Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542360 | KAG4992381.1 | 60.531 | 565 | 80 | 6 | 3 | 480 | 8 | 516 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542360 | sp|Q8H1R2|PPA24_ARATH | 29.167 | 240 | 98 | 8 | 320 | 497 | 366 | 595 | 4.53e-18 | 90.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542360 | A0A1J7H7L8 | 57.143 | 532 | 83 | 6 | 43 | 485 | 1 | 476 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0204780 | Msa0542360 | 0.806410 | 8.339903e-50 | -8.615850e-47 |
| Msa0379060 | Msa0542360 | 0.816643 | 4.974447e-52 | -8.615850e-47 |
| Msa0475050 | Msa0542360 | 0.818018 | 2.439688e-52 | -8.615850e-47 |
| Msa0542360 | Msa0598560 | 0.917035 | 8.663794e-86 | -8.615850e-47 |
| Msa0542360 | Msa0677570 | 0.931818 | 2.151091e-94 | -8.615850e-47 |
| Msa0542360 | Msa0866800 | 0.919275 | 5.518730e-87 | -8.615850e-47 |
| Msa0542360 | Msa0896370 | 0.802943 | 4.412251e-49 | -8.615850e-47 |
| Msa0542360 | Msa1190990 | 0.804102 | 2.537240e-49 | -8.615850e-47 |
| Msa0542360 | Msa1368180 | 0.813244 | 2.823082e-51 | -8.615850e-47 |
| Msa0542360 | Msa1385580 | 0.803956 | 2.721126e-49 | -8.615850e-47 |
| Msa0542360 | Msa1395320 | -0.803718 | 3.049325e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542360 | MtrunA17_Chr4g0022251 | 80.380 | 316 | 9 | 2 | 1 | 283 | 1 | 296 | 1.18e-165 | 483 |
| Msa0542360 | MtrunA17_Chr4g0022251 | 74.439 | 223 | 4 | 1 | 328 | 497 | 412 | 634 | 2.55e-107 | 333 |
| Msa0542360 | MtrunA17_Chr1g0173511 | 55.300 | 217 | 33 | 2 | 328 | 480 | 276 | 492 | 1.02e-66 | 223 |
| Msa0542360 | MtrunA17_Chr1g0173511 | 69.872 | 156 | 13 | 2 | 162 | 283 | 5 | 160 | 4.52e-57 | 197 |
| Msa0542360 | MtrunA17_Chr1g0173501 | 77.333 | 150 | 25 | 3 | 1 | 142 | 1 | 149 | 2.57e-60 | 196 |
| Msa0542360 | MtrunA17_Chr3g0116051 | 27.391 | 230 | 115 | 4 | 320 | 497 | 374 | 603 | 1.98e-17 | 85.5 |
| Msa0542360 | MtrunA17_Chr8g0364481 | 26.908 | 249 | 126 | 7 | 302 | 497 | 347 | 592 | 2.22e-16 | 82.0 |
| Msa0542360 | MtrunA17_Chr4g0057551 | 27.706 | 231 | 113 | 6 | 320 | 497 | 378 | 607 | 2.27e-16 | 82.0 |
| Msa0542360 | MtrunA17_Chr5g0419621 | 28.571 | 231 | 111 | 7 | 320 | 497 | 370 | 599 | 5.20e-16 | 80.9 |
| Msa0542360 | MtrunA17_Chr3g0116081 | 32.110 | 109 | 66 | 3 | 390 | 497 | 14 | 115 | 1.75e-12 | 64.7 |
| Msa0542360 | MtrunA17_Chr3g0116091 | 28.873 | 142 | 92 | 4 | 357 | 497 | 266 | 399 | 4.47e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542360 | AT4G24890.1 | 29.167 | 240 | 98 | 8 | 320 | 497 | 366 | 595 | 4.60e-19 | 90.9 |
| Msa0542360 | AT5G50400.2 | 29.130 | 230 | 111 | 5 | 320 | 497 | 290 | 519 | 2.79e-18 | 88.2 |
| Msa0542360 | AT5G50400.1 | 29.130 | 230 | 111 | 5 | 320 | 497 | 362 | 591 | 3.48e-18 | 88.2 |
| Msa0542360 | AT5G50400.1 | 25.000 | 288 | 127 | 9 | 37 | 284 | 13 | 251 | 1.43e-14 | 76.6 |
| Msa0542360 | AT1G13750.1 | 29.437 | 231 | 109 | 6 | 320 | 497 | 364 | 593 | 1.34e-16 | 83.2 |
Find 129 sgRNAs with CRISPR-Local
Find 725 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGTCCTGCCAAGGATTT+TGG | 0.134636 | 4_1:-27175471 | Msa0542360:CDS |
| ATTCATTTCCTTTGGTGATA+TGG | 0.160418 | 4_1:-27175024 | Msa0542360:CDS |
| CTGATAATGCAGTAAAATTT+TGG | 0.174680 | 4_1:+27183524 | None:intergenic |
| CATTCATGGAATCCTCAAAT+TGG | 0.180390 | 4_1:-27183660 | Msa0542360:exon |
| CCTGATTATGACAAGAAATA+AGG | 0.226305 | 4_1:+27172230 | None:intergenic |
| AGCTGGTGGAGTTGAAAATT+TGG | 0.227346 | 4_1:+27175067 | None:intergenic |
| AGACTATAGAATTTGAATTA+AGG | 0.246488 | 4_1:+27183700 | None:intergenic |
| TTCAGAGATTATGTCGATTC+TGG | 0.253362 | 4_1:-27174212 | Msa0542360:intron |
| TAGAAATGATTTAAACTTAG+AGG | 0.262549 | 4_1:-27172654 | Msa0542360:intron |
| TTTCCATTCATCTTCATTCA+TGG | 0.265109 | 4_1:-27183674 | Msa0542360:exon |
| TGATTGGAAGTCTTCTCTTA+TGG | 0.285245 | 4_1:-27177351 | Msa0542360:intron |
| AGAAAATGAGGCCTTGGTTT+TGG | 0.290092 | 4_1:+27183755 | None:intergenic |
| CCTTATTTCTTGTCATAATC+AGG | 0.300265 | 4_1:-27172230 | Msa0542360:three_prime_UTR |
| TTCATTTCCTTTGGTGATAT+GGG | 0.313819 | 4_1:-27175023 | Msa0542360:CDS |
| CAGCTCAAATTCTAAATTGT+TGG | 0.325166 | 4_1:-27183431 | Msa0542360:CDS |
| TAGTAATGATGATAACTCTT+AGG | 0.342463 | 4_1:+27183813 | None:intergenic |
| TAGACATTGAAGGGCTAATA+AGG | 0.346423 | 4_1:+27183602 | None:intergenic |
| CGAAACCGAGAGATGGAGAT+TGG | 0.347083 | 4_1:-27183372 | Msa0542360:CDS |
| GAGCTCAAATTCATTTCCTT+TGG | 0.349534 | 4_1:-27175032 | Msa0542360:CDS |
| ACACATATAGATATATTAAA+AGG | 0.355435 | 4_1:-27172379 | Msa0542360:three_prime_UTR |
| TTGAAAAGGATTTCTGAGTT+TGG | 0.356122 | 4_1:-27172698 | Msa0542360:CDS |
| AACTTTCCCTTCCTCAACTT+TGG | 0.356583 | 4_1:-27183578 | Msa0542360:CDS |
| TTTCTCAGCCCCTGCCTTGT+TGG | 0.369987 | 4_1:-27176334 | Msa0542360:CDS |
| GGCTTATCCTTTGCTGCAGT+TGG | 0.372410 | 4_1:+27174122 | None:intergenic |
| AAAGGAAGAAAATGAGGCCT+TGG | 0.387156 | 4_1:+27183749 | None:intergenic |
| TATTCTTACTTGGAATTTGA+AGG | 0.390234 | 4_1:+27183334 | None:intergenic |
| AGAAACAAATGCAGAATTGT+AGG | 0.391975 | 4_1:-27172434 | Msa0542360:three_prime_UTR |
| TCCTTTGCTGCAGTTGGCAT+TGG | 0.393804 | 4_1:+27174128 | None:intergenic |
| CTGATTATGACAAGAAATAA+GGG | 0.394446 | 4_1:+27172231 | None:intergenic |
| GAGGAAACAAGTGGTTTGAT+TGG | 0.398408 | 4_1:-27177367 | Msa0542360:CDS |
| ATTGTTTGAGAATTTGTCTA+AGG | 0.400148 | 4_1:+27173263 | None:intergenic |
| ATCAGATACAAGAGAAGTTA+AGG | 0.412947 | 4_1:-27172502 | Msa0542360:CDS |
| CATGCTGTCATTGGCATGGC+TGG | 0.413111 | 4_1:-27173291 | Msa0542360:CDS |
| TTCCTCAACTTTGGACCTTA+CGG | 0.414650 | 4_1:-27183569 | Msa0542360:CDS |
| ATTCATGGAATCCTCAAATT+GGG | 0.416882 | 4_1:-27183659 | Msa0542360:exon |
| TCAGCCCCTGCCTTGTTGGA+AGG | 0.422865 | 4_1:-27176330 | Msa0542360:intron |
| CATTCCTATAAAAGATCAAA+AGG | 0.427448 | 4_1:-27173355 | Msa0542360:CDS |
| ATTGGAAAGTATGTTTCATA+TGG | 0.439381 | 4_1:+27174146 | None:intergenic |
| CTGATATTCAGTTTAAGATA+AGG | 0.443765 | 4_1:+27183451 | None:intergenic |
| TAGGTCCTTGTTGGACGGCC+TGG | 0.450025 | 4_1:+27172153 | None:intergenic |
| GAGTTCTATTATCTACAAAC+TGG | 0.450191 | 4_1:-27183221 | Msa0542360:CDS |
| CCGATGATGGTCTAGTAAAT+CGG | 0.457588 | 4_1:-27175108 | Msa0542360:intron |
| CAGCAAATCCAATATGCAAA+TGG | 0.463555 | 4_1:-27175671 | Msa0542360:CDS |
| TTTGTCACGGTTACCGTCAC+CGG | 0.464369 | 4_1:-27183400 | Msa0542360:CDS |
| TTGCAAGATGTTTCTGTTGG+AGG | 0.471395 | 4_1:-27177386 | Msa0542360:CDS |
| ATTCCATGAATGAAGATGAA+TGG | 0.471417 | 4_1:+27183671 | None:intergenic |
| GCTAGACCATAGGTCCTTGT+TGG | 0.471709 | 4_1:+27172144 | None:intergenic |
| ATGTTTGAGAACCCAATTTG+AGG | 0.472251 | 4_1:+27183648 | None:intergenic |
| GGTCTAGTAAATCGGCTGAT+TGG | 0.472495 | 4_1:-27175100 | Msa0542360:intron |
| GACTATTCCCACCCTAGGTA+GGG | 0.474315 | 4_1:+27172175 | None:intergenic |
| TAAACGAGTTGGACCGAGCT+AGG | 0.474480 | 4_1:+27172111 | None:intergenic |
| GGACTATTCCCACCCTAGGT+AGG | 0.478456 | 4_1:+27172174 | None:intergenic |
| CTGAGAGCTGGAGCTTGAAA+AGG | 0.484148 | 4_1:-27172712 | Msa0542360:CDS |
| AGCTCATCTGATCCTCCAGC+TGG | 0.484295 | 4_1:+27175050 | None:intergenic |
| ATAGAGTTTGTGTTCTTCAC+TGG | 0.484965 | 4_1:-27176361 | Msa0542360:CDS |
| CCAAAATCCTTGGCAGGACT+AGG | 0.485338 | 4_1:+27175471 | None:intergenic |
| ATCCATTCAGCACTTATGAC+TGG | 0.493458 | 4_1:-27175429 | Msa0542360:CDS |
| TTCAGAAGAACACTACATTC+AGG | 0.496934 | 4_1:-27174982 | Msa0542360:intron |
| CCGCATTCACCACCAGAGTC+AGG | 0.499819 | 4_1:+27174173 | None:intergenic |
| AACCGTAAGGTCCAAAGTTG+AGG | 0.499979 | 4_1:+27183567 | None:intergenic |
| GCTCCTGTACATGCTGTCAT+TGG | 0.501222 | 4_1:-27173300 | Msa0542360:CDS |
| GTTTATGTTACTCCTGACTC+TGG | 0.501264 | 4_1:-27174185 | Msa0542360:CDS |
| AATGCAAGAAAGAACAGAAT+GGG | 0.502167 | 4_1:-27176447 | Msa0542360:CDS |
| GAAACCGAGAGATGGAGATT+GGG | 0.503019 | 4_1:-27183371 | Msa0542360:CDS |
| GGCCGTCCAACAAGGACCTA+TGG | 0.503984 | 4_1:-27172150 | Msa0542360:three_prime_UTR |
| TGCATTGGCAGGCTGAGAGC+TGG | 0.506342 | 4_1:-27172724 | Msa0542360:intron |
| CTGGTCTGAAAATTCTGAGC+AGG | 0.508598 | 4_1:-27174042 | Msa0542360:intron |
| AGTGGACCTTCCAACAAGGC+AGG | 0.508899 | 4_1:+27176324 | None:intergenic |
| ATTTAGTGTGTTTAACCGTA+AGG | 0.512631 | 4_1:+27183554 | None:intergenic |
| TGCCATCCAAAATCCTTGGC+AGG | 0.514716 | 4_1:+27175465 | None:intergenic |
| GGGAAAGTTGTAGACATTGA+AGG | 0.519414 | 4_1:+27183592 | None:intergenic |
| GAGTTTGTGTTCTTCACTGG+TGG | 0.522900 | 4_1:-27176358 | Msa0542360:CDS |
| AGTGCTGAATGGATGAATCC+TGG | 0.523299 | 4_1:+27175438 | None:intergenic |
| TCCAATGCCAACTGCAGCAA+AGG | 0.523966 | 4_1:-27174129 | Msa0542360:CDS |
| GACATACCTTGACAGGGTAA+TGG | 0.531072 | 4_1:+27183171 | None:intergenic |
| GTCCAGTCATAAGTGCTGAA+TGG | 0.532983 | 4_1:+27175427 | None:intergenic |
| ATGCCAATGACAGCATGTAC+AGG | 0.534351 | 4_1:+27173297 | None:intergenic |
| ATCATGCCATCCAAAATCCT+TGG | 0.535399 | 4_1:+27175461 | None:intergenic |
| TCATCATTACTACTAAGAAA+AGG | 0.539526 | 4_1:-27183802 | Msa0542360:five_prime_UTR |
| TCATCTGATCCTCCAGCTGG+TGG | 0.542127 | 4_1:+27175053 | None:intergenic |
| AAATTCTAAATTGTTGGATG+AGG | 0.543261 | 4_1:-27183425 | Msa0542360:CDS |
| GAATGCAAGAAAGAACAGAA+TGG | 0.545134 | 4_1:-27176448 | Msa0542360:CDS |
| GCTTTGCCATTACCCTGTCA+AGG | 0.547055 | 4_1:-27183177 | Msa0542360:intron |
| GCCACCCAATCTCCATCTCT+CGG | 0.548027 | 4_1:+27183367 | None:intergenic |
| TCATATTATACCCCTACCTA+GGG | 0.550972 | 4_1:-27172186 | Msa0542360:three_prime_UTR |
| AGCTTATTTAAAGCCTAGCT+CGG | 0.551787 | 4_1:-27172124 | Msa0542360:three_prime_UTR |
| TGTGCATGACATACCTTGAC+AGG | 0.552123 | 4_1:+27183164 | None:intergenic |
| TTTGCATATTGGATTTGCTG+AGG | 0.552556 | 4_1:+27175674 | None:intergenic |
| GGCGTTTCGAAACCGAGAGA+TGG | 0.556098 | 4_1:-27183379 | Msa0542360:CDS |
| ACCTAGGGTGGGAATAGTCC+AGG | 0.558390 | 4_1:-27172171 | Msa0542360:three_prime_UTR |
| CGGTTTCGAAACGCCGGTGA+CGG | 0.566494 | 4_1:+27183387 | None:intergenic |
| TGGACCTTCCAACAAGGCAG+GGG | 0.567412 | 4_1:+27176326 | None:intergenic |
| TATTATACCCCTACCTAGGG+TGG | 0.567646 | 4_1:-27172183 | Msa0542360:three_prime_UTR |
| TAATATCAACTGAACATGAC+TGG | 0.568384 | 4_1:-27174061 | Msa0542360:CDS |
| CCTTGGTACTCTATTGAACA+AGG | 0.571416 | 4_1:-27174101 | Msa0542360:CDS |
| GGAAAGTTGTAGACATTGAA+GGG | 0.572421 | 4_1:+27183593 | None:intergenic |
| TTCATATTATACCCCTACCT+AGG | 0.573171 | 4_1:-27172187 | Msa0542360:three_prime_UTR |
| TGTACATGCTGTCATTGGCA+TGG | 0.577657 | 4_1:-27173295 | Msa0542360:CDS |
| ATTCCTATAAAAGATCAAAA+GGG | 0.581083 | 4_1:-27173354 | Msa0542360:CDS |
| GTTCTTCTGAAGCATCAAGA+GGG | 0.581323 | 4_1:+27174994 | None:intergenic |
| GTGGACCTTCCAACAAGGCA+GGG | 0.584213 | 4_1:+27176325 | None:intergenic |
| ATCTCTCGGTTTCGAAACGC+CGG | 0.585583 | 4_1:+27183381 | None:intergenic |
| CTGCAGCAAAGGATAAGCCT+TGG | 0.586086 | 4_1:-27174118 | Msa0542360:CDS |
| GTAAGGTCCAAAGTTGAGGA+AGG | 0.587368 | 4_1:+27183571 | None:intergenic |
| GACCATAGGTCCTTGTTGGA+CGG | 0.591869 | 4_1:+27172148 | None:intergenic |
| TTCTCTCATAATTATGCACA+TGG | 0.592703 | 4_1:+27173409 | None:intergenic |
| GAACATGAAACAGGTTGACT+TGG | 0.593153 | 4_1:-27173442 | Msa0542360:intron |
| ACTATTCCCACCCTAGGTAG+GGG | 0.596121 | 4_1:+27172176 | None:intergenic |
| ATAGATATATTAAAAGGCAA+AGG | 0.597912 | 4_1:-27172373 | Msa0542360:three_prime_UTR |
| ATTATACCCCTACCTAGGGT+GGG | 0.602376 | 4_1:-27172182 | Msa0542360:three_prime_UTR |
| ACCGAGAGATGGAGATTGGG+TGG | 0.606477 | 4_1:-27183368 | Msa0542360:CDS |
| GTTGGATGAGGAGTTTGTCA+CGG | 0.615270 | 4_1:-27183413 | Msa0542360:CDS |
| AGTAGTGCCTAGTCCTGCCA+AGG | 0.616806 | 4_1:-27175478 | Msa0542360:CDS |
| TTCTTCTGAAGCATCAAGAG+GGG | 0.617475 | 4_1:+27174995 | None:intergenic |
| GACATGGGTTAGTGGGGACA+AGG | 0.620413 | 4_1:-27175699 | Msa0542360:intron |
| GCCTGGACTATTCCCACCCT+AGG | 0.622650 | 4_1:+27172170 | None:intergenic |
| TATGTTACTCCTGACTCTGG+TGG | 0.623778 | 4_1:-27174182 | Msa0542360:CDS |
| CCTTGTTCAATAGAGTACCA+AGG | 0.623949 | 4_1:+27174101 | None:intergenic |
| TAAGGTCCAAAGTTGAGGAA+GGG | 0.632550 | 4_1:+27183572 | None:intergenic |
| CCTGACTCTGGTGGTGAATG+CGG | 0.641111 | 4_1:-27174173 | Msa0542360:CDS |
| TGTTCTTCTGAAGCATCAAG+AGG | 0.645423 | 4_1:+27174993 | None:intergenic |
| ATAGTCCAGGCCGTCCAACA+AGG | 0.645533 | 4_1:-27172158 | Msa0542360:three_prime_UTR |
| AAGGAGTGGACCTTCCAACA+AGG | 0.647985 | 4_1:+27176320 | None:intergenic |
| CTTTAAATAAGCTAGACCAT+AGG | 0.654566 | 4_1:+27172134 | None:intergenic |
| AAAGATACAAACCAAAACCA+AGG | 0.655546 | 4_1:-27183766 | Msa0542360:five_prime_UTR |
| ACAGGGTAATGGCAAAGCAG+AGG | 0.665481 | 4_1:+27183182 | None:intergenic |
| TGCAGTGTGACAACTTGTAG+TGG | 0.671946 | 4_1:-27176421 | Msa0542360:CDS |
| TTTCTGTTGGAGGAAACAAG+TGG | 0.682093 | 4_1:-27177376 | Msa0542360:CDS |
| GTGCATGACATACCTTGACA+GGG | 0.763616 | 4_1:+27183165 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTAATATTTTAT+TGG | - | chr4_1:27173386-27173405 | Msa0542360:CDS | 0.0% |
| !!! | GAAATTTAATTAATATTTTG+GGG | + | chr4_1:27173324-27173343 | None:intergenic | 10.0% |
| !!! | GGAAATTTAATTAATATTTT+GGG | + | chr4_1:27173325-27173344 | None:intergenic | 10.0% |
| !!! | AGGAAATTTAATTAATATTT+TGG | + | chr4_1:27173326-27173345 | None:intergenic | 10.0% |
| !! | ATAATATTTATGTATATTGA+AGG | + | chr4_1:27173456-27173475 | None:intergenic | 10.0% |
| !! | TATATATGTTATACATTTAA+AGG | - | chr4_1:27174160-27174179 | Msa0542360:CDS | 10.0% |
| !!! | TGATTTTTTCAAATTATTAA+CGG | + | chr4_1:27182864-27182883 | None:intergenic | 10.0% |
| !! | GAACAAAATAAGTAAATAAA+CGG | - | chr4_1:27172991-27173010 | Msa0542360:intron | 15.0% |
| !! | AACAAAATAAGTAAATAAAC+GGG | - | chr4_1:27172992-27173011 | Msa0542360:intron | 15.0% |
| !! | AAATATCAATAAATATCCAA+AGG | + | chr4_1:27173179-27173198 | None:intergenic | 15.0% |
| !! | TATAATTCCAAGAAAATAAA+TGG | - | chr4_1:27173205-27173224 | Msa0542360:intron | 15.0% |
| !!! | TTAATATTTTATTGGTGATT+AGG | - | chr4_1:27173394-27173413 | Msa0542360:CDS | 15.0% |
| !! | TACTAAATATAAGAATGTTA+AGG | + | chr4_1:27173511-27173530 | None:intergenic | 15.0% |
| !! | ATTTCAGCATTTAATTAAAT+AGG | + | chr4_1:27173618-27173637 | None:intergenic | 15.0% |
| !! | TGTATAAAAACAATTTGATT+GGG | + | chr4_1:27173944-27173963 | None:intergenic | 15.0% |
| !!! | TTTTTTAAACGATAAATACA+AGG | - | chr4_1:27174132-27174151 | Msa0542360:CDS | 15.0% |
| !! | GGATTATTTATTAATTTAGT+TGG | - | chr4_1:27174591-27174610 | Msa0542360:intron | 15.0% |
| !! | TAAAAAAATTAAGGCTTAAA+TGG | + | chr4_1:27174974-27174993 | None:intergenic | 15.0% |
| !! | TTTATAAATTTAAATTCCAC+AGG | + | chr4_1:27175337-27175356 | None:intergenic | 15.0% |
| !!! | AAACATTTTAAATTATCTCA+CGG | + | chr4_1:27175443-27175462 | None:intergenic | 15.0% |
| !!! | GTTTATTTTTTATGTAATGT+CGG | + | chr4_1:27175551-27175570 | None:intergenic | 15.0% |
| !!! | ACTTATTTTTGAATAGAAAA+TGG | - | chr4_1:27175569-27175588 | Msa0542360:intron | 15.0% |
| !!! | CTTATTTTTGAATAGAAAAT+GGG | - | chr4_1:27175570-27175589 | Msa0542360:intron | 15.0% |
| !! | GAAAACAAAATATTATAAAG+TGG | - | chr4_1:27175780-27175799 | Msa0542360:intron | 15.0% |
| !! | GAAAAATAAAATTATGTTAG+TGG | - | chr4_1:27179170-27179189 | Msa0542360:intron | 15.0% |
| !! | TGATTAAATAACTAAAATGT+AGG | - | chr4_1:27179423-27179442 | Msa0542360:intron | 15.0% |
| !! | TCTAATAATTATAAAATGAG+TGG | - | chr4_1:27180203-27180222 | Msa0542360:intron | 15.0% |
| !! | ATTTCAAATTAAATAAGCTT+TGG | - | chr4_1:27180991-27181010 | Msa0542360:intron | 15.0% |
| !! | ATTTAAGCAAATGAAAATAA+TGG | - | chr4_1:27181090-27181109 | Msa0542360:intron | 15.0% |
| !! | AAAAAAATCATAAGCATAAA+TGG | + | chr4_1:27183166-27183185 | None:intergenic | 15.0% |
| !! | ATATGATAAATTACAAAACA+AGG | + | chr4_1:27183357-27183376 | None:intergenic | 15.0% |
| !! | ACACATATAGATATATTAAA+AGG | - | chr4_1:27183562-27183581 | Msa0542360:CDS | 15.0% |
| !!! | AACAAGATTTTATTGATTAT+AGG | + | chr4_1:27183678-27183697 | None:intergenic | 15.0% |
| !! | AGACTATAGAATTTGAATTA+AGG | + | chr4_1:27172244-27172263 | None:intergenic | 20.0% |
| !! | ACAAAATAAGTAAATAAACG+GGG | - | chr4_1:27172993-27173012 | Msa0542360:intron | 20.0% |
| !! | TTGTTTGGCAAATTATTAAT+TGG | - | chr4_1:27173102-27173121 | Msa0542360:intron | 20.0% |
| !!! | TAACTTTCCATTTATTTTCT+TGG | + | chr4_1:27173215-27173234 | None:intergenic | 20.0% |
| !! | AGTAAAAGAGTTTCTAATTA+AGG | + | chr4_1:27173346-27173365 | None:intergenic | 20.0% |
| !! | TTAGTAAAAAATTAAACTCG+AGG | - | chr4_1:27173525-27173544 | Msa0542360:intron | 20.0% |
| !! | TAGTAGTATGAATGAATTAT+GGG | + | chr4_1:27173662-27173681 | None:intergenic | 20.0% |
| !! | TTAGTAGTATGAATGAATTA+TGG | + | chr4_1:27173663-27173682 | None:intergenic | 20.0% |
| !! | CTACTAAATTAGCATTTAAT+TGG | - | chr4_1:27173676-27173695 | Msa0542360:intron | 20.0% |
| !! | GTGTATAAAAACAATTTGAT+TGG | + | chr4_1:27173945-27173964 | None:intergenic | 20.0% |
| !! | ATGTTAAATATAACTGACAA+TGG | + | chr4_1:27174450-27174469 | None:intergenic | 20.0% |
| !!! | TCTTTTGTTTATACAATAAG+AGG | + | chr4_1:27174815-27174834 | None:intergenic | 20.0% |
| !! | AAACAAAAGATAGTTACATA+TGG | - | chr4_1:27174825-27174844 | Msa0542360:intron | 20.0% |
| !!! | TTAATACTATTTTTCTGCAA+AGG | - | chr4_1:27175026-27175045 | Msa0542360:CDS | 20.0% |
| !!! | TGTGATTTTAGAAATAGTTA+TGG | + | chr4_1:27175473-27175492 | None:intergenic | 20.0% |
| !!! | TCTAAAATCACATTTACAAT+TGG | - | chr4_1:27175481-27175500 | Msa0542360:CDS | 20.0% |
| !! | GAATATTATGATAGAGAATT+GGG | + | chr4_1:27175633-27175652 | None:intergenic | 20.0% |
| !! | AGAATATTATGATAGAGAAT+TGG | + | chr4_1:27175634-27175653 | None:intergenic | 20.0% |
| !! | ATTGTATTTCAAACTCAAAT+TGG | - | chr4_1:27177069-27177088 | Msa0542360:intron | 20.0% |
| !!! | TTTTTTGTTCTTTTTTGTCT+CGG | - | chr4_1:27177750-27177769 | Msa0542360:intron | 20.0% |
| !!! | ATACATTTGAAGTATTATTG+AGG | - | chr4_1:27178483-27178502 | Msa0542360:intron | 20.0% |
| !! | ATATATAGTACATTTACGTA+TGG | + | chr4_1:27179370-27179389 | None:intergenic | 20.0% |
| !!! | GACTAACTAATATTTTTGTA+GGG | + | chr4_1:27179921-27179940 | None:intergenic | 20.0% |
| !!! | AGACTAACTAATATTTTTGT+AGG | + | chr4_1:27179922-27179941 | None:intergenic | 20.0% |
| !! | AAATTAAACTCTTTCATGTT+CGG | + | chr4_1:27179966-27179985 | None:intergenic | 20.0% |
| !!! | ATTTTCCATCTTAAATTGAT+AGG | - | chr4_1:27180437-27180456 | Msa0542360:intron | 20.0% |
| !! | AATTAGTATGAAAAATGTTG+TGG | - | chr4_1:27180610-27180629 | Msa0542360:intron | 20.0% |
| !! | TTATATTAGCGAACAAATTA+TGG | - | chr4_1:27180768-27180787 | Msa0542360:intron | 20.0% |
| !!! | TTTGCTTAAATTTTTGTGTT+CGG | + | chr4_1:27181081-27181100 | None:intergenic | 20.0% |
| !! | CATAATGATATGTCATAATT+AGG | + | chr4_1:27181629-27181648 | None:intergenic | 20.0% |
| !! | TTACTACAATTCAGTTATTA+TGG | + | chr4_1:27182208-27182227 | None:intergenic | 20.0% |
| !! | TAATAACTGAATTGTAGTAA+AGG | - | chr4_1:27182208-27182227 | Msa0542360:intron | 20.0% |
| !! | ATTCCTATAAAAGATCAAAA+GGG | - | chr4_1:27182587-27182606 | Msa0542360:intron | 20.0% |
| !!! | ATAATGATTGTTCTAAATTG+AGG | - | chr4_1:27182734-27182753 | Msa0542360:intron | 20.0% |
| !! | TAGAAATGATTTAAACTTAG+AGG | - | chr4_1:27183287-27183306 | Msa0542360:intron | 20.0% |
| !! | ATAAATTACAAAACAAGGAA+TGG | + | chr4_1:27183352-27183371 | None:intergenic | 20.0% |
| !! | ATAGATATATTAAAAGGCAA+AGG | - | chr4_1:27183568-27183587 | Msa0542360:CDS | 20.0% |
| ! | TAGTAATGATGATAACTCTT+AGG | + | chr4_1:27172131-27172150 | None:intergenic | 25.0% |
| ! | TCATCATTACTACTAAGAAA+AGG | - | chr4_1:27172139-27172158 | Msa0542360:three_prime_UTR | 25.0% |
| !!! | TTTTGTGTGATTGTTTTGAA+AGG | + | chr4_1:27172213-27172232 | None:intergenic | 25.0% |
| !!! | CTGATAATGCAGTAAAATTT+TGG | + | chr4_1:27172420-27172439 | None:intergenic | 25.0% |
| !! | TTACTGCATTATCAGATTTT+AGG | - | chr4_1:27172425-27172444 | Msa0542360:three_prime_UTR | 25.0% |
| !! | CTGATATTCAGTTTAAGATA+AGG | + | chr4_1:27172493-27172512 | None:intergenic | 25.0% |
| ! | AAATTCTAAATTGTTGGATG+AGG | - | chr4_1:27172516-27172535 | Msa0542360:intron | 25.0% |
| ! | TATTCTTACTTGGAATTTGA+AGG | + | chr4_1:27172610-27172629 | None:intergenic | 25.0% |
| ! | TCCAAGTAAGAATATTACAT+TGG | - | chr4_1:27172616-27172635 | Msa0542360:intron | 25.0% |
| ! | ACCAATGTAATATTCTTACT+TGG | + | chr4_1:27172620-27172639 | None:intergenic | 25.0% |
| !!! | TCTCTTTGAGATTAATGATA+TGG | - | chr4_1:27172848-27172867 | Msa0542360:intron | 25.0% |
| !!! | CTCTTTGAGATTAATGATAT+GGG | - | chr4_1:27172849-27172868 | Msa0542360:intron | 25.0% |
| ! | CAAAATAAGTAAATAAACGG+GGG | - | chr4_1:27172994-27173013 | Msa0542360:intron | 25.0% |
| !!! | TATATTACTTCTAGCTTGTT+TGG | - | chr4_1:27173087-27173106 | Msa0542360:intron | 25.0% |
| ! | TATGAAAACAATAGTTGTGT+TGG | - | chr4_1:27173473-27173492 | Msa0542360:intron | 25.0% |
| !!! | AGACTCATACTATTTTTGAA+TGG | + | chr4_1:27173816-27173835 | None:intergenic | 25.0% |
| ! | ATGAAAACTTGGTTTCAATA+CGG | + | chr4_1:27173846-27173865 | None:intergenic | 25.0% |
| ! | ATTCCTTATTCATCTAAACA+TGG | - | chr4_1:27174010-27174029 | Msa0542360:intron | 25.0% |
| ! | AAATATAACTGACAATGGAT+TGG | + | chr4_1:27174445-27174464 | None:intergenic | 25.0% |
| ! | AAGTTATGTAGCTAATGATA+CGG | + | chr4_1:27174505-27174524 | None:intergenic | 25.0% |
| ! | GATAGAGTTTAAACTTCAAA+AGG | + | chr4_1:27174537-27174556 | None:intergenic | 25.0% |
| ! | TATACTATCAGTTATTCAGT+TGG | - | chr4_1:27174666-27174685 | Msa0542360:intron | 25.0% |
| ! | ATACTATCAGTTATTCAGTT+GGG | - | chr4_1:27174667-27174686 | Msa0542360:intron | 25.0% |
| !!! | TCAAGAGAGCATATTTTTTT+TGG | + | chr4_1:27175195-27175214 | None:intergenic | 25.0% |
| !!! | ACATTGTTTTGATCTCAATT+TGG | + | chr4_1:27175255-27175274 | None:intergenic | 25.0% |
| ! | ATTAAACTCCCATAACATAA+AGG | - | chr4_1:27175697-27175716 | Msa0542360:intron | 25.0% |
| ! | TTAAACTCCCATAACATAAA+GGG | - | chr4_1:27175698-27175717 | Msa0542360:intron | 25.0% |
| ! | AAGTATTAGTTACTAGTTAG+TGG | - | chr4_1:27175959-27175978 | Msa0542360:intron | 25.0% |
| !! | TACAATAAAAGAGTACATCA+AGG | + | chr4_1:27176000-27176019 | None:intergenic | 25.0% |
| ! | TAACAAACTCTTTGTATTGA+TGG | + | chr4_1:27176050-27176069 | None:intergenic | 25.0% |
| ! | AAAAAGATGTGAGAAAACTA+AGG | + | chr4_1:27176178-27176197 | None:intergenic | 25.0% |
| ! | ATAAGGAAATAGAAGAAGAA+AGG | + | chr4_1:27176299-27176318 | None:intergenic | 25.0% |
| ! | AGGAAAATGGAAATTGAATA+AGG | + | chr4_1:27176316-27176335 | None:intergenic | 25.0% |
| !! | ATAATTTTCCCCAAATCTTA+GGG | - | chr4_1:27176406-27176425 | Msa0542360:CDS | 25.0% |
| ! | AATGAAATTGAATCAGGAAA+TGG | + | chr4_1:27176511-27176530 | None:intergenic | 25.0% |
| ! | GAGAAAATTAGAATAGTGAT+CGG | + | chr4_1:27176600-27176619 | None:intergenic | 25.0% |
| ! | ATACAACTTCTGAACAAAAA+AGG | + | chr4_1:27176820-27176839 | None:intergenic | 25.0% |
| !!! | AACATAACTTGTTAATGGAA+TGG | - | chr4_1:27177133-27177152 | Msa0542360:intron | 25.0% |
| !! | ATTTCTTTTCAGTTTGTGAA+TGG | - | chr4_1:27177347-27177366 | Msa0542360:intron | 25.0% |
| !!! | TTTTTACATCAGTAGTTTTG+TGG | - | chr4_1:27177413-27177432 | Msa0542360:intron | 25.0% |
| ! | AAGTATTAGTTACTAGTTAG+TGG | - | chr4_1:27175959-27175978 | Msa0542360:intron | 25.0% |
| !! | TACAATAAAAGAGTACATCA+AGG | + | chr4_1:27176000-27176019 | None:intergenic | 25.0% |
| ! | TAACAAACTCTTTGTATTGA+TGG | + | chr4_1:27176050-27176069 | None:intergenic | 25.0% |
| ! | TAAAATTATGTTAGTGGTCT+AGG | - | chr4_1:27179176-27179195 | Msa0542360:intron | 25.0% |
| ! | ATGCAATTGCTCTATTTATA+GGG | + | chr4_1:27179250-27179269 | None:intergenic | 25.0% |
| ! | AATGCAATTGCTCTATTTAT+AGG | + | chr4_1:27179251-27179270 | None:intergenic | 25.0% |
| ! | ATCATTTATTACGATATGCA+GGG | - | chr4_1:27179721-27179740 | Msa0542360:intron | 25.0% |
| !!! | ATATGCAGGGTTTTAAATAA+AGG | - | chr4_1:27179734-27179753 | Msa0542360:intron | 25.0% |
| ! | AATCAAAAACCGTTATATTG+CGG | + | chr4_1:27179780-27179799 | None:intergenic | 25.0% |
| !!! | GTAAAGATTTTTTACACTGT+CGG | + | chr4_1:27180115-27180134 | None:intergenic | 25.0% |
| ! | AACAAATACTTAAATGAGCA+TGG | + | chr4_1:27180367-27180386 | None:intergenic | 25.0% |
| !! | TACCACAATATCAAAGTTTT+CGG | + | chr4_1:27180653-27180672 | None:intergenic | 25.0% |
| !! | ATTGGAAAGTATGTTTCATA+TGG | + | chr4_1:27181798-27181817 | None:intergenic | 25.0% |
| ! | TAACTGTTTGAATCTTGAAT+CGG | + | chr4_1:27182234-27182253 | None:intergenic | 25.0% |
| ! | TCAGAAATTTATTAAAGCTG+TGG | - | chr4_1:27182379-27182398 | Msa0542360:intron | 25.0% |
| ! | CATCAAACTTTCTTTGAATT+TGG | - | chr4_1:27182432-27182451 | Msa0542360:intron | 25.0% |
| !! | ATAAGTTAGCTTCTTATACA+AGG | + | chr4_1:27182470-27182489 | None:intergenic | 25.0% |
| !! | CTTTTGATCTTTTATAGGAA+TGG | + | chr4_1:27182588-27182607 | None:intergenic | 25.0% |
| ! | CATTCCTATAAAAGATCAAA+AGG | - | chr4_1:27182586-27182605 | Msa0542360:intron | 25.0% |
| ! | ATTGTTTGAGAATTTGTCTA+AGG | + | chr4_1:27182681-27182700 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr4_1:27182889-27182908 | Msa0542360:intron | 25.0% |
| ! | AATCATAATTACGTCTTTGT+CGG | + | chr4_1:27183004-27183023 | None:intergenic | 25.0% |
| !! | GAATAGAAAGTATAAGAAGA+GGG | + | chr4_1:27183121-27183140 | None:intergenic | 25.0% |
| !! | AGAATAGAAAGTATAAGAAG+AGG | + | chr4_1:27183122-27183141 | None:intergenic | 25.0% |
| ! | CTGATTATGACAAGAAATAA+GGG | + | chr4_1:27183713-27183732 | None:intergenic | 25.0% |
| AAAGATACAAACCAAAACCA+AGG | - | chr4_1:27172175-27172194 | Msa0542360:three_prime_UTR | 30.0% | |
| !!! | GTTTTGAAAGGAAGAAAATG+AGG | + | chr4_1:27172201-27172220 | None:intergenic | 30.0% |
| TTTCCATTCATCTTCATTCA+TGG | - | chr4_1:27172267-27172286 | Msa0542360:three_prime_UTR | 30.0% | |
| ATTCCATGAATGAAGATGAA+TGG | + | chr4_1:27172273-27172292 | None:intergenic | 30.0% | |
| ATTCATGGAATCCTCAAATT+GGG | - | chr4_1:27172282-27172301 | Msa0542360:three_prime_UTR | 30.0% | |
| ATTTAGTGTGTTTAACCGTA+AGG | + | chr4_1:27172390-27172409 | None:intergenic | 30.0% | |
| !! | TGCAGTAAAATTTTGGTGTA+AGG | + | chr4_1:27172413-27172432 | None:intergenic | 30.0% |
| CAGCTCAAATTCTAAATTGT+TGG | - | chr4_1:27172510-27172529 | Msa0542360:CDS | 30.0% | |
| GAGTTCTATTATCTACAAAC+TGG | - | chr4_1:27172720-27172739 | Msa0542360:intron | 30.0% | |
| ACGGGGGAAAATTAATAAAA+AGG | - | chr4_1:27173010-27173029 | Msa0542360:intron | 30.0% | |
| CGGGGGAAAATTAATAAAAA+GGG | - | chr4_1:27173011-27173030 | Msa0542360:intron | 30.0% | |
| CAATAAATATCCAAAGGTTG+TGG | + | chr4_1:27173173-27173192 | None:intergenic | 30.0% | |
| ! | TCCATCATTTTGTATTGTCA+AGG | - | chr4_1:27173237-27173256 | Msa0542360:intron | 30.0% |
| ! | CCATCATTTTGTATTGTCAA+GGG | - | chr4_1:27173238-27173257 | Msa0542360:intron | 30.0% |
| GCTATAGTTGAGATCAATAT+TGG | - | chr4_1:27173294-27173313 | Msa0542360:CDS | 30.0% | |
| GTAAAAAATTAAACTCGAGG+AGG | - | chr4_1:27173528-27173547 | Msa0542360:intron | 30.0% | |
| ATTAGCATTTAATTGGACGT+TGG | - | chr4_1:27173683-27173702 | Msa0542360:intron | 30.0% | |
| ! | CGTTTAAATCCTTTGATGAT+AGG | + | chr4_1:27173789-27173808 | None:intergenic | 30.0% |
| ATCATCAAAGGATTTAAACG+TGG | - | chr4_1:27173789-27173808 | Msa0542360:intron | 30.0% | |
| GTTATATGACGATGAAAACT+TGG | + | chr4_1:27173857-27173876 | None:intergenic | 30.0% | |
| ! | AGTTTTCATCGTCATATAAC+AGG | - | chr4_1:27173857-27173876 | Msa0542360:intron | 30.0% |
| ! | GTTTTCATCGTCATATAACA+GGG | - | chr4_1:27173858-27173877 | Msa0542360:intron | 30.0% |
| ! | TTTTAGGCCTATTAGAATTG+GGG | + | chr4_1:27174264-27174283 | None:intergenic | 30.0% |
| !! | GTTTTAGGCCTATTAGAATT+GGG | + | chr4_1:27174265-27174284 | None:intergenic | 30.0% |
| !! | TGTTTTAGGCCTATTAGAAT+TGG | + | chr4_1:27174266-27174285 | None:intergenic | 30.0% |
| !!! | TTTTTTTTAGACCGATACCT+TGG | - | chr4_1:27174362-27174381 | Msa0542360:intron | 30.0% |
| !!! | TTTTTTTAGACCGATACCTT+GGG | - | chr4_1:27174363-27174382 | Msa0542360:intron | 30.0% |
| AATTATTTGAACCAGATGTG+TGG | + | chr4_1:27174791-27174810 | None:intergenic | 30.0% | |
| !! | ATGTATGTTTTTGACGTGTT+GGG | + | chr4_1:27174886-27174905 | None:intergenic | 30.0% |
| !! | TATGTATGTTTTTGACGTGT+TGG | + | chr4_1:27174887-27174906 | None:intergenic | 30.0% |
| CCTTAACCAAAACATCTTAT+AGG | + | chr4_1:27175289-27175308 | None:intergenic | 30.0% | |
| !!! | CCTATAAGATGTTTTGGTTA+AGG | - | chr4_1:27175286-27175305 | Msa0542360:intron | 30.0% |
| !!! | ATAAGATGTTTTGGTTAAGG+TGG | - | chr4_1:27175289-27175308 | Msa0542360:intron | 30.0% |
| !! | TTTTGGTTAAGGTGGAATAA+AGG | - | chr4_1:27175297-27175316 | Msa0542360:intron | 30.0% |
| TTTAAATTCCACAGGCAAAT+AGG | + | chr4_1:27175329-27175348 | None:intergenic | 30.0% | |
| TACAATTGGTTGTTATGTGT+TGG | - | chr4_1:27175495-27175514 | Msa0542360:intron | 30.0% | |
| ACAATTGGTTGTTATGTGTT+GGG | - | chr4_1:27175496-27175515 | Msa0542360:intron | 30.0% | |
| TAAACTCCCATAACATAAAG+GGG | - | chr4_1:27175699-27175718 | Msa0542360:intron | 30.0% | |
| TATTATAAAGTGGTGTAACC+AGG | - | chr4_1:27175790-27175809 | Msa0542360:intron | 30.0% | |
| TGATACCATGTTAAGAAACA+TGG | + | chr4_1:27176100-27176119 | None:intergenic | 30.0% | |
| ! | CATAATTTTCCCCAAATCTT+AGG | - | chr4_1:27176405-27176424 | Msa0542360:CDS | 30.0% |
| TCTCGAATGAAGAAACAAAA+CGG | + | chr4_1:27176462-27176481 | None:intergenic | 30.0% | |
| AGAACGAATGAAATTGAATC+AGG | + | chr4_1:27176517-27176536 | None:intergenic | 30.0% | |
| ! | ATTTTCTCCATTCTCTCATT+AGG | - | chr4_1:27176612-27176631 | Msa0542360:intron | 30.0% |
| AACAAATCCTAATGAGAGAA+TGG | + | chr4_1:27176622-27176641 | None:intergenic | 30.0% | |
| !!! | TGTTCAGAAGCATTTTTTTG+TGG | - | chr4_1:27176716-27176735 | Msa0542360:intron | 30.0% |
| CTGAAGTAACGAAGTAAAAT+GGG | + | chr4_1:27177028-27177047 | None:intergenic | 30.0% | |
| ACTGAAGTAACGAAGTAAAA+TGG | + | chr4_1:27177029-27177048 | None:intergenic | 30.0% | |
| !! | GTGTGAACATAACTTGTTAA+TGG | - | chr4_1:27177128-27177147 | Msa0542360:intron | 30.0% |
| !!! | CCTCTTTTTCAGAGATTTTA+CGG | - | chr4_1:27177303-27177322 | Msa0542360:intron | 30.0% |
| !!! | TACACATTTGTGCTACTTTT+TGG | - | chr4_1:27177437-27177456 | Msa0542360:intron | 30.0% |
| TAAAGAAAGGGAATCAAGTA+TGG | + | chr4_1:27177474-27177493 | None:intergenic | 30.0% | |
| ATGTAGAGCTCATAAAGAAA+GGG | + | chr4_1:27177486-27177505 | None:intergenic | 30.0% | |
| !! | TTGGATTGATTACTTTTCCT+TGG | - | chr4_1:27177581-27177600 | Msa0542360:intron | 30.0% |
| ! | TGTTTGGAGTACTTCATTAT+TGG | - | chr4_1:27177623-27177642 | Msa0542360:intron | 30.0% |
| AAGAAAAGAAATGCAAGGAA+AGG | + | chr4_1:27177853-27177872 | None:intergenic | 30.0% | |
| AAGACAAGAAAAGAAATGCA+AGG | + | chr4_1:27177858-27177877 | None:intergenic | 30.0% | |
| GCTATTATCATCAATCCATA+AGG | + | chr4_1:27178157-27178176 | None:intergenic | 30.0% | |
| TACTGCTTGAGATCAAATAT+TGG | - | chr4_1:27178308-27178327 | Msa0542360:intron | 30.0% | |
| ! | GATCAAATATTGGTTGGATT+TGG | - | chr4_1:27178318-27178337 | Msa0542360:intron | 30.0% |
| ! | AATATTGGTTGGATTTGGTT+AGG | - | chr4_1:27178323-27178342 | Msa0542360:intron | 30.0% |
| TGCTTACATATCTACTTTGT+TGG | - | chr4_1:27178359-27178378 | Msa0542360:intron | 30.0% | |
| !!! | AAGTTGTTTTGGTTAGTAGT+TGG | - | chr4_1:27178522-27178541 | Msa0542360:intron | 30.0% |
| !! | ATTTTGCAAGATGTTTCTGT+TGG | - | chr4_1:27178552-27178571 | Msa0542360:intron | 30.0% |
| ! | CACATCAACTACTATCTTTT+TGG | - | chr4_1:27178641-27178660 | Msa0542360:intron | 30.0% |
| !!! | GCATTTTAATTTCCTCTGTT+TGG | - | chr4_1:27178679-27178698 | Msa0542360:intron | 30.0% |
| TCTCTCTTTGTTAAGAAACA+TGG | + | chr4_1:27178942-27178961 | None:intergenic | 30.0% | |
| GATAAAAAATCAGAAGTCGT+GGG | + | chr4_1:27179058-27179077 | None:intergenic | 30.0% | |
| AGATAAAAAATCAGAAGTCG+TGG | + | chr4_1:27179059-27179078 | None:intergenic | 30.0% | |
| ATTGAAGTTTGAAGGATTTG+AGG | + | chr4_1:27179323-27179342 | None:intergenic | 30.0% | |
| CACATACTATTGAAGTTTGA+AGG | + | chr4_1:27179331-27179350 | None:intergenic | 30.0% | |
| TTCAATAGTATGTGCTAATG+TGG | - | chr4_1:27179337-27179356 | Msa0542360:intron | 30.0% | |
| ATAGTACATTTACGTATGGT+TGG | + | chr4_1:27179366-27179385 | None:intergenic | 30.0% | |
| AATGCAAGAAAGAACAGAAT+GGG | - | chr4_1:27179494-27179513 | Msa0542360:intron | 30.0% | |
| ! | TTAGGATTAGCAAAACTCAA+AGG | + | chr4_1:27179643-27179662 | None:intergenic | 30.0% |
| CTGCATATCGTAATAAATGA+TGG | + | chr4_1:27179722-27179741 | None:intergenic | 30.0% | |
| CATCATTTATTACGATATGC+AGG | - | chr4_1:27179720-27179739 | Msa0542360:intron | 30.0% | |
| !! | CTGTTTTTCCATTTGCATAT+TGG | + | chr4_1:27180281-27180300 | None:intergenic | 30.0% |
| CTGAACCTATCAATTTAAGA+TGG | + | chr4_1:27180445-27180464 | None:intergenic | 30.0% | |
| AGTTATGAACACATCTAACA+TGG | + | chr4_1:27180588-27180607 | None:intergenic | 30.0% | |
| TACCGAAAACTTTGATATTG+TGG | - | chr4_1:27180648-27180667 | Msa0542360:intron | 30.0% | |
| !!! | ATTTGTTTTTGTTCCGATGA+TGG | - | chr4_1:27180820-27180839 | Msa0542360:intron | 30.0% |
| ! | ATTCATTTCCTTTGGTGATA+TGG | - | chr4_1:27180917-27180936 | Msa0542360:intron | 30.0% |
| ! | TTCATTTCCTTTGGTGATAT+GGG | - | chr4_1:27180918-27180937 | Msa0542360:intron | 30.0% |
| ! | ACATCTTCAATTTGAAGTGT+CGG | - | chr4_1:27181173-27181192 | Msa0542360:intron | 30.0% |
| CTGTTCAAATTCAATCAAGA+TGG | + | chr4_1:27181218-27181237 | None:intergenic | 30.0% | |
| TAATATCAACTGAACATGAC+TGG | - | chr4_1:27181880-27181899 | Msa0542360:intron | 30.0% | |
| ! | TTTTTGTATTGCAGTATGAC+TGG | - | chr4_1:27182005-27182024 | Msa0542360:intron | 30.0% |
| CAATTCAGTTATTATGGTTC+CGG | + | chr4_1:27182202-27182221 | None:intergenic | 30.0% | |
| ATTCAAACAGTTAAACCATC+TGG | - | chr4_1:27182241-27182260 | Msa0542360:intron | 30.0% | |
| TTCTCTCATAATTATGCACA+TGG | + | chr4_1:27182535-27182554 | None:intergenic | 30.0% | |
| ! | ACTCCCTTTTGATCTTTTAT+AGG | + | chr4_1:27182593-27182612 | None:intergenic | 30.0% |
| CTTCTCAAACCTTTATATTG+CGG | - | chr4_1:27183042-27183061 | Msa0542360:intron | 30.0% | |
| ATAGACATAGGTCTAAATTG+CGG | + | chr4_1:27183087-27183106 | None:intergenic | 30.0% | |
| GAAGGATTAAGTATAGACAT+AGG | + | chr4_1:27183099-27183118 | None:intergenic | 30.0% | |
| GTATGAATGTTATGTTGCAT+TGG | - | chr4_1:27183202-27183221 | Msa0542360:CDS | 30.0% | |
| TTGAAAAGGATTTCTGAGTT+TGG | - | chr4_1:27183243-27183262 | Msa0542360:CDS | 30.0% | |
| ATCAGATACAAGAGAAGTTA+AGG | - | chr4_1:27183439-27183458 | Msa0542360:CDS | 30.0% | |
| AGAAACAAATGCAGAATTGT+AGG | - | chr4_1:27183507-27183526 | Msa0542360:CDS | 30.0% | |
| CCTGATTATGACAAGAAATA+AGG | + | chr4_1:27183714-27183733 | None:intergenic | 30.0% | |
| ! | CCTTATTTCTTGTCATAATC+AGG | - | chr4_1:27183711-27183730 | Msa0542360:five_prime_UTR | 30.0% |
| CTTTAAATAAGCTAGACCAT+AGG | + | chr4_1:27183810-27183829 | None:intergenic | 30.0% | |
| CATTCATGGAATCCTCAAAT+TGG | - | chr4_1:27172281-27172300 | Msa0542360:three_prime_UTR | 35.0% | |
| ATGTTTGAGAACCCAATTTG+AGG | + | chr4_1:27172296-27172315 | None:intergenic | 35.0% | |
| TAGACATTGAAGGGCTAATA+AGG | + | chr4_1:27172342-27172361 | None:intergenic | 35.0% | |
| GGAAAGTTGTAGACATTGAA+GGG | + | chr4_1:27172351-27172370 | None:intergenic | 35.0% | |
| TTGAAAGACATCATAAGCTG+CGG | + | chr4_1:27172931-27172950 | None:intergenic | 35.0% | |
| TTAATAAAAAGGGAGCAACG+AGG | - | chr4_1:27173021-27173040 | Msa0542360:intron | 35.0% | |
| ACGAGGATTCATGATATTGA+TGG | - | chr4_1:27173038-27173057 | Msa0542360:intron | 35.0% | |
| GATGGTTTCTAACAATAGCA+TGG | - | chr4_1:27173056-27173075 | Msa0542360:intron | 35.0% | |
| GAAGATAAGGTGGTTGAAAA+TGG | + | chr4_1:27173136-27173155 | None:intergenic | 35.0% | |
| AATTAACCTCGAAGATAAGG+TGG | + | chr4_1:27173146-27173165 | None:intergenic | 35.0% | |
| AAATATCCAAAGGTTGTGGT+GGG | + | chr4_1:27173169-27173188 | None:intergenic | 35.0% | |
| TAAATATCCAAAGGTTGTGG+TGG | + | chr4_1:27173170-27173189 | None:intergenic | 35.0% | |
| CCCTTGACAATACAAAATGA+TGG | + | chr4_1:27173241-27173260 | None:intergenic | 35.0% | |
| GTATATTGAAGGTGACAACT+TGG | + | chr4_1:27173445-27173464 | None:intergenic | 35.0% | |
| TGAAGATATACATGGAGGAA+AGG | + | chr4_1:27173719-27173738 | None:intergenic | 35.0% | |
| GTGTATGAAGATATACATGG+AGG | + | chr4_1:27173724-27173743 | None:intergenic | 35.0% | |
| AGCGTGTATGAAGATATACA+TGG | + | chr4_1:27173727-27173746 | None:intergenic | 35.0% | |
| !! | AGAGTATTGCCTATCATCAA+AGG | - | chr4_1:27173777-27173796 | Msa0542360:intron | 35.0% |
| TTTGATTGGGAGAACTAAGA+AGG | + | chr4_1:27173931-27173950 | None:intergenic | 35.0% | |
| CTTCTGACAGTATGTTTAAG+AGG | - | chr4_1:27173982-27174001 | Msa0542360:intron | 35.0% | |
| AAATCACTACCGTATACATG+AGG | - | chr4_1:27174186-27174205 | Msa0542360:CDS | 35.0% | |
| ! | TTTGAGGTTCCTCATGTATA+CGG | + | chr4_1:27174198-27174217 | None:intergenic | 35.0% |
| !!! | TTTTTTTGGATGGTGGTTTG+AGG | + | chr4_1:27174214-27174233 | None:intergenic | 35.0% |
| !!! | TAGGTGGATGTTTTTTTGGA+TGG | + | chr4_1:27174224-27174243 | None:intergenic | 35.0% |
| !!! | GTGTTAGGTGGATGTTTTTT+TGG | + | chr4_1:27174228-27174247 | None:intergenic | 35.0% |
| !!! | CTTTTGATTTTGGTGTTAGG+TGG | + | chr4_1:27174240-27174259 | None:intergenic | 35.0% |
| CACCTAACACCAAAATCAAA+AGG | - | chr4_1:27174238-27174257 | Msa0542360:intron | 35.0% | |
| !!! | CATCTCTGTTGTCTTGTTTT+AGG | + | chr4_1:27174280-27174299 | None:intergenic | 35.0% |
| AAGACAACAGAGATGAAAAG+TGG | - | chr4_1:27174285-27174304 | Msa0542360:intron | 35.0% | |
| TAGTACTTAGTGGTACTACT+GGG | - | chr4_1:27174328-27174347 | Msa0542360:intron | 35.0% | |
| !!! | TTTTTTAGACCGATACCTTG+GGG | - | chr4_1:27174364-27174383 | Msa0542360:intron | 35.0% |
| TCAACCGATTAAGATTCACA+CGG | - | chr4_1:27174555-27174574 | Msa0542360:intron | 35.0% | |
| TGATGTCTTTATCAATGCAG+TGG | - | chr4_1:27174740-27174759 | Msa0542360:intron | 35.0% | |
| GATGTCTTTATCAATGCAGT+GGG | - | chr4_1:27174741-27174760 | Msa0542360:intron | 35.0% | |
| ATGTCTTTATCAATGCAGTG+GGG | - | chr4_1:27174742-27174761 | Msa0542360:intron | 35.0% | |
| AATGAGATAGTACCTGTCAT+AGG | - | chr4_1:27175150-27175169 | Msa0542360:intron | 35.0% | |
| GAGATCAAAACAATGTTTCG+TGG | - | chr4_1:27175259-27175278 | Msa0542360:intron | 35.0% | |
| ! | GGCATTCCTATAAGATGTTT+TGG | - | chr4_1:27175280-27175299 | Msa0542360:intron | 35.0% |
| ! | TGTCCTCTTTTATCTCTTTG+CGG | + | chr4_1:27175727-27175746 | None:intergenic | 35.0% |
| ! | CACAAGTATTTTCCTTTAGG+TGG | + | chr4_1:27175834-27175853 | None:intergenic | 35.0% |
| ! | CCACACAAGTATTTTCCTTT+AGG | + | chr4_1:27175837-27175856 | None:intergenic | 35.0% |
| CCTAAAGGAAAATACTTGTG+TGG | - | chr4_1:27175834-27175853 | Msa0542360:intron | 35.0% | |
| TCTCTTCTATCCCATTTCTT+TGG | + | chr4_1:27175892-27175911 | None:intergenic | 35.0% | |
| ! | GTTAGTGGATGCCTATAAAT+AGG | - | chr4_1:27175974-27175993 | Msa0542360:intron | 35.0% |
| GTACATCAAGGCCTATTTAT+AGG | + | chr4_1:27175988-27176007 | None:intergenic | 35.0% | |
| ATAGTGAAAACTGACGAGAA+AGG | + | chr4_1:27176220-27176239 | None:intergenic | 35.0% | |
| AATTACGAACAGAATCACGA+AGG | + | chr4_1:27176368-27176387 | None:intergenic | 35.0% | |
| TCGTGATTCTGTTCGTAATT+TGG | - | chr4_1:27176368-27176387 | Msa0542360:CDS | 35.0% | |
| ATCGCAAAACCCTAAGATTT+GGG | + | chr4_1:27176418-27176437 | None:intergenic | 35.0% | |
| AATCGCAAAACCCTAAGATT+TGG | + | chr4_1:27176419-27176438 | None:intergenic | 35.0% | |
| GAACAATTCGATTTCGTGAT+TGG | - | chr4_1:27176482-27176501 | Msa0542360:CDS | 35.0% | |
| TGCGTAACACACAAAAAACT+TGG | + | chr4_1:27176684-27176703 | None:intergenic | 35.0% | |
| !!! | GTTTTTTGTGTGTTACGCAA+TGG | - | chr4_1:27176685-27176704 | Msa0542360:intron | 35.0% |
| !! | AACAGGTTCTGAACAAAAAC+AGG | + | chr4_1:27176749-27176768 | None:intergenic | 35.0% |
| !!! | CAGAAGCTTTTTTTGTTCAG+AGG | - | chr4_1:27176794-27176813 | Msa0542360:intron | 35.0% |
| !!! | CTTCAGAAGCTTCTTTTTTG+TGG | - | chr4_1:27176857-27176876 | Msa0542360:intron | 35.0% |
| !!! | TATGCTGTTTTTGTGTTCAG+AGG | - | chr4_1:27176985-27177004 | Msa0542360:intron | 35.0% |
| AAGTAACGAAGTAAAATGGG+AGG | + | chr4_1:27177025-27177044 | None:intergenic | 35.0% | |
| !! | TTTTCCCACTTTGAGTTTGA+GGG | - | chr4_1:27177096-27177115 | Msa0542360:intron | 35.0% |
| ! | CTTTTCCTGAGATTCGTATT+TGG | - | chr4_1:27177218-27177237 | Msa0542360:intron | 35.0% |
| ACAATCCAAATACGAATCTC+AGG | + | chr4_1:27177226-27177245 | None:intergenic | 35.0% | |
| ! | CCGTAAAATCTCTGAAAAAG+AGG | + | chr4_1:27177306-27177325 | None:intergenic | 35.0% |
| ! | ATGGTTTAGTGTTTGAAGCA+TGG | - | chr4_1:27177366-27177385 | Msa0542360:CDS | 35.0% |
| ! | TGGTTTAGTGTTTGAAGCAT+GGG | - | chr4_1:27177367-27177386 | Msa0542360:CDS | 35.0% |
| ATTGGGTTATTGTTTGCTTC+TGG | - | chr4_1:27177390-27177409 | Msa0542360:CDS | 35.0% | |
| !!! | ACATTTGTGCTACTTTTTGG+CGG | - | chr4_1:27177440-27177459 | Msa0542360:intron | 35.0% |
| CATGTAGAGCTCATAAAGAA+AGG | + | chr4_1:27177487-27177506 | None:intergenic | 35.0% | |
| CTTTCTTTATGAGCTCTACA+TGG | - | chr4_1:27177485-27177504 | Msa0542360:intron | 35.0% | |
| TTTGGTGAGGTTTATGATTC+TGG | - | chr4_1:27177532-27177551 | Msa0542360:intron | 35.0% | |
| ! | TTATGATTCTGGTCCAGTTT+TGG | - | chr4_1:27177543-27177562 | Msa0542360:intron | 35.0% |
| !!! | GAAGCATTGATTTTAGCCTA+TGG | - | chr4_1:27177645-27177664 | Msa0542360:intron | 35.0% |
| TGTTGATGCATTCAAACCAT+AGG | + | chr4_1:27177664-27177683 | None:intergenic | 35.0% | |
| ATGGTTTGAATGCATCAACA+TGG | - | chr4_1:27177664-27177683 | Msa0542360:intron | 35.0% | |
| TTGTTTGAAGACACATCACA+TGG | - | chr4_1:27177699-27177718 | Msa0542360:intron | 35.0% | |
| ACATGGCTATGCATCTATAT+TGG | - | chr4_1:27177716-27177735 | Msa0542360:intron | 35.0% | |
| !!! | GCTTTTTATCTTTGGAACCT+TGG | - | chr4_1:27177792-27177811 | Msa0542360:intron | 35.0% |
| TGATATGCTTCTGTCATGAA+TGG | - | chr4_1:27177908-27177927 | Msa0542360:intron | 35.0% | |
| AATCAACGCTTAACCATCAA+TGG | + | chr4_1:27178024-27178043 | None:intergenic | 35.0% | |
| CTTTGAGTATAGTTTCTGCT+TGG | - | chr4_1:27178117-27178136 | Msa0542360:intron | 35.0% | |
| ATGATAATAGCTTCTGCCTT+AGG | - | chr4_1:27178166-27178185 | Msa0542360:intron | 35.0% | |
| TGATAATAGCTTCTGCCTTA+GGG | - | chr4_1:27178167-27178186 | Msa0542360:intron | 35.0% | |
| CCATCAACAAAGCCAATAAA+GGG | + | chr4_1:27178208-27178227 | None:intergenic | 35.0% | |
| ACCATCAACAAAGCCAATAA+AGG | + | chr4_1:27178209-27178228 | None:intergenic | 35.0% | |
| AGTAACTAACCAAAGCCATA+AGG | + | chr4_1:27178292-27178311 | None:intergenic | 35.0% | |
| GCTTGAGATCAAATATTGGT+TGG | - | chr4_1:27178312-27178331 | Msa0542360:intron | 35.0% | |
| TATTGAGGTTATACATCTGC+TGG | - | chr4_1:27178498-27178517 | Msa0542360:intron | 35.0% | |
| TGATTGGAAGTCTTCTCTTA+TGG | - | chr4_1:27178590-27178609 | Msa0542360:intron | 35.0% | |
| ACAAAGTTAACACCAAACAG+AGG | + | chr4_1:27178694-27178713 | None:intergenic | 35.0% | |
| TTCTCTTACCTTGAGTTTGA+GGG | - | chr4_1:27178735-27178754 | Msa0542360:intron | 35.0% | |
| ! | GTTAGTGGATGCCTATAAAT+AGG | - | chr4_1:27175974-27175993 | Msa0542360:intron | 35.0% |
| GTACATCAAGGCCTATTTAT+AGG | + | chr4_1:27175988-27176007 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | - | chr4_1:27178954-27178973 | Msa0542360:intron | 35.0% | |
| GGTCTAGGAGATTAATTACT+TGG | - | chr4_1:27179191-27179210 | Msa0542360:intron | 35.0% | |
| !! | ACTTGGCTAGTCTTGATAAT+TGG | - | chr4_1:27179208-27179227 | Msa0542360:intron | 35.0% |
| GAAGGATTTGAGGAATCATA+AGG | + | chr4_1:27179313-27179332 | None:intergenic | 35.0% | |
| ! | TTTTTGCAGCTCATGTAATC+TGG | + | chr4_1:27179469-27179488 | None:intergenic | 35.0% |
| GAATGCAAGAAAGAACAGAA+TGG | - | chr4_1:27179493-27179512 | Msa0542360:intron | 35.0% | |
| ATAGAGTTTGTGTTCTTCAC+TGG | - | chr4_1:27179580-27179599 | Msa0542360:intron | 35.0% | |
| ATTAGCAAAACTCAAAGGAG+TGG | + | chr4_1:27179638-27179657 | None:intergenic | 35.0% | |
| ! | AATCCTAAGAAGCCACTTTA+TGG | - | chr4_1:27179655-27179674 | Msa0542360:intron | 35.0% |
| CTTGAGATATGTCCATAAAG+TGG | + | chr4_1:27179670-27179689 | None:intergenic | 35.0% | |
| AGATAATTGCGGTCAAATGT+GGG | + | chr4_1:27179843-27179862 | None:intergenic | 35.0% | |
| !!! | AGGGTTTTAAATAGAGATCG+CGG | + | chr4_1:27179902-27179921 | None:intergenic | 35.0% |
| TAAACTCTTTCATGTTCGGT+TGG | + | chr4_1:27179962-27179981 | None:intergenic | 35.0% | |
| !!! | GATTTGTGATTTTGAGACAG+TGG | + | chr4_1:27180019-27180038 | None:intergenic | 35.0% |
| !! | TTTGCATATTGGATTTGCTG+AGG | + | chr4_1:27180270-27180289 | None:intergenic | 35.0% |
| CAGCAAATCCAATATGCAAA+TGG | - | chr4_1:27180270-27180289 | Msa0542360:intron | 35.0% | |
| TTCATACCTTCCATATCTGT+AGG | + | chr4_1:27180561-27180580 | None:intergenic | 35.0% | |
| TCTAAATTGCGGTCTATAAC+TGG | + | chr4_1:27180693-27180712 | None:intergenic | 35.0% | |
| ! | CCATTAAATTAGTCTGCCAA+CGG | + | chr4_1:27180717-27180736 | None:intergenic | 35.0% |
| GAGCTCAAATTCATTTCCTT+TGG | - | chr4_1:27180909-27180928 | Msa0542360:intron | 35.0% | |
| TTCAGAAGAACACTACATTC+AGG | - | chr4_1:27180959-27180978 | Msa0542360:intron | 35.0% | |
| ACGCATTAAGAAATGACTAG+TGG | - | chr4_1:27181029-27181048 | Msa0542360:intron | 35.0% | |
| TTGATTGAATTTGAACAGCC+TGG | - | chr4_1:27181220-27181239 | Msa0542360:intron | 35.0% | |
| GAACTCCAACAATGTAAACT+CGG | - | chr4_1:27181279-27181298 | Msa0542360:intron | 35.0% | |
| AAACACCGAGTTTACATTGT+TGG | + | chr4_1:27181287-27181306 | None:intergenic | 35.0% | |
| !!! | AACTGGTTTTCTAGCAGAAT+GGG | - | chr4_1:27181330-27181349 | Msa0542360:intron | 35.0% |
| TTGAAGCTACTGGACTAATA+AGG | + | chr4_1:27181369-27181388 | None:intergenic | 35.0% | |
| TATGAAACTCTTGAAGCTAC+TGG | + | chr4_1:27181379-27181398 | None:intergenic | 35.0% | |
| GTTTCATACATGACAGCAAT+CGG | - | chr4_1:27181391-27181410 | Msa0542360:intron | 35.0% | |
| TTTCATACATGACAGCAATC+GGG | - | chr4_1:27181392-27181411 | Msa0542360:intron | 35.0% | |
| ATGTCATAAGCTATGAAGCA+CGG | + | chr4_1:27181681-27181700 | None:intergenic | 35.0% | |
| !! | TTCAGAGATTATGTCGATTC+TGG | - | chr4_1:27181729-27181748 | Msa0542360:intron | 35.0% |
| TTAATAGACAACGTACTCCT+TGG | - | chr4_1:27182050-27182069 | Msa0542360:intron | 35.0% | |
| AACAGTTAAACCATCTGGTT+TGG | - | chr4_1:27182246-27182265 | Msa0542360:intron | 35.0% | |
| TTTAGATGACAATCCGTTGT+TGG | + | chr4_1:27182357-27182376 | None:intergenic | 35.0% | |
| GTACATTGTGAACATGAAAC+AGG | - | chr4_1:27182490-27182509 | Msa0542360:intron | 35.0% | |
| ! | ATAGAAAAGAGTGCGATGAA+AGG | + | chr4_1:27182716-27182735 | None:intergenic | 35.0% |
| AAATTGAGGTTATAGCACAG+TGG | - | chr4_1:27182748-27182767 | Msa0542360:intron | 35.0% | |
| ! | AGAAAGTATAAGAAGAGGGA+AGG | + | chr4_1:27183117-27183136 | None:intergenic | 35.0% |
| ! | GAATGGTAATTTTGTGAGGT+TGG | + | chr4_1:27183335-27183354 | None:intergenic | 35.0% |
| ! | CAAGGAATGGTAATTTTGTG+AGG | + | chr4_1:27183339-27183358 | None:intergenic | 35.0% |
| TTCATATTATACCCCTACCT+AGG | - | chr4_1:27183754-27183773 | Msa0542360:five_prime_UTR | 35.0% | |
| TCATATTATACCCCTACCTA+GGG | - | chr4_1:27183755-27183774 | Msa0542360:five_prime_UTR | 35.0% | |
| ! | AGAAAATGAGGCCTTGGTTT+TGG | + | chr4_1:27172189-27172208 | None:intergenic | 40.0% |
| AAAGGAAGAAAATGAGGCCT+TGG | + | chr4_1:27172195-27172214 | None:intergenic | 40.0% | |
| GGGAAAGTTGTAGACATTGA+AGG | + | chr4_1:27172352-27172371 | None:intergenic | 40.0% | |
| AACTTTCCCTTCCTCAACTT+TGG | - | chr4_1:27172363-27172382 | Msa0542360:three_prime_UTR | 40.0% | |
| TAAGGTCCAAAGTTGAGGAA+GGG | + | chr4_1:27172372-27172391 | None:intergenic | 40.0% | |
| TTCCTCAACTTTGGACCTTA+CGG | - | chr4_1:27172372-27172391 | Msa0542360:three_prime_UTR | 40.0% | |
| TTTCAACCACCTTATCTTCG+AGG | - | chr4_1:27173137-27173156 | Msa0542360:intron | 40.0% | |
| GGGAATTAACCTCGAAGATA+AGG | + | chr4_1:27173149-27173168 | None:intergenic | 40.0% | |
| TTAATTCCCACCACAACCTT+TGG | - | chr4_1:27173160-27173179 | Msa0542360:intron | 40.0% | |
| AGGCAATACTCTCAATCACA+AGG | + | chr4_1:27173769-27173788 | None:intergenic | 40.0% | |
| !!! | CACATGTTTGGTTTTCTGGA+CGG | + | chr4_1:27173892-27173911 | None:intergenic | 40.0% |
| GTCCAGAAAACCAAACATGT+GGG | - | chr4_1:27173891-27173910 | Msa0542360:intron | 40.0% | |
| TCCAGAAAACCAAACATGTG+GGG | - | chr4_1:27173892-27173911 | Msa0542360:intron | 40.0% | |
| CGGCCATGTTTAGATGAATA+AGG | + | chr4_1:27174016-27174035 | None:intergenic | 40.0% | |
| AGCCTCTGGATTCGTAAAAA+CGG | + | chr4_1:27174036-27174055 | None:intergenic | 40.0% | |
| ! | TTTTTACGAATCCAGAGGCT+CGG | - | chr4_1:27174036-27174055 | Msa0542360:intron | 40.0% |
| !!! | GTGGATGTTTTTTTGGATGG+TGG | + | chr4_1:27174221-27174240 | None:intergenic | 40.0% |
| !!! | GGCCTTTTGATTTTGGTGTT+AGG | + | chr4_1:27174243-27174262 | None:intergenic | 40.0% |
| !!! | GAATTGGGGCCTTTTGATTT+TGG | + | chr4_1:27174250-27174269 | None:intergenic | 40.0% |
| CAAAAGGCCCCAATTCTAAT+AGG | - | chr4_1:27174254-27174273 | Msa0542360:intron | 40.0% | |
| AGAGATGAAAAGTGGAAACC+TGG | - | chr4_1:27174293-27174312 | Msa0542360:intron | 40.0% | |
| GAGATGAAAAGTGGAAACCT+GGG | - | chr4_1:27174294-27174313 | Msa0542360:intron | 40.0% | |
| AGATGAAAAGTGGAAACCTG+GGG | - | chr4_1:27174295-27174314 | Msa0542360:intron | 40.0% | |
| GTAGTACTTAGTGGTACTAC+TGG | - | chr4_1:27174327-27174346 | Msa0542360:intron | 40.0% | |
| TGCAAACCACTCAATGAAAC+TGG | + | chr4_1:27174394-27174413 | None:intergenic | 40.0% | |
| !! | AATGGATTGGTTCAGATGGA+GGG | + | chr4_1:27174432-27174451 | None:intergenic | 40.0% |
| !! | TGACAATGGATTGGTTCAGA+TGG | + | chr4_1:27174436-27174455 | None:intergenic | 40.0% |
| ACCAGATGTGTGGATATTGA+GGG | + | chr4_1:27174781-27174800 | None:intergenic | 40.0% | |
| AACCAGATGTGTGGATATTG+AGG | + | chr4_1:27174782-27174801 | None:intergenic | 40.0% | |
| AGATAGTACCTGTCATAGGA+GGG | - | chr4_1:27175154-27175173 | Msa0542360:intron | 40.0% | |
| GGTATATTCCTATTTGCCTG+TGG | - | chr4_1:27175318-27175337 | Msa0542360:intron | 40.0% | |
| TTGGTTGTTATGTGTTGGGA+TGG | - | chr4_1:27175500-27175519 | Msa0542360:intron | 40.0% | |
| GAAAATACTTGTGTGGACCA+GGG | - | chr4_1:27175841-27175860 | Msa0542360:intron | 40.0% | |
| TTGGTTGTGACCACACAATA+GGG | + | chr4_1:27175873-27175892 | None:intergenic | 40.0% | |
| TTTGGTTGTGACCACACAAT+AGG | + | chr4_1:27175874-27175893 | None:intergenic | 40.0% | |
| TGTGGTCACAACCAAAGAAA+TGG | - | chr4_1:27175878-27175897 | Msa0542360:intron | 40.0% | |
| GTGGTCACAACCAAAGAAAT+GGG | - | chr4_1:27175879-27175898 | Msa0542360:intron | 40.0% | |
| GTTAAGAAACATGGCATCCA+TGG | + | chr4_1:27176091-27176110 | None:intergenic | 40.0% | |
| GGATGCCATGTTTCTTAACA+TGG | - | chr4_1:27176092-27176111 | Msa0542360:intron | 40.0% | |
| ACATGGTATCAGAGCAAATC+TGG | - | chr4_1:27176109-27176128 | Msa0542360:intron | 40.0% | |
| AAATCTGGTATCCTCCTTGA+AGG | - | chr4_1:27176124-27176143 | Msa0542360:intron | 40.0% | |
| ! | ATTTTCTCGAGAAAACGCAG+CGG | + | chr4_1:27176155-27176174 | None:intergenic | 40.0% |
| ACGCAATTGAACGAGGAAAA+TGG | + | chr4_1:27176329-27176348 | None:intergenic | 40.0% | |
| ACAAAACACGCAATTGAACG+AGG | + | chr4_1:27176336-27176355 | None:intergenic | 40.0% | |
| TCGCAAAACCCTAAGATTTG+GGG | + | chr4_1:27176417-27176436 | None:intergenic | 40.0% | |
| !! | AACCTGTTTTGTTCAGAAGC+TGG | - | chr4_1:27176761-27176780 | Msa0542360:intron | 40.0% |
| AACCAGCTTCTGAACAAAAC+AGG | + | chr4_1:27176766-27176785 | None:intergenic | 40.0% | |
| ATGCTTCTGAACCACAAAGA+AGG | + | chr4_1:27176966-27176985 | None:intergenic | 40.0% | |
| !! | GTTTTCCCACTTTGAGTTTG+AGG | - | chr4_1:27177095-27177114 | Msa0542360:intron | 40.0% |
| ! | TTTCCCACTTTGAGTTTGAG+GGG | - | chr4_1:27177097-27177116 | Msa0542360:intron | 40.0% |
| GGATTGTGTTCATTTCTTCC+TGG | - | chr4_1:27177239-27177258 | Msa0542360:intron | 40.0% | |
| TGTTCATTTCTTCCTGGCTT+TGG | - | chr4_1:27177245-27177264 | Msa0542360:intron | 40.0% | |
| ! | GTTCATTTCTTCCTGGCTTT+GGG | - | chr4_1:27177246-27177265 | Msa0542360:intron | 40.0% |
| !! | TTCATTTCTTCCTGGCTTTG+GGG | - | chr4_1:27177247-27177266 | Msa0542360:intron | 40.0% |
| ! | TAGTGTTTGAAGCATGGGAT+TGG | - | chr4_1:27177372-27177391 | Msa0542360:CDS | 40.0% |
| ! | AGTGTTTGAAGCATGGGATT+GGG | - | chr4_1:27177373-27177392 | Msa0542360:CDS | 40.0% |
| CTCACCAAATACCAAACCAA+GGG | + | chr4_1:27177521-27177540 | None:intergenic | 40.0% | |
| ATCTTCCGACAATCCAAAAC+TGG | + | chr4_1:27177559-27177578 | None:intergenic | 40.0% | |
| TTGGATTGTCGGAAGATTCT+TGG | - | chr4_1:27177562-27177581 | Msa0542360:intron | 40.0% | |
| TTTCCTTGGTTTCTTTGTCC+TGG | - | chr4_1:27177595-27177614 | Msa0542360:intron | 40.0% | |
| !!! | TGTTCTTTTTTGTCTCGGCT+CGG | - | chr4_1:27177755-27177774 | Msa0542360:intron | 40.0% |
| !!! | AGGGCATCGCTTTTTATCTT+TGG | - | chr4_1:27177784-27177803 | Msa0542360:intron | 40.0% |
| TCTTGTGCTTCTGTTCATGA+TGG | - | chr4_1:27177874-27177893 | Msa0542360:intron | 40.0% | |
| CTTCTTGTAGCTTCTGTCAA+TGG | - | chr4_1:27177977-27177996 | Msa0542360:intron | 40.0% | |
| TGATTGCTTCTGCCTTTGAT+AGG | - | chr4_1:27178055-27178074 | Msa0542360:intron | 40.0% | |
| CAAGCTTAACCACCTATCAA+AGG | + | chr4_1:27178070-27178089 | None:intergenic | 40.0% | |
| TGAGTATAGTTTCTGCTTGG+TGG | - | chr4_1:27178120-27178139 | Msa0542360:intron | 40.0% | |
| ! | GTGGTTAAGCTTTTGCCTTA+TGG | - | chr4_1:27178139-27178158 | Msa0542360:intron | 40.0% |
| TTAAGCATGCTGCCCTTTAT+TGG | - | chr4_1:27178193-27178212 | Msa0542360:intron | 40.0% | |
| !! | CCCTTTATTGGCTTTGTTGA+TGG | - | chr4_1:27178205-27178224 | Msa0542360:intron | 40.0% |
| TGATGGTAGCTTCTGTTAAG+TGG | - | chr4_1:27178222-27178241 | Msa0542360:intron | 40.0% | |
| AGTGGTTAAGCCTAGAGTTA+TGG | - | chr4_1:27178240-27178259 | Msa0542360:intron | 40.0% | |
| TGAGCAAAAGCCATAACTCT+AGG | + | chr4_1:27178253-27178272 | None:intergenic | 40.0% | |
| ! | GAGTTATGGCTTTTGCTCAA+TGG | - | chr4_1:27178254-27178273 | Msa0542360:intron | 40.0% |
| ! | TGGTTAAGCGTTTTGCCTTA+TGG | - | chr4_1:27178274-27178293 | Msa0542360:intron | 40.0% |
| ! | TGGTTGGATTTGGTTAGGTT+TGG | - | chr4_1:27178328-27178347 | Msa0542360:intron | 40.0% |
| TGAATAACCAGTCCAGAACA+GGG | + | chr4_1:27178436-27178455 | None:intergenic | 40.0% | |
| ATGAATAACCAGTCCAGAAC+AGG | + | chr4_1:27178437-27178456 | None:intergenic | 40.0% | |
| ! | GACTGGTTATTCATACTTGC+TGG | - | chr4_1:27178443-27178462 | Msa0542360:intron | 40.0% |
| ! | CATCTGCTGGAAAGTTGTTT+TGG | - | chr4_1:27178511-27178530 | Msa0542360:intron | 40.0% |
| ! | TTGCAAGATGTTTCTGTTGG+AGG | - | chr4_1:27178555-27178574 | Msa0542360:intron | 40.0% |
| TTTCTGTTGGAGGAAACAAG+TGG | - | chr4_1:27178565-27178584 | Msa0542360:intron | 40.0% | |
| GAGGAAACAAGTGGTTTGAT+TGG | - | chr4_1:27178574-27178593 | Msa0542360:intron | 40.0% | |
| ! | GAGAACTCTTAGCTTGAGTT+TGG | + | chr4_1:27178720-27178739 | None:intergenic | 40.0% |
| GTTCTCTTACCTTGAGTTTG+AGG | - | chr4_1:27178734-27178753 | Msa0542360:intron | 40.0% | |
| AATAGTCTCCCTCAAACTCA+AGG | + | chr4_1:27178746-27178765 | None:intergenic | 40.0% | |
| GTTAAGAAACATGGCATCCA+TGG | + | chr4_1:27176091-27176110 | None:intergenic | 40.0% | |
| TGTCCATAAAGTGGCTTCTT+AGG | + | chr4_1:27179661-27179680 | None:intergenic | 40.0% | |
| !!! | GGGTTTTAAATAAAGGTCCG+CGG | - | chr4_1:27179741-27179760 | Msa0542360:intron | 40.0% |
| AAACTTGGGCCGCAATATAA+CGG | - | chr4_1:27179768-27179787 | Msa0542360:intron | 40.0% | |
| CAGATAATTGCGGTCAAATG+TGG | + | chr4_1:27179844-27179863 | None:intergenic | 40.0% | |
| CCTTAGACTGCAGATAATTG+CGG | + | chr4_1:27179854-27179873 | None:intergenic | 40.0% | |
| CGCAATTATCTGCAGTCTAA+GGG | - | chr4_1:27179852-27179871 | Msa0542360:intron | 40.0% | |
| !! | TGTATGCGTGGTCATTTTGT+CGG | + | chr4_1:27180174-27180193 | None:intergenic | 40.0% |
| ! | AGATTCTGATGATGTATGCG+TGG | + | chr4_1:27180186-27180205 | None:intergenic | 40.0% |
| TGTTGCAGATGAGATTGACA+TGG | - | chr4_1:27180226-27180245 | Msa0542360:intron | 40.0% | |
| GTTGCAGATGAGATTGACAT+GGG | - | chr4_1:27180227-27180246 | Msa0542360:intron | 40.0% | |
| !! | ATGAGATTGACATGGGTTAG+TGG | - | chr4_1:27180234-27180253 | Msa0542360:intron | 40.0% |
| !! | TGAGATTGACATGGGTTAGT+GGG | - | chr4_1:27180235-27180254 | Msa0542360:intron | 40.0% |
| ATCATGCCATCCAAAATCCT+TGG | + | chr4_1:27180483-27180502 | None:intergenic | 40.0% | |
| ATCCATTCAGCACTTATGAC+TGG | - | chr4_1:27180512-27180531 | Msa0542360:intron | 40.0% | |
| CCGTTGGCAGACTAATTTAA+TGG | - | chr4_1:27180714-27180733 | Msa0542360:intron | 40.0% | |
| CCGATTTACTAGACCATCAT+CGG | + | chr4_1:27180836-27180855 | None:intergenic | 40.0% | |
| ! | CCGATGATGGTCTAGTAAAT+CGG | - | chr4_1:27180833-27180852 | Msa0542360:intron | 40.0% |
| AGCTGGTGGAGTTGAAAATT+TGG | + | chr4_1:27180877-27180896 | None:intergenic | 40.0% | |
| ! | AAATTTTCAACTCCACCAGC+TGG | - | chr4_1:27180876-27180895 | Msa0542360:intron | 40.0% |
| ! | GGTTTTTCCCATATCACCAA+AGG | + | chr4_1:27180928-27180947 | None:intergenic | 40.0% |
| !! | TTCTTCTGAAGCATCAAGAG+GGG | + | chr4_1:27180949-27180968 | None:intergenic | 40.0% |
| !! | GTTCTTCTGAAGCATCAAGA+GGG | + | chr4_1:27180950-27180969 | None:intergenic | 40.0% |
| !! | TGTTCTTCTGAAGCATCAAG+AGG | + | chr4_1:27180951-27180970 | None:intergenic | 40.0% |
| ! | TTGATAACTGATAGTGCTCC+AGG | + | chr4_1:27181241-27181260 | None:intergenic | 40.0% |
| !! | GTAAACTCGGTGTTTCACAT+TGG | - | chr4_1:27181292-27181311 | Msa0542360:intron | 40.0% |
| GGAGACATAAGTTATGCAAC+TGG | - | chr4_1:27181313-27181332 | Msa0542360:intron | 40.0% | |
| !!! | CAACTGGTTTTCTAGCAGAA+TGG | - | chr4_1:27181329-27181348 | Msa0542360:intron | 40.0% |
| GACTTATGACCTATGAAGCA+CGG | - | chr4_1:27181483-27181502 | Msa0542360:intron | 40.0% | |
| ! | TTACAAGTGTCGCTATGTGT+CGG | - | chr4_1:27181589-27181608 | Msa0542360:intron | 40.0% |
| GTTTATGTTACTCCTGACTC+TGG | - | chr4_1:27181756-27181775 | Msa0542360:intron | 40.0% | |
| ! | CCTTGTTCAATAGAGTACCA+AGG | + | chr4_1:27181843-27181862 | None:intergenic | 40.0% |
| CCTTGGTACTCTATTGAACA+AGG | - | chr4_1:27181840-27181859 | Msa0542360:intron | 40.0% | |
| GCAGTATGACTGGATGAAAA+AGG | - | chr4_1:27182015-27182034 | Msa0542360:intron | 40.0% | |
| TGACTGGATGAAAAAGGACA+TGG | - | chr4_1:27182021-27182040 | Msa0542360:intron | 40.0% | |
| !! | TACTCCTTGGCTGATTTTCA+TGG | - | chr4_1:27182063-27182082 | Msa0542360:intron | 40.0% |
| !! | ACTCCTTGGCTGATTTTCAT+GGG | - | chr4_1:27182064-27182083 | Msa0542360:intron | 40.0% |
| AACTAGACAACAAACTCGTG+AGG | - | chr4_1:27182138-27182157 | Msa0542360:intron | 40.0% | |
| TATTATGGTTCCGGTTCAAG+CGG | + | chr4_1:27182193-27182212 | None:intergenic | 40.0% | |
| AAATGCTGAACCAAACCAGA+TGG | + | chr4_1:27182259-27182278 | None:intergenic | 40.0% | |
| CCAATGTACACTTCCAACAA+CGG | - | chr4_1:27182341-27182360 | Msa0542360:intron | 40.0% | |
| ! | GCCATTGCTGTTACAGAATA+AGG | - | chr4_1:27182403-27182422 | Msa0542360:intron | 40.0% |
| ! | GCCTTATTCTGTAACAGCAA+TGG | + | chr4_1:27182407-27182426 | None:intergenic | 40.0% |
| ! | GAACATGAAACAGGTTGACT+TGG | - | chr4_1:27182499-27182518 | Msa0542360:intron | 40.0% |
| !!! | CAGGTTGACTTGGTTCTTTT+TGG | - | chr4_1:27182509-27182528 | Msa0542360:intron | 40.0% |
| CAATAGTGGCCGCAATATAA+AGG | + | chr4_1:27183054-27183073 | None:intergenic | 40.0% | |
| ! | GAATGTTATGTTGCATTGGC+AGG | - | chr4_1:27183206-27183225 | Msa0542360:CDS | 40.0% |
| GATGTCACAAACTGCAATGA+AGG | + | chr4_1:27183422-27183441 | None:intergenic | 40.0% | |
| GTAAGGTCCAAAGTTGAGGA+AGG | + | chr4_1:27172373-27172392 | None:intergenic | 45.0% | |
| AACCGTAAGGTCCAAAGTTG+AGG | + | chr4_1:27172377-27172396 | None:intergenic | 45.0% | |
| GTTGGATGAGGAGTTTGTCA+CGG | - | chr4_1:27172528-27172547 | Msa0542360:intron | 45.0% | |
| GAAACCGAGAGATGGAGATT+GGG | - | chr4_1:27172570-27172589 | Msa0542360:intron | 45.0% | |
| GACATACCTTGACAGGGTAA+TGG | + | chr4_1:27172773-27172792 | None:intergenic | 45.0% | |
| GTGCATGACATACCTTGACA+GGG | + | chr4_1:27172779-27172798 | None:intergenic | 45.0% | |
| TGTGCATGACATACCTTGAC+AGG | + | chr4_1:27172780-27172799 | None:intergenic | 45.0% | |
| TACATGGAGGAAAGGCTATG+TGG | + | chr4_1:27173711-27173730 | None:intergenic | 45.0% | |
| CGTCCAGAAAACCAAACATG+TGG | - | chr4_1:27173890-27173909 | Msa0542360:intron | 45.0% | |
| CCAGAAAACCAAACATGTGG+GGG | - | chr4_1:27173893-27173912 | Msa0542360:intron | 45.0% | |
| CAGAAAACCAAACATGTGGG+GGG | - | chr4_1:27173894-27173913 | Msa0542360:intron | 45.0% | |
| ! | AGTAGTGGGGTAGTACTTAG+TGG | - | chr4_1:27174318-27174337 | Msa0542360:intron | 45.0% |
| !! | CAATGGATTGGTTCAGATGG+AGG | + | chr4_1:27174433-27174452 | None:intergenic | 45.0% |
| CCGTCCGTGTGAATCTTAAT+CGG | + | chr4_1:27174562-27174581 | None:intergenic | 45.0% | |
| CCGATTAAGATTCACACGGA+CGG | - | chr4_1:27174559-27174578 | Msa0542360:intron | 45.0% | |
| CGTCGACATAAACAGCTCTA+TGG | + | chr4_1:27174704-27174723 | None:intergenic | 45.0% | |
| TCCCTCAATATCCACACATC+TGG | - | chr4_1:27174777-27174796 | Msa0542360:intron | 45.0% | |
| GATCGTAATGTCGTCACATG+AGG | + | chr4_1:27174939-27174958 | None:intergenic | 45.0% | |
| GAGATAGTACCTGTCATAGG+AGG | - | chr4_1:27175153-27175172 | Msa0542360:intron | 45.0% | |
| GTGCCGCAAAGAGATAAAAG+AGG | - | chr4_1:27175721-27175740 | Msa0542360:intron | 45.0% | |
| GTGTAACCAGGACAAACCAA+AGG | - | chr4_1:27175802-27175821 | Msa0542360:intron | 45.0% | |
| ACCAGGACAAACCAAAGGTT+TGG | - | chr4_1:27175807-27175826 | Msa0542360:intron | 45.0% | |
| !! | TCCAAACCTTTGGTTTGTCC+TGG | + | chr4_1:27175811-27175830 | None:intergenic | 45.0% |
| CTTTAGGTGGTCCAAACCTT+TGG | + | chr4_1:27175821-27175840 | None:intergenic | 45.0% | |
| CAAAGGTTTGGACCACCTAA+AGG | - | chr4_1:27175819-27175838 | Msa0542360:intron | 45.0% | |
| GGAAAATACTTGTGTGGACC+AGG | - | chr4_1:27175840-27175859 | Msa0542360:intron | 45.0% | |
| TGTGACCACACAATAGGGTT+TGG | + | chr4_1:27175868-27175887 | None:intergenic | 45.0% | |
| ! | GCTTTTCTCTCCTTCATCCA+TGG | - | chr4_1:27176071-27176090 | Msa0542360:intron | 45.0% |
| AACATGGCATCCATGGATGA+AGG | + | chr4_1:27176084-27176103 | None:intergenic | 45.0% | |
| GAACAAAGACGAACTCACGA+CGG | + | chr4_1:27176254-27176273 | None:intergenic | 45.0% | |
| CGGAAACTGCGAAATCGAAT+TGG | + | chr4_1:27176442-27176461 | None:intergenic | 45.0% | |
| CTCTTCAGAAGCCTTCTTTG+TGG | - | chr4_1:27176952-27176971 | Msa0542360:intron | 45.0% | |
| ! | TTCCCACTTTGAGTTTGAGG+GGG | - | chr4_1:27177098-27177117 | Msa0542360:intron | 45.0% |
| ! | AATGGAATGGCACTGAAGCA+AGG | - | chr4_1:27177146-27177165 | Msa0542360:intron | 45.0% |
| ACTCTGTATGTGCCAAGTTG+TGG | - | chr4_1:27177185-27177204 | Msa0542360:intron | 45.0% | |
| ! | TGCCAAGTTGTGGATTGTCA+TGG | - | chr4_1:27177195-27177214 | Msa0542360:intron | 45.0% |
| AGCCATGACAATCCACAACT+TGG | + | chr4_1:27177200-27177219 | None:intergenic | 45.0% | |
| !! | CATGCCCTTGGTTTGGTATT+TGG | - | chr4_1:27177514-27177533 | Msa0542360:intron | 45.0% |
| CCTCACCAAATACCAAACCA+AGG | + | chr4_1:27177522-27177541 | None:intergenic | 45.0% | |
| !! | CCTTGGTTTGGTATTTGGTG+AGG | - | chr4_1:27177519-27177538 | Msa0542360:intron | 45.0% |
| !!! | CTGGTCCAGTTTTGGATTGT+CGG | - | chr4_1:27177551-27177570 | Msa0542360:intron | 45.0% |
| GATCCAGGACAAAGAAACCA+AGG | + | chr4_1:27177601-27177620 | None:intergenic | 45.0% | |
| CTTTGTCCTGGATCGTTGTT+TGG | - | chr4_1:27177607-27177626 | Msa0542360:intron | 45.0% | |
| AGTACTCCAAACAACGATCC+AGG | + | chr4_1:27177616-27177635 | None:intergenic | 45.0% | |
| GGAGGTCATATACAAGACCA+AGG | + | chr4_1:27177812-27177831 | None:intergenic | 45.0% | |
| CCATAGTCTACAATGGAAGG+AGG | + | chr4_1:27177830-27177849 | None:intergenic | 45.0% | |
| CCTCCTTCCATTGTAGACTA+TGG | - | chr4_1:27177827-27177846 | Msa0542360:intron | 45.0% | |
| AGGCCATAGTCTACAATGGA+AGG | + | chr4_1:27177833-27177852 | None:intergenic | 45.0% | |
| GGAAAGGCCATAGTCTACAA+TGG | + | chr4_1:27177837-27177856 | None:intergenic | 45.0% | |
| AAACGACGCTTAACCATCCT+TGG | + | chr4_1:27177953-27177972 | None:intergenic | 45.0% | |
| CGTGACACTTCTTCCATTGA+TGG | - | chr4_1:27178008-27178027 | Msa0542360:intron | 45.0% | |
| TTGCTTCTGCCTTTGATAGG+TGG | - | chr4_1:27178058-27178077 | Msa0542360:intron | 45.0% | |
| GTTGTTGTGCTTCTGTCAAG+TGG | - | chr4_1:27178089-27178108 | Msa0542360:intron | 45.0% | |
| TAATAGCTTCTGCCTTAGGG+TGG | - | chr4_1:27178170-27178189 | Msa0542360:intron | 45.0% | |
| ! | AGCGTTTTGCCTTATGGCTT+TGG | - | chr4_1:27178280-27178299 | Msa0542360:intron | 45.0% |
| ! | GTTTTCCTTGCCTACACCTT+TGG | - | chr4_1:27178405-27178424 | Msa0542360:intron | 45.0% |
| ! | GCTTTTCTCTCCTTCATCCA+TGG | - | chr4_1:27176071-27176090 | Msa0542360:intron | 45.0% |
| AACATGGCATCCATGGATGA+AGG | + | chr4_1:27176084-27176103 | None:intergenic | 45.0% | |
| TGTGACCAAACCCAATTGTG+TGG | - | chr4_1:27179009-27179028 | Msa0542360:intron | 45.0% | |
| TGCAGTGTGACAACTTGTAG+TGG | - | chr4_1:27179520-27179539 | Msa0542360:intron | 45.0% | |
| GAGTTTGTGTTCTTCACTGG+TGG | - | chr4_1:27179583-27179602 | Msa0542360:intron | 45.0% | |
| ATGTGACGCACTTGCAAATG+AGG | - | chr4_1:27179809-27179828 | Msa0542360:intron | 45.0% | |
| CCGCAATTATCTGCAGTCTA+AGG | - | chr4_1:27179851-27179870 | Msa0542360:intron | 45.0% | |
| !! | GGTCATTTTGTCGGTATGTG+TGG | + | chr4_1:27180165-27180184 | None:intergenic | 45.0% |
| !! | GAGATTGACATGGGTTAGTG+GGG | - | chr4_1:27180236-27180255 | Msa0542360:intron | 45.0% |
| ! | GATTTTGGATGGCATGATCC+AGG | - | chr4_1:27180485-27180504 | Msa0542360:intron | 45.0% |
| ! | AGTGCTGAATGGATGAATCC+TGG | + | chr4_1:27180506-27180525 | None:intergenic | 45.0% |
| !! | GTCCAGTCATAAGTGCTGAA+TGG | + | chr4_1:27180517-27180536 | None:intergenic | 45.0% |
| AGTGCCTACTCCTACAGATA+TGG | - | chr4_1:27180548-27180567 | Msa0542360:intron | 45.0% | |
| CCTTCCATATCTGTAGGAGT+AGG | + | chr4_1:27180555-27180574 | None:intergenic | 45.0% | |
| CCTACTCCTACAGATATGGA+AGG | - | chr4_1:27180552-27180571 | Msa0542360:intron | 45.0% | |
| ! | AGACCGCAATTTAGAACCGT+TGG | - | chr4_1:27180698-27180717 | Msa0542360:intron | 45.0% |
| !! | CTGCCAACGGTTCTAAATTG+CGG | + | chr4_1:27180704-27180723 | None:intergenic | 45.0% |
| GGTCTAGTAAATCGGCTGAT+TGG | - | chr4_1:27180841-27180860 | Msa0542360:intron | 45.0% | |
| GTCGATGTCAGACACAATAC+TGG | + | chr4_1:27181132-27181151 | None:intergenic | 45.0% | |
| TGACCTATGAAGCACGGATA+CGG | - | chr4_1:27181489-27181508 | Msa0542360:intron | 45.0% | |
| TATGTTACTCCTGACTCTGG+TGG | - | chr4_1:27181759-27181778 | Msa0542360:intron | 45.0% | |
| CTGGTCTGAAAATTCTGAGC+AGG | - | chr4_1:27181899-27181918 | Msa0542360:intron | 45.0% | |
| !! | CTCCTTGGCTGATTTTCATG+GGG | - | chr4_1:27182065-27182084 | Msa0542360:intron | 45.0% |
| TACCCCATGAAAATCAGCCA+AGG | + | chr4_1:27182070-27182089 | None:intergenic | 45.0% | |
| ! | CCGTTGTTGGAAGTGTACAT+TGG | + | chr4_1:27182344-27182363 | None:intergenic | 45.0% |
| ATGCCAATGACAGCATGTAC+AGG | + | chr4_1:27182647-27182666 | None:intergenic | 45.0% | |
| TGTACATGCTGTCATTGGCA+TGG | - | chr4_1:27182646-27182665 | Msa0542360:intron | 45.0% | |
| !! | TATATGTGTCGGTGTCGTGT+CGG | - | chr4_1:27182900-27182919 | Msa0542360:intron | 45.0% |
| CGTCAGACATGACATATGTC+CGG | - | chr4_1:27182923-27182942 | Msa0542360:intron | 45.0% | |
| GGTTTGAGAAGTCTCAGCAA+CGG | + | chr4_1:27183033-27183052 | None:intergenic | 45.0% | |
| GCGGTATGCATTTGCAATAG+TGG | + | chr4_1:27183068-27183087 | None:intergenic | 45.0% | |
| TATTATACCCCTACCTAGGG+TGG | - | chr4_1:27183758-27183777 | Msa0542360:five_prime_UTR | 45.0% | |
| ATTATACCCCTACCTAGGGT+GGG | - | chr4_1:27183759-27183778 | Msa0542360:five_prime_UTR | 45.0% | |
| !!! | TTTCAAATTATTATTTTTTT+TGG | - | chr4_1:27172945-27172964 | Msa0542360:intron | 5.0% |
| !! | AAAATATGATAAAAAAATTA+AGG | + | chr4_1:27174983-27175002 | None:intergenic | 5.0% |
| TTTGTCACGGTTACCGTCAC+CGG | - | chr4_1:27172541-27172560 | Msa0542360:intron | 50.0% | |
| ATCTCTCGGTTTCGAAACGC+CGG | + | chr4_1:27172563-27172582 | None:intergenic | 50.0% | |
| CGAAACCGAGAGATGGAGAT+TGG | - | chr4_1:27172569-27172588 | Msa0542360:intron | 50.0% | |
| ! | ACAGGGTAATGGCAAAGCAG+AGG | + | chr4_1:27172762-27172781 | None:intergenic | 50.0% |
| GCTTTGCCATTACCCTGTCA+AGG | - | chr4_1:27172764-27172783 | Msa0542360:intron | 50.0% | |
| CTCGAGGAGGCTTCATTTAG+AGG | - | chr4_1:27173541-27173560 | Msa0542360:intron | 50.0% | |
| !!! | CCCCCACATGTTTGGTTTTC+TGG | + | chr4_1:27173896-27173915 | None:intergenic | 50.0% |
| ATATGTGCCCCCCACATGTT+TGG | + | chr4_1:27173904-27173923 | None:intergenic | 50.0% | |
| !!! | GGCCGTTTTTACGAATCCAG+AGG | - | chr4_1:27174031-27174050 | Msa0542360:intron | 50.0% |
| TACTTACAGAACCGAGCCTC+TGG | + | chr4_1:27174050-27174069 | None:intergenic | 50.0% | |
| TTTAGACCGATACCTTGGGG+AGG | - | chr4_1:27174367-27174386 | Msa0542360:intron | 50.0% | |
| AATGAAACTGGACCTCCCCA+AGG | + | chr4_1:27174382-27174401 | None:intergenic | 50.0% | |
| GGAGGTCCAGTTTCATTGAG+TGG | - | chr4_1:27174385-27174404 | Msa0542360:intron | 50.0% | |
| TCACACGGACGGTATATGCA+TGG | - | chr4_1:27174570-27174589 | Msa0542360:intron | 50.0% | |
| TATCAATGCAGTGGGGACTC+TGG | - | chr4_1:27174749-27174768 | Msa0542360:intron | 50.0% | |
| TACCTGTCATAGGAGGGACA+TGG | - | chr4_1:27175160-27175179 | Msa0542360:intron | 50.0% | |
| GCGGCACCCCTTTATGTTAT+GGG | + | chr4_1:27175708-27175727 | None:intergenic | 50.0% | |
| TGCGGCACCCCTTTATGTTA+TGG | + | chr4_1:27175709-27175728 | None:intergenic | 50.0% | |
| ! | ACACAATAGGGTTTGGTCCC+TGG | + | chr4_1:27175861-27175880 | None:intergenic | 50.0% |
| AGGGACCAAACCCTATTGTG+TGG | - | chr4_1:27175860-27175879 | Msa0542360:intron | 50.0% | |
| CAGCGGAAAATCCTTCAAGG+AGG | + | chr4_1:27176138-27176157 | None:intergenic | 50.0% | |
| ACGCAGCGGAAAATCCTTCA+AGG | + | chr4_1:27176141-27176160 | None:intergenic | 50.0% | |
| GTCCCCCTCAAACTCAAAGT+GGG | + | chr4_1:27177103-27177122 | None:intergenic | 50.0% | |
| TGTCCCCCTCAAACTCAAAG+TGG | + | chr4_1:27177104-27177123 | None:intergenic | 50.0% | |
| ATTCCATCTACCCCAAAGCC+AGG | + | chr4_1:27177260-27177279 | None:intergenic | 50.0% | |
| ACATGGCACTTTCATGCCCT+TGG | - | chr4_1:27177502-27177521 | Msa0542360:intron | 50.0% | |
| GCACTTTCATGCCCTTGGTT+TGG | - | chr4_1:27177507-27177526 | Msa0542360:intron | 50.0% | |
| ! | AAGCGTTGTGCTTCTGTCCA+AGG | - | chr4_1:27177933-27177952 | Msa0542360:intron | 50.0% |
| GTTGTGCTTCTGTCCAAGGA+TGG | - | chr4_1:27177937-27177956 | Msa0542360:intron | 50.0% | |
| CAGCATGCTTAACCACCCTA+AGG | + | chr4_1:27178185-27178204 | None:intergenic | 50.0% | |
| ! | AGGTACCAAAGGTGTAGGCA+AGG | + | chr4_1:27178413-27178432 | None:intergenic | 50.0% |
| ATAACCAGTCCAGAACAGGG+AGG | + | chr4_1:27178433-27178452 | None:intergenic | 50.0% | |
| CAGGACCACACAATTGGGTT+TGG | + | chr4_1:27179017-27179036 | None:intergenic | 50.0% | |
| CAAACCCAATTGTGTGGTCC+TGG | - | chr4_1:27179015-27179034 | Msa0542360:intron | 50.0% | |
| TGGACCAGGACCACACAATT+GGG | + | chr4_1:27179022-27179041 | None:intergenic | 50.0% | |
| GAGAAAGACTTGTGTGGACC+AGG | + | chr4_1:27179036-27179055 | None:intergenic | 50.0% | |
| TCGTGGGAGAAAGACTTGTG+TGG | + | chr4_1:27179042-27179061 | None:intergenic | 50.0% | |
| AAGGAGTGGACCTTCCAACA+AGG | + | chr4_1:27179624-27179643 | None:intergenic | 50.0% | |
| AAGGTCCGCGGTTTCAAACT+TGG | - | chr4_1:27179753-27179772 | Msa0542360:intron | 50.0% | |
| AGGTCCGCGGTTTCAAACTT+GGG | - | chr4_1:27179754-27179773 | Msa0542360:intron | 50.0% | |
| CCAAAATCCTTGGCAGGACT+AGG | + | chr4_1:27180473-27180492 | None:intergenic | 50.0% | |
| ! | CCTAGTCCTGCCAAGGATTT+TGG | - | chr4_1:27180470-27180489 | Msa0542360:intron | 50.0% |
| ! | GTCCTGCCAAGGATTTTGGA+TGG | - | chr4_1:27180474-27180493 | Msa0542360:intron | 50.0% |
| TGCCATCCAAAATCCTTGGC+AGG | + | chr4_1:27180479-27180498 | None:intergenic | 50.0% | |
| CTGTAGGAGTAGGCACTTGA+CGG | + | chr4_1:27180545-27180564 | None:intergenic | 50.0% | |
| ! | TTTTCAACTCCACCAGCTGG+AGG | - | chr4_1:27180879-27180898 | Msa0542360:intron | 50.0% |
| CAGCAATCGGGAATCATGAG+AGG | - | chr4_1:27181404-27181423 | Msa0542360:intron | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | + | chr4_1:27181495-27181514 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | - | chr4_1:27181495-27181514 | Msa0542360:intron | 50.0% | |
| TCCAATGCCAACTGCAGCAA+AGG | - | chr4_1:27181812-27181831 | Msa0542360:intron | 50.0% | |
| TCCTTTGCTGCAGTTGGCAT+TGG | + | chr4_1:27181816-27181835 | None:intergenic | 50.0% | |
| GGCTTATCCTTTGCTGCAGT+TGG | + | chr4_1:27181822-27181841 | None:intergenic | 50.0% | |
| CTGCAGCAAAGGATAAGCCT+TGG | - | chr4_1:27181823-27181842 | Msa0542360:intron | 50.0% | |
| CAACAAACTCGTGAGGCCTA+TGG | - | chr4_1:27182145-27182164 | Msa0542360:intron | 50.0% | |
| GTGGCTGAACCTTGATCCAT+AGG | + | chr4_1:27182164-27182183 | None:intergenic | 50.0% | |
| CCACCTTTAACCGCTTGAAC+CGG | - | chr4_1:27182180-27182199 | Msa0542360:intron | 50.0% | |
| GTTCCGGTTCAAGCGGTTAA+AGG | + | chr4_1:27182186-27182205 | None:intergenic | 50.0% | |
| GCTCCTGTACATGCTGTCAT+TGG | - | chr4_1:27182641-27182660 | Msa0542360:intron | 50.0% | |
| CGTATCCGTGCTTCATAGGT+CGG | + | chr4_1:27181491-27181510 | None:intergenic | 50.0% | |
| CGACCTATGAAGCACGGATA+CGG | - | chr4_1:27182803-27182822 | Msa0542360:intron | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | + | chr4_1:27181495-27181514 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACGGACA+TGG | - | chr4_1:27181495-27181514 | Msa0542360:intron | 50.0% | |
| ! | TCTTCGGATTAGGCGTGTCT+CGG | + | chr4_1:27182961-27182980 | None:intergenic | 50.0% |
| CATGAAGCACGGACACTCTT+CGG | + | chr4_1:27182977-27182996 | None:intergenic | 50.0% | |
| CTGAGAGCTGGAGCTTGAAA+AGG | - | chr4_1:27183229-27183248 | Msa0542360:CDS | 50.0% | |
| ACTATTCCCACCCTAGGTAG+GGG | + | chr4_1:27183768-27183787 | None:intergenic | 50.0% | |
| GACTATTCCCACCCTAGGTA+GGG | + | chr4_1:27183769-27183788 | None:intergenic | 50.0% | |
| GACCATAGGTCCTTGTTGGA+CGG | + | chr4_1:27183796-27183815 | None:intergenic | 50.0% | |
| GCTAGACCATAGGTCCTTGT+TGG | + | chr4_1:27183800-27183819 | None:intergenic | 50.0% | |
| GGCGTTTCGAAACCGAGAGA+TGG | - | chr4_1:27172562-27172581 | Msa0542360:intron | 55.0% | |
| ACCGAGAGATGGAGATTGGG+TGG | - | chr4_1:27172573-27172592 | Msa0542360:intron | 55.0% | |
| GCCACCCAATCTCCATCTCT+CGG | + | chr4_1:27172577-27172596 | None:intergenic | 55.0% | |
| AGTGGAAACCTGGGGAGTAG+TGG | - | chr4_1:27174303-27174322 | Msa0542360:intron | 55.0% | |
| GTGGAAACCTGGGGAGTAGT+GGG | - | chr4_1:27174304-27174323 | Msa0542360:intron | 55.0% | |
| TGGAAACCTGGGGAGTAGTG+GGG | - | chr4_1:27174305-27174324 | Msa0542360:intron | 55.0% | |
| ACTGGACCTCCCCAAGGTAT+CGG | + | chr4_1:27174376-27174395 | None:intergenic | 55.0% | |
| ! | TGAGTGGTTTGCACACCCCA+AGG | - | chr4_1:27174401-27174420 | Msa0542360:intron | 55.0% |
| ! | GATTGGTTCAGATGGAGGGC+CGG | + | chr4_1:27174428-27174447 | None:intergenic | 55.0% |
| AATGCAGTGGGGACTCTGGA+TGG | - | chr4_1:27174753-27174772 | Msa0542360:intron | 55.0% | |
| GTCCATGTCCCTCCTATGAC+AGG | + | chr4_1:27175165-27175184 | None:intergenic | 55.0% | |
| GCGAGCTAGAACAGACGAAC+TGG | + | chr4_1:27176573-27176592 | None:intergenic | 55.0% | |
| !! | CTTCCTGGCTTTGGGGTAGA+TGG | - | chr4_1:27177254-27177273 | Msa0542360:intron | 55.0% |
| !! | TTGTCTCGGCTCGGCATTGA+AGG | - | chr4_1:27177764-27177783 | Msa0542360:intron | 55.0% |
| !! | TGTCTCGGCTCGGCATTGAA+GGG | - | chr4_1:27177765-27177784 | Msa0542360:intron | 55.0% |
| !! | CAGGGAGGTACCAAAGGTGT+AGG | + | chr4_1:27178418-27178437 | None:intergenic | 55.0% |
| !! | CCAGAACAGGGAGGTACCAA+AGG | + | chr4_1:27178424-27178443 | None:intergenic | 55.0% |
| CCTTTGGTACCTCCCTGTTC+TGG | - | chr4_1:27178421-27178440 | Msa0542360:intron | 55.0% | |
| GTGGACCAGGACCACACAAT+TGG | + | chr4_1:27179023-27179042 | None:intergenic | 55.0% | |
| TTTCTCAGCCCCTGCCTTGT+TGG | - | chr4_1:27179607-27179626 | Msa0542360:intron | 55.0% | |
| TGGACCTTCCAACAAGGCAG+GGG | + | chr4_1:27179618-27179637 | None:intergenic | 55.0% | |
| GTGGACCTTCCAACAAGGCA+GGG | + | chr4_1:27179619-27179638 | None:intergenic | 55.0% | |
| AGTGGACCTTCCAACAAGGC+AGG | + | chr4_1:27179620-27179639 | None:intergenic | 55.0% | |
| !! | GACATGGGTTAGTGGGGACA+AGG | - | chr4_1:27180242-27180261 | Msa0542360:intron | 55.0% |
| AGTAGTGCCTAGTCCTGCCA+AGG | - | chr4_1:27180463-27180482 | Msa0542360:intron | 55.0% | |
| TCATCTGATCCTCCAGCTGG+TGG | + | chr4_1:27180891-27180910 | None:intergenic | 55.0% | |
| AGCTCATCTGATCCTCCAGC+TGG | + | chr4_1:27180894-27180913 | None:intergenic | 55.0% | |
| ATGTCAGTGTCCGTCGTGTC+TGG | + | chr4_1:27181524-27181543 | None:intergenic | 55.0% | |
| ACACGACGGACACTGACATG+CGG | - | chr4_1:27181525-27181544 | Msa0542360:intron | 55.0% | |
| ! | GTGTCGCTATGTGTCGGTGT+CGG | - | chr4_1:27181595-27181614 | Msa0542360:intron | 55.0% |
| ! | CCTGACTCTGGTGGTGAATG+CGG | - | chr4_1:27181768-27181787 | Msa0542360:intron | 55.0% |
| CTCGTGAGGCCTATGGATCA+AGG | - | chr4_1:27182152-27182171 | Msa0542360:intron | 55.0% | |
| CCGGTTCAAGCGGTTAAAGG+TGG | + | chr4_1:27182183-27182202 | None:intergenic | 55.0% | |
| CATGCTGTCATTGGCATGGC+TGG | - | chr4_1:27182650-27182669 | Msa0542360:intron | 55.0% | |
| ACGGATACGGACATGGACAC+CGG | - | chr4_1:27182816-27182835 | Msa0542360:intron | 55.0% | |
| ! | GATTAGGCGTGTCTCGGTGT+CGG | + | chr4_1:27182955-27182974 | None:intergenic | 55.0% |
| GCACGGACACTCTTCGGATT+AGG | + | chr4_1:27182971-27182990 | None:intergenic | 55.0% | |
| !! | CGAAGAGTGTCCGTGCTTCA+TGG | - | chr4_1:27182975-27182994 | Msa0542360:intron | 55.0% |
| TTGTCGGCAGCCATGAAGCA+CGG | + | chr4_1:27182988-27183007 | None:intergenic | 55.0% | |
| GGACTATTCCCACCCTAGGT+AGG | + | chr4_1:27183770-27183789 | None:intergenic | 55.0% | |
| ACCTAGGGTGGGAATAGTCC+AGG | - | chr4_1:27183770-27183789 | Msa0542360:five_prime_UTR | 55.0% | |
| ATAGTCCAGGCCGTCCAACA+AGG | - | chr4_1:27183783-27183802 | Msa0542360:five_prime_UTR | 55.0% | |
| CGGTTTCGAAACGCCGGTGA+CGG | + | chr4_1:27172557-27172576 | None:intergenic | 60.0% | |
| GTACTACCCCACTACTCCCC+AGG | + | chr4_1:27174314-27174333 | None:intergenic | 60.0% | |
| GGTTTGCACACCCCAAGGTC+CGG | - | chr4_1:27174406-27174425 | Msa0542360:intron | 60.0% | |
| ! | GGTACCTCCCTGTTCTGGAC+TGG | - | chr4_1:27178426-27178445 | Msa0542360:intron | 60.0% |
| ! | TCAGCCCCTGCCTTGTTGGA+AGG | - | chr4_1:27179611-27179630 | Msa0542360:intron | 60.0% |
| ! | GCGGCCCAAGTTTGAAACCG+CGG | + | chr4_1:27179761-27179780 | None:intergenic | 60.0% |
| GACACGGACACCAGACACGA+CGG | - | chr4_1:27181511-27181530 | Msa0542360:intron | 60.0% | |
| CCGCATTCACCACCAGAGTC+AGG | + | chr4_1:27181771-27181790 | None:intergenic | 60.0% | |
| CGCTGCCGACCTATGAAGCA+CGG | - | chr4_1:27182797-27182816 | Msa0542360:intron | 60.0% | |
| CGACGTGTCAGTGTCGTGTC+CGG | + | chr4_1:27182838-27182857 | None:intergenic | 60.0% | |
| !! | GTCTCGGTGTCGGACATGAC+CGG | + | chr4_1:27182945-27182964 | None:intergenic | 60.0% |
| ! | TGCATTGGCAGGCTGAGAGC+TGG | - | chr4_1:27183217-27183236 | Msa0542360:CDS | 60.0% |
| GCCTGGACTATTCCCACCCT+AGG | + | chr4_1:27183774-27183793 | None:intergenic | 60.0% | |
| TAGGTCCTTGTTGGACGGCC+TGG | + | chr4_1:27183791-27183810 | None:intergenic | 60.0% | |
| GGCCGTCCAACAAGGACCTA+TGG | - | chr4_1:27183791-27183810 | Msa0542360:five_prime_UTR | 60.0% | |
| AGATGGAGGGCCGGACCTTG+GGG | + | chr4_1:27174419-27174438 | None:intergenic | 65.0% | |
| CAGATGGAGGGCCGGACCTT+GGG | + | chr4_1:27174420-27174439 | None:intergenic | 65.0% | |
| TCAGATGGAGGGCCGGACCT+TGG | + | chr4_1:27174421-27174440 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 27172124 | 27183839 | 27172124 | ID=Msa0542360;Name=Msa0542360 |
| chr4_1 | mRNA | 27172124 | 27183839 | 27172124 | ID=Msa0542360-mRNA-1;Parent=Msa0542360;Name=Msa0542360-mRNA-1;_AED=0.19;_eAED=0.19;_QI=162|0.4|0.63|0.90|0.8|1|11|355|497 |
| chr4_1 | exon | 27172124 | 27172532 | 27172124 | ID=Msa0542360-mRNA-1:exon:7328;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27172655 | 27172735 | 27172655 | ID=Msa0542360-mRNA-1:exon:7327;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27173263 | 27173451 | 27173263 | ID=Msa0542360-mRNA-1:exon:7326;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27174043 | 27174229 | 27174043 | ID=Msa0542360-mRNA-1:exon:7325;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27174983 | 27175115 | 27174983 | ID=Msa0542360-mRNA-1:exon:7324;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27175415 | 27175504 | 27175415 | ID=Msa0542360-mRNA-1:exon:7323;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27175621 | 27175709 | 27175621 | ID=Msa0542360-mRNA-1:exon:7322;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27176331 | 27176518 | 27176331 | ID=Msa0542360-mRNA-1:exon:7321;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27177352 | 27177411 | 27177352 | ID=Msa0542360-mRNA-1:exon:7320;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27183178 | 27183265 | 27183178 | ID=Msa0542360-mRNA-1:exon:7319;Parent=Msa0542360-mRNA-1 |
| chr4_1 | exon | 27183343 | 27183839 | 27183343 | ID=Msa0542360-mRNA-1:exon:7318;Parent=Msa0542360-mRNA-1 |
| chr4_1 | five_prime_UTR | 27183678 | 27183839 | 27183678 | ID=Msa0542360-mRNA-1:five_prime_utr;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27183343 | 27183677 | 27183343 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27183178 | 27183265 | 27183178 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27177352 | 27177411 | 27177352 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27176331 | 27176518 | 27176331 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27175621 | 27175709 | 27175621 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27175415 | 27175504 | 27175415 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27174983 | 27175115 | 27174983 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27174043 | 27174229 | 27174043 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27173263 | 27173451 | 27173263 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27172655 | 27172735 | 27172655 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | CDS | 27172479 | 27172532 | 27172479 | ID=Msa0542360-mRNA-1:cds;Parent=Msa0542360-mRNA-1 |
| chr4_1 | three_prime_UTR | 27172124 | 27172478 | 27172124 | ID=Msa0542360-mRNA-1:three_prime_utr;Parent=Msa0542360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
