AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0866800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866800 MtrunA17_Chr4g0022251 97.476 634 16 0 1 634 1 634 0.0 1301
Msa0866800 MtrunA17_Chr1g0173511 86.885 488 52 3 142 617 5 492 0.0 876
Msa0866800 MtrunA17_Chr3g0116051 35.823 589 313 18 68 634 58 603 6.69e-112 349
Msa0866800 MtrunA17_Chr4g0057551 36.014 572 308 16 83 634 74 607 1.30e-109 343
Msa0866800 MtrunA17_Chr8g0364481 35.902 571 309 16 83 634 60 592 4.40e-109 341
Msa0866800 MtrunA17_Chr5g0419621 33.997 653 357 21 1 634 2 599 2.75e-108 339
Msa0866800 MtrunA17_Chr4g0043001 34.791 526 247 21 173 632 85 580 1.13e-71 244
Msa0866800 MtrunA17_Chr4g0043021 31.177 603 295 22 87 632 41 580 2.95e-69 237
Msa0866800 MtrunA17_Chr3g0116091 30.396 454 240 13 199 634 4 399 1.46e-65 221
Msa0866800 MtrunA17_Chr1g0173501 76.667 150 26 3 1 142 1 149 2.15e-58 194
Msa0866800 MtrunA17_Chr3g0116071 31.975 319 141 9 195 506 4 253 2.93e-44 158
Msa0866800 MtrunA17_Chr7g0266131 28.851 409 223 13 206 606 45 393 5.72e-41 154
Msa0866800 MtrunA17_Chr1g0178831 29.379 354 192 9 283 622 102 411 6.12e-37 143
Msa0866800 MtrunA17_Chr5g0443881 28.609 381 208 13 231 604 62 385 2.91e-35 138
Msa0866800 MtrunA17_Chr3g0098721 28.614 332 190 9 231 555 56 347 1.24e-34 136
Msa0866800 MtrunA17_Chr4g0064541 29.771 393 209 17 209 581 45 390 9.36e-33 132
Msa0866800 MtrunA17_Chr7g0266151 27.586 377 198 13 216 581 47 359 2.76e-32 129
Msa0866800 MtrunA17_Chr1g0211041 28.272 382 214 14 216 581 56 393 4.34e-31 127
Msa0866800 MtrunA17_Chr4g0019091 27.229 415 216 15 220 604 59 417 2.81e-30 124
Msa0866800 MtrunA17_Chr7g0236041 27.273 363 200 10 223 546 76 413 1.43e-27 117
Msa0866800 MtrunA17_Chr3g0121411 25.823 395 222 11 223 575 77 442 5.53e-27 115
Msa0866800 MtrunA17_Chr3g0121431 25.316 395 224 11 223 575 132 497 1.83e-26 114
Msa0866800 MtrunA17_Chr6g0453731 27.211 294 159 6 283 546 146 414 3.92e-26 113
Msa0866800 MtrunA17_Chr4g0019071 28.462 260 149 9 362 604 55 294 4.52e-22 98.2
Msa0866800 MtrunA17_Chr3g0116081 31.356 118 73 3 518 634 5 115 2.29e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866800 AT5G50400.1 35.437 618 340 15 37 634 13 591 6.07e-119 367
Msa0866800 AT5G50400.2 36.976 549 296 12 105 634 2 519 1.62e-113 351
Msa0866800 AT4G24890.1 35.478 575 314 17 79 634 59 595 4.37e-113 352
Msa0866800 AT1G13750.1 37.522 565 283 17 96 634 73 593 6.71e-112 349
Msa0866800 AT2G03450.1 31.738 627 300 21 68 632 17 577 2.15e-73 248
Msa0866800 AT1G13900.1 31.023 606 318 22 73 632 26 577 7.35e-68 234
Msa0866800 AT3G20500.1 29.058 382 205 13 231 604 60 383 3.57e-35 138
Msa0866800 AT3G52820.1 27.273 385 217 9 241 606 46 386 7.27e-33 132
Msa0866800 AT4G36350.1 28.329 413 234 13 220 609 55 428 1.31e-32 131
Msa0866800 AT1G56360.1 28.851 409 222 16 220 604 54 417 3.34e-32 130
Msa0866800 AT5G34850.1 27.551 392 217 16 210 581 45 389 9.48e-30 123
Msa0866800 AT4G13700.1 27.168 346 217 9 226 546 73 408 3.03e-29 121
Msa0866800 AT3G52780.1 29.044 272 161 6 283 549 100 344 1.53e-28 119
Msa0866800 AT3G52810.1 28.000 275 166 6 279 550 103 348 2.68e-28 118
Msa0866800 AT2G27190.1 26.241 423 235 15 187 581 23 396 2.24e-27 116
Msa0866800 AT3G52780.2 28.409 264 157 6 283 541 100 336 1.82e-26 111
Msa0866800 AT4G13700.2 27.434 339 205 11 226 536 73 398 1.74e-25 109
Msa0866800 AT3G07130.1 27.385 325 175 9 283 575 140 435 8.13e-25 109
Msa0866800 AT2G18130.1 30.279 251 140 8 370 604 167 398 9.93e-25 108
Msa0866800 AT2G16430.2 27.619 315 176 12 283 581 117 395 5.74e-23 102
Msa0866800 AT3G07130.2 26.027 292 162 7 283 545 140 406 1.82e-21 99.0
Msa0866800 AT2G16430.1 27.857 280 156 10 316 581 28 275 3.98e-21 95.9
Msa0866800 AT2G32770.2 24.768 323 171 9 283 560 68 363 4.12e-20 94.0
Msa0866800 AT2G32770.3 24.768 323 171 9 283 560 149 444 6.43e-20 94.4
Msa0866800 AT3G46120.1 25.830 271 143 7 347 604 116 341 1.44e-17 85.5
Msa0866800 AT2G32770.1 22.327 318 156 8 283 560 149 415 1.06e-13 74.3

Find 157 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCATTTCCTTTGGTGATA+TGG 0.160418 5_4:-68818642 Msa0866800:CDS
CTGATAATGCAGTAAAATTT+TGG 0.174680 5_4:+68823892 None:intergenic
CCTAGTCCTGCCAAGGATTT+TGG 0.184357 5_4:-68819047 Msa0866800:CDS
AATCCTAAGAAGCCACTTTA+TGG 0.194096 5_4:-68819853 Msa0866800:CDS
CATTCATGGAATCCTCAAAT+TGG 0.201189 5_4:-68824028 Msa0866800:exon
CCTGATTATGACAAGAAATA+AGG 0.226305 5_4:+68816010 None:intergenic
AGCTGGTGGAGTTGAAAATT+TGG 0.227346 5_4:+68818685 None:intergenic
TGTCCATAAAGTGGCTTCTT+AGG 0.235315 5_4:+68819850 None:intergenic
TTCAGAGATTATGTCGATTC+TGG 0.253362 5_4:-68818022 Msa0866800:intron
TAGAAATGATTTAAGCTTAG+AGG 0.258127 5_4:-68816476 Msa0866800:intron
GCCATTGCTGTTACAGAATA+AGG 0.264422 5_4:-68817334 Msa0866800:intron
AGAAAATGTGGCCTTGGTTT+TGG 0.278781 5_4:+68824127 None:intergenic
CCTTATTTCTTGTCATAATC+AGG 0.300265 5_4:-68816010 Msa0866800:three_prime_UTR
AGATTATAGAATTTGAATTA+AGG 0.305309 5_4:+68824068 None:intergenic
TTCATTTCCTTTGGTGATAT+GGG 0.313819 5_4:-68818641 Msa0866800:CDS
TTTCCATTCATATTCATTCA+TGG 0.318705 5_4:-68824042 Msa0866800:exon
CAGCTCAAATTCTAAATTGT+TGG 0.325166 5_4:-68823799 Msa0866800:CDS
TAGTAATGATGATAACTCTT+AGG 0.327889 5_4:+68824190 None:intergenic
GCAGTATAACTGGATGAAAA+AGG 0.337674 5_4:-68817741 Msa0866800:intron
TAGACATTGAAGGGCTAATA+AGG 0.346423 5_4:+68823970 None:intergenic
GAGCTCAAATTCATTTCCTT+TGG 0.349534 5_4:-68818650 Msa0866800:CDS
CGAAACCGAGAGATGGAGAT+TGG 0.349856 5_4:-68823740 Msa0866800:CDS
TTGAAAAGGATTTCTGAGTT+TGG 0.356122 5_4:-68816520 Msa0866800:CDS
AACTTTCCCTTCCTCAACTT+TGG 0.356583 5_4:-68823946 Msa0866800:CDS
TTTCTCAGCCCCTGCCTTGT+TGG 0.369987 5_4:-68819901 Msa0866800:CDS
GGCTTATCCTTTGCTGCAGT+TGG 0.372410 5_4:+68817932 None:intergenic
AAAGGAAGAAAATGTGGCCT+TGG 0.387156 5_4:+68824121 None:intergenic
TTGAAGCTACTGGACTAATA+AGG 0.387415 5_4:+68818186 None:intergenic
TATTCTTACTTGGAATTTGA+AGG 0.390234 5_4:+68823702 None:intergenic
GAGTTCTATTATTTACAAAC+TGG 0.393218 5_4:-68823565 Msa0866800:CDS
TCCTTTGCTGCAGTTGGCAT+TGG 0.393804 5_4:+68817938 None:intergenic
CTGATTATGACAAGAAATAA+GGG 0.394446 5_4:+68816011 None:intergenic
ATTGTTTGAGAATTTGTCTA+AGG 0.400148 5_4:+68817062 None:intergenic
ATCAGATACAAGAGAAGTTA+AGG 0.412947 5_4:-68816324 Msa0866800:CDS
CATGCTGTCATTGGCATGGC+TGG 0.413111 5_4:-68817090 Msa0866800:CDS
TTCCTCAACTTTGGACCTTA+CGG 0.414650 5_4:-68823937 Msa0866800:CDS
AGAAACAAACGTAGAATTGT+AGG 0.415595 5_4:-68816256 Msa0866800:three_prime_UTR
AGTGCTTACTCCTACAGATA+TGG 0.417269 5_4:-68818969 Msa0866800:CDS
ATTCATGGAATCCTCAAATT+GGG 0.419365 5_4:-68824027 Msa0866800:exon
CTGTAGGAGTAAGCACTTGA+TGG 0.420678 5_4:+68818975 None:intergenic
TCAGCCCCTGCCTTGTTGGA+AGG 0.422865 5_4:-68819897 Msa0866800:CDS
CATTCCTATAAAAGATCAAA+AGG 0.427448 5_4:-68817154 Msa0866800:CDS
TTTAGATGATAATCCGTTGT+TGG 0.430584 5_4:+68817383 None:intergenic
AAACACTGAGTTTACATTGT+TGG 0.436214 5_4:+68818268 None:intergenic
GACCGAGCTAGACTTTAAAT+AGG 0.437314 5_4:+68815902 None:intergenic
CTGATATTCAGTTTAAGATA+AGG 0.443765 5_4:+68823819 None:intergenic
TAGGTCCTTGTTGGACGGCC+TGG 0.450025 5_4:+68815933 None:intergenic
GGAGACATAAGTTATGCAAC+TGG 0.453721 5_4:-68818239 Msa0866800:CDS
TATGAAACTCTTGAAGCTAC+TGG 0.454406 5_4:+68818176 None:intergenic
GTTTCATACATGACAGCAAT+CGG 0.454768 5_4:-68818161 Msa0866800:CDS
ATCATCATTACTATAAGAAA+AGG 0.457395 5_4:-68824180 Msa0866800:five_prime_UTR
GGTCTAGTAACTCGGCTGAT+TGG 0.457957 5_4:-68818718 Msa0866800:intron
CAGCAAATCCAATATGCAAA+TGG 0.463555 5_4:-68819242 Msa0866800:CDS
TTTGTCACGGTTACCGTCAC+CGG 0.464369 5_4:-68823768 Msa0866800:CDS
GGACTATTCCCATCCTAGGT+AGG 0.468647 5_4:+68815954 None:intergenic
ATAGAGTTTGTGTTCTTCAC+TGG 0.469598 5_4:-68819928 Msa0866800:CDS
ATGTTTGAGAACCCAATTTG+AGG 0.472251 5_4:+68824016 None:intergenic
ATTCCATGAATGAATATGAA+TGG 0.472503 5_4:+68824039 None:intergenic
GCTAGACCATAGGTCCTTGT+TGG 0.477756 5_4:+68815924 None:intergenic
TTGATAACCGATAGTGCTCC+AGG 0.477995 5_4:+68818314 None:intergenic
CTGAGAGCTGGAGCTTGAAA+AGG 0.484148 5_4:-68816534 Msa0866800:CDS
AGCTCATCTGATCCTCCAGC+TGG 0.484295 5_4:+68818668 None:intergenic
CCAAAATCCTTGGCAGGACT+AGG 0.485338 5_4:+68819047 None:intergenic
GACTATTCCCATCCTAGGTA+GGG 0.489876 5_4:+68815955 None:intergenic
TTCAGAAGAACACTACATTC+AGG 0.496934 5_4:-68818600 Msa0866800:intron
CCACATTCACCACCAGAGTC+AGG 0.499819 5_4:+68817983 None:intergenic
AACCGTAAGGTCCAAAGTTG+AGG 0.499979 5_4:+68823935 None:intergenic
GCTCCTGTACATGCTGTCAT+TGG 0.501222 5_4:-68817099 Msa0866800:CDS
GTTTATGTTACTCCTGACTC+TGG 0.501264 5_4:-68817995 Msa0866800:CDS
AATGCAAGAAAGAACAGAAT+GGG 0.502167 5_4:-68820014 Msa0866800:CDS
TATTATACCCCTACCTAGGA+TGG 0.502501 5_4:-68815963 Msa0866800:three_prime_UTR
ATGAGATTGACATGGGTTAG+TGG 0.502611 5_4:-68819278 Msa0866800:CDS
GGCCGTCCAACAAGGACCTA+TGG 0.503984 5_4:-68815930 Msa0866800:three_prime_UTR
TGCATTGGCAGGCTGAGAGC+TGG 0.506342 5_4:-68816546 Msa0866800:intron
AGTGGACCTTCCAACAAGGC+AGG 0.508899 5_4:+68819891 None:intergenic
ATTTAGTGTGTTTAACCGTA+AGG 0.512631 5_4:+68823922 None:intergenic
TGAGATTGACATGGGTTAGT+GGG 0.513254 5_4:-68819277 Msa0866800:CDS
GAGTTTGTGTTCTTCACTGG+TGG 0.514565 5_4:-68819925 Msa0866800:CDS
TGCCATCCAAAATCCTTGGC+AGG 0.514716 5_4:+68819041 None:intergenic
GGGAAAGTTGTAGACATTGA+AGG 0.519414 5_4:+68823960 None:intergenic
CCTGACTCTGGTGGTGAATG+TGG 0.520849 5_4:-68817983 Msa0866800:CDS
TGAACAGCCTGGAGCACTAT+CGG 0.522454 5_4:-68818321 Msa0866800:intron
AGTGCTGAATGGATGAATCC+TGG 0.523299 5_4:+68819014 None:intergenic
TCCAATGCCAACTGCAGCAA+AGG 0.523966 5_4:-68817939 Msa0866800:CDS
TTAATAGACAACATACTCCT+TGG 0.526063 5_4:-68817706 Msa0866800:CDS
ACCGAGAGATGGAGATTGGT+TGG 0.528220 5_4:-68823736 Msa0866800:CDS
CTTGAGATATGTCCATAAAG+TGG 0.530030 5_4:+68819841 None:intergenic
GACATACCTTGACAGGGTAA+TGG 0.531072 5_4:+68823515 None:intergenic
GCCTTATTCTGTAACAGCAA+TGG 0.531563 5_4:+68817333 None:intergenic
ATCCATTCAGCACTTATGAC+AGG 0.531954 5_4:-68819005 Msa0866800:CDS
TAATATCAACCGAACATGAC+TGG 0.532916 5_4:-68817871 Msa0866800:CDS
ATGCCAATGACAGCATGTAC+AGG 0.534351 5_4:+68817096 None:intergenic
ATCATGCCATCCAAAATCCT+TGG 0.535399 5_4:+68819037 None:intergenic
TTCATACCTTCCATATCTGT+AGG 0.537773 5_4:+68818959 None:intergenic
GCCTGGACTATTCCCATCCT+AGG 0.539326 5_4:+68815950 None:intergenic
TCATCTGATCCTCCAGCTGG+TGG 0.542127 5_4:+68818671 None:intergenic
AGTTGTGCCTAGTCCTGCCA+AGG 0.542146 5_4:-68819054 Msa0866800:CDS
CTGGTCCGAAAATTCTGAGC+AGG 0.542863 5_4:-68817852 Msa0866800:intron
AAATTCTAAATTGTTGGATG+AGG 0.543261 5_4:-68823793 Msa0866800:CDS
ATTGGAAAGTATGTTTCATA+CGG 0.543798 5_4:+68817956 None:intergenic
GCCAACCAATCTCCATCTCT+CGG 0.544480 5_4:+68823735 None:intergenic
GAATGCAAGAAAGAACAGAA+TGG 0.545134 5_4:-68820015 Msa0866800:CDS
GCTTTGCCATTACCCTGTCA+AGG 0.547055 5_4:-68823521 Msa0866800:intron
TGTGCATGACATACCTTGAC+AGG 0.552123 5_4:+68823508 None:intergenic
TTTGCATATTGGATTTGCTG+AGG 0.552556 5_4:+68819245 None:intergenic
GGCGTTTCGAAACCGAGAGA+TGG 0.556098 5_4:-68823747 Msa0866800:CDS
TTTCATACATGACAGCAATC+GGG 0.557285 5_4:-68818160 Msa0866800:CDS
CCAATGATGGTCTAGTAACT+CGG 0.560138 5_4:-68818726 Msa0866800:intron
ACCTAGGATGGGAATAGTCC+AGG 0.560410 5_4:-68815951 Msa0866800:three_prime_UTR
CGGTTTCGAAACGCCGGTGA+CGG 0.566494 5_4:+68823755 None:intergenic
TGGACCTTCCAACAAGGCAG+GGG 0.567412 5_4:+68819893 None:intergenic
TTAGGATTAGCAAAACTCAA+AGG 0.568493 5_4:+68819868 None:intergenic
CCTTGGTACTCTATTGAACA+AGG 0.571416 5_4:-68817911 Msa0866800:CDS
GGAAAGTTGTAGACATTGAA+GGG 0.572421 5_4:+68823961 None:intergenic
CCGTTGTTGGAAGTGTACAT+TGG 0.575888 5_4:+68817396 None:intergenic
TGTACATGCTGTCATTGGCA+TGG 0.577657 5_4:-68817094 Msa0866800:CDS
GTCCTGTCATAAGTGCTGAA+TGG 0.579771 5_4:+68819003 None:intergenic
ATTCCTATAAAAGATCAAAA+GGG 0.581083 5_4:-68817153 Msa0866800:CDS
GTTCTTCTGAAGCATCAAGA+GGG 0.581323 5_4:+68818612 None:intergenic
GTGGACCTTCCAACAAGGCA+GGG 0.584213 5_4:+68819892 None:intergenic
ATCTCTCGGTTTCGAAACGC+CGG 0.585583 5_4:+68823749 None:intergenic
CTGCAGCAAAGGATAAGCCT+TGG 0.586086 5_4:-68817928 Msa0866800:CDS
GTAAGGTCCAAAGTTGAGGA+AGG 0.587368 5_4:+68823939 None:intergenic
AGCCTATTTAAAGTCTAGCT+CGG 0.589219 5_4:-68815904 Msa0866800:three_prime_UTR
TCAGAAATTTATTAACGCTG+TGG 0.590172 5_4:-68817358 Msa0866800:CDS
GACCATAGGTCCTTGTTGGA+CGG 0.591869 5_4:+68815928 None:intergenic
GAACATGAAACAGGTTGACT+TGG 0.593153 5_4:-68817241 Msa0866800:intron
ATTAGCAAAACTCAAAGGAG+TGG 0.611195 5_4:+68819873 None:intergenic
ATTATACCCCTACCTAGGAT+GGG 0.614341 5_4:-68815962 Msa0866800:three_prime_UTR
GTTGGATGAGGAGTTTGTCA+CGG 0.615270 5_4:-68823781 Msa0866800:CDS
TTCTTCTGAAGCATCAAGAG+GGG 0.617475 5_4:+68818613 None:intergenic
GACATGGGTTAGTGGGGACA+AGG 0.620413 5_4:-68819270 Msa0866800:CDS
GGTTTGAAAGGAAGAAAATG+TGG 0.620903 5_4:+68824115 None:intergenic
GAGATTGACATGGGTTAGTG+GGG 0.620979 5_4:-68819276 Msa0866800:CDS
GTAAACTCAGTGTTTCACAT+TGG 0.623186 5_4:-68818260 Msa0866800:CDS
TATGTTACTCCTGACTCTGG+TGG 0.623778 5_4:-68817992 Msa0866800:CDS
CCTTGTTCAATAGAGTACCA+AGG 0.623949 5_4:+68817911 None:intergenic
TTTGAATTAAGGCCAAACAA+AGG 0.624435 5_4:+68824079 None:intergenic
ACTATTCCCATCCTAGGTAG+GGG 0.629276 5_4:+68815956 None:intergenic
TGTTGCAGATGAGATTGACA+TGG 0.630845 5_4:-68819286 Msa0866800:intron
TAAGGTCCAAAGTTGAGGAA+GGG 0.632550 5_4:+68823940 None:intergenic
TTCTCTCATAGTTATGCACA+TGG 0.637196 5_4:+68817208 None:intergenic
CCAATGTACACTTCCAACAA+CGG 0.640358 5_4:-68817396 Msa0866800:CDS
CTTTAAATAGGCTAGACCAT+AGG 0.641879 5_4:+68815914 None:intergenic
TGTTCTTCTGAAGCATCAAG+AGG 0.645423 5_4:+68818611 None:intergenic
ATAGTCCAGGCCGTCCAACA+AGG 0.645533 5_4:-68815938 Msa0866800:three_prime_UTR
ATAGATATACTAAAATGCAA+AGG 0.646265 5_4:-68816195 Msa0866800:three_prime_UTR
CAGCAATCGGGAATCATGAG+AGG 0.646921 5_4:-68818148 Msa0866800:intron
AAGGAGTGGACCTTCCAACA+AGG 0.647985 5_4:+68819887 None:intergenic
TTCATATTATACCCCTACCT+AGG 0.651609 5_4:-68815967 Msa0866800:three_prime_UTR
TACCCCATGAAAATCAGCCA+AGG 0.655808 5_4:+68817689 None:intergenic
ACAGGGTAATGGCAAAGCAG+AGG 0.665481 5_4:+68823526 None:intergenic
CTTACTCCTACAGATATGGA+AGG 0.668628 5_4:-68818965 Msa0866800:intron
TGCAGTGTGACAACTTGTAG+TGG 0.671946 5_4:-68819988 Msa0866800:CDS
ACAGACCAAAACCAAAACCA+AGG 0.673161 5_4:-68824138 Msa0866800:five_prime_UTR
GTTGCAGATGAGATTGACAT+GGG 0.725180 5_4:-68819285 Msa0866800:intron
GTGCATGACATACCTTGACA+GGG 0.763616 5_4:+68823509 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTAATTAATATTTTGG+GGG + chr5_4:68817186-68817205 None:intergenic 10.0%
!!! CAAATTTAATTAATATTTTG+GGG + chr5_4:68817187-68817206 None:intergenic 10.0%
!!! GCAAATTTAATTAATATTTT+GGG + chr5_4:68817188-68817207 None:intergenic 10.0%
!!! AGCAAATTTAATTAATATTT+TGG + chr5_4:68817189-68817208 None:intergenic 10.0%
!!! TTTTTTTTCTTTTATTTTGT+TGG - chr5_4:68817251-68817270 Msa0866800:intron 10.0%
!! ATAATATTTATGTATATTGA+AGG + chr5_4:68817321-68817340 None:intergenic 10.0%
!! TTAGTAAAAAAAATTAAACT+CGG - chr5_4:68817390-68817409 Msa0866800:CDS 10.0%
!! TATCATTTCATTAATAATAA+TGG - chr5_4:68819434-68819453 Msa0866800:intron 10.0%
!! TCTAATAATTATAAAATGAT+TGG - chr5_4:68820789-68820808 Msa0866800:intron 10.0%
!!! TGATTTTTTCAAATTATTAA+CGG + chr5_4:68823230-68823249 None:intergenic 10.0%
!! AGATTATAGAATTTGAATTA+AGG + chr5_4:68816033-68816052 None:intergenic 15.0%
!! ATTAATTAACATTATAGCAA+TGG + chr5_4:68816456-68816475 None:intergenic 15.0%
!!! GTTCTTTATTTCTAAATAAA+CGG - chr5_4:68816684-68816703 Msa0866800:intron 15.0%
!!! TTCTTTATTTCTAAATAAAC+GGG - chr5_4:68816685-68816704 Msa0866800:intron 15.0%
!! TATAATTCCAAGAAAATAAA+TGG - chr5_4:68816898-68816917 Msa0866800:intron 15.0%
!!! AATTTAATTAATATTTTGGG+GGG + chr5_4:68817185-68817204 None:intergenic 15.0%
!! TACTAAATATAAGAATGTTA+AGG + chr5_4:68817376-68817395 None:intergenic 15.0%
!! TAGTAAAAAAAATTAAACTC+GGG - chr5_4:68817391-68817410 Msa0866800:CDS 15.0%
!! ATTTCAGCATTTAATTAAAT+AGG + chr5_4:68817485-68817504 None:intergenic 15.0%
!! ATAAAAAATTAAGGCTTAAA+TGG + chr5_4:68818282-68818301 None:intergenic 15.0%
!! TTTATAAATTTAAATTCCAC+AGG + chr5_4:68818655-68818674 None:intergenic 15.0%
!!! AAACTTTTTAAATTATCTCA+TGG + chr5_4:68818753-68818772 None:intergenic 15.0%
!!! ACTTATTTTTGAATAGAAAA+TGG - chr5_4:68818878-68818897 Msa0866800:intron 15.0%
!!! CTTATTTTTGAATAGAAAAT+GGG - chr5_4:68818879-68818898 Msa0866800:intron 15.0%
!! TGTTATTAAATTCATAATCA+GGG + chr5_4:68819161-68819180 None:intergenic 15.0%
!! ATGTTATTAAATTCATAATC+AGG + chr5_4:68819162-68819181 None:intergenic 15.0%
!! ACTAATCACATTATTTATTA+TGG + chr5_4:68819480-68819499 None:intergenic 15.0%
!!! AATAAATAATGTGATTAGTT+AGG - chr5_4:68819481-68819500 Msa0866800:intron 15.0%
!!! ATAAATAATGTGATTAGTTA+GGG - chr5_4:68819482-68819501 Msa0866800:intron 15.0%
!! GAAAAATAAAATTATATCAG+TGG - chr5_4:68819622-68819641 Msa0866800:intron 15.0%
!!! GACTAACTAATATTTTTATA+GGG + chr5_4:68820513-68820532 None:intergenic 15.0%
!!! AGACTAACTAATATTTTTAT+AGG + chr5_4:68820514-68820533 None:intergenic 15.0%
!! ATTTCAAATTAAATAAGCTT+TGG - chr5_4:68821530-68821549 Msa0866800:intron 15.0%
!! ATTTAAGCAAATGAAAATAA+TGG - chr5_4:68821636-68821655 Msa0866800:intron 15.0%
!!! TAACAATATTTTAAAGACAA+AGG + chr5_4:68822633-68822652 None:intergenic 15.0%
!! AAAAAAATCATAAGCATAAA+TGG + chr5_4:68823501-68823520 None:intergenic 15.0%
!!! AACAAGATTTTATTGATTAT+AGG + chr5_4:68824055-68824074 None:intergenic 15.0%
!! ATCATCATTACTATAAGAAA+AGG - chr5_4:68815918-68815937 Msa0866800:three_prime_UTR 20.0%
!!! TCTTTATTTCTAAATAAACG+GGG - chr5_4:68816686-68816705 Msa0866800:intron 20.0%
!! TTGTTTGGCAAATTATTAAT+TGG - chr5_4:68816795-68816814 Msa0866800:intron 20.0%
!! AAATATCAATAAACATCCAA+AGG + chr5_4:68816872-68816891 None:intergenic 20.0%
!!! TAACTTTCCATTTATTTTCT+TGG + chr5_4:68816908-68816927 None:intergenic 20.0%
!! GCATAATATATATAAAGTCT+GGG + chr5_4:68817084-68817103 None:intergenic 20.0%
!! TGCATAATATATATAAAGTC+TGG + chr5_4:68817085-68817104 None:intergenic 20.0%
!! AGTAAAAAAAATTAAACTCG+GGG - chr5_4:68817392-68817411 Msa0866800:CDS 20.0%
!! CTACTAAATTAGCATTTAAT+TGG - chr5_4:68817543-68817562 Msa0866800:intron 20.0%
!! ATGTTAAATATAACTGACAA+TGG + chr5_4:68817778-68817797 None:intergenic 20.0%
!! TATATTATCAGTTATTCAGT+TGG - chr5_4:68817990-68818009 Msa0866800:CDS 20.0%
!! AAACAAAAGATAGTTACATA+TGG - chr5_4:68818146-68818165 Msa0866800:intron 20.0%
!!! TGTGATTTTAGAAATAGTTA+TGG + chr5_4:68818783-68818802 None:intergenic 20.0%
!!! TCTAAAATCACATTTACAAT+TGG - chr5_4:68818791-68818810 Msa0866800:intron 20.0%
!!! GTTTATTTTTTATGTAGTGT+CGG + chr5_4:68818860-68818879 None:intergenic 20.0%
!! AGATATAGTAGATTTACATA+TGG + chr5_4:68819826-68819845 None:intergenic 20.0%
!! CTGATTAATAACTAAAATGT+AGG - chr5_4:68820013-68820032 Msa0866800:CDS 20.0%
!! TCAAAATCCATTATATATTG+CGG + chr5_4:68820370-68820389 None:intergenic 20.0%
!! AAATTAAACTCTTTCATGTT+CGG + chr5_4:68820558-68820577 None:intergenic 20.0%
!! AACAAATACTTATATGAACA+TGG + chr5_4:68820948-68820967 None:intergenic 20.0%
!!! TTTTTCCATCTTAAATTGAT+AGG - chr5_4:68821018-68821037 Msa0866800:intron 20.0%
!!! TTTGCTTAAATTTTTGTGTT+CGG + chr5_4:68821627-68821646 None:intergenic 20.0%
!!! TAGTTCAGTTTTTAAAACAT+TGG + chr5_4:68822461-68822480 None:intergenic 20.0%
!! ATTCCTATAAAAGATCAAAA+GGG - chr5_4:68822945-68822964 Msa0866800:intron 20.0%
!!! ATAATGATTGTTCTAAATTG+TGG - chr5_4:68823092-68823111 Msa0866800:intron 20.0%
!! ATAGACATAAATCTAAATTG+CGG + chr5_4:68823422-68823441 None:intergenic 20.0%
!! ATATGATAAATTACAAAGCA+AGG + chr5_4:68823692-68823711 None:intergenic 20.0%
!! ATAGATATACTAAAATGCAA+AGG - chr5_4:68823903-68823922 Msa0866800:CDS 20.0%
! TAGTAATGATGATAACTCTT+AGG + chr5_4:68815911-68815930 None:intergenic 25.0%
! TTTCCATTCATATTCATTCA+TGG - chr5_4:68816056-68816075 Msa0866800:three_prime_UTR 25.0%
! ATTCCATGAATGAATATGAA+TGG + chr5_4:68816062-68816081 None:intergenic 25.0%
!!! CTGATAATGCAGTAAAATTT+TGG + chr5_4:68816209-68816228 None:intergenic 25.0%
!! TTACTGCATTATCAGATTTT+AGG - chr5_4:68816214-68816233 Msa0866800:three_prime_UTR 25.0%
!! CTGATATTCAGTTTAAGATA+AGG + chr5_4:68816282-68816301 None:intergenic 25.0%
! AAATTCTAAATTGTTGGATG+AGG - chr5_4:68816305-68816324 Msa0866800:CDS 25.0%
! TATTCTTACTTGGAATTTGA+AGG + chr5_4:68816399-68816418 None:intergenic 25.0%
! TCCAAGTAAGAATATTACAT+TGG - chr5_4:68816405-68816424 Msa0866800:intron 25.0%
! ACCAATGTAATATTCTTACT+TGG + chr5_4:68816409-68816428 None:intergenic 25.0%
! GAGTTCTATTATTTACAAAC+TGG - chr5_4:68816533-68816552 Msa0866800:CDS 25.0%
!!! CTTTATTTCTAAATAAACGG+GGG - chr5_4:68816687-68816706 Msa0866800:intron 25.0%
!!! TATATTACTACTAGCTTGTT+TGG - chr5_4:68816780-68816799 Msa0866800:intron 25.0%
!! TCCATCATTTTATATTGTCA+AGG - chr5_4:68816930-68816949 Msa0866800:intron 25.0%
!! CCATCATTTTATATTGTCAA+GGG - chr5_4:68816931-68816950 Msa0866800:intron 25.0%
! TATGAAAACAATAGTTGTGT+TGG - chr5_4:68817338-68817357 Msa0866800:CDS 25.0%
! TAGTAGCATGAATGAATTAT+GGG + chr5_4:68817529-68817548 None:intergenic 25.0%
! TTAGTAGCATGAATGAATTA+TGG + chr5_4:68817530-68817549 None:intergenic 25.0%
! AAATATAACTGACAATGGAT+TGG + chr5_4:68817773-68817792 None:intergenic 25.0%
! AAGTTATGTAGCTAATGATA+CGG + chr5_4:68817833-68817852 None:intergenic 25.0%
! GATAGAGTTTAAACTTCAAA+AGG + chr5_4:68817865-68817884 None:intergenic 25.0%
!!! TCTTTTGTTTATGCAATAAG+AGG + chr5_4:68818136-68818155 None:intergenic 25.0%
!!! TCAAGAGAGCATATTTTTTT+TGG + chr5_4:68818513-68818532 None:intergenic 25.0%
!!! ACATTGTTTTGATCTCAATT+TGG + chr5_4:68818573-68818592 None:intergenic 25.0%
! GAATATCATGATAGAGAATT+GGG + chr5_4:68818942-68818961 None:intergenic 25.0%
! AGAATATCATGATAGAGAAT+TGG + chr5_4:68818943-68818962 None:intergenic 25.0%
! TTTGTCTTGATTATACTACT+TGG + chr5_4:68819103-68819122 None:intergenic 25.0%
! TATAATCAAGACAAACCAAA+GGG - chr5_4:68819108-68819127 Msa0866800:intron 25.0%
! TAAGCTTCGTATTCAATTTA+AGG + chr5_4:68819206-68819225 None:intergenic 25.0%
! AAATTGAATACGAAGCTTAA+AGG - chr5_4:68819207-68819226 Msa0866800:CDS 25.0%
!!! ATAATGGATTCAATACAACT+TGG - chr5_4:68819450-68819469 Msa0866800:intron 25.0%
!!! TAATGGATTCAATACAACTT+GGG - chr5_4:68819451-68819470 Msa0866800:intron 25.0%
! ATGCAATTGCTCTATTTATA+AGG + chr5_4:68819705-68819724 None:intergenic 25.0%
! TATTGAAGTTTGAAGGATTT+GGG + chr5_4:68819780-68819799 None:intergenic 25.0%
! ATAGTAGATTTACATATGGT+TGG + chr5_4:68819822-68819841 None:intergenic 25.0%
! ATCATTTATTACGATATGCA+GGG - chr5_4:68820311-68820330 Msa0866800:intron 25.0%
!!! ATATGCAGGGTTTTAAATAA+AGG - chr5_4:68820324-68820343 Msa0866800:intron 25.0%
! TACTGAAAACTTTGATATTG+CGG - chr5_4:68821188-68821207 Msa0866800:intron 25.0%
!!! ATTTGATTTTGTTCCAATGA+TGG - chr5_4:68821359-68821378 Msa0866800:intron 25.0%
!! ATTGGAAAGTATGTTTCATA+CGG + chr5_4:68822145-68822164 None:intergenic 25.0%
!! TTTTTGTATTGCAGTATAAC+TGG - chr5_4:68822347-68822366 Msa0866800:intron 25.0%
!! TTACTACAATTCCGTTATTT+TGG + chr5_4:68822565-68822584 None:intergenic 25.0%
!! AAATAACGGAATTGTAGTAA+AGG - chr5_4:68822565-68822584 Msa0866800:intron 25.0%
! GTTTCAAATTAATCTTGAAC+TGG + chr5_4:68822591-68822610 None:intergenic 25.0%
!! ATAAGTTAGCTTCTTATACA+AGG + chr5_4:68822828-68822847 None:intergenic 25.0%
!! CTTTTGATCTTTTATAGGAA+TGG + chr5_4:68822946-68822965 None:intergenic 25.0%
! CATTCCTATAAAAGATCAAA+AGG - chr5_4:68822944-68822963 Msa0866800:intron 25.0%
! ATTGTTTGAGAATTTGTCTA+AGG + chr5_4:68823039-68823058 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG - chr5_4:68823255-68823274 Msa0866800:intron 25.0%
! AATCATAATTACGTCTTTGT+CGG + chr5_4:68823339-68823358 None:intergenic 25.0%
!! AGAAAGTATAAAAAGAGTGA+AGG + chr5_4:68823452-68823471 None:intergenic 25.0%
! TAGAAATGATTTAAGCTTAG+AGG - chr5_4:68823622-68823641 Msa0866800:intron 25.0%
!! GAATGATAATTTTATGAGGT+TGG + chr5_4:68823670-68823689 None:intergenic 25.0%
!! CAAGGAATGATAATTTTATG+AGG + chr5_4:68823674-68823693 None:intergenic 25.0%
! CTGATTATGACAAGAAATAA+GGG + chr5_4:68824090-68824109 None:intergenic 25.0%
!!! TTTTGTGTGATTGGTTTGAA+AGG + chr5_4:68815998-68816017 None:intergenic 30.0%
! AACAAAGGTTTTTGTGTGAT+TGG + chr5_4:68816007-68816026 None:intergenic 30.0%
ATCACACAAAAACCTTTGTT+TGG - chr5_4:68816007-68816026 Msa0866800:three_prime_UTR 30.0%
TTTGAATTAAGGCCAAACAA+AGG + chr5_4:68816022-68816041 None:intergenic 30.0%
ATTCATGGAATCCTCAAATT+GGG - chr5_4:68816071-68816090 Msa0866800:three_prime_UTR 30.0%
ATTTAGTGTGTTTAACCGTA+AGG + chr5_4:68816179-68816198 None:intergenic 30.0%
!! TGCAGTAAAATTTTGGTGTA+AGG + chr5_4:68816202-68816221 None:intergenic 30.0%
CAGCTCAAATTCTAAATTGT+TGG - chr5_4:68816299-68816318 Msa0866800:exon 30.0%
!! TCCCTTTGAGATTAATGATA+TGG - chr5_4:68816661-68816680 Msa0866800:intron 30.0%
CCCATATCATTAATCTCAAA+GGG + chr5_4:68816665-68816684 None:intergenic 30.0%
!! CCCTTTGAGATTAATGATAT+GGG - chr5_4:68816662-68816681 Msa0866800:intron 30.0%
ACCCATATCATTAATCTCAA+AGG + chr5_4:68816666-68816685 None:intergenic 30.0%
ACGGGGGAAAATTAATAAAA+AGG - chr5_4:68816703-68816722 Msa0866800:intron 30.0%
CGGGGGAAAATTAATAAAAA+GGG - chr5_4:68816704-68816723 Msa0866800:intron 30.0%
TTAATAAAAAGGGAACAACG+AGG - chr5_4:68816714-68816733 Msa0866800:intron 30.0%
CCCTTGACAATATAAAATGA+TGG + chr5_4:68816934-68816953 None:intergenic 30.0%
!!! GAATGGTCTGTTTTTTTTGT+CGG - chr5_4:68817049-68817068 Msa0866800:intron 30.0%
AAAAAAAATTAAACTCGGGG+AGG - chr5_4:68817395-68817414 Msa0866800:CDS 30.0%
ATTAGCATTTAATTGGTCGT+TGG - chr5_4:68817550-68817569 Msa0866800:intron 30.0%
TGTATGAAGATATAGCTATG+TGG + chr5_4:68817578-68817597 None:intergenic 30.0%
!! AGAGTATTGCTTATCATCAA+AGG - chr5_4:68817632-68817651 Msa0866800:intron 30.0%
ATCATCAAAGGATTTAAACG+TGG - chr5_4:68817644-68817663 Msa0866800:intron 30.0%
TATACCGTGTGAATCTTAAT+CGG + chr5_4:68817890-68817909 None:intergenic 30.0%
AATTATTTGAACCAGATGTG+TGG + chr5_4:68818112-68818131 None:intergenic 30.0%
CCTTAACCAAAACATCTTAT+AGG + chr5_4:68818607-68818626 None:intergenic 30.0%
!!! CCTATAAGATGTTTTGGTTA+AGG - chr5_4:68818604-68818623 Msa0866800:CDS 30.0%
!!! ATAAGATGTTTTGGTTAAGG+TGG - chr5_4:68818607-68818626 Msa0866800:CDS 30.0%
!! TTTTGGTTAAGGTGGAATAA+AGG - chr5_4:68818615-68818634 Msa0866800:CDS 30.0%
TTTAAATTCCACAGGCAAAT+AGG + chr5_4:68818647-68818666 None:intergenic 30.0%
GTATAATCAAGACAAACCAA+AGG - chr5_4:68819107-68819126 Msa0866800:intron 30.0%
AAGCTTAAAGGTAAGTAAAC+TGG - chr5_4:68819219-68819238 Msa0866800:CDS 30.0%
! AATGTGATTAGTTAGGGAAA+TGG - chr5_4:68819488-68819507 Msa0866800:intron 30.0%
TATTAGGCGACAAATGAATT+CGG + chr5_4:68819538-68819557 None:intergenic 30.0%
GGTCTAGAAGATTAATTACT+TGG - chr5_4:68819643-68819662 Msa0866800:intron 30.0%
AGATTAATTACTTGGCTAGT+CGG - chr5_4:68819651-68819670 Msa0866800:intron 30.0%
ATTGAAGTTTGAAGGATTTG+GGG + chr5_4:68819779-68819798 None:intergenic 30.0%
CTATTGAAGTTTGAAGGATT+TGG + chr5_4:68819781-68819800 None:intergenic 30.0%
CACATACTATTGAAGTTTGA+AGG + chr5_4:68819787-68819806 None:intergenic 30.0%
TTCAATAGTATGTGCTAATG+TGG - chr5_4:68819793-68819812 Msa0866800:intron 30.0%
!!! TTTTTCAAGGTGAATAAGTG+AGG + chr5_4:68819932-68819951 None:intergenic 30.0%
!!! GCTAGAATTCACTTTTTTCA+AGG + chr5_4:68819945-68819964 None:intergenic 30.0%
!!! TTTTTTGTCAGATTGCATAG+TGG + chr5_4:68819967-68819986 None:intergenic 30.0%
AATGCAAGAAAGAACAGAAT+GGG - chr5_4:68820084-68820103 Msa0866800:intron 30.0%
! TTAGGATTAGCAAAACTCAA+AGG + chr5_4:68820233-68820252 None:intergenic 30.0%
CTGCATATCGTAATAAATGA+TGG + chr5_4:68820312-68820331 None:intergenic 30.0%
CATCATTTATTACGATATGC+AGG - chr5_4:68820310-68820329 Msa0866800:intron 30.0%
! TTAGATTATGTGATGATGAG+CGG + chr5_4:68820774-68820793 None:intergenic 30.0%
!! CTGTTTTTCCATTTGCATAT+TGG + chr5_4:68820867-68820886 None:intergenic 30.0%
CTGAACCTATCAATTTAAGA+TGG + chr5_4:68821026-68821045 None:intergenic 30.0%
! ATTCATTTCCTTTGGTGATA+TGG - chr5_4:68821456-68821475 Msa0866800:intron 30.0%
! TTCATTTCCTTTGGTGATAT+GGG - chr5_4:68821457-68821476 Msa0866800:intron 30.0%
! ACATCTTCAATTTGAAGTGT+CGG - chr5_4:68821719-68821738 Msa0866800:intron 30.0%
CTGTTCAAATTCAATCAAGA+TGG + chr5_4:68821764-68821783 None:intergenic 30.0%
AAACACTGAGTTTACATTGT+TGG + chr5_4:68821833-68821852 None:intergenic 30.0%
! TTTTACCTGCTCAGAATTTT+CGG + chr5_4:68822254-68822273 None:intergenic 30.0%
TTAATAGACAACATACTCCT+TGG - chr5_4:68822392-68822411 Msa0866800:intron 30.0%
AAAGACAAAGGAAAACTAGA+TGG + chr5_4:68822621-68822640 None:intergenic 30.0%
TTTAGATGATAATCCGTTGT+TGG + chr5_4:68822718-68822737 None:intergenic 30.0%
TCAGAAATTTATTAACGCTG+TGG - chr5_4:68822740-68822759 Msa0866800:intron 30.0%
! ACTCCCTTTTGATCTTTTAT+AGG + chr5_4:68822951-68822970 None:intergenic 30.0%
CATCTCAAACCTTTATATTG+CGG - chr5_4:68823377-68823396 Msa0866800:intron 30.0%
GTATGAATGTTATGTTGCAT+TGG - chr5_4:68823537-68823556 Msa0866800:CDS 30.0%
TTGAAAAGGATTTCTGAGTT+TGG - chr5_4:68823578-68823597 Msa0866800:CDS 30.0%
ATCAGATACAAGAGAAGTTA+AGG - chr5_4:68823774-68823793 Msa0866800:CDS 30.0%
AGAAACAAACGTAGAATTGT+AGG - chr5_4:68823842-68823861 Msa0866800:CDS 30.0%
CCTGATTATGACAAGAAATA+AGG + chr5_4:68824091-68824110 None:intergenic 30.0%
! CCTTATTTCTTGTCATAATC+AGG - chr5_4:68824088-68824107 Msa0866800:five_prime_UTR 30.0%
GGTTTGAAAGGAAGAAAATG+TGG + chr5_4:68815986-68816005 None:intergenic 35.0%
CATTCATGGAATCCTCAAAT+TGG - chr5_4:68816070-68816089 Msa0866800:three_prime_UTR 35.0%
ATGTTTGAGAACCCAATTTG+AGG + chr5_4:68816085-68816104 None:intergenic 35.0%
TAGACATTGAAGGGCTAATA+AGG + chr5_4:68816131-68816150 None:intergenic 35.0%
GGAAAGTTGTAGACATTGAA+GGG + chr5_4:68816140-68816159 None:intergenic 35.0%
ACGAGGATTTGTGATATTGA+TGG - chr5_4:68816731-68816750 Msa0866800:intron 35.0%
!! GATGGTTTCTAGTAATAGCA+TGG - chr5_4:68816749-68816768 Msa0866800:intron 35.0%
GAAGATAAGGTGGTTGAAAA+TGG + chr5_4:68816829-68816848 None:intergenic 35.0%
AATTATCCTCGAAGATAAGG+TGG + chr5_4:68816839-68816858 None:intergenic 35.0%
CAATAAACATCCAAAGGTTG+TGG + chr5_4:68816866-68816885 None:intergenic 35.0%
AAAACAGACCATTCCATTTG+AGG + chr5_4:68817043-68817062 None:intergenic 35.0%
!! ATATTTTGGGGGGTTTTCAT+CGG + chr5_4:68817175-68817194 None:intergenic 35.0%
GTATATTGAAGGTGACAACT+TGG + chr5_4:68817310-68817329 None:intergenic 35.0%
AAGCAATACTCTCAATCACA+AGG + chr5_4:68817624-68817643 None:intergenic 35.0%
TTTAAACGTGGACCATTCAA+AGG - chr5_4:68817656-68817675 Msa0866800:intron 35.0%
CCACGTTTAAATCCTTTGAA+TGG + chr5_4:68817671-68817690 None:intergenic 35.0%
CCATTCAAAGGATTTAAACG+TGG - chr5_4:68817668-68817687 Msa0866800:intron 35.0%
TCAACCGATTAAGATTCACA+CGG - chr5_4:68817883-68817902 Msa0866800:CDS 35.0%
ACATGTCTTTATCAATGCAG+TGG - chr5_4:68818061-68818080 Msa0866800:intron 35.0%
CATGTCTTTATCAATGCAGT+GGG - chr5_4:68818062-68818081 Msa0866800:intron 35.0%
ATGTCTTTATCAATGCAGTG+GGG - chr5_4:68818063-68818082 Msa0866800:intron 35.0%
!! CTGTATGATTTTGACGTGTT+GGG + chr5_4:68818205-68818224 None:intergenic 35.0%
!! TCTGTATGATTTTGACGTGT+TGG + chr5_4:68818206-68818225 None:intergenic 35.0%
GATATAGTACCTGTCATAGT+AGG - chr5_4:68818471-68818490 Msa0866800:intron 35.0%
GAGATCAAAACAATGTTTCG+TGG - chr5_4:68818577-68818596 Msa0866800:intron 35.0%
! GGCATTCCTATAAGATGTTT+TGG - chr5_4:68818598-68818617 Msa0866800:intron 35.0%
! TGTCCTCTTTTATCTCTTTG+CGG + chr5_4:68819032-68819051 None:intergenic 35.0%
CATGAAGAAAACTACGACTT+CGG - chr5_4:68819250-68819269 Msa0866800:CDS 35.0%
! TACTTCTTTTCCTAACTCCT+GGG + chr5_4:68819568-68819587 None:intergenic 35.0%
GACATGCATTGTTATATGCT+GGG - chr5_4:68819884-68819903 Msa0866800:CDS 35.0%
ACATGCATTGTTATATGCTG+GGG - chr5_4:68819885-68819904 Msa0866800:CDS 35.0%
! TTTTTGCAGCTCATGTAATC+TGG + chr5_4:68820059-68820078 None:intergenic 35.0%
GAATGCAAGAAAGAACAGAA+TGG - chr5_4:68820083-68820102 Msa0866800:intron 35.0%
ATAGAGTTTGTGTTCTTCAC+TGG - chr5_4:68820170-68820189 Msa0866800:intron 35.0%
ATTAGCAAAACTCAAAGGAG+TGG + chr5_4:68820228-68820247 None:intergenic 35.0%
! AATCCTAAGAAGCCACTTTA+TGG - chr5_4:68820245-68820264 Msa0866800:intron 35.0%
CTTGAGATATGTCCATAAAG+TGG + chr5_4:68820260-68820279 None:intergenic 35.0%
!!! GGGTTTTAAATAAAGGTTCG+CGG - chr5_4:68820331-68820350 Msa0866800:intron 35.0%
AGAGAATTACGGTCAAATGT+GGG + chr5_4:68820435-68820454 None:intergenic 35.0%
!!! AGGGTTTTAAATAGAGATCG+CGG + chr5_4:68820494-68820513 None:intergenic 35.0%
TAAACTCTTTCATGTTCGGT+TGG + chr5_4:68820554-68820573 None:intergenic 35.0%
GATTTGTGATTTCGAAACAG+TGG + chr5_4:68820607-68820626 None:intergenic 35.0%
!! TTTGCATATTGGATTTGCTG+AGG + chr5_4:68820856-68820875 None:intergenic 35.0%
CAGCAAATCCAATATGCAAA+TGG - chr5_4:68820856-68820875 Msa0866800:intron 35.0%
TTCATACCTTCCATATCTGT+AGG + chr5_4:68821142-68821161 None:intergenic 35.0%
GAGCTCAAATTCATTTCCTT+TGG - chr5_4:68821448-68821467 Msa0866800:intron 35.0%
TTCAGAAGAACACTACATTC+AGG - chr5_4:68821498-68821517 Msa0866800:intron 35.0%
ACGCATTAAGAAATGACTAG+TGG - chr5_4:68821575-68821594 Msa0866800:intron 35.0%
TTGATTGAATTTGAACAGCC+TGG - chr5_4:68821766-68821785 Msa0866800:intron 35.0%
GTAAACTCAGTGTTTCACAT+TGG - chr5_4:68821838-68821857 Msa0866800:intron 35.0%
!!! AACTGGTTTTCTAGCAGAAT+GGG - chr5_4:68821876-68821895 Msa0866800:intron 35.0%
TTGAAGCTACTGGACTAATA+AGG + chr5_4:68821915-68821934 None:intergenic 35.0%
TATGAAACTCTTGAAGCTAC+TGG + chr5_4:68821925-68821944 None:intergenic 35.0%
GTTTCATACATGACAGCAAT+CGG - chr5_4:68821937-68821956 Msa0866800:intron 35.0%
TTTCATACATGACAGCAATC+GGG - chr5_4:68821938-68821957 Msa0866800:intron 35.0%
!! TTCAGAGATTATGTCGATTC+TGG - chr5_4:68822076-68822095 Msa0866800:intron 35.0%
TAATATCAACCGAACATGAC+TGG - chr5_4:68822227-68822246 Msa0866800:intron 35.0%
GCAGTATAACTGGATGAAAA+AGG - chr5_4:68822357-68822376 Msa0866800:intron 35.0%
TAACTGGATGAAAAAGGACA+TGG - chr5_4:68822363-68822382 Msa0866800:intron 35.0%
!!! CTACAATTCCGTTATTTTGG+CGG + chr5_4:68822562-68822581 None:intergenic 35.0%
GTACATTGTGAACATGAAAC+AGG - chr5_4:68822848-68822867 Msa0866800:intron 35.0%
TTCTCTCATAGTTATGCACA+TGG + chr5_4:68822893-68822912 None:intergenic 35.0%
! ATAGAAAAGAGTGCGATGAA+AGG + chr5_4:68823074-68823093 None:intergenic 35.0%
TTCATATTATACCCCTACCT+AGG - chr5_4:68824131-68824150 Msa0866800:five_prime_UTR 35.0%
CTTTAAATAGGCTAGACCAT+AGG + chr5_4:68824187-68824206 None:intergenic 35.0%
ACAGACCAAAACCAAAACCA+AGG - chr5_4:68815960-68815979 Msa0866800:three_prime_UTR 40.0%
!! AGAAAATGTGGCCTTGGTTT+TGG + chr5_4:68815974-68815993 None:intergenic 40.0%
AAAGGAAGAAAATGTGGCCT+TGG + chr5_4:68815980-68815999 None:intergenic 40.0%
GGGAAAGTTGTAGACATTGA+AGG + chr5_4:68816141-68816160 None:intergenic 40.0%
AACTTTCCCTTCCTCAACTT+TGG - chr5_4:68816152-68816171 Msa0866800:three_prime_UTR 40.0%
TAAGGTCCAAAGTTGAGGAA+GGG + chr5_4:68816161-68816180 None:intergenic 40.0%
TTCCTCAACTTTGGACCTTA+CGG - chr5_4:68816161-68816180 Msa0866800:three_prime_UTR 40.0%
TTTCAACCACCTTATCTTCG+AGG - chr5_4:68816830-68816849 Msa0866800:intron 40.0%
GGGAATTATCCTCGAAGATA+AGG + chr5_4:68816842-68816861 None:intergenic 40.0%
ATAATTCCCACCACAACCTT+TGG - chr5_4:68816853-68816872 Msa0866800:intron 40.0%
AAACATCCAAAGGTTGTGGT+GGG + chr5_4:68816862-68816881 None:intergenic 40.0%
TAAACATCCAAAGGTTGTGG+TGG + chr5_4:68816863-68816882 None:intergenic 40.0%
! CATCGTGAATTTAGCTCAGT+TGG + chr5_4:68817117-68817136 None:intergenic 40.0%
TGCAAACCGTTCAATGAAAC+TGG + chr5_4:68817695-68817714 None:intergenic 40.0%
!! AATGGATTGGTTCAGATGGA+GGG + chr5_4:68817733-68817752 None:intergenic 40.0%
!! AAATGGATTGGTTCAGATGG+AGG + chr5_4:68817734-68817753 None:intergenic 40.0%
!! TCGAAATGGATTGGTTCAGA+TGG + chr5_4:68817737-68817756 None:intergenic 40.0%
!! AATGGATTGGTTCAGATGGA+GGG + chr5_4:68817733-68817752 None:intergenic 40.0%
!! TGACAATGGATTGGTTCAGA+TGG + chr5_4:68817764-68817783 None:intergenic 40.0%
AGATTCACACGGTATATGCA+TGG - chr5_4:68817894-68817913 Msa0866800:CDS 40.0%
! CAGCTCTATGGATTTGAGAT+TGG + chr5_4:68818016-68818035 None:intergenic 40.0%
ACCAGATGTGTGGATATTGA+GGG + chr5_4:68818102-68818121 None:intergenic 40.0%
AACCAGATGTGTGGATATTG+AGG + chr5_4:68818103-68818122 None:intergenic 40.0%
! GTGCTATTGAGATCGTAATG+AGG + chr5_4:68818257-68818276 None:intergenic 40.0%
TACCTGTCATAGTAGGAACA+TGG - chr5_4:68818478-68818497 Msa0866800:intron 40.0%
GGTATATTCCTATTTGCCTG+TGG - chr5_4:68818636-68818655 Msa0866800:CDS 40.0%
CTTTGCGGCACTTATGTTAT+GGG + chr5_4:68819017-68819036 None:intergenic 40.0%
TCTTTGCGGCACTTATGTTA+TGG + chr5_4:68819018-68819037 None:intergenic 40.0%
ATCAAGACAAACCAAAGGGT+TGG - chr5_4:68819112-68819131 Msa0866800:intron 40.0%
ACTCCTGGGTAGTGTTTATT+AGG + chr5_4:68819554-68819573 None:intergenic 40.0%
ATAAACACTACCCAGGAGTT+AGG - chr5_4:68819555-68819574 Msa0866800:intron 40.0%
! CTACTTCTTTTCCTAACTCC+TGG + chr5_4:68819569-68819588 None:intergenic 40.0%
GAAGGATTTGGGGAATCATA+AGG + chr5_4:68819769-68819788 None:intergenic 40.0%
TACCAACAGAGCTATACTCA+CGG + chr5_4:68819862-68819881 None:intergenic 40.0%
! TGAGTATAGCTCTGTTGGTA+GGG - chr5_4:68819862-68819881 Msa0866800:CDS 40.0%
GGACATGCATTGTTATATGC+TGG - chr5_4:68819883-68819902 Msa0866800:CDS 40.0%
TGTCCATAAAGTGGCTTCTT+AGG + chr5_4:68820251-68820270 None:intergenic 40.0%
ACTTGGGCCGCAATATATAA+TGG - chr5_4:68820360-68820379 Msa0866800:intron 40.0%
CAGAGAATTACGGTCAAATG+TGG + chr5_4:68820436-68820455 None:intergenic 40.0%
CCTTAGACTGCAGAGAATTA+CGG + chr5_4:68820446-68820465 None:intergenic 40.0%
CGTAATTCTCTGCAGTCTAA+GGG - chr5_4:68820444-68820463 Msa0866800:intron 40.0%
!! ATGATGAGCGGTTGTTTTGT+CGG + chr5_4:68820762-68820781 None:intergenic 40.0%
TGTTGCAGATGAGATTGACA+TGG - chr5_4:68820812-68820831 Msa0866800:intron 40.0%
GTTGCAGATGAGATTGACAT+GGG - chr5_4:68820813-68820832 Msa0866800:intron 40.0%
!! ATGAGATTGACATGGGTTAG+TGG - chr5_4:68820820-68820839 Msa0866800:intron 40.0%
!! TGAGATTGACATGGGTTAGT+GGG - chr5_4:68820821-68820840 Msa0866800:intron 40.0%
ATCATGCCATCCAAAATCCT+TGG + chr5_4:68821064-68821083 None:intergenic 40.0%
ATCCATTCAGCACTTATGAC+AGG - chr5_4:68821093-68821112 Msa0866800:intron 40.0%
AGTGCTTACTCCTACAGATA+TGG - chr5_4:68821129-68821148 Msa0866800:intron 40.0%
CTTACTCCTACAGATATGGA+AGG - chr5_4:68821133-68821152 Msa0866800:intron 40.0%
TCTAAATTGCGGTCTCTAAC+TGG + chr5_4:68821233-68821252 None:intergenic 40.0%
! AGACCGCAATTTAGAACCAT+GGG - chr5_4:68821238-68821257 Msa0866800:intron 40.0%
CCAATGATGGTCTAGTAACT+CGG - chr5_4:68821372-68821391 Msa0866800:intron 40.0%
AGCTGGTGGAGTTGAAAATT+TGG + chr5_4:68821416-68821435 None:intergenic 40.0%
! AAATTTTCAACTCCACCAGC+TGG - chr5_4:68821415-68821434 Msa0866800:intron 40.0%
! GGTTTTTCCCATATCACCAA+AGG + chr5_4:68821467-68821486 None:intergenic 40.0%
!! TTCTTCTGAAGCATCAAGAG+GGG + chr5_4:68821488-68821507 None:intergenic 40.0%
!! GTTCTTCTGAAGCATCAAGA+GGG + chr5_4:68821489-68821508 None:intergenic 40.0%
!! TGTTCTTCTGAAGCATCAAG+AGG + chr5_4:68821490-68821509 None:intergenic 40.0%
GGAGACATAAGTTATGCAAC+TGG - chr5_4:68821859-68821878 Msa0866800:intron 40.0%
!!! CAACTGGTTTTCTAGCAGAA+TGG - chr5_4:68821875-68821894 Msa0866800:intron 40.0%
GTTTATGTTACTCCTGACTC+TGG - chr5_4:68822103-68822122 Msa0866800:intron 40.0%
! CCTTGTTCAATAGAGTACCA+AGG + chr5_4:68822190-68822209 None:intergenic 40.0%
CCTTGGTACTCTATTGAACA+AGG - chr5_4:68822187-68822206 Msa0866800:intron 40.0%
! ATTTTCGGACCAGTCATGTT+CGG + chr5_4:68822239-68822258 None:intergenic 40.0%
!! TACTCCTTGGCTGATTTTCA+TGG - chr5_4:68822405-68822424 Msa0866800:intron 40.0%
!! ACTCCTTGGCTGATTTTCAT+GGG - chr5_4:68822406-68822425 Msa0866800:intron 40.0%
AACTAGACAACAAACTCGTG+AGG - chr5_4:68822476-68822495 Msa0866800:intron 40.0%
CTACCAAACCGCCAAAATAA+CGG - chr5_4:68822551-68822570 Msa0866800:intron 40.0%
!!! ATTCCGTTATTTTGGCGGTT+TGG + chr5_4:68822557-68822576 None:intergenic 40.0%
CCAATGTACACTTCCAACAA+CGG - chr5_4:68822702-68822721 Msa0866800:intron 40.0%
! GCCATTGCTGTTACAGAATA+AGG - chr5_4:68822764-68822783 Msa0866800:intron 40.0%
! GCCTTATTCTGTAACAGCAA+TGG + chr5_4:68822768-68822787 None:intergenic 40.0%
GAACATCACTCCTTAGAACT+CGG - chr5_4:68822790-68822809 Msa0866800:intron 40.0%
CTCTATGTAACCGAGTTCTA+AGG + chr5_4:68822803-68822822 None:intergenic 40.0%
! GAACATGAAACAGGTTGACT+TGG - chr5_4:68822857-68822876 Msa0866800:intron 40.0%
!!! CAGGTTGACTTGGTTCTTTT+TGG - chr5_4:68822867-68822886 Msa0866800:intron 40.0%
AAATTGTGGTTATAGCGCAG+TGG - chr5_4:68823106-68823125 Msa0866800:intron 40.0%
CAATAGTGGCCGCAATATAA+AGG + chr5_4:68823389-68823408 None:intergenic 40.0%
! GAATGTTATGTTGCATTGGC+AGG - chr5_4:68823541-68823560 Msa0866800:CDS 40.0%
GATGTCACAAACTGCAATGA+AGG + chr5_4:68823757-68823776 None:intergenic 40.0%
TATTATACCCCTACCTAGGA+TGG - chr5_4:68824135-68824154 Msa0866800:five_prime_UTR 40.0%
ATTATACCCCTACCTAGGAT+GGG - chr5_4:68824136-68824155 Msa0866800:five_prime_UTR 40.0%
!!! TGTGGCCTTGGTTTTGGTTT+TGG + chr5_4:68815968-68815987 None:intergenic 45.0%
GTAAGGTCCAAAGTTGAGGA+AGG + chr5_4:68816162-68816181 None:intergenic 45.0%
AACCGTAAGGTCCAAAGTTG+AGG + chr5_4:68816166-68816185 None:intergenic 45.0%
GTTGGATGAGGAGTTTGTCA+CGG - chr5_4:68816317-68816336 Msa0866800:CDS 45.0%
GACATACCTTGACAGGGTAA+TGG + chr5_4:68816586-68816605 None:intergenic 45.0%
GTGCATGACATACCTTGACA+GGG + chr5_4:68816592-68816611 None:intergenic 45.0%
TGTGCATGACATACCTTGAC+AGG + chr5_4:68816593-68816612 None:intergenic 45.0%
AGTGTCACACCTACCTCAAA+TGG - chr5_4:68817027-68817046 Msa0866800:intron 45.0%
CACACCTACCTCAAATGGAA+TGG - chr5_4:68817032-68817051 Msa0866800:intron 45.0%
! CAGACCATTCCATTTGAGGT+AGG + chr5_4:68817039-68817058 None:intergenic 45.0%
CGTGGTCCAGTTTCATTGAA+CGG - chr5_4:68817686-68817705 Msa0866800:intron 45.0%
GGTTTGCACACCCTAAGATT+CGG - chr5_4:68817707-68817726 Msa0866800:CDS 45.0%
!! CAATGGATTGGTTCAGATGG+AGG + chr5_4:68817761-68817780 None:intergenic 45.0%
CGTCGACATAAACAGCTCTA+TGG + chr5_4:68818028-68818047 None:intergenic 45.0%
TCCCTCAATATCCACACATC+TGG - chr5_4:68818098-68818117 Msa0866800:intron 45.0%
GTCCATGTTCCTACTATGAC+AGG + chr5_4:68818483-68818502 None:intergenic 45.0%
GTGCCGCAAAGAGATAAAAG+AGG - chr5_4:68819026-68819045 Msa0866800:CDS 45.0%
GAGATAACTCTCATGTGTGG+TGG + chr5_4:68819139-68819158 None:intergenic 45.0%
AGGGAGATAACTCTCATGTG+TGG + chr5_4:68819142-68819161 None:intergenic 45.0%
TCGCCTAATAAACACTACCC+AGG - chr5_4:68819548-68819567 Msa0866800:intron 45.0%
! GAAGCATCATCACTGCTTGT+AGG + chr5_4:68819602-68819621 None:intergenic 45.0%
ACCAACAGAGCTATACTCAC+GGG + chr5_4:68819861-68819880 None:intergenic 45.0%
! GTGAGTATAGCTCTGTTGGT+AGG - chr5_4:68819861-68819880 Msa0866800:CDS 45.0%
! GTGAATAAGTGAGGTGTCCA+GGG + chr5_4:68819923-68819942 None:intergenic 45.0%
TGCAGTGTGACAACTTGTAG+TGG - chr5_4:68820110-68820129 Msa0866800:intron 45.0%
GAGTTTGTGTTCTTCACTGG+TGG - chr5_4:68820173-68820192 Msa0866800:intron 45.0%
CCGTAATTCTCTGCAGTCTA+AGG - chr5_4:68820443-68820462 Msa0866800:intron 45.0%
!! GGTTGTTTTGTCGGTATCTG+TGG + chr5_4:68820753-68820772 None:intergenic 45.0%
!! GAGATTGACATGGGTTAGTG+GGG - chr5_4:68820822-68820841 Msa0866800:intron 45.0%
! GATTTTGGATGGCATGATCC+AGG - chr5_4:68821066-68821085 Msa0866800:intron 45.0%
! AGTGCTGAATGGATGAATCC+TGG + chr5_4:68821087-68821106 None:intergenic 45.0%
!! GTCCTGTCATAAGTGCTGAA+TGG + chr5_4:68821098-68821117 None:intergenic 45.0%
CTGTAGGAGTAAGCACTTGA+TGG + chr5_4:68821126-68821145 None:intergenic 45.0%
! GAGACCGCAATTTAGAACCA+TGG - chr5_4:68821237-68821256 Msa0866800:intron 45.0%
!! CTGCCCATGGTTCTAAATTG+CGG + chr5_4:68821244-68821263 None:intergenic 45.0%
CGCATTAAATAGTCTGCCCA+TGG + chr5_4:68821257-68821276 None:intergenic 45.0%
CCGAGTTACTAGACCATCAT+TGG + chr5_4:68821375-68821394 None:intergenic 45.0%
GTCGATGTCAGACACAATAC+TGG + chr5_4:68821678-68821697 None:intergenic 45.0%
! TTGATAACCGATAGTGCTCC+AGG + chr5_4:68821787-68821806 None:intergenic 45.0%
TATGTTACTCCTGACTCTGG+TGG - chr5_4:68822106-68822125 Msa0866800:intron 45.0%
!! CTCCTTGGCTGATTTTCATG+GGG - chr5_4:68822407-68822426 Msa0866800:intron 45.0%
TACCCCATGAAAATCAGCCA+AGG + chr5_4:68822412-68822431 None:intergenic 45.0%
CAACAAACTCGTGAGGTCTA+TGG - chr5_4:68822483-68822502 Msa0866800:intron 45.0%
CCACCTTTAATCGCTTGAAC+CGG - chr5_4:68822518-68822537 Msa0866800:intron 45.0%
GTTCCGGTTCAAGCGATTAA+AGG + chr5_4:68822524-68822543 None:intergenic 45.0%
! GTTTGGTAGCCATTTGGTTC+CGG + chr5_4:68822540-68822559 None:intergenic 45.0%
! CCGTTGTTGGAAGTGTACAT+TGG + chr5_4:68822705-68822724 None:intergenic 45.0%
ATGCCAATGACAGCATGTAC+AGG + chr5_4:68823005-68823024 None:intergenic 45.0%
TGTACATGCTGTCATTGGCA+TGG - chr5_4:68823004-68823023 Msa0866800:intron 45.0%
! GGTTTGAGATGTCTCTGCAA+CGG + chr5_4:68823368-68823387 None:intergenic 45.0%
GCGGTATGCATTTGCAATAG+TGG + chr5_4:68823403-68823422 None:intergenic 45.0%
ACTATTCCCATCCTAGGTAG+GGG + chr5_4:68824145-68824164 None:intergenic 45.0%
GACTATTCCCATCCTAGGTA+GGG + chr5_4:68824146-68824165 None:intergenic 45.0%
!! AAAAATATGATAAAAAATTA+AGG + chr5_4:68818291-68818310 None:intergenic 5.0%
TTTGTCACGGTTACCGTCAC+CGG - chr5_4:68816330-68816349 Msa0866800:CDS 50.0%
ATCTCTCGGTTTCGAAACGC+CGG + chr5_4:68816352-68816371 None:intergenic 50.0%
CGAAACCGAGAGATGGAGAT+TGG - chr5_4:68816358-68816377 Msa0866800:intron 50.0%
ACCGAGAGATGGAGATTGGT+TGG - chr5_4:68816362-68816381 Msa0866800:intron 50.0%
GCCAACCAATCTCCATCTCT+CGG + chr5_4:68816366-68816385 None:intergenic 50.0%
! ACAGGGTAATGGCAAAGCAG+AGG + chr5_4:68816575-68816594 None:intergenic 50.0%
GCTTTGCCATTACCCTGTCA+AGG - chr5_4:68816577-68816596 Msa0866800:intron 50.0%
AGATGGAGGGCCGAATCTTA+GGG + chr5_4:68817720-68817739 None:intergenic 50.0%
GATGGAGGGTCGAAATGGAT+TGG + chr5_4:68817746-68817765 None:intergenic 50.0%
GTTCAGATGGAGGGTCGAAA+TGG + chr5_4:68817751-68817770 None:intergenic 50.0%
TATCAATGCAGTGGGGACTC+TGG - chr5_4:68818070-68818089 Msa0866800:intron 50.0%
CCAACAGAGCTATACTCACG+GGG + chr5_4:68819860-68819879 None:intergenic 50.0%
GCATTGTTATATGCTGGGGC+CGG - chr5_4:68819889-68819908 Msa0866800:CDS 50.0%
CATTGTTATATGCTGGGGCC+GGG - chr5_4:68819890-68819909 Msa0866800:CDS 50.0%
! GGTGAATAAGTGAGGTGTCC+AGG + chr5_4:68819924-68819943 None:intergenic 50.0%
AAGGAGTGGACCTTCCAACA+AGG + chr5_4:68820214-68820233 None:intergenic 50.0%
AAGGTTCGCGGTTGCAAACT+TGG - chr5_4:68820343-68820362 Msa0866800:intron 50.0%
AGGTTCGCGGTTGCAAACTT+GGG - chr5_4:68820344-68820363 Msa0866800:intron 50.0%
CTGTGACGCACTTGCAAATG+AGG - chr5_4:68820401-68820420 Msa0866800:intron 50.0%
CCAAAATCCTTGGCAGGACT+AGG + chr5_4:68821054-68821073 None:intergenic 50.0%
! CCTAGTCCTGCCAAGGATTT+TGG - chr5_4:68821051-68821070 Msa0866800:intron 50.0%
! GTCCTGCCAAGGATTTTGGA+TGG - chr5_4:68821055-68821074 Msa0866800:intron 50.0%
TGCCATCCAAAATCCTTGGC+AGG + chr5_4:68821060-68821079 None:intergenic 50.0%
GGTCTAGTAACTCGGCTGAT+TGG - chr5_4:68821380-68821399 Msa0866800:intron 50.0%
! TTTTCAACTCCACCAGCTGG+AGG - chr5_4:68821418-68821437 Msa0866800:intron 50.0%
! TGAACAGCCTGGAGCACTAT+CGG - chr5_4:68821777-68821796 Msa0866800:intron 50.0%
CAGCAATCGGGAATCATGAG+AGG - chr5_4:68821950-68821969 Msa0866800:intron 50.0%
TCCAATGCCAACTGCAGCAA+AGG - chr5_4:68822159-68822178 Msa0866800:intron 50.0%
TCCTTTGCTGCAGTTGGCAT+TGG + chr5_4:68822163-68822182 None:intergenic 50.0%
GGCTTATCCTTTGCTGCAGT+TGG + chr5_4:68822169-68822188 None:intergenic 50.0%
CTGCAGCAAAGGATAAGCCT+TGG - chr5_4:68822170-68822189 Msa0866800:intron 50.0%
CTGGTCCGAAAATTCTGAGC+AGG - chr5_4:68822246-68822265 Msa0866800:intron 50.0%
CTCGTGAGGTCTATGGATCA+TGG - chr5_4:68822490-68822509 Msa0866800:intron 50.0%
CCGGTTCAAGCGATTAAAGG+TGG + chr5_4:68822521-68822540 None:intergenic 50.0%
TCGCTTGAACCGGAACCAAA+TGG - chr5_4:68822528-68822547 Msa0866800:intron 50.0%
!! TTGGCGGTTTGGTAGCCATT+TGG + chr5_4:68822546-68822565 None:intergenic 50.0%
GCTCCTGTACATGCTGTCAT+TGG - chr5_4:68822999-68823018 Msa0866800:intron 50.0%
TACTGCCGACCTATGAAGCA+CGG - chr5_4:68823163-68823182 Msa0866800:intron 50.0%
CGTATCCGTGCTTCATAGGT+CGG + chr5_4:68823171-68823190 None:intergenic 50.0%
CGACCTATGAAGCACGGATA+CGG - chr5_4:68823169-68823188 Msa0866800:intron 50.0%
TGTCCGTATCCGTGCTTCAT+AGG + chr5_4:68823175-68823194 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+TGG - chr5_4:68823175-68823194 Msa0866800:intron 50.0%
CTGAGAGCTGGAGCTTGAAA+AGG - chr5_4:68823564-68823583 Msa0866800:CDS 50.0%
GGACTATTCCCATCCTAGGT+AGG + chr5_4:68824147-68824166 None:intergenic 50.0%
ACCTAGGATGGGAATAGTCC+AGG - chr5_4:68824147-68824166 Msa0866800:five_prime_UTR 50.0%
GACCATAGGTCCTTGTTGGA+CGG + chr5_4:68824173-68824192 None:intergenic 50.0%
GCTAGACCATAGGTCCTTGT+TGG + chr5_4:68824177-68824196 None:intergenic 50.0%
GGCGTTTCGAAACCGAGAGA+TGG - chr5_4:68816351-68816370 Msa0866800:intron 55.0%
CTCGGGGAGGCTTCATTTAG+AGG - chr5_4:68817408-68817427 Msa0866800:intron 55.0%
CAGATGGAGGGCCGAATCTT+AGG + chr5_4:68817721-68817740 None:intergenic 55.0%
AATGCAGTGGGGACTCTGGA+TGG - chr5_4:68818074-68818093 Msa0866800:intron 55.0%
TGTGTGGTGGTCCAACCCTT+TGG + chr5_4:68819126-68819145 None:intergenic 55.0%
! CCCCGTGAGTATAGCTCTGT+TGG - chr5_4:68819857-68819876 Msa0866800:CDS 55.0%
TTTCTCAGCCCCTGCCTTGT+TGG - chr5_4:68820197-68820216 Msa0866800:intron 55.0%
TGGACCTTCCAACAAGGCAG+GGG + chr5_4:68820208-68820227 None:intergenic 55.0%
GTGGACCTTCCAACAAGGCA+GGG + chr5_4:68820209-68820228 None:intergenic 55.0%
AGTGGACCTTCCAACAAGGC+AGG + chr5_4:68820210-68820229 None:intergenic 55.0%
!! GACATGGGTTAGTGGGGACA+AGG - chr5_4:68820828-68820847 Msa0866800:intron 55.0%
AGTTGTGCCTAGTCCTGCCA+AGG - chr5_4:68821044-68821063 Msa0866800:intron 55.0%
TCATCTGATCCTCCAGCTGG+TGG + chr5_4:68821430-68821449 None:intergenic 55.0%
AGCTCATCTGATCCTCCAGC+TGG + chr5_4:68821433-68821452 None:intergenic 55.0%
CCACATTCACCACCAGAGTC+AGG + chr5_4:68822118-68822137 None:intergenic 55.0%
! CCTGACTCTGGTGGTGAATG+TGG - chr5_4:68822115-68822134 Msa0866800:intron 55.0%
CATGCTGTCATTGGCATGGC+TGG - chr5_4:68823008-68823027 Msa0866800:intron 55.0%
ACGGATACGGACATGGACAC+CGG - chr5_4:68823182-68823201 Msa0866800:intron 55.0%
CGACGTGTTAGTGTCGTGTC+CGG + chr5_4:68823204-68823223 None:intergenic 55.0%
ACACGACACATGTCCGACAC+CGG - chr5_4:68823278-68823297 Msa0866800:intron 55.0%
TGAAGCACGGACCTCGGATT+AGG + chr5_4:68823310-68823329 None:intergenic 55.0%
TTGTCGGCAGCGATGAAGCA+CGG + chr5_4:68823323-68823342 None:intergenic 55.0%
GCCTGGACTATTCCCATCCT+AGG + chr5_4:68824151-68824170 None:intergenic 55.0%
ATAGTCCAGGCCGTCCAACA+AGG - chr5_4:68824160-68824179 Msa0866800:five_prime_UTR 55.0%
CGGTTTCGAAACGCCGGTGA+CGG + chr5_4:68816346-68816365 None:intergenic 60.0%
GGTGTCCAGGGTTCGAATCC+CGG + chr5_4:68819911-68819930 None:intergenic 60.0%
! TCAGCCCCTGCCTTGTTGGA+AGG - chr5_4:68820201-68820220 Msa0866800:intron 60.0%
CACGACACATGTCCGACACC+GGG - chr5_4:68823279-68823298 Msa0866800:intron 60.0%
GATTAGGCGTGTCCCGGTGT+CGG + chr5_4:68823294-68823313 None:intergenic 60.0%
! ACCTCGGATTAGGCGTGTCC+CGG + chr5_4:68823300-68823319 None:intergenic 60.0%
CAGCGATGAAGCACGGACCT+CGG + chr5_4:68823316-68823335 None:intergenic 60.0%
! TGCATTGGCAGGCTGAGAGC+TGG - chr5_4:68823552-68823571 Msa0866800:CDS 60.0%
TAGGTCCTTGTTGGACGGCC+TGG + chr5_4:68824168-68824187 None:intergenic 60.0%
GGCCGTCCAACAAGGACCTA+TGG - chr5_4:68824168-68824187 Msa0866800:five_prime_UTR 60.0%
ACCGGGACACGCCTAATCCG+AGG - chr5_4:68823296-68823315 Msa0866800:intron 65.0%
TGGGGCCGGGATTCGAACCC+TGG - chr5_4:68819903-68819922 Msa0866800:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 68815904 68824216 68815904 ID=Msa0866800;Name=Msa0866800
chr5_4 mRNA 68815904 68824216 68815904 ID=Msa0866800-mRNA-1;Parent=Msa0866800;Name=Msa0866800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=171|1|1|1|0.92|0.85|14|357|634
chr5_4 exon 68815904 68816101 68815904 ID=Msa0866800-mRNA-1:exon:21771;Parent=Msa0866800-mRNA-1
chr5_4 exon 68816142 68816354 68816142 ID=Msa0866800-mRNA-1:exon:21770;Parent=Msa0866800-mRNA-1
chr5_4 exon 68816477 68816557 68816477 ID=Msa0866800-mRNA-1:exon:21769;Parent=Msa0866800-mRNA-1
chr5_4 exon 68817062 68817250 68817062 ID=Msa0866800-mRNA-1:exon:21768;Parent=Msa0866800-mRNA-1
chr5_4 exon 68817335 68817425 68817335 ID=Msa0866800-mRNA-1:exon:21767;Parent=Msa0866800-mRNA-1
chr5_4 exon 68817692 68817759 68817692 ID=Msa0866800-mRNA-1:exon:21766;Parent=Msa0866800-mRNA-1
chr5_4 exon 68817853 68818039 68817853 ID=Msa0866800-mRNA-1:exon:21765;Parent=Msa0866800-mRNA-1
chr5_4 exon 68818149 68818336 68818149 ID=Msa0866800-mRNA-1:exon:21764;Parent=Msa0866800-mRNA-1
chr5_4 exon 68818601 68818733 68818601 ID=Msa0866800-mRNA-1:exon:21763;Parent=Msa0866800-mRNA-1
chr5_4 exon 68818966 68819080 68818966 ID=Msa0866800-mRNA-1:exon:21762;Parent=Msa0866800-mRNA-1
chr5_4 exon 68819192 68819300 68819192 ID=Msa0866800-mRNA-1:exon:21761;Parent=Msa0866800-mRNA-1
chr5_4 exon 68819819 68820085 68819819 ID=Msa0866800-mRNA-1:exon:21760;Parent=Msa0866800-mRNA-1
chr5_4 exon 68823522 68823609 68823522 ID=Msa0866800-mRNA-1:exon:21759;Parent=Msa0866800-mRNA-1
chr5_4 exon 68823711 68824216 68823711 ID=Msa0866800-mRNA-1:exon:21758;Parent=Msa0866800-mRNA-1
chr5_4 five_prime_UTR 68824046 68824216 68824046 ID=Msa0866800-mRNA-1:five_prime_utr;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68823711 68824045 68823711 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68823522 68823609 68823522 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68819819 68820085 68819819 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68819192 68819300 68819192 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68818966 68819080 68818966 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68818601 68818733 68818601 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68818149 68818336 68818149 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68817853 68818039 68817853 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68817692 68817759 68817692 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68817335 68817425 68817335 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68817062 68817250 68817062 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68816477 68816557 68816477 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 CDS 68816301 68816354 68816301 ID=Msa0866800-mRNA-1:cds;Parent=Msa0866800-mRNA-1
chr5_4 three_prime_UTR 68816142 68816300 68816142 ID=Msa0866800-mRNA-1:three_prime_utr;Parent=Msa0866800-mRNA-1
chr5_4 three_prime_UTR 68815904 68816101 68815904 ID=Msa0866800-mRNA-1:three_prime_utr;Parent=Msa0866800-mRNA-1
Gene Sequence

>Msa0866800

ATGGAATCCTCAAATTGGGTTCTCAAACATGTATTCATTTTACTCTTTTTCTTCCTTATTAGCCCTTCAATGTCTACAACTTTCCCTTCCTCAACTTTGGACCTTACGGTTAAACACACTAAATCCTTACACCAAAATTTTACTGCATTATCAGATTTTAGGTTGATAAATAGAAGAATTTTGAATGATTGTTCTCATTTAAGTCCTTATCTTAAACTGAATATCAGCTCAAATTCTAAATTGTTGGATGAGGAGTTTGTCACGGTTACCGTCACCGGCGTTTCGAAACCGAGAGATGGAGATTGGTTGGCTATGATCTCACCTTCAAATTCCAATGTTAAAGCTTGTCTTCTCAATGAGTTCTATTATTTACAAACTGGTGATACTGCAAAACTTCCTCTGCTTTGCCATTACCCTGTCAAGGCACAATACTTGAAAAACGATCCAGATTACATGAGCTGCAAAAAGAAAGAATGCAAGAAAGAACAGAATGGGAAATGCAGTGTGACAACTTGTAGTGGTTCAATAAAGTTTCATGTTATCAACATTAGAAGTGATATAGAGTTTGTGTTCTTCACTGGTGGCTTTCTCAGCCCCTGCCTTGTTGGAAGGTCCACTCCTTTGAGTTTTGCTAATCCTAAGAAGCCACTTTATGGACATATCTCAAGTATAGATTCAACTGCAACATCAATGAGATTGACATGGGTTAGTGGGGACAAGGAACCTCAGCAAATCCAATATGCAAATGGAAAAACAGTTACTTCTGCAGTCACTACTTTTTCACAGGAAGATATGTGCAGTTCAGTTGTGCCTAGTCCTGCCAAGGATTTTGGATGGCATGATCCAGGATTCATCCATTCAGCACTTATGACAGGACTTAAGCCATCAAGTGCTTACTCCTACAGATATGGAAGTAACTCGGCTGATTGGAGCGAACAAACCAAATTTTCAACTCCACCAGCTGGAGGATCAGATGAGCTCAAATTCATTTCCTTTGGTGATATGGGAAAAACCCCTCTTGATGCTTCAGAAGAACACTACATTCAGCCTGGAGCACTATCGGTTATCAAAGCTATAGCTAATGAAGTGAACTCCAACAATGTAAACTCAGTGTTTCACATTGGAGACATAAGTTATGCAACTGGTTTTCTAGCAGAATGGGATTTCTTCTTGAACCTTATTAGTCCAGTAGCTTCAAGAGTTTCATACATGACAGCAATCGGGAATCATGAGAGAGATTATGTCGATTCTGGTTCAGTTTATGTTACTCCTGACTCTGGTGGTGAATGTGGAGTACCGTATGAAACATACTTTCCAATGCCAACTGCAGCAAAGGATAAGCCTTGGTACTCTATTGAACAAGGAAGTGTTCATTTCATTGTAATATCAACCGAACATGACTGGTCCGAAAATTCTGAGCAGTATAACTGGATGAAAAAGGACATGGCATCTGTTAATAGACAACATACTCCTTGGCTGATTTTCATGGGACATAGACCAATGTACACTTCCAACAACGGATTATCATCTAAAGATCAGAAATTTATTAACGCTGTGGAGCCATTGCTGTTACAGAATAAGGTTGACTTGGTTCTTTTTGGCCATGTGCATAACTATGAGAGAACTTGTTCTGTCTATCAGAATAAGTGCAAAGCCATTCCTATAAAAGATCAAAAGGGAGTAGACACATATGATAACAGAAATTATACTGCTCCTGTACATGCTGTCATTGGCATGGCTGGTTTCGCCTTAGACAAATTCTCAAACAATGCTGAGAGCTGGAGCTTGAAAAGGATTTCTGAGTTTGGTTATTTAAGAGCACATGCTACTAGAAATGATTTAAGCTTAGAGTTTGTGACATCAGATACAAGAGAAGTTAAGGACAGTTTTCGCATAACAAAGTGA
Protein sequence

>Msa0866800

MESSNWVLKHVFILLFFFLISPSMSTTFPSSTLDLTVKHTKSLHQNFTALSDFRLINRRILNDCSHLSPYLKLNISSNSKLLDEEFVTVTVTGVSKPRDGDWLAMISPSNSNVKACLLNEFYYLQTGDTAKLPLLCHYPVKAQYLKNDPDYMSCKKKECKKEQNGKCSVTTCSGSIKFHVINIRSDIEFVFFTGGFLSPCLVGRSTPLSFANPKKPLYGHISSIDSTATSMRLTWVSGDKEPQQIQYANGKTVTSAVTTFSQEDMCSSVVPSPAKDFGWHDPGFIHSALMTGLKPSSAYSYRYGSNSADWSEQTKFSTPPAGGSDELKFISFGDMGKTPLDASEEHYIQPGALSVIKAIANEVNSNNVNSVFHIGDISYATGFLAEWDFFLNLISPVASRVSYMTAIGNHERDYVDSGSVYVTPDSGGECGVPYETYFPMPTAAKDKPWYSIEQGSVHFIVISTEHDWSENSEQYNWMKKDMASVNRQHTPWLIFMGHRPMYTSNNGLSSKDQKFINAVEPLLLQNKVDLVLFGHVHNYERTCSVYQNKCKAIPIKDQKGVDTYDNRNYTAPVHAVIGMAGFALDKFSNNAESWSLKRISEFGYLRAHATRNDLSLEFVTSDTREVKDSFRITK*