_2:-10732245 | Msa0756470:CDS |
| TATCATCATATATAATAAAA+CGG | 0.517957 | 5_2:+10728434 | None:intergenic |
| GTGCTGGGAAATGTTGATAG+TGG | 0.520234 | 5_2:+10732696 | None:intergenic |
| AAACTAAGTGGATCAAATCA+TGG | 0.520710 | 5_2:+10728160 | None:intergenic |
| TGAGCAGGTTCAGCCTAAAG+AGG | 0.525876 | 5_2:-10728272 | Msa0756470:CDS |
| GTCTTTGTTCTCTCACACGA+AGG | 0.525988 | 5_2:+10732137 | None:intergenic |
| GCTGTTAATCAAGCTATTCA+CGG | 0.527856 | 5_2:-10728358 | Msa0756470:CDS |
| TAGTGGAAAATAAAATTGGA+GGG | 0.528126 | 5_2:+10732713 | None:intergenic |
| AGACGAAGCATGTTAGGTCT+GGG | 0.530011 | 5_2:-10732118 | Msa0756470:CDS |
| CTCTGAATCGATGCATGCCA+GGG | 0.532007 | 5_2:+10730500 | None:intergenic |
| ACACATGCTCTAAACAGCCT+TGG | 0.533681 | 5_2:+10730526 | None:intergenic |
| CTTATGAGCGCAACCGGAGA+CGG | 0.533815 | 5_2:-10728399 | Msa0756470:CDS |
| TTCCAGAAATTACCGAAGCC+AGG | 0.536155 | 5_2:-10730402 | Msa0756470:CDS |
| AGTTTATGGCTTGATTGGGA+AGG | 0.536378 | 5_2:-10731991 | Msa0756470:CDS |
| TCGATTCAGAGGAAATATAT+GGG | 0.538733 | 5_2:-10730488 | Msa0756470:CDS |
| ATTGTAGATGAAGGGGTTTG+GGG | 0.542616 | 5_2:+10732786 | None:intergenic |
| ACTCTCTCCCTCATCGGACC+AGG | 0.543075 | 5_2:+10732011 | None:intergenic |
| ATGATGAGGATTGCCAGCCT+AGG | 0.543609 | 5_2:-10730897 | Msa0756470:CDS |
| TTTGAAGATTGAATTGTGCT+GGG | 0.545348 | 5_2:+10732681 | None:intergenic |
| TTGCTCCATGATCTGAGCCA+TGG | 0.546436 | 5_2:+10728006 | None:intergenic |
| AAGTGGATCAAATCATGGTA+AGG | 0.547895 | 5_2:+10728165 | None:intergenic |
| AGCTTGATTAACAGCTGTTG+TGG | 0.551231 | 5_2:+10728366 | None:intergenic |
| TGATGAGGATTGCCAGCCTA+GGG | 0.552339 | 5_2:-10730896 | Msa0756470:CDS |
| TTTAGAATGTAACGTCTTGG+TGG | 0.553258 | 5_2:+10732410 | None:intergenic |
| ATAGTGGAAAATAAAATTGG+AGG | 0.555100 | 5_2:+10732712 | None:intergenic |
| TGAGTAAACAGAGCATCTGC+AGG | 0.557301 | 5_2:+10730550 | None:intergenic |
| ATCGGACCAGGCAATTCCCT+CGG | 0.558254 | 5_2:+10732023 | None:intergenic |
| CCATAAACTCTCTCCCTCAT+CGG | 0.572678 | 5_2:+10732005 | None:intergenic |
| TCTCCGGTTGCGCTCATAAG+CGG | 0.572925 | 5_2:+10728402 | None:intergenic |
| TTCTCTTGCAGCCACAACCC+AGG | 0.573873 | 5_2:+10728517 | None:intergenic |
| ATATGTGCTGGAATTGGCAT+TGG | 0.575967 | 5_2:-10732069 | Msa0756470:CDS |
| GAAGCCAGGAACATAGAGCT+TGG | 0.576371 | 5_2:-10730388 | Msa0756470:CDS |
| ACATGGCAATAGAGTACTCT+CGG | 0.579660 | 5_2:-10728228 | Msa0756470:three_prime_UTR |
| CCTGGCATGCATCGATTCAG+AGG | 0.580371 | 5_2:-10730499 | Msa0756470:CDS |
| ATGCTCTGTTTACTCATCCA+AGG | 0.580822 | 5_2:-10730543 | Msa0756470:CDS |
| GTACTCTACTTGTTAGAACT+GGG | 0.583609 | 5_2:-10728086 | Msa0756470:three_prime_UTR |
| GGAATTGCCTGGTCCGATGA+GGG | 0.585185 | 5_2:-10732018 | Msa0756470:CDS |
| CAATCTTCAAACAACTACAA+TGG | 0.585823 | 5_2:-10732669 | Msa0756470:exon |
| AAATCATGGTAAGGAAAACC+AGG | 0.587516 | 5_2:+10728174 | None:intergenic |
| TGTAGATGAAGGGGTTTGGG+GGG | 0.589369 | 5_2:+10732788 | None:intergenic |
| CGGAATGGATCCAGATGATG+AGG | 0.590285 | 5_2:-10730911 | Msa0756470:CDS |
| GCGCAAACAACTTGAAGATG+TGG | 0.590741 | 5_2:-10730872 | Msa0756470:CDS |
| TGAAGCATTTAGATGCTCCT+GGG | 0.592431 | 5_2:-10728534 | Msa0756470:CDS |
| TCATCCTCTAATGTGTCTGA+TGG | 0.595112 | 5_2:+10732209 | None:intergenic |
| TTGTAGATGAAGGGGTTTGG+GGG | 0.604922 | 5_2:+10732787 | None:intergenic |
| AGGTATCCGAGGGAATTGCC+TGG | 0.610907 | 5_2:-10732029 | Msa0756470:CDS |
| CCAAGTGCTCTCATAACTTG+GGG | 0.611381 | 5_2:+10730451 | None:intergenic |
| CTCACACGAAGGATGCTGAA+AGG | 0.613808 | 5_2:+10732148 | None:intergenic |
| GCAACTGCGAGAACGTGAAG+AGG | 0.627154 | 5_2:+10732533 | None:intergenic |
| GGGAATTGCCTGGTCCGATG+AGG | 0.628852 | 5_2:-10732019 | Msa0756470:CDS |
| CAACTGCGAGAACGTGAAGA+GGG | 0.631595 | 5_2:+10732534 | None:intergenic |
| ATAATATGGATAAGATTGTG+AGG | 0.636146 | 5_2:-10731911 | Msa0756470:CDS |
| AGTGGAAAATAAAATTGGAG+GGG | 0.636810 | 5_2:+10732714 | None:intergenic |
| GCATTGTTAAGGCGCGACGA+AGG | 0.641980 | 5_2:+10732296 | None:intergenic |
| GTAAACAGAGCATCTGCAGG+AGG | 0.645297 | 5_2:+10730553 | None:intergenic |
| CTAGCAGCTTTAATCCACTT+AGG | 0.646479 | 5_2:+10731960 | None:intergenic |
| AATCTCTCAAAGCAAAATCG+AGG | 0.653019 | 5_2:+10729604 | None:intergenic |
| TCTGAATCGATGCATGCCAG+GGG | 0.656480 | 5_2:+10730501 | None:intergenic |
| AGATAACCGGAACAGAGATG+AGG | 0.667397 | 5_2:-10728057 | Msa0756470:three_prime_UTR |
| AATCATGGTAAGGAAAACCA+GGG | 0.685301 | 5_2:+10728175 | None:intergenic |
| AGTTCTTTAAGAAGTCGTTG+AGG | 0.689037 | 5_2:+10732473 | None:intergenic |
| ATTGTGAGGAGAGATAGAGA+AGG | 0.699451 | 5_2:-10731897 | Msa0756470:CDS |
| ATCATGGTAAGGAAAACCAG+GGG | 0.708787 | 5_2:+10728176 | None:intergenic |
| CTGAATCGATGCATGCCAGG+GGG | 0.708978 | 5_2:+10730502 | None:intergenic |
| TCATGGTAAGGAAAACCAGG+GGG | 0.756619 | 5_2:+10728177 | None:intergenic |
| AATATGAGACAAGAATGACA+TGG | 0.759010 | 5_2:-10728245 | Msa0756470:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTTGATATTATGT+TGG | - | chr5_2:10728905-10728924 | Msa0756470:intron | 10.0% |
| !! | AATTATGTTAATATTTGTAT+TGG | - | chr5_2:10729289-10729308 | Msa0756470:intron | 10.0% |
| !!! | TGTATTAATAGTTTAAAATT+AGG | - | chr5_2:10730871-10730890 | Msa0756470:CDS | 10.0% |
| !! | TATCATCATATATAATAAAA+CGG | + | chr5_2:10732305-10732324 | None:intergenic | 10.0% |
| !! | ATTATTTGAAAATTCAATTT+GGG | - | chr5_2:10732784-10732803 | Msa0756470:five_prime_UTR | 10.0% |
| !!! | TTTTTATTTTCTTAAGGATT+TGG | - | chr5_2:10732158-10732177 | Msa0756470:CDS | 15.0% |
| !! | GATTATTTGAAAATTCAATT+TGG | - | chr5_2:10732783-10732802 | Msa0756470:five_prime_UTR | 15.0% |
| !!! | TTGATAGTGGAAAATAAAAT+TGG | + | chr5_2:10728030-10728049 | None:intergenic | 20.0% |
| !!! | TTTTTGATTAAGATTTGGAT+GGG | + | chr5_2:10728164-10728183 | None:intergenic | 20.0% |
| !!! | GTTTGATACTTTTTTGTATT+TGG | - | chr5_2:10728565-10728584 | Msa0756470:CDS | 20.0% |
| !! | GATATTTCCTTATGATAATA+TGG | - | chr5_2:10728811-10728830 | Msa0756470:intron | 20.0% |
| !! | ATCTTATCCATATTATCATA+AGG | + | chr5_2:10728821-10728840 | None:intergenic | 20.0% |
| !! | TTCACATAATGAATGATATT+TGG | - | chr5_2:10729313-10729332 | Msa0756470:intron | 20.0% |
| !! | GTTATAGTGATATAAACTAT+AGG | - | chr5_2:10729410-10729429 | Msa0756470:intron | 20.0% |
| !! | AAAGAATACAACAGATATAA+AGG | + | chr5_2:10729464-10729483 | None:intergenic | 20.0% |
| !!! | CTGTTGTATTCTTTTTTTTT+TGG | - | chr5_2:10729470-10729489 | Msa0756470:intron | 20.0% |
| !!! | CAAGTTTACTTCTAAAAAAA+GGG | + | chr5_2:10730969-10730988 | None:intergenic | 20.0% |
| !!! | ACAAGTTTACTTCTAAAAAA+AGG | + | chr5_2:10730970-10730989 | None:intergenic | 20.0% |
| !!! | ACAACGTTTTTATTTTCTTA+AGG | - | chr5_2:10732152-10732171 | Msa0756470:CDS | 20.0% |
| !! | TAAATAACCTAAAAACTAAG+TGG | + | chr5_2:10732591-10732610 | None:intergenic | 20.0% |
| !!! | TGATTTGTGGATTTTTGTAT+TGG | + | chr5_2:10727983-10728002 | None:intergenic | 25.0% |
| ! | TAGTGGAAAATAAAATTGGA+GGG | + | chr5_2:10728026-10728045 | None:intergenic | 25.0% |
| !! | ATAGTGGAAAATAAAATTGG+AGG | + | chr5_2:10728027-10728046 | None:intergenic | 25.0% |
| !!! | TTTTGATTAAGATTTGGATG+GGG | + | chr5_2:10728163-10728182 | None:intergenic | 25.0% |
| !!! | GTTTTTGATTAAGATTTGGA+TGG | + | chr5_2:10728165-10728184 | None:intergenic | 25.0% |
| !!! | TGGTGTTTTTGATTAAGATT+TGG | + | chr5_2:10728169-10728188 | None:intergenic | 25.0% |
| ! | GTAGACAAGAACTTAATAAT+GGG | + | chr5_2:10728421-10728440 | None:intergenic | 25.0% |
| ! | ATAATTTATCGGCATTGTTA+AGG | + | chr5_2:10728454-10728473 | None:intergenic | 25.0% |
| ! | TTAACAATGCCGATAAATTA+TGG | - | chr5_2:10728453-10728472 | Msa0756470:CDS | 25.0% |
| ! | CTCATCTATCCATAATTTAT+CGG | + | chr5_2:10728465-10728484 | None:intergenic | 25.0% |
| !!! | CAAAAAAGTATCAAACTGTT+TGG | + | chr5_2:10728561-10728580 | None:intergenic | 25.0% |
| !!! | ATTCTAGGTTGTTTTTCTTA+GGG | - | chr5_2:10728642-10728661 | Msa0756470:intron | 25.0% |
| ! | ATAATATGGATAAGATTGTG+AGG | - | chr5_2:10728825-10728844 | Msa0756470:intron | 25.0% |
| ! | AAAATTAGAACTTACTTGAC+AGG | + | chr5_2:10728866-10728885 | None:intergenic | 25.0% |
| ! | TCAATCAAACTTTACTATGT+AGG | - | chr5_2:10729008-10729027 | Msa0756470:intron | 25.0% |
| ! | TGAGAAGAATATAACTAACT+CGG | + | chr5_2:10729071-10729090 | None:intergenic | 25.0% |
| ! | ACATTGCGAAATTTATTTGA+TGG | - | chr5_2:10729090-10729109 | Msa0756470:intron | 25.0% |
| ! | CATTGCGAAATTTATTTGAT+GGG | - | chr5_2:10729091-10729110 | Msa0756470:intron | 25.0% |
| ! | ATTGCGAAATTTATTTGATG+GGG | - | chr5_2:10729092-10729111 | Msa0756470:intron | 25.0% |
| !!! | TGAATTGATTTGTTAGGATA+AGG | - | chr5_2:10729168-10729187 | Msa0756470:intron | 25.0% |
| ! | GTTTATATCACTATAACTCA+TGG | + | chr5_2:10729407-10729426 | None:intergenic | 25.0% |
| ! | CAAATTGATTAACAGCAAAT+GGG | + | chr5_2:10729626-10729645 | None:intergenic | 25.0% |
| ! | ACAAATTGATTAACAGCAAA+TGG | + | chr5_2:10729627-10729646 | None:intergenic | 25.0% |
| ! | AATATAGAACATTCGATTGT+AGG | + | chr5_2:10730129-10730148 | None:intergenic | 25.0% |
| ! | AAATGTGAAAGTAGAATGAA+AGG | + | chr5_2:10730402-10730421 | None:intergenic | 25.0% |
| ! | TTCTATTTATTATCCTTCTC+AGG | - | chr5_2:10730526-10730545 | Msa0756470:CDS | 25.0% |
| !!! | AAATTTGAAAGTATCACTGT+AGG | + | chr5_2:10730647-10730666 | None:intergenic | 25.0% |
| !! | CAAATTTTTGTGTTGAATTC+AGG | - | chr5_2:10730660-10730679 | Msa0756470:intron | 25.0% |
| ! | ATTTACATAAACAGCTAAAC+CGG | + | chr5_2:10730725-10730744 | None:intergenic | 25.0% |
| !!! | TATTCACTTTTCTATTGAAG+TGG | - | chr5_2:10731002-10731021 | Msa0756470:intron | 25.0% |
| !!! | ATTCACTTTTCTATTGAAGT+GGG | - | chr5_2:10731003-10731022 | Msa0756470:intron | 25.0% |
| ! | TTTGAGAGATTAGAATATGT+TGG | - | chr5_2:10731144-10731163 | Msa0756470:intron | 25.0% |
| ! | GAAGACTCTAATTTCATTAA+TGG | - | chr5_2:10731212-10731231 | Msa0756470:intron | 25.0% |
| ! | TTATCGCATTTCTGATAATA+GGG | + | chr5_2:10731262-10731281 | None:intergenic | 25.0% |
| ! | TTTATCGCATTTCTGATAAT+AGG | + | chr5_2:10731263-10731282 | None:intergenic | 25.0% |
| ! | ATCTTGAATAGAAAAAAGTG+AGG | - | chr5_2:10731306-10731325 | Msa0756470:intron | 25.0% |
| !! | CATTATTCTGAAAAATAGCT+TGG | - | chr5_2:10731371-10731390 | Msa0756470:intron | 25.0% |
| !!! | ATTTTTCACATCTAAGATCA+GGG | + | chr5_2:10731490-10731509 | None:intergenic | 25.0% |
| !!! | AATTTTTCACATCTAAGATC+AGG | + | chr5_2:10731491-10731510 | None:intergenic | 25.0% |
| !!! | CATGGAAGCTTTTTTTTTTT+TGG | + | chr5_2:10731530-10731549 | None:intergenic | 25.0% |
| ! | AATTGTTTGAAAGTTACTGA+AGG | - | chr5_2:10731697-10731716 | Msa0756470:intron | 25.0% |
| !!! | TTCTGAAATATAAACAAGAG+AGG | - | chr5_2:10731786-10731805 | Msa0756470:intron | 25.0% |
| ! | AAAAAAGATGATGCTAACAA+GGG | - | chr5_2:10731888-10731907 | Msa0756470:CDS | 25.0% |
| !! | ATTCTTCTGAACAAATTTTG+TGG | - | chr5_2:10732252-10732271 | Msa0756470:CDS | 25.0% |
| !!! | ATTTGATCCACTTAGTTTTT+AGG | - | chr5_2:10732581-10732600 | Msa0756470:CDS | 25.0% |
| ! | TTTTGACATTGTAGATGAAG+GGG | + | chr5_2:10727960-10727979 | None:intergenic | 30.0% |
| !! | GTTTTGACATTGTAGATGAA+GGG | + | chr5_2:10727961-10727980 | None:intergenic | 30.0% |
| !! | AGATTAATGGGATTGATTTG+TGG | + | chr5_2:10727996-10728015 | None:intergenic | 30.0% |
| AGTGGAAAATAAAATTGGAG+GGG | + | chr5_2:10728025-10728044 | None:intergenic | 30.0% | |
| TTTGAAGATTGAATTGTGCT+GGG | + | chr5_2:10728058-10728077 | None:intergenic | 30.0% | |
| CAATCTTCAAACAACTACAA+TGG | - | chr5_2:10728067-10728086 | Msa0756470:three_prime_UTR | 30.0% | |
| !!! | ATGAGAAGTTAGTTGGTTTT+GGG | + | chr5_2:10728118-10728137 | None:intergenic | 30.0% |
| !! | AATGAGAAGTTAGTTGGTTT+TGG | + | chr5_2:10728119-10728138 | None:intergenic | 30.0% |
| !! | GTTGAGGATTGTTATTTCTA+GGG | + | chr5_2:10728250-10728269 | None:intergenic | 30.0% |
| !!! | TTGGTGGTGATTTTGATTTT+GGG | + | chr5_2:10728313-10728332 | None:intergenic | 30.0% |
| !! | AATGATTTTAGTGAAAGCTG+TGG | + | chr5_2:10728398-10728417 | None:intergenic | 30.0% |
| GGTAGACAAGAACTTAATAA+TGG | + | chr5_2:10728422-10728441 | None:intergenic | 30.0% | |
| !!! | CATTCTAGGTTGTTTTTCTT+AGG | - | chr5_2:10728641-10728660 | Msa0756470:intron | 30.0% |
| TTAGTTAGATATCATGTGAC+CGG | - | chr5_2:10729115-10729134 | Msa0756470:intron | 30.0% | |
| CCTAACAAATCAATTCAGTT+TGG | + | chr5_2:10729165-10729184 | None:intergenic | 30.0% | |
| !! | CCAAACTGAATTGATTTGTT+AGG | - | chr5_2:10729162-10729181 | Msa0756470:intron | 30.0% |
| ! | GATTTTCTGTCTATGTCTAT+TGG | - | chr5_2:10729259-10729278 | Msa0756470:intron | 30.0% |
| ! | CATAAACTTAAAAGTGCACA+AGG | + | chr5_2:10729348-10729367 | None:intergenic | 30.0% |
| ! | TTTGTTGCTATCTCATTTTC+AGG | - | chr5_2:10729502-10729521 | Msa0756470:intron | 30.0% |
| ACCATCTTATATGATTGAGT+TGG | - | chr5_2:10729653-10729672 | Msa0756470:intron | 30.0% | |
| ACCAACTCAATCATATAAGA+TGG | + | chr5_2:10729657-10729676 | None:intergenic | 30.0% | |
| !! | CACATTTGTTATTCTATCGT+AGG | - | chr5_2:10729722-10729741 | Msa0756470:intron | 30.0% |
| !! | TTTGTTATTCTATCGTAGGT+CGG | - | chr5_2:10729726-10729745 | Msa0756470:intron | 30.0% |
| AGTTTGAAAACAAGCTAAAC+TGG | - | chr5_2:10729902-10729921 | Msa0756470:intron | 30.0% | |
| ! | GCAAGATATTGTTGCTTATA+AGG | - | chr5_2:10729924-10729943 | Msa0756470:intron | 30.0% |
| CAATCGAATGTTCTATATTG+AGG | - | chr5_2:10730130-10730149 | Msa0756470:intron | 30.0% | |
| ! | ATCGATTCAGAGGAAATATA+TGG | - | chr5_2:10730247-10730266 | Msa0756470:intron | 30.0% |
| TCGATTCAGAGGAAATATAT+GGG | - | chr5_2:10730248-10730267 | Msa0756470:intron | 30.0% | |
| ! | ATTCTGTCTGTCATTTCTAA+TGG | + | chr5_2:10730315-10730334 | None:intergenic | 30.0% |
| ATATGTTTAGTGAGAGTGAT+TGG | - | chr5_2:10730570-10730589 | Msa0756470:intron | 30.0% | |
| !!! | TTGACAATTCTGTTTTTACC+CGG | - | chr5_2:10730703-10730722 | Msa0756470:intron | 30.0% |
| TTTACATAAACAGCTAAACC+GGG | + | chr5_2:10730724-10730743 | None:intergenic | 30.0% | |
| GGTTTAGCTGTTTATGTAAA+TGG | - | chr5_2:10730724-10730743 | Msa0756470:intron | 30.0% | |
| ! | GTTTATGTAATTTTCTCACC+TGG | - | chr5_2:10730746-10730765 | Msa0756470:intron | 30.0% |
| TGCTCAAATTTGTACTTTGA+TGG | + | chr5_2:10731111-10731130 | None:intergenic | 30.0% | |
| ATATGTTGGAAAAACGATAC+AGG | - | chr5_2:10731158-10731177 | Msa0756470:intron | 30.0% | |
| ATTTCTGATAATAGGGAAAG+GGG | + | chr5_2:10731255-10731274 | None:intergenic | 30.0% | |
| CATTTCTGATAATAGGGAAA+GGG | + | chr5_2:10731256-10731275 | None:intergenic | 30.0% | |
| GGATAAAAATAGATTGCAAC+AGG | - | chr5_2:10731392-10731411 | Msa0756470:intron | 30.0% | |
| ! | TCTTTCTCTTAGGTTTTTCA+TGG | + | chr5_2:10731548-10731567 | None:intergenic | 30.0% |
| TGAAAAACCTAAGAGAAAGA+TGG | - | chr5_2:10731548-10731567 | Msa0756470:intron | 30.0% | |
| GAAAAACCTAAGAGAAAGAT+GGG | - | chr5_2:10731549-10731568 | Msa0756470:intron | 30.0% | |
| TGAAATATAAACAAGAGAGG+TGG | - | chr5_2:10731789-10731808 | Msa0756470:intron | 30.0% | |
| GAAATATAAACAAGAGAGGT+GGG | - | chr5_2:10731790-10731809 | Msa0756470:intron | 30.0% | |
| CAAAATCACAGACACATATT+AGG | + | chr5_2:10731858-10731877 | None:intergenic | 30.0% | |
| CAAAAAAGATGATGCTAACA+AGG | - | chr5_2:10731887-10731906 | Msa0756470:intron | 30.0% | |
| AAAAAGATGATGCTAACAAG+GGG | - | chr5_2:10731889-10731908 | Msa0756470:CDS | 30.0% | |
| ! | TACAAATTTTGTGCTTCCAA+CGG | + | chr5_2:10732005-10732024 | None:intergenic | 30.0% |
| !!! | TTTTCTTAAGGATTTGGTGA+TGG | - | chr5_2:10732164-10732183 | Msa0756470:CDS | 30.0% |
| ! | AATTTTGTGGAAGATACTTG+AGG | - | chr5_2:10732265-10732284 | Msa0756470:CDS | 30.0% |
| ! | ATTTTGTGGAAGATACTTGA+GGG | - | chr5_2:10732266-10732285 | Msa0756470:CDS | 30.0% |
| ! | GACTCTCATATCTTGTTTAT+GGG | - | chr5_2:10732400-10732419 | Msa0756470:CDS | 30.0% |
| TCTCATATTTAGACCTCTTT+AGG | + | chr5_2:10732480-10732499 | None:intergenic | 30.0% | |
| AATATGAGACAAGAATGACA+TGG | - | chr5_2:10732491-10732510 | Msa0756470:CDS | 30.0% | |
| AAACTAAGTGGATCAAATCA+TGG | + | chr5_2:10732579-10732598 | None:intergenic | 30.0% | |
| !! | GGTTTTGACATTGTAGATGA+AGG | + | chr5_2:10727962-10727981 | None:intergenic | 35.0% |
| GTTTGAAGATTGAATTGTGC+TGG | + | chr5_2:10728059-10728078 | None:intergenic | 35.0% | |
| !!! | TGAGAAGTTAGTTGGTTTTG+GGG | + | chr5_2:10728117-10728136 | None:intergenic | 35.0% |
| GATGAGAATGAGAAGTTAGT+TGG | + | chr5_2:10728125-10728144 | None:intergenic | 35.0% | |
| ATTAAGATTTGGATGGGGAA+AGG | + | chr5_2:10728158-10728177 | None:intergenic | 35.0% | |
| !! | TTCTAGGGAAGTCTTTTGTT+GGG | + | chr5_2:10728235-10728254 | None:intergenic | 35.0% |
| !! | TTTCTAGGGAAGTCTTTTGT+TGG | + | chr5_2:10728236-10728255 | None:intergenic | 35.0% |
| !! | CGTTGAGGATTGTTATTTCT+AGG | + | chr5_2:10728251-10728270 | None:intergenic | 35.0% |
| ! | AGTTCTTTAAGAAGTCGTTG+AGG | + | chr5_2:10728266-10728285 | None:intergenic | 35.0% |
| !!! | CTTGGTGGTGATTTTGATTT+TGG | + | chr5_2:10728314-10728333 | None:intergenic | 35.0% |
| ! | TTTAGAATGTAACGTCTTGG+TGG | + | chr5_2:10728329-10728348 | None:intergenic | 35.0% |
| !!! | GGTTTTAGAATGTAACGTCT+TGG | + | chr5_2:10728332-10728351 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGTCATCTAGTGG+GGG | + | chr5_2:10728353-10728372 | None:intergenic | 35.0% |
| !!! | GAGTTTTTTGTCATCTAGTG+GGG | + | chr5_2:10728354-10728373 | None:intergenic | 35.0% |
| !!! | CGAGTTTTTTGTCATCTAGT+GGG | + | chr5_2:10728355-10728374 | None:intergenic | 35.0% |
| ! | AAAGTATCAAACTGTTTGGC+AGG | + | chr5_2:10728557-10728576 | None:intergenic | 35.0% |
| AGAGAGTTTATGGCTTGATT+GGG | - | chr5_2:10728741-10728760 | Msa0756470:intron | 35.0% | |
| AGTAAAGTTTGATTGAGCGA+CGG | + | chr5_2:10729004-10729023 | None:intergenic | 35.0% | |
| GACATCAAATGATCATAGAC+CGG | + | chr5_2:10729137-10729156 | None:intergenic | 35.0% | |
| TCTCATGAATTAAGCTTGCA+TGG | - | chr5_2:10729210-10729229 | Msa0756470:intron | 35.0% | |
| TTACTGTCTAAACAGGACAT+AGG | - | chr5_2:10729568-10729587 | Msa0756470:intron | 35.0% | |
| CGAACACTTCAAAAAGAACA+CGG | + | chr5_2:10729807-10729826 | None:intergenic | 35.0% | |
| !!! | CGTGTTCTTTTTGAAGTGTT+CGG | - | chr5_2:10729805-10729824 | Msa0756470:intron | 35.0% |
| !!! | TCTTTTTGAAGTGTTCGGAA+TGG | - | chr5_2:10729810-10729829 | Msa0756470:intron | 35.0% |
| GTGCAGTTGCTCATAATAAA+TGG | + | chr5_2:10730012-10730031 | None:intergenic | 35.0% | |
| ! | ACTTTCACATTTTCCCTTTC+TGG | - | chr5_2:10730410-10730429 | Msa0756470:CDS | 35.0% |
| ! | GTGCTTTAAATAGCCAGAAA+GGG | + | chr5_2:10730426-10730445 | None:intergenic | 35.0% |
| ! | TGTGCTTTAAATAGCCAGAA+AGG | + | chr5_2:10730427-10730446 | None:intergenic | 35.0% |
| ! | GGCTATTTAAAGCACAAATC+TGG | - | chr5_2:10730431-10730450 | Msa0756470:CDS | 35.0% |
| TGGTTTAGCTGTTTAGCAAT+CGG | - | chr5_2:10730766-10730785 | Msa0756470:intron | 35.0% | |
| AAACTTGTCTAGTGCATATG+CGG | - | chr5_2:10730922-10730941 | Msa0756470:CDS | 35.0% | |
| AATCTCTCAAAGCAAAATCG+AGG | + | chr5_2:10731135-10731154 | None:intergenic | 35.0% | |
| TTCGTTTGTGGAAATTCTTC+AGG | - | chr5_2:10731190-10731209 | Msa0756470:intron | 35.0% | |
| GCATTTCTGATAATAGGGAA+AGG | + | chr5_2:10731257-10731276 | None:intergenic | 35.0% | |
| GAATAGAAAAAAGTGAGGTG+AGG | - | chr5_2:10731311-10731330 | Msa0756470:intron | 35.0% | |
| CGGAATTTCCACTTAGATAT+GGG | - | chr5_2:10731584-10731603 | Msa0756470:intron | 35.0% | |
| ! | TTTTCATGCCCATATCTAAG+TGG | + | chr5_2:10731595-10731614 | None:intergenic | 35.0% |
| GAATAGCTGCAGTACAATTA+CGG | - | chr5_2:10731639-10731658 | Msa0756470:intron | 35.0% | |
| AATAGCTGCAGTACAATTAC+GGG | - | chr5_2:10731640-10731659 | Msa0756470:intron | 35.0% | |
| TTTGAAAGTTACTGAAGGTG+AGG | - | chr5_2:10731702-10731721 | Msa0756470:intron | 35.0% | |
| AATAAAACGGTGAAGCTGTT+TGG | + | chr5_2:10732292-10732311 | None:intergenic | 35.0% | |
| GCTGTTAATCAAGCTATTCA+CGG | - | chr5_2:10732378-10732397 | Msa0756470:CDS | 35.0% | |
| ! | GGACTCTCATATCTTGTTTA+TGG | - | chr5_2:10732399-10732418 | Msa0756470:CDS | 35.0% |
| !!! | TGAGTTTTTTGACTTTGAGC+AGG | - | chr5_2:10732449-10732468 | Msa0756470:CDS | 35.0% |
| AATCATGGTAAGGAAAACCA+GGG | + | chr5_2:10732564-10732583 | None:intergenic | 35.0% | |
| AAATCATGGTAAGGAAAACC+AGG | + | chr5_2:10732565-10732584 | None:intergenic | 35.0% | |
| AAGTGGATCAAATCATGGTA+AGG | + | chr5_2:10732574-10732593 | None:intergenic | 35.0% | |
| ! | TGTACTCTACTTGTTAGAAC+TGG | - | chr5_2:10732649-10732668 | Msa0756470:CDS | 35.0% |
| ! | GTACTCTACTTGTTAGAACT+GGG | - | chr5_2:10732650-10732669 | Msa0756470:CDS | 35.0% |
| ATTGTAGATGAAGGGGTTTG+GGG | + | chr5_2:10727953-10727972 | None:intergenic | 40.0% | |
| CATTGTAGATGAAGGGGTTT+GGG | + | chr5_2:10727954-10727973 | None:intergenic | 40.0% | |
| ACATTGTAGATGAAGGGGTT+TGG | + | chr5_2:10727955-10727974 | None:intergenic | 40.0% | |
| GAGGGGTTGTGAAGATTAAT+GGG | + | chr5_2:10728008-10728027 | None:intergenic | 40.0% | |
| !! | TTTTGGGGAGAGTGAAAAAG+AGG | + | chr5_2:10728102-10728121 | None:intergenic | 40.0% |
| !!! | GCGAGTTTTTTGTCATCTAG+TGG | + | chr5_2:10728356-10728375 | None:intergenic | 40.0% |
| TGAACCATCAGACACATTAG+AGG | - | chr5_2:10728523-10728542 | Msa0756470:CDS | 40.0% | |
| TCATCCTCTAATGTGTCTGA+TGG | + | chr5_2:10728530-10728549 | None:intergenic | 40.0% | |
| GAACAAAGACGAAGCATGTT+AGG | - | chr5_2:10728612-10728631 | Msa0756470:intron | 40.0% | |
| TTTCTTAGGGCAATATGTGC+TGG | - | chr5_2:10728655-10728674 | Msa0756470:intron | 40.0% | |
| ATATGTGCTGGAATTGGCAT+TGG | - | chr5_2:10728667-10728686 | Msa0756470:intron | 40.0% | |
| ! | TGGCTGAATTCTTTTTGCAG+AGG | - | chr5_2:10728687-10728706 | Msa0756470:intron | 40.0% |
| GAGAGAGTTTATGGCTTGAT+TGG | - | chr5_2:10728740-10728759 | Msa0756470:intron | 40.0% | |
| AGTTTATGGCTTGATTGGGA+AGG | - | chr5_2:10728745-10728764 | Msa0756470:intron | 40.0% | |
| ! | CTAGCAGCTTTAATCCACTT+AGG | + | chr5_2:10728779-10728798 | None:intergenic | 40.0% |
| ATTGTGAGGAGAGATAGAGA+AGG | - | chr5_2:10728839-10728858 | Msa0756470:intron | 40.0% | |
| ! | AGCTAGCTTACTGTCTAAAC+AGG | - | chr5_2:10729561-10729580 | Msa0756470:intron | 40.0% |
| ! | TCTATCGTAGGTCGGTATTT+TGG | - | chr5_2:10729734-10729753 | Msa0756470:intron | 40.0% |
| ! | CTATCGTAGGTCGGTATTTT+GGG | - | chr5_2:10729735-10729754 | Msa0756470:intron | 40.0% |
| !!! | TCGGTATTTTGGGCTTTGTT+TGG | - | chr5_2:10729745-10729764 | Msa0756470:intron | 40.0% |
| !!! | CGGTATTTTGGGCTTTGTTT+GGG | - | chr5_2:10729746-10729765 | Msa0756470:intron | 40.0% |
| !!! | GGTATTTTGGGCTTTGTTTG+GGG | - | chr5_2:10729747-10729766 | Msa0756470:intron | 40.0% |
| !! | GGGGCAATCTATCTTTGTTT+TGG | - | chr5_2:10729766-10729785 | Msa0756470:intron | 40.0% |
| AAAAGAACACGGTAGACTTC+TGG | + | chr5_2:10729796-10729815 | None:intergenic | 40.0% | |
| ATGCTCTGTTTACTCATCCA+AGG | - | chr5_2:10730193-10730212 | Msa0756470:intron | 40.0% | |
| TCCAAGTGCTCTCATAACTT+GGG | + | chr5_2:10730289-10730308 | None:intergenic | 40.0% | |
| ATCCAAGTGCTCTCATAACT+TGG | + | chr5_2:10730290-10730309 | None:intergenic | 40.0% | |
| ATTTAACACGAAGCCTGAGA+AGG | + | chr5_2:10730542-10730561 | None:intergenic | 40.0% | |
| TTTAGTGAGAGTGATTGGCA+AGG | - | chr5_2:10730575-10730594 | Msa0756470:intron | 40.0% | |
| TTAGTGAGAGTGATTGGCAA+GGG | - | chr5_2:10730576-10730595 | Msa0756470:intron | 40.0% | |
| GTATCACTGTAGGTGTAACA+AGG | + | chr5_2:10730637-10730656 | None:intergenic | 40.0% | |
| GATTGCTAAACAGCTAAACC+AGG | + | chr5_2:10730767-10730786 | None:intergenic | 40.0% | |
| !! | CACTTAGAACTTGAGTTGAG+AGG | + | chr5_2:10730853-10730872 | None:intergenic | 40.0% |
| AACTTGTCTAGTGCATATGC+GGG | - | chr5_2:10730923-10730942 | Msa0756470:CDS | 40.0% | |
| ! | CTTCTAAAAAAAGGGCAACC+CGG | + | chr5_2:10730961-10730980 | None:intergenic | 40.0% |
| ! | AGGTACTGTTCTTTCGTTTG+TGG | - | chr5_2:10731178-10731197 | Msa0756470:intron | 40.0% |
| AAAAAAGTGAGGTGAGGAGA+CGG | - | chr5_2:10731317-10731336 | Msa0756470:intron | 40.0% | |
| AGATCAGGGTCAGGAAATAA+AGG | + | chr5_2:10731476-10731495 | None:intergenic | 40.0% | |
| GCGGAATTTCCACTTAGATA+TGG | - | chr5_2:10731583-10731602 | Msa0756470:intron | 40.0% | |
| TGCATCAAGCCTCAAAAACA+TGG | + | chr5_2:10731819-10731838 | None:intergenic | 40.0% | |
| TATTACTGACGAGACAGAGA+AGG | - | chr5_2:10732048-10732067 | Msa0756470:CDS | 40.0% | |
| ATTACTGACGAGACAGAGAA+GGG | - | chr5_2:10732049-10732068 | Msa0756470:CDS | 40.0% | |
| ! | ATGAAGCATTTAGATGCTCC+TGG | - | chr5_2:10732201-10732220 | Msa0756470:CDS | 40.0% |
| ! | TGAAGCATTTAGATGCTCCT+GGG | - | chr5_2:10732202-10732221 | Msa0756470:CDS | 40.0% |
| AGCTTGATTAACAGCTGTTG+TGG | + | chr5_2:10732373-10732392 | None:intergenic | 40.0% | |
| ! | ACATGGCAATAGAGTACTCT+CGG | - | chr5_2:10732508-10732527 | Msa0756470:CDS | 40.0% |
| CAGGGGGATGGAAAAATAAA+AGG | + | chr5_2:10732546-10732565 | None:intergenic | 40.0% | |
| !!! | CTTTTATTTTTCCATCCCCC+TGG | - | chr5_2:10732544-10732563 | Msa0756470:CDS | 40.0% |
| ATCATGGTAAGGAAAACCAG+GGG | + | chr5_2:10732563-10732582 | None:intergenic | 40.0% | |
| ATCTCTGTTCCGGTTATCTA+AGG | + | chr5_2:10732678-10732697 | None:intergenic | 40.0% | |
| ATGTATCCTCATCTCTGTTC+CGG | + | chr5_2:10732688-10732707 | None:intergenic | 40.0% | |
| TTGTAGATGAAGGGGTTTGG+GGG | + | chr5_2:10727952-10727971 | None:intergenic | 45.0% | |
| GGAGGGGTTGTGAAGATTAA+TGG | + | chr5_2:10728009-10728028 | None:intergenic | 45.0% | |
| ! | GTGCTGGGAAATGTTGATAG+TGG | + | chr5_2:10728043-10728062 | None:intergenic | 45.0% |
| AAGAGGGTAGTTTCGGGATT+TGG | + | chr5_2:10728189-10728208 | None:intergenic | 45.0% | |
| AACGTGAAGAGGGTAGTTTC+GGG | + | chr5_2:10728195-10728214 | None:intergenic | 45.0% | |
| GAACGTGAAGAGGGTAGTTT+CGG | + | chr5_2:10728196-10728215 | None:intergenic | 45.0% | |
| GTCTTTGTTCTCTCACACGA+AGG | + | chr5_2:10728602-10728621 | None:intergenic | 45.0% | |
| AAGACGAAGCATGTTAGGTC+TGG | - | chr5_2:10728617-10728636 | Msa0756470:intron | 45.0% | |
| AGACGAAGCATGTTAGGTCT+GGG | - | chr5_2:10728618-10728637 | Msa0756470:intron | 45.0% | |
| ATGTTAGGTCTGGGCATTCT+AGG | - | chr5_2:10728627-10728646 | Msa0756470:intron | 45.0% | |
| AGGGCAATATGTGCTGGAAT+TGG | - | chr5_2:10728661-10728680 | Msa0756470:intron | 45.0% | |
| !!! | TCTTTTTGCAGAGGTATCCG+AGG | - | chr5_2:10728696-10728715 | Msa0756470:intron | 45.0% |
| !!! | CTTTTTGCAGAGGTATCCGA+GGG | - | chr5_2:10728697-10728716 | Msa0756470:intron | 45.0% |
| CCATAAACTCTCTCCCTCAT+CGG | + | chr5_2:10728734-10728753 | None:intergenic | 45.0% | |
| GGAAGGAGAATTTGCCTAAG+TGG | - | chr5_2:10728762-10728781 | Msa0756470:intron | 45.0% | |
| GCGCAAACAACTTGAAGATG+TGG | - | chr5_2:10729864-10729883 | Msa0756470:intron | 45.0% | |
| ! | TGAGTAAACAGAGCATCTGC+AGG | + | chr5_2:10730189-10730208 | None:intergenic | 45.0% |
| ! | ACACATGCTCTAAACAGCCT+TGG | + | chr5_2:10730213-10730232 | None:intergenic | 45.0% |
| CCAAGTGCTCTCATAACTTG+GGG | + | chr5_2:10730288-10730307 | None:intergenic | 45.0% | |
| TTCCAGAAATTACCGAAGCC+AGG | - | chr5_2:10730334-10730353 | Msa0756470:intron | 45.0% | |
| TTCCTGGCTTCGGTAATTTC+TGG | + | chr5_2:10730339-10730358 | None:intergenic | 45.0% | |
| AAGCTCTATGTTCCTGGCTT+CGG | + | chr5_2:10730349-10730368 | None:intergenic | 45.0% | |
| AAGTCCAAGCTCTATGTTCC+TGG | + | chr5_2:10730355-10730374 | None:intergenic | 45.0% | |
| AGGAACATAGAGCTTGGACT+TGG | - | chr5_2:10730354-10730373 | Msa0756470:intron | 45.0% | |
| TCATGTAGTGAACTGCGCAA+AGG | + | chr5_2:10730809-10730828 | None:intergenic | 45.0% | |
| GCAGAAAACAAAGCTGCAAG+TGG | + | chr5_2:10731086-10731105 | None:intergenic | 45.0% | |
| AAAAAGTGAGGTGAGGAGAC+GGG | - | chr5_2:10731318-10731337 | Msa0756470:intron | 45.0% | |
| ! | TCACATCTAAGATCAGGGTC+AGG | + | chr5_2:10731485-10731504 | None:intergenic | 45.0% |
| AACCTAAGAGAAAGATGGGC+AGG | - | chr5_2:10731553-10731572 | Msa0756470:intron | 45.0% | |
| ACCTAAGAGAAAGATGGGCA+GGG | - | chr5_2:10731554-10731573 | Msa0756470:intron | 45.0% | |
| AAGATGGGCAGGGAATTATG+CGG | - | chr5_2:10731564-10731583 | Msa0756470:intron | 45.0% | |
| CTGCAGTACAATTACGGGAA+GGG | - | chr5_2:10731645-10731664 | Msa0756470:intron | 45.0% | |
| CAATTACGGGAAGGGATGTT+TGG | - | chr5_2:10731653-10731672 | Msa0756470:intron | 45.0% | |
| ! | TGGTTTGAGACTTTGAGCAG+TGG | - | chr5_2:10731735-10731754 | Msa0756470:intron | 45.0% |
| ! | ATGATGCTAACAAGGGGCAT+CGG | - | chr5_2:10731895-10731914 | Msa0756470:CDS | 45.0% |
| ATTTAGATGCTCCTGGGTTG+TGG | - | chr5_2:10732208-10732227 | Msa0756470:CDS | 45.0% | |
| GATTAACAGCTGTTGTGGCT+GGG | + | chr5_2:10732368-10732387 | None:intergenic | 45.0% | |
| TGATTAACAGCTGTTGTGGC+TGG | + | chr5_2:10732369-10732388 | None:intergenic | 45.0% | |
| TCATGGTAAGGAAAACCAGG+GGG | + | chr5_2:10732562-10732581 | None:intergenic | 45.0% | |
| AACTGGGCTCCTTAGATAAC+CGG | - | chr5_2:10732666-10732685 | Msa0756470:exon | 45.0% | |
| AGATAACCGGAACAGAGATG+AGG | - | chr5_2:10732679-10732698 | Msa0756470:five_prime_UTR | 45.0% | |
| ACTGCTTGTTCTACTCTCCA+TGG | - | chr5_2:10732713-10732732 | Msa0756470:five_prime_UTR | 45.0% | |
| !!! | GTGTTGCTGGGTTTTGGACA+GGG | + | chr5_2:10727925-10727944 | None:intergenic | 50.0% |
| !!! | TGTGTTGCTGGGTTTTGGAC+AGG | + | chr5_2:10727926-10727945 | None:intergenic | 50.0% |
| !! | GGGTTTGTGTTGCTGGGTTT+TGG | + | chr5_2:10727931-10727950 | None:intergenic | 50.0% |
| ! | TTTGGGGGGTTTGTGTTGCT+GGG | + | chr5_2:10727937-10727956 | None:intergenic | 50.0% |
| TGTAGATGAAGGGGTTTGGG+GGG | + | chr5_2:10727951-10727970 | None:intergenic | 50.0% | |
| TTGGATGGGGAAAGGAGAGA+AGG | + | chr5_2:10728150-10728169 | None:intergenic | 50.0% | |
| CAACTGCGAGAACGTGAAGA+GGG | + | chr5_2:10728205-10728224 | None:intergenic | 50.0% | |
| CTCACACGAAGGATGCTGAA+AGG | + | chr5_2:10728591-10728610 | None:intergenic | 50.0% | |
| CCGATGAGGGAGAGAGTTTA+TGG | - | chr5_2:10728731-10728750 | Msa0756470:intron | 50.0% | |
| CGGAATGGATCCAGATGATG+AGG | - | chr5_2:10729825-10729844 | Msa0756470:intron | 50.0% | |
| ATGATGAGGATTGCCAGCCT+AGG | - | chr5_2:10729839-10729858 | Msa0756470:intron | 50.0% | |
| TGATGAGGATTGCCAGCCTA+GGG | - | chr5_2:10729840-10729859 | Msa0756470:intron | 50.0% | |
| ! | TCAAGTTGTTTGCGCTCCCT+AGG | + | chr5_2:10729859-10729878 | None:intergenic | 50.0% |
| ! | GTAAACAGAGCATCTGCAGG+AGG | + | chr5_2:10730186-10730205 | None:intergenic | 50.0% |
| ! | TTTAGAGCATGTGTTCCCCC+TGG | - | chr5_2:10730219-10730238 | Msa0756470:intron | 50.0% |
| TCTGAATCGATGCATGCCAG+GGG | + | chr5_2:10730238-10730257 | None:intergenic | 50.0% | |
| CTCTGAATCGATGCATGCCA+GGG | + | chr5_2:10730239-10730258 | None:intergenic | 50.0% | |
| !! | CCCCAAGTTATGAGAGCACT+TGG | - | chr5_2:10730285-10730304 | Msa0756470:intron | 50.0% |
| GAAGCCAGGAACATAGAGCT+TGG | - | chr5_2:10730348-10730367 | Msa0756470:intron | 50.0% | |
| AGAGCTTGGACTTGGATTGC+AGG | - | chr5_2:10730362-10730381 | Msa0756470:intron | 50.0% | |
| TGGCCTCTCTTGCTAGAGTA+CGG | - | chr5_2:10730451-10730470 | Msa0756470:CDS | 50.0% | |
| AAAAGTGAGGTGAGGAGACG+GGG | - | chr5_2:10731319-10731338 | Msa0756470:intron | 50.0% | |
| TCCCTGCCCATCTTTCTCTT+AGG | + | chr5_2:10731558-10731577 | None:intergenic | 50.0% | |
| GCTGCAGTACAATTACGGGA+AGG | - | chr5_2:10731644-10731663 | Msa0756470:intron | 50.0% | |
| GTTACTGAAGGTGAGGCTTG+AGG | - | chr5_2:10731709-10731728 | Msa0756470:intron | 50.0% | |
| GAAGGTGAGGCTTGAGGTAT+TGG | - | chr5_2:10731715-10731734 | Msa0756470:intron | 50.0% | |
| !! | GGTGGGTGACCATGTTTTTG+AGG | - | chr5_2:10731807-10731826 | Msa0756470:intron | 50.0% |
| !! | TGATGCTAACAAGGGGCATC+GGG | - | chr5_2:10731896-10731915 | Msa0756470:CDS | 50.0% |
| AAACCGCTTATGAGCGCAAC+CGG | - | chr5_2:10732331-10732350 | Msa0756470:CDS | 50.0% | |
| TGAGCAGGTTCAGCCTAAAG+AGG | - | chr5_2:10732464-10732483 | Msa0756470:CDS | 50.0% | |
| ACTCTCCATGGCTCAGATCA+TGG | - | chr5_2:10732725-10732744 | Msa0756470:five_prime_UTR | 50.0% | |
| TTGCTCCATGATCTGAGCCA+TGG | + | chr5_2:10732733-10732752 | None:intergenic | 50.0% | |
| !!! | TGCTGGGTTTTGGACAGGGT+TGG | + | chr5_2:10727921-10727940 | None:intergenic | 55.0% |
| GTTTGGGGGGTTTGTGTTGC+TGG | + | chr5_2:10727938-10727957 | None:intergenic | 55.0% | |
| GATGGGGAAAGGAGAGAAGG+AGG | + | chr5_2:10728147-10728166 | None:intergenic | 55.0% | |
| GCAACTGCGAGAACGTGAAG+AGG | + | chr5_2:10728206-10728225 | None:intergenic | 55.0% | |
| GCATTGTTAAGGCGCGACGA+AGG | + | chr5_2:10728443-10728462 | None:intergenic | 55.0% | |
| CTCGAAGCGAAACAAGCGCT+TGG | - | chr5_2:10728491-10728510 | Msa0756470:CDS | 55.0% | |
| AGGTATCCGAGGGAATTGCC+TGG | - | chr5_2:10728707-10728726 | Msa0756470:intron | 55.0% | |
| ATCGGACCAGGCAATTCCCT+CGG | + | chr5_2:10728716-10728735 | None:intergenic | 55.0% | |
| GGAATTGCCTGGTCCGATGA+GGG | - | chr5_2:10728718-10728737 | Msa0756470:intron | 55.0% | |
| GGCTGGCAATCCTCATCATC+TGG | + | chr5_2:10729838-10729857 | None:intergenic | 55.0% | |
| CTGAATCGATGCATGCCAGG+GGG | + | chr5_2:10730237-10730256 | None:intergenic | 55.0% | |
| CCTCTGAATCGATGCATGCC+AGG | + | chr5_2:10730240-10730259 | None:intergenic | 55.0% | |
| !! | CCTGGCATGCATCGATTCAG+AGG | - | chr5_2:10730237-10730256 | Msa0756470:intron | 55.0% |
| CAGCCGTACTCTAGCAAGAG+AGG | + | chr5_2:10730457-10730476 | None:intergenic | 55.0% | |
| CTTGATGCAGAGCGAGACAC+AGG | - | chr5_2:10731830-10731849 | Msa0756470:intron | 55.0% | |
| GTTTCGCCTTCCAGAAGCTC+GGG | + | chr5_2:10731972-10731991 | None:intergenic | 55.0% | |
| GGTTTCGCCTTCCAGAAGCT+CGG | + | chr5_2:10731973-10731992 | None:intergenic | 55.0% | |
| CGAAACCTTATGCGAGCCGT+TGG | - | chr5_2:10731986-10732005 | Msa0756470:CDS | 55.0% | |
| TGCTTCCAACGGCTCGCATA+AGG | + | chr5_2:10731994-10732013 | None:intergenic | 55.0% | |
| TTCTCTTGCAGCCACAACCC+AGG | + | chr5_2:10732222-10732241 | None:intergenic | 55.0% | |
| TCTCCGGTTGCGCTCATAAG+CGG | + | chr5_2:10732337-10732356 | None:intergenic | 55.0% | |
| CTTATGAGCGCAACCGGAGA+CGG | - | chr5_2:10732337-10732356 | Msa0756470:CDS | 55.0% | |
| GGTAAGGAAAACCAGGGGGA+TGG | + | chr5_2:10732558-10732577 | None:intergenic | 55.0% | |
| GGGAATTGCCTGGTCCGATG+AGG | - | chr5_2:10728717-10728736 | Msa0756470:intron | 60.0% | |
| ACTCTCTCCCTCATCGGACC+AGG | + | chr5_2:10728728-10728747 | None:intergenic | 60.0% | |
| GTTGTTTGCGCTCCCTAGGC+TGG | + | chr5_2:10729855-10729874 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr5_2:10730939-10730958 | Msa0756470:CDS | 60.0% |
| ! | GGCATCGGGACAGATGCTGA+GGG | - | chr5_2:10731910-10731929 | Msa0756470:CDS | 60.0% |
| GCATCGGGACAGATGCTGAG+GGG | - | chr5_2:10731911-10731930 | Msa0756470:CDS | 60.0% | |
| CATCGGGACAGATGCTGAGG+GGG | - | chr5_2:10731912-10731931 | Msa0756470:CDS | 60.0% | |
| CTGAGTGTCTCCCGAGCTTC+TGG | - | chr5_2:10731959-10731978 | Msa0756470:CDS | 60.0% | |
| GTGTCTCCCGAGCTTCTGGA+AGG | - | chr5_2:10731963-10731982 | Msa0756470:CDS | 60.0% | |
| TGGCTGGGTTTCTCCGTCTC+CGG | + | chr5_2:10732353-10732372 | None:intergenic | 60.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr5_2:10730940-10730959 | Msa0756470:CDS | 65.0% |
| TGAGGTGAGGAGACGGGGAC+TGG | - | chr5_2:10731324-10731343 | Msa0756470:intron | 65.0% | |
| GAGGTGAGGAGACGGGGACT+GGG | - | chr5_2:10731325-10731344 | Msa0756470:intron | 65.0% | |
| GAGACGGGGACTGGGACTCA+TGG | - | chr5_2:10731333-10731352 | Msa0756470:intron | 65.0% | |
| !! | GGGCATCGGGACAGATGCTG+AGG | - | chr5_2:10731909-10731928 | Msa0756470:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 10727916 | 10732842 | 10727916 | ID=Msa0756470;Name=Msa0756470 |
| chr5_2 | mRNA | 10727916 | 10732842 | 10727916 | ID=Msa0756470-mRNA-1;Parent=Msa0756470;Name=Msa0756470-mRNA-1;_AED=0.05;_eAED=0.05;_QI=170|0.75|0.8|1|1|1|5|351|539 |
| chr5_2 | exon | 10727916 | 10728584 | 10727916 | ID=Msa0756470-mRNA-1:exon:4869;Parent=Msa0756470-mRNA-1 |
| chr5_2 | exon | 10729579 | 10729665 | 10729579 | ID=Msa0756470-mRNA-1:exon:4868;Parent=Msa0756470-mRNA-1 |
| chr5_2 | exon | 10730375 | 10730575 | 10730375 | ID=Msa0756470-mRNA-1:exon:4867;Parent=Msa0756470-mRNA-1 |
| chr5_2 | exon | 10730786 | 10731014 | 10730786 | ID=Msa0756470-mRNA-1:exon:4866;Parent=Msa0756470-mRNA-1 |
| chr5_2 | exon | 10731888 | 10732842 | 10731888 | ID=Msa0756470-mRNA-1:exon:4865;Parent=Msa0756470-mRNA-1 |
| chr5_2 | five_prime_UTR | 10732673 | 10732842 | 10732673 | ID=Msa0756470-mRNA-1:five_prime_utr;Parent=Msa0756470-mRNA-1 |
| chr5_2 | CDS | 10731888 | 10732672 | 10731888 | ID=Msa0756470-mRNA-1:cds;Parent=Msa0756470-mRNA-1 |
| chr5_2 | CDS | 10730786 | 10731014 | 10730786 | ID=Msa0756470-mRNA-1:cds;Parent=Msa0756470-mRNA-1 |
| chr5_2 | CDS | 10730375 | 10730575 | 10730375 | ID=Msa0756470-mRNA-1:cds;Parent=Msa0756470-mRNA-1 |
| chr5_2 | CDS | 10729579 | 10729665 | 10729579 | ID=Msa0756470-mRNA-1:cds;Parent=Msa0756470-mRNA-1 |
| chr5_2 | CDS | 10728267 | 10728584 | 10728267 | ID=Msa0756470-mRNA-1:cds;Parent=Msa0756470-mRNA-1 |
| chr5_2 | three_prime_UTR | 10727916 | 10728266 | 10727916 | ID=Msa0756470-mRNA-1:three_prime_utr;Parent=Msa0756470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
