Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901620 | XP_004513097.1 | 88.506 | 87 | 10 | 0 | 16 | 102 | 3 | 89 | 4.32e-47 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901620 | A0A1S2Z130 | 88.506 | 87 | 10 | 0 | 16 | 102 | 3 | 89 | 2.06e-47 | 155 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0183010 | Msa0901620 | 0.835082 | 2.064212e-56 | -8.615850e-47 |
| Msa0230640 | Msa0901620 | 0.816764 | 4.673586e-52 | -8.615850e-47 |
| Msa0458440 | Msa0901620 | -0.806070 | 9.831384e-50 | -8.615850e-47 |
| Msa0901620 | Msa1264860 | 0.810614 | 1.055934e-50 | -8.615850e-47 |
| Msa0901620 | Msa1451620 | 0.800287 | 1.547192e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901620 | AT4G18400.1 | 66.667 | 81 | 24 | 2 | 25 | 102 | 27 | 107 | 1.35e-29 | 102 |
Find 30 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGAAAATACATAGATTT+TGG | 0.159861 | 6_1:+98374123 | None:intergenic |
| TTTACATCCTCTTGATTAAT+TGG | 0.166261 | 6_1:+98374163 | None:intergenic |
| TTTCTTCTCCAACAAATTAA+AGG | 0.200250 | 6_1:-98374271 | Msa0901620:three_prime_UTR |
| TCAATATTGTCAAGAACTTT+TGG | 0.227238 | 6_1:-98376722 | Msa0901620:CDS |
| GCTTACAATGGAATGAATAT+TGG | 0.254169 | 6_1:-98374308 | Msa0901620:three_prime_UTR |
| TTCATCTTCCTTTAATTTGT+TGG | 0.289475 | 6_1:+98374263 | None:intergenic |
| TTCATTCCATTGTAAGCAAT+TGG | 0.326950 | 6_1:+98374314 | None:intergenic |
| AATGGTGGGTCGGAAGGTGG+AGG | 0.391509 | 6_1:+98376997 | None:intergenic |
| TTTGGAACTTCAAACTAAAT+GGG | 0.424588 | 6_1:-98376704 | Msa0901620:CDS |
| AGAAGGAAAGTTACTTCGAC+TGG | 0.431517 | 6_1:+98376963 | None:intergenic |
| GTTTATTGACTTAAAGCCTC+TGG | 0.442243 | 6_1:-98374889 | Msa0901620:CDS |
| GGTAATGGTGGGTCGGAAGG+TGG | 0.447434 | 6_1:+98376994 | None:intergenic |
| TTACTTCGACTGGGATCAAA+TGG | 0.451960 | 6_1:+98376973 | None:intergenic |
| AGAGGCTTTAAGTCAATAAA+CGG | 0.487243 | 6_1:+98374891 | None:intergenic |
| AATGGTAATGGTGGGTCGGA+AGG | 0.530646 | 6_1:+98376991 | None:intergenic |
| CGACTGGGATCAAATGGTAA+TGG | 0.539127 | 6_1:+98376979 | None:intergenic |
| CGCAGAAGCTTCATCAATGG+TGG | 0.550424 | 6_1:-98377085 | Msa0901620:exon |
| ATAGTATATAGCAATTAAAG+AGG | 0.552653 | 6_1:-98374228 | Msa0901620:three_prime_UTR |
| ATGGTGGGTCGGAAGGTGGA+GGG | 0.557898 | 6_1:+98376998 | None:intergenic |
| CTGGGATCAAATGGTAATGG+TGG | 0.558329 | 6_1:+98376982 | None:intergenic |
| ACTTCAAACTAAATGGGAAG+AGG | 0.567529 | 6_1:-98376698 | Msa0901620:intron |
| TTCTAAGCTCTGAAGATATG+TGG | 0.576788 | 6_1:-98374346 | Msa0901620:three_prime_UTR |
| AGGCTTGCCAATTAATCAAG+AGG | 0.580819 | 6_1:-98374170 | Msa0901620:three_prime_UTR |
| ATCAAATGGTAATGGTGGGT+CGG | 0.586109 | 6_1:+98376987 | None:intergenic |
| ACTCGCAGAAGCTTCATCAA+TGG | 0.594241 | 6_1:-98377088 | None:intergenic |
| TATGCTCCAATTGCTTACAA+TGG | 0.606083 | 6_1:-98374320 | Msa0901620:three_prime_UTR |
| TATTGACTTAAAGCCTCTGG+AGG | 0.611942 | 6_1:-98374886 | Msa0901620:CDS |
| TGGGATCAAATGGTAATGGT+GGG | 0.618040 | 6_1:+98376983 | None:intergenic |
| GAAGGAAAGTTACTTCGACT+GGG | 0.629018 | 6_1:+98376964 | None:intergenic |
| TTGTTGGAGAAGAAAAGCTG+AGG | 0.679207 | 6_1:+98374279 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAATTAATATCATATT+TGG | + | chr6_1:98376765-98376784 | None:intergenic | 10.0% |
| !! | AGAAAATTGAAAATTGAAAA+GGG | + | chr6_1:98374261-98374280 | None:intergenic | 15.0% |
| !! | AATTAAATTGTTTATCCAAT+AGG | - | chr6_1:98375759-98375778 | Msa0901620:intron | 15.0% |
| !! | ATTTAATTACAAGTACTTTA+AGG | - | chr6_1:98376642-98376661 | Msa0901620:intron | 15.0% |
| !!! | AATTTTTAGTTCAAGATTTT+AGG | - | chr6_1:98376681-98376700 | Msa0901620:intron | 15.0% |
| !!! | TATTTTGTTAATTGTATTAG+AGG | - | chr6_1:98376997-98377016 | Msa0901620:CDS | 15.0% |
| !! | GAGAAAATTGAAAATTGAAA+AGG | + | chr6_1:98374262-98374281 | None:intergenic | 20.0% |
| !!! | AATTGAGTTTTACTGAATTT+AGG | - | chr6_1:98374286-98374305 | Msa0901620:three_prime_UTR | 20.0% |
| !!! | ATTGAGTTTTACTGAATTTA+GGG | - | chr6_1:98374287-98374306 | Msa0901620:three_prime_UTR | 20.0% |
| !!! | TATTTTTTGTTGAATTGAAG+TGG | - | chr6_1:98374378-98374397 | Msa0901620:intron | 20.0% |
| !!! | ATTTAATTTATTTGCACTGT+TGG | - | chr6_1:98374552-98374571 | Msa0901620:intron | 20.0% |
| !!! | GACTTGTTAGATTTATATAT+TGG | - | chr6_1:98374649-98374668 | Msa0901620:intron | 20.0% |
| !!! | AAGTTGTTTTCATCTTATTT+TGG | + | chr6_1:98374820-98374839 | None:intergenic | 20.0% |
| !! | TTTGGATAAATAGCTTAATT+AGG | - | chr6_1:98374924-98374943 | Msa0901620:intron | 20.0% |
| !! | TTAAGCTATTTATCCTAATA+GGG | + | chr6_1:98375144-98375163 | None:intergenic | 20.0% |
| !! | ATTAAGCTATTTATCCTAAT+AGG | + | chr6_1:98375145-98375164 | None:intergenic | 20.0% |
| !!! | TATAAATTTGAAGCCATAAT+TGG | - | chr6_1:98376211-98376230 | Msa0901620:intron | 20.0% |
| !! | ATTTGGATATAGAATAATGA+AGG | + | chr6_1:98376748-98376767 | None:intergenic | 20.0% |
| !! | ATAGTATATAGCAATTAAAG+AGG | - | chr6_1:98376959-98376978 | Msa0901620:intron | 20.0% |
| !!! | ACTTGAAAATACATAGATTT+TGG | + | chr6_1:98377067-98377086 | None:intergenic | 20.0% |
| !!! | TCTTGTTCTTCTATTTTTGA+GGG | + | chr6_1:98374148-98374167 | None:intergenic | 25.0% |
| ! | ATTGAAAATTGAAAAGGGAA+TGG | + | chr6_1:98374256-98374275 | None:intergenic | 25.0% |
| ! | TACATTGCAATTATGAGTTT+AGG | - | chr6_1:98374321-98374340 | Msa0901620:three_prime_UTR | 25.0% |
| ! | ACATTGCAATTATGAGTTTA+GGG | - | chr6_1:98374322-98374341 | Msa0901620:three_prime_UTR | 25.0% |
| !! | TCAATATTGTCAAGAACTTT+TGG | - | chr6_1:98374465-98374484 | Msa0901620:intron | 25.0% |
| !!! | TTTTGGAACTTCAAACTAAA+TGG | - | chr6_1:98374482-98374501 | Msa0901620:intron | 25.0% |
| !! | TTTGGAACTTCAAACTAAAT+GGG | - | chr6_1:98374483-98374502 | Msa0901620:intron | 25.0% |
| ! | TATAAAGGGATATAAAAGAG+TGG | + | chr6_1:98374527-98374546 | None:intergenic | 25.0% |
| !! | GTGTTTTCAAATACATTACA+TGG | + | chr6_1:98374627-98374646 | None:intergenic | 25.0% |
| !! | ATTTATATATTGGCTACGTT+TGG | - | chr6_1:98374659-98374678 | Msa0901620:intron | 25.0% |
| !! | ACTGATTTCATAAACTATCT+CGG | - | chr6_1:98374786-98374805 | Msa0901620:intron | 25.0% |
| ! | ATTTAGAAACTAATAATGCC+CGG | - | chr6_1:98374893-98374912 | Msa0901620:CDS | 25.0% |
| ! | TAAACTAATAATGCCCTATT+AGG | - | chr6_1:98375128-98375147 | Msa0901620:intron | 25.0% |
| ! | TTATGTAAGTGCTTATGTAT+TGG | - | chr6_1:98375190-98375209 | Msa0901620:intron | 25.0% |
| ! | ATGAAAATAAATTGAAGAGC+AGG | + | chr6_1:98375388-98375407 | None:intergenic | 25.0% |
| !! | TTTTCATCTTACATCGATAA+AGG | + | chr6_1:98375844-98375863 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGGTATTAGAAAG+AGG | - | chr6_1:98375986-98376005 | Msa0901620:intron | 25.0% |
| !! | TTTTAGTGGTATTAGAAAGA+GGG | - | chr6_1:98375987-98376006 | Msa0901620:intron | 25.0% |
| ! | TGAAGGTAATGTGATTATAA+GGG | + | chr6_1:98376030-98376049 | None:intergenic | 25.0% |
| ! | ATGAAGGTAATGTGATTATA+AGG | + | chr6_1:98376031-98376050 | None:intergenic | 25.0% |
| ! | AGAAATATTACCCATTACAA+AGG | - | chr6_1:98376147-98376166 | Msa0901620:intron | 25.0% |
| ! | TGAAACACTATAACCAATTA+TGG | + | chr6_1:98376227-98376246 | None:intergenic | 25.0% |
| ! | TCAATAAGCTAAATAAGCTA+TGG | + | chr6_1:98376418-98376437 | None:intergenic | 25.0% |
| ! | AAGTACACAAAGTTAATATG+TGG | - | chr6_1:98376448-98376467 | Msa0901620:intron | 25.0% |
| ! | AAAGTTAATATGTGGATTCA+GGG | - | chr6_1:98376456-98376475 | Msa0901620:intron | 25.0% |
| ! | ATCTCACTGTAATAAACTAT+AGG | + | chr6_1:98376619-98376638 | None:intergenic | 25.0% |
| ! | TTTCTTCTCCAACAAATTAA+AGG | - | chr6_1:98376916-98376935 | Msa0901620:intron | 25.0% |
| !!! | TTCATCTTCCTTTAATTTGT+TGG | + | chr6_1:98376927-98376946 | None:intergenic | 25.0% |
| ! | TTTACATCCTCTTGATTAAT+TGG | + | chr6_1:98377027-98377046 | None:intergenic | 25.0% |
| !!! | CTCTTGTTCTTCTATTTTTG+AGG | + | chr6_1:98374149-98374168 | None:intergenic | 30.0% |
| AAAATTGAAAAGGGAATGGA+AGG | + | chr6_1:98374252-98374271 | None:intergenic | 30.0% | |
| ! | TTTTGTTGAATTGAAGTGGT+TGG | - | chr6_1:98374382-98374401 | Msa0901620:intron | 30.0% |
| TTCAAATACATTACATGGTG+TGG | + | chr6_1:98374622-98374641 | None:intergenic | 30.0% | |
| TATGCTATAAGTTGCAACTA+AGG | + | chr6_1:98374692-98374711 | None:intergenic | 30.0% | |
| ATTTATCCAAAGTTCCAAAC+CGG | + | chr6_1:98374915-98374934 | None:intergenic | 30.0% | |
| TCAAATAAGTCAATCCAAAC+AGG | + | chr6_1:98375296-98375315 | None:intergenic | 30.0% | |
| TATTAACATAACCACTTGTG+AGG | - | chr6_1:98375323-98375342 | Msa0901620:intron | 30.0% | |
| !! | TTTATTTTCATATGCTCTCC+AGG | - | chr6_1:98375397-98375416 | Msa0901620:intron | 30.0% |
| !!! | GTTGTTTTTATGAGTTATCC+TGG | + | chr6_1:98375418-98375437 | None:intergenic | 30.0% |
| TTGGAATAACTTACGAAAAC+AGG | - | chr6_1:98375564-98375583 | Msa0901620:intron | 30.0% | |
| ! | GTTTCTTGTTAGCATTTTAG+TGG | - | chr6_1:98375973-98375992 | Msa0901620:intron | 30.0% |
| GACATTTCACAACATAATGA+AGG | + | chr6_1:98376047-98376066 | None:intergenic | 30.0% | |
| TAAGATAAGCTGTGATCATA+TGG | - | chr6_1:98376078-98376097 | Msa0901620:intron | 30.0% | |
| !! | AGAGGCTTTAAGTCAATAAA+CGG | + | chr6_1:98376299-98376318 | None:intergenic | 30.0% |
| !!! | AACTTTTTCATGCGTTTAGA+GGG | + | chr6_1:98376350-98376369 | None:intergenic | 30.0% |
| CAAAGTTAATATGTGGATTC+AGG | - | chr6_1:98376455-98376474 | Msa0901620:intron | 30.0% | |
| ACAAAAGCTGAATGCAATAA+TGG | + | chr6_1:98376536-98376555 | None:intergenic | 30.0% | |
| TTCATTCCATTGTAAGCAAT+TGG | + | chr6_1:98376876-98376895 | None:intergenic | 30.0% | |
| GCTTACAATGGAATGAATAT+TGG | - | chr6_1:98376879-98376898 | Msa0901620:intron | 30.0% | |
| !!! | TTTTCAAGTTTGATCTTCGA+TGG | - | chr6_1:98377078-98377097 | Msa0901620:exon | 30.0% |
| ACTTCAAACTAAATGGGAAG+AGG | - | chr6_1:98374489-98374508 | Msa0901620:intron | 35.0% | |
| TTTATCCAAAGTTCCAAACC+GGG | + | chr6_1:98374914-98374933 | None:intergenic | 35.0% | |
| AAGTAAGGTGAAAACAGTGT+AGG | - | chr6_1:98375066-98375085 | Msa0901620:intron | 35.0% | |
| AGTAAGGTGAAAACAGTGTA+GGG | - | chr6_1:98375067-98375086 | Msa0901620:intron | 35.0% | |
| TAGCGTATACATAAGCAGTT+AGG | - | chr6_1:98375484-98375503 | Msa0901620:intron | 35.0% | |
| TAACTTACGAAAACAGGCTA+TGG | - | chr6_1:98375570-98375589 | Msa0901620:intron | 35.0% | |
| !! | GCTGTTTTCATAAGCTATGT+TGG | + | chr6_1:98375636-98375655 | None:intergenic | 35.0% |
| CTTATCATCTAAGCTCCTAT+TGG | + | chr6_1:98375777-98375796 | None:intergenic | 35.0% | |
| ACATCGATAAAGGTTCTGTT+TGG | + | chr6_1:98375834-98375853 | None:intergenic | 35.0% | |
| TGAGTACTCGTCAAACTATT+TGG | + | chr6_1:98375906-98375925 | None:intergenic | 35.0% | |
| TAAATAAGTCGATCCAACAC+AGG | - | chr6_1:98375941-98375960 | Msa0901620:intron | 35.0% | |
| CATTATGTTGTGAAATGTCG+TGG | - | chr6_1:98376048-98376067 | Msa0901620:intron | 35.0% | |
| CCAAACAAAGCCTTTGTAAT+GGG | + | chr6_1:98376160-98376179 | None:intergenic | 35.0% | |
| !! | CCATTACAAAGGCTTTGTTT+GGG | - | chr6_1:98376158-98376177 | Msa0901620:intron | 35.0% |
| !! | GTTTATTGACTTAAAGCCTC+TGG | - | chr6_1:98376298-98376317 | Msa0901620:intron | 35.0% |
| !!! | CAACTTTTTCATGCGTTTAG+AGG | + | chr6_1:98376351-98376370 | None:intergenic | 35.0% |
| TTGTCAAGAACTTGTAACCA+TGG | - | chr6_1:98376552-98376571 | Msa0901620:intron | 35.0% | |
| TTCATCTGATCATTCTACCA+TGG | + | chr6_1:98376572-98376591 | None:intergenic | 35.0% | |
| !! | TTCTAAGCTCTGAAGATATG+TGG | - | chr6_1:98376841-98376860 | Msa0901620:intron | 35.0% |
| TATGCTCCAATTGCTTACAA+TGG | - | chr6_1:98376867-98376886 | Msa0901620:intron | 35.0% | |
| !! | ATCAAATGGTAATGGTGGGT+CGG | + | chr6_1:98374203-98374222 | None:intergenic | 40.0% |
| !! | TGGGATCAAATGGTAATGGT+GGG | + | chr6_1:98374207-98374226 | None:intergenic | 40.0% |
| TTACTTCGACTGGGATCAAA+TGG | + | chr6_1:98374217-98374236 | None:intergenic | 40.0% | |
| GAAGGAAAGTTACTTCGACT+GGG | + | chr6_1:98374226-98374245 | None:intergenic | 40.0% | |
| AGAAGGAAAGTTACTTCGAC+TGG | + | chr6_1:98374227-98374246 | None:intergenic | 40.0% | |
| AAAGGGAATGGAAGGAAAGA+AGG | + | chr6_1:98374244-98374263 | None:intergenic | 40.0% | |
| GAAACTAATAATGCCCGGTT+TGG | - | chr6_1:98374898-98374917 | Msa0901620:intron | 40.0% | |
| ATAGAGAGTTTGAGCCTGTT+TGG | - | chr6_1:98375279-98375298 | Msa0901620:intron | 40.0% | |
| TAACCACTTGTGAGGTTGTT+TGG | - | chr6_1:98375331-98375350 | Msa0901620:intron | 40.0% | |
| TTTGGACTTGGAAGAGCTTA+TGG | - | chr6_1:98375349-98375368 | Msa0901620:intron | 40.0% | |
| ! | ATAAGCAGTTAGGCACTGTT+TGG | - | chr6_1:98375494-98375513 | Msa0901620:intron | 40.0% |
| !! | TAAGCACTTCTGAGACTGTT+TGG | - | chr6_1:98375545-98375564 | Msa0901620:intron | 40.0% |
| AAACAACTTACAGCCTGTGT+TGG | + | chr6_1:98375957-98375976 | None:intergenic | 40.0% | |
| !! | CCCATTACAAAGGCTTTGTT+TGG | - | chr6_1:98376157-98376176 | Msa0901620:intron | 40.0% |
| CCCAAACAAAGCCTTTGTAA+TGG | + | chr6_1:98376161-98376180 | None:intergenic | 40.0% | |
| !! | TATTGACTTAAAGCCTCTGG+AGG | - | chr6_1:98376301-98376320 | Msa0901620:intron | 40.0% |
| !!! | TCCTTTTTTGATTCCTCCAG+AGG | + | chr6_1:98376317-98376336 | None:intergenic | 40.0% |
| AAGTTGCGCTAGGTATGATA+TGG | - | chr6_1:98376365-98376384 | Msa0901620:intron | 40.0% | |
| TTGTTGGAGAAGAAAAGCTG+AGG | + | chr6_1:98376911-98376930 | None:intergenic | 40.0% | |
| AGGCTTGCCAATTAATCAAG+AGG | - | chr6_1:98377017-98377036 | Msa0901620:CDS | 40.0% | |
| !! | CTGGGATCAAATGGTAATGG+TGG | + | chr6_1:98374208-98374227 | None:intergenic | 45.0% |
| CGACTGGGATCAAATGGTAA+TGG | + | chr6_1:98374211-98374230 | None:intergenic | 45.0% | |
| ATGGTGTGGCAACACATGAT+TGG | + | chr6_1:98374608-98374627 | None:intergenic | 45.0% | |
| !! | TAATGCCCGGTTTGGAACTT+TGG | - | chr6_1:98374906-98374925 | Msa0901620:intron | 45.0% |
| AAGCTATCCTAGAGAGCTTG+TGG | - | chr6_1:98375043-98375062 | Msa0901620:intron | 45.0% | |
| CTTACTTCCACAAGCTCTCT+AGG | + | chr6_1:98375053-98375072 | None:intergenic | 45.0% | |
| CTAGAGAGCTTGTGGAAGTA+AGG | - | chr6_1:98375051-98375070 | Msa0901620:intron | 45.0% | |
| AGTCCAAACAACCTCACAAG+TGG | + | chr6_1:98375337-98375356 | None:intergenic | 45.0% | |
| CTTGTGAGGTTGTTTGGACT+TGG | - | chr6_1:98375337-98375356 | Msa0901620:intron | 45.0% | |
| !! | CTCAGAAGTGCTTATGTCAG+TGG | + | chr6_1:98375539-98375558 | None:intergenic | 45.0% |
| ! | GCCTCTGGAGGAATCAAAAA+AGG | - | chr6_1:98376313-98376332 | Msa0901620:intron | 45.0% |
| ACGCATGAAAAAGTTGCGCT+AGG | - | chr6_1:98376355-98376374 | Msa0901620:intron | 45.0% | |
| !! | AAATTAAATTCATATATAAA+GGG | + | chr6_1:98374541-98374560 | None:intergenic | 5.0% |
| !! | TAAATTAAATTCATATATAA+AGG | + | chr6_1:98374542-98374561 | None:intergenic | 5.0% |
| !! | GATTAATTTATTTATTTATT+TGG | - | chr6_1:98376808-98376827 | Msa0901620:intron | 5.0% |
| !! | AATGGTAATGGTGGGTCGGA+AGG | + | chr6_1:98374199-98374218 | None:intergenic | 50.0% |
| ATGCGTTTAGAGGGACGCGT+TGG | + | chr6_1:98376341-98376360 | None:intergenic | 55.0% | |
| !! | ATGGTGGGTCGGAAGGTGGA+GGG | + | chr6_1:98374192-98374211 | None:intergenic | 60.0% |
| !! | AATGGTGGGTCGGAAGGTGG+AGG | + | chr6_1:98374193-98374212 | None:intergenic | 60.0% |
| !! | GGTAATGGTGGGTCGGAAGG+TGG | + | chr6_1:98374196-98374215 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 98374105 | 98377104 | 98374105 | ID=Msa0901620;Name=Msa0901620 |
| chr6_1 | mRNA | 98374105 | 98377104 | 98374105 | ID=Msa0901620-mRNA-1;Parent=Msa0901620;Name=Msa0901620-mRNA-1;_AED=0.00;_eAED=0.00;_QI=13|1|1|1|0.66|0.75|4|265|102 |
| chr6_1 | exon | 98374105 | 98374369 | 98374105 | ID=Msa0901620-mRNA-1:exon:17319;Parent=Msa0901620-mRNA-1 |
| chr6_1 | exon | 98374833 | 98374913 | 98374833 | ID=Msa0901620-mRNA-1:exon:17318;Parent=Msa0901620-mRNA-1 |
| chr6_1 | exon | 98376699 | 98376811 | 98376699 | ID=Msa0901620-mRNA-1:exon:17317;Parent=Msa0901620-mRNA-1 |
| chr6_1 | exon | 98376977 | 98377104 | 98376977 | ID=Msa0901620-mRNA-1:exon:17316;Parent=Msa0901620-mRNA-1 |
| chr6_1 | five_prime_UTR | 98377092 | 98377104 | 98377092 | ID=Msa0901620-mRNA-1:five_prime_utr;Parent=Msa0901620-mRNA-1 |
| chr6_1 | CDS | 98376977 | 98377091 | 98376977 | ID=Msa0901620-mRNA-1:cds;Parent=Msa0901620-mRNA-1 |
| chr6_1 | CDS | 98376699 | 98376811 | 98376699 | ID=Msa0901620-mRNA-1:cds;Parent=Msa0901620-mRNA-1 |
| chr6_1 | CDS | 98374833 | 98374913 | 98374833 | ID=Msa0901620-mRNA-1:cds;Parent=Msa0901620-mRNA-1 |
| chr6_1 | three_prime_UTR | 98374105 | 98374369 | 98374105 | ID=Msa0901620-mRNA-1:three_prime_utr;Parent=Msa0901620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
