Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0925320 | XP_003620948.4 | 92.484 | 479 | 21 | 4 | 9 | 474 | 14 | 490 | 0.0 | 827 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0925320 | sp|Q8GWJ4|OSB3_ARATH | 40.000 | 430 | 165 | 11 | 62 | 463 | 71 | 435 | 7.91e-82 | 263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0075740 | Msa0925320 | 0.804646 | 1.954843e-49 | -8.615850e-47 |
| Msa0075750 | Msa0925320 | 0.813780 | 2.152680e-51 | -8.615850e-47 |
| Msa0646960 | Msa0925320 | 0.813800 | 2.130789e-51 | -8.615850e-47 |
| Msa0715330 | Msa0925320 | 0.825944 | 3.556160e-54 | -8.615850e-47 |
| Msa0369580 | Msa0925320 | -0.810369 | 1.192844e-50 | -8.615850e-47 |
| Msa0268440 | Msa0925320 | -0.803342 | 3.649433e-49 | -8.615850e-47 |
| Msa0901730 | Msa0925320 | 0.829824 | 4.147033e-55 | -8.615850e-47 |
| Msa0925320 | Msa0966110 | 0.859222 | 4.802780e-63 | -8.615850e-47 |
| Msa0925320 | Msa1221780 | -0.833959 | 3.951629e-56 | -8.615850e-47 |
| Msa0925320 | Msa1333900 | -0.819253 | 1.279516e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0925320 | MtrunA17_Chr6g0488631 | 92.484 | 479 | 21 | 4 | 9 | 474 | 14 | 490 | 0.0 | 827 |
| Msa0925320 | MtrunA17_Chr1g0184811 | 52.459 | 61 | 27 | 1 | 406 | 464 | 248 | 308 | 2.25e-13 | 71.2 |
| Msa0925320 | MtrunA17_Chr1g0184811 | 26.244 | 221 | 153 | 3 | 42 | 262 | 84 | 294 | 1.30e-12 | 68.9 |
| Msa0925320 | MtrunA17_Chr1g0184811 | 44.118 | 68 | 36 | 1 | 335 | 400 | 248 | 315 | 3.95e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0925320 | AT5G44785.1 | 40.000 | 430 | 165 | 11 | 62 | 463 | 71 | 435 | 8.04e-83 | 263 |
| Msa0925320 | AT5G44785.2 | 40.139 | 431 | 165 | 11 | 62 | 463 | 71 | 437 | 8.51e-83 | 263 |
| Msa0925320 | AT4G20010.1 | 34.746 | 354 | 166 | 6 | 48 | 394 | 74 | 369 | 1.11e-60 | 203 |
| Msa0925320 | AT4G20010.1 | 54.745 | 137 | 58 | 1 | 332 | 464 | 232 | 368 | 2.25e-44 | 160 |
| Msa0925320 | AT4G20010.2 | 34.746 | 354 | 166 | 6 | 48 | 394 | 74 | 369 | 1.69e-60 | 202 |
| Msa0925320 | AT4G20010.2 | 54.745 | 137 | 58 | 1 | 332 | 464 | 232 | 368 | 2.42e-44 | 160 |
| Msa0925320 | AT1G31010.1 | 53.957 | 139 | 61 | 2 | 246 | 384 | 208 | 343 | 1.62e-42 | 154 |
| Msa0925320 | AT1G31010.1 | 32.468 | 308 | 140 | 11 | 55 | 313 | 55 | 343 | 2.03e-32 | 127 |
| Msa0925320 | AT1G31010.1 | 50.000 | 134 | 58 | 3 | 333 | 461 | 220 | 349 | 2.42e-29 | 118 |
| Msa0925320 | AT1G47720.1 | 55.932 | 59 | 23 | 2 | 400 | 455 | 179 | 237 | 2.61e-12 | 67.4 |
Find 157 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTCCTCTTGTCTTTCA+TGG | 0.185249 | 6_2:+68304274 | Msa0925320:CDS |
| GGCTTCAACGGTGGCAATTT+TGG | 0.189995 | 6_2:-68310664 | None:intergenic |
| TTTACTGTCCTTTGCTTGTT+TGG | 0.220800 | 6_2:-68310043 | None:intergenic |
| ACCTCAACAATATCAGTTTC+AGG | 0.229878 | 6_2:+68304399 | Msa0925320:CDS |
| GAAGGCTGCTTTAACTTCTA+AGG | 0.230849 | 6_2:+68304992 | Msa0925320:CDS |
| CCGTTCATTAAGCTGATATT+TGG | 0.240791 | 6_2:-68310717 | None:intergenic |
| CGAAAATCCCACCACTTCTT+TGG | 0.245451 | 6_2:-68308074 | None:intergenic |
| AAGCACAAAGATACTGGTTT+AGG | 0.261216 | 6_2:+68309943 | Msa0925320:CDS |
| GTTGACGGAGTTGGCGAGTT+TGG | 0.264543 | 6_2:-68304146 | None:intergenic |
| TTTGTTTGTTTGGGTTTAAC+AGG | 0.266339 | 6_2:-68308316 | None:intergenic |
| TGCTTGAAATCGGGTCCTTT+TGG | 0.268732 | 6_2:-68310589 | None:intergenic |
| ACTTGCATTTGGGAGGGTTT+TGG | 0.271602 | 6_2:+68303964 | Msa0925320:CDS |
| TCTTGTCTTTCATGGTGATT+TGG | 0.281239 | 6_2:+68304282 | Msa0925320:CDS |
| CGCCTATTTGTCAAGTCCTT+GGG | 0.286704 | 6_2:+68308034 | Msa0925320:CDS |
| TTTATTAATGACATCCTTCC+AGG | 0.301493 | 6_2:-68307698 | None:intergenic |
| GTTTCTGCACTTTGTTGTTT+CGG | 0.308351 | 6_2:-68310685 | None:intergenic |
| GCCAACTCCGTCAACCTAAT+TGG | 0.309335 | 6_2:+68304154 | Msa0925320:CDS |
| GTTTGTTAACAGTACCAATT+AGG | 0.314891 | 6_2:-68304168 | None:intergenic |
| GGTGTCTTTGTGCTTGAAAT+CGG | 0.321172 | 6_2:-68310599 | None:intergenic |
| TATATCCGTAATATTCATTT+CGG | 0.330864 | 6_2:-68303936 | None:intergenic |
| GATATAAAACTACTTGCATT+TGG | 0.334198 | 6_2:+68303953 | Msa0925320:CDS |
| TGCTGCAAAACCCAGCTAAA+TGG | 0.338848 | 6_2:+68309767 | Msa0925320:CDS |
| CCATCCTTGCGCTTGAAGTC+AGG | 0.339558 | 6_2:-68308217 | None:intergenic |
| TGCTGCAAAATCCAGCTAAA+TGG | 0.344950 | 6_2:+68310434 | Msa0925320:CDS |
| GGAGTAAAACTCGCCGTATT+GGG | 0.348045 | 6_2:-68304018 | None:intergenic |
| GGTTGCCGTCGGTGGAAGTT+TGG | 0.353746 | 6_2:-68304201 | None:intergenic |
| TTTGGGTTGGAATGGGATTT+CGG | 0.354684 | 6_2:-68304128 | None:intergenic |
| TTGACGGAGTTGGCGAGTTT+GGG | 0.356940 | 6_2:-68304145 | None:intergenic |
| AGCACAAAGATACTGGTTTA+GGG | 0.362526 | 6_2:+68309944 | Msa0925320:CDS |
| GATTTCAAGCACAAAGATAC+TGG | 0.362858 | 6_2:+68309937 | Msa0925320:CDS |
| AGGAGTAAAACTCGCCGTAT+TGG | 0.378745 | 6_2:-68304019 | None:intergenic |
| TTGGCGAGTTTGGGTTGGAA+TGG | 0.388117 | 6_2:-68304136 | None:intergenic |
| CGCTTGAAGTCAGGGTACTT+TGG | 0.389659 | 6_2:-68308208 | None:intergenic |
| GTGGAAGTTTGGAAGTGAAT+AGG | 0.391890 | 6_2:-68304190 | None:intergenic |
| CCGCCTATTTGTCAAGTCCT+TGG | 0.392562 | 6_2:+68308033 | Msa0925320:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.399109 | 6_2:-68309778 | None:intergenic |
| TGGCGAGTTTGGGTTGGAAT+GGG | 0.399849 | 6_2:-68304135 | None:intergenic |
| AGTCTAGATAAAACCGACTT+TGG | 0.401993 | 6_2:-68308268 | None:intergenic |
| GGTGAAGGGCTATGGCTTAG+AGG | 0.405231 | 6_2:+68310622 | Msa0925320:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.407094 | 6_2:-68310445 | None:intergenic |
| GTGTCTTTGTGCTTGAAATC+GGG | 0.407865 | 6_2:-68310598 | None:intergenic |
| TGTGGCGGCGGTGGAGTAGT+TGG | 0.408360 | 6_2:-68304062 | None:intergenic |
| ATATAAAACTACTTGCATTT+GGG | 0.409113 | 6_2:+68303954 | Msa0925320:CDS |
| GGCTTAGAGGTTCACCAAGT+TGG | 0.411869 | 6_2:+68310635 | Msa0925320:CDS |
| GCTCAGAGATTCACCAAGTT+GGG | 0.411950 | 6_2:+68309972 | Msa0925320:CDS |
| CTTTGTTGTTTCGGCTTCAA+CGG | 0.413639 | 6_2:-68310676 | None:intergenic |
| TGAGCATTATTATACTTATG+AGG | 0.415484 | 6_2:+68310946 | Msa0925320:three_prime_UTR |
| CTGAAGTCGTTTACCAAGTT+CGG | 0.421690 | 6_2:+68310762 | Msa0925320:three_prime_UTR |
| GCTTAGAGGTTCACCAAGTT+GGG | 0.431791 | 6_2:+68310636 | Msa0925320:CDS |
| GCGAATGGTGGTTGTGGCGG+CGG | 0.434263 | 6_2:-68304074 | None:intergenic |
| CAAATATCAGCTTAATGAAC+GGG | 0.434364 | 6_2:+68310718 | Msa0925320:exon |
| GTATCTTTGTGCTTGAAATC+CGG | 0.434859 | 6_2:-68309934 | None:intergenic |
| TGAACTAAGCAGTTCACTAA+AGG | 0.436586 | 6_2:-68311025 | None:intergenic |
| AATGGTGGTTGTGGCGGCGG+TGG | 0.439552 | 6_2:-68304071 | None:intergenic |
| GGCGGTGTATTTCTTTGCAC+TGG | 0.440205 | 6_2:-68308015 | None:intergenic |
| GAACTAAGCAGTTCACTAAA+GGG | 0.441462 | 6_2:-68311024 | None:intergenic |
| GGTTGGAATGGGATTTCGGT+TGG | 0.444856 | 6_2:-68304124 | None:intergenic |
| AATGATGTTGTTCATGTTGA+GGG | 0.447305 | 6_2:+68304334 | Msa0925320:CDS |
| TTGGTTTAGGTGATGAATCC+TGG | 0.456627 | 6_2:+68310404 | Msa0925320:intron |
| ATGTACAGCCTTCCATTGAC+TGG | 0.456827 | 6_2:-68307722 | None:intergenic |
| GCCCCAAGGACTTGACAAAT+AGG | 0.462544 | 6_2:-68308036 | None:intergenic |
| TTGGTTTAGGTGATGAGTCC+TGG | 0.466548 | 6_2:+68309737 | Msa0925320:intron |
| AGGGACCGAAATGAATATTA+CGG | 0.467073 | 6_2:+68303931 | Msa0925320:exon |
| GGTGGAGTAGTTGGTGGTGG+TGG | 0.467507 | 6_2:-68304053 | None:intergenic |
| ACCAATTAGGTTGACGGAGT+TGG | 0.470487 | 6_2:-68304155 | None:intergenic |
| GAAGGCATTAATTAATTACA+TGG | 0.472070 | 6_2:-68310818 | None:intergenic |
| ACTTCTTTGGATCATCTAGA+AGG | 0.476515 | 6_2:-68308061 | None:intergenic |
| CGGAGTTGGCGAGTTTGGGT+TGG | 0.478361 | 6_2:-68304141 | None:intergenic |
| ATACTTATGAGGCTAATCAT+TGG | 0.480718 | 6_2:+68310957 | Msa0925320:three_prime_UTR |
| AACAAAGTGCAGAAACTAGC+TGG | 0.482118 | 6_2:+68310692 | Msa0925320:CDS |
| TTCATCTAGACTGAAAGAAC+TGG | 0.486016 | 6_2:+68309996 | Msa0925320:CDS |
| CATCCTTGCGCTTGAAGTCA+GGG | 0.493504 | 6_2:-68308216 | None:intergenic |
| AGGATGGAAATGTTTCCATC+TGG | 0.494468 | 6_2:+68308233 | Msa0925320:CDS |
| AACATGACACAAGGAAATCC+TGG | 0.500540 | 6_2:+68307680 | Msa0925320:CDS |
| GGCTCAGAGATTCACCAAGT+TGG | 0.503361 | 6_2:+68309971 | Msa0925320:CDS |
| AGGTTATCCTCGTGTTAAGA+AGG | 0.503436 | 6_2:+68304974 | Msa0925320:CDS |
| AACAGTACCAATTAGGTTGA+CGG | 0.510399 | 6_2:-68304161 | None:intergenic |
| GTAAGAAGATCCACCGAACT+TGG | 0.510756 | 6_2:-68310775 | None:intergenic |
| AAGATACTGGTTTAGGGCTG+TGG | 0.512113 | 6_2:+68309950 | Msa0925320:CDS |
| TACACATCAGAACTTTAAGA+AGG | 0.514718 | 6_2:-68310836 | None:intergenic |
| CCTGACTTCAAGCGCAAGGA+TGG | 0.515099 | 6_2:+68308217 | Msa0925320:CDS |
| GCCACTGTCATCACTCGCCT+TGG | 0.518557 | 6_2:+68304232 | Msa0925320:CDS |
| TCATTAATAAACCCAGTCAA+TGG | 0.522364 | 6_2:+68307710 | Msa0925320:CDS |
| TATTATCCCACCATTTAGCT+GGG | 0.523442 | 6_2:-68309777 | None:intergenic |
| GCGAGTGATGACAGTGGCGG+CGG | 0.524621 | 6_2:-68304227 | None:intergenic |
| AGTAGTTGGTGGTGGTGGAT+CGG | 0.527098 | 6_2:-68304048 | None:intergenic |
| TGGTGGTGGTGGATCGGAGA+CGG | 0.528862 | 6_2:-68304042 | None:intergenic |
| ACCTGAAACTGATATTGTTG+AGG | 0.530813 | 6_2:-68304400 | None:intergenic |
| AAGACACCGGTGAAGGGCTA+TGG | 0.531033 | 6_2:+68310614 | Msa0925320:CDS |
| GGAGGTGAAACAGAGAGAAC+TGG | 0.532010 | 6_2:-68310797 | None:intergenic |
| GTGATGACAGTGGCGGCGGA+AGG | 0.533443 | 6_2:-68304223 | None:intergenic |
| AGTCTAGATGAAACCCAACT+TGG | 0.537097 | 6_2:-68309985 | None:intergenic |
| TAAGGAGAAATCAGATATTG+AGG | 0.539728 | 6_2:+68305010 | Msa0925320:CDS |
| GGCGGTGGAGTAGTTGGTGG+TGG | 0.543559 | 6_2:-68304056 | None:intergenic |
| TGCAAAATCCAGCTAAATGG+TGG | 0.546781 | 6_2:+68310437 | Msa0925320:CDS |
| TGGAGCCTTGTCAAGCCAGA+TGG | 0.551248 | 6_2:-68308248 | None:intergenic |
| TCACATCAGAAGAATCCAAA+AGG | 0.553169 | 6_2:+68310574 | Msa0925320:intron |
| TGATGACAGTGGCGGCGGAA+GGG | 0.554487 | 6_2:-68304222 | None:intergenic |
| TGATTTGCGAATGGTGGTTG+TGG | 0.557057 | 6_2:-68304080 | None:intergenic |
| GAGAAATCAGATATTGAGGA+TGG | 0.557205 | 6_2:+68305014 | Msa0925320:CDS |
| TTTATCTAGACTGAAAGCAC+TGG | 0.557738 | 6_2:+68308279 | Msa0925320:CDS |
| TAAAACTACTTGCATTTGGG+AGG | 0.559322 | 6_2:+68303957 | Msa0925320:CDS |
| TGATAGCAAACGCAATGGAT+CGG | 0.561402 | 6_2:+68308097 | Msa0925320:CDS |
| TGTTGTTTCGGCTTCAACGG+TGG | 0.561621 | 6_2:-68310673 | None:intergenic |
| TGTACAGCCTTCCATTGACT+GGG | 0.562189 | 6_2:-68307721 | None:intergenic |
| AAACAAGCAAAGGACAGTAA+AGG | 0.563525 | 6_2:+68310045 | Msa0925320:CDS |
| TGAAATAAAGTCATCAGAGA+AGG | 0.567180 | 6_2:+68307633 | Msa0925320:CDS |
| TCAGAAATATGCAAGAGCTC+CGG | 0.567388 | 6_2:+68309915 | Msa0925320:intron |
| AGAGGAATCAAGAACTGAGA+AGG | 0.569300 | 6_2:-68304262 | None:intergenic |
| CACTTCCAAACTTCCACCGA+CGG | 0.569665 | 6_2:+68304196 | Msa0925320:CDS |
| CCAAATATCAGCTTAATGAA+CGG | 0.571151 | 6_2:+68310717 | Msa0925320:exon |
| AAAACTACTTGCATTTGGGA+GGG | 0.571218 | 6_2:+68303958 | Msa0925320:CDS |
| TGTTTCCATCTGGCTTGACA+AGG | 0.572374 | 6_2:+68308243 | Msa0925320:CDS |
| AAACAAACAAAAGATAGTAA+AGG | 0.572668 | 6_2:+68308328 | Msa0925320:CDS |
| TAATGATGTTGTTCATGTTG+AGG | 0.574995 | 6_2:+68304333 | Msa0925320:CDS |
| GGCGGCGGTGGAGTAGTTGG+TGG | 0.575603 | 6_2:-68304059 | None:intergenic |
| TAATAAACCCAGTCAATGGA+AGG | 0.578339 | 6_2:+68307714 | Msa0925320:CDS |
| TGCAAAACCCAGCTAAATGG+TGG | 0.578339 | 6_2:+68309770 | Msa0925320:CDS |
| GCTTGACAAGGCTCCAAAGT+CGG | 0.581634 | 6_2:+68308255 | Msa0925320:CDS |
| TAGATGATCCAAAGAAGTGG+TGG | 0.582459 | 6_2:+68308066 | Msa0925320:CDS |
| GGCGGCGGAAGGGTTGCCGT+CGG | 0.585509 | 6_2:-68304212 | None:intergenic |
| ATCTAGACTGAAAGAACTGG+AGG | 0.593122 | 6_2:+68309999 | Msa0925320:CDS |
| TGTTAAATCCAAACAAGCAA+AGG | 0.594758 | 6_2:+68310035 | Msa0925320:CDS |
| AAGCACAAAGACACCGGTGA+AGG | 0.595007 | 6_2:+68310607 | Msa0925320:CDS |
| AGCACAAAGACACCGGTGAA+GGG | 0.601351 | 6_2:+68310608 | Msa0925320:CDS |
| TCTAAGCCATAGCCCTTCAC+CGG | 0.602685 | 6_2:-68310620 | None:intergenic |
| TTTCGATGATTTGCGAATGG+TGG | 0.602822 | 6_2:-68304086 | None:intergenic |
| GGATTTCGATGATTTGCGAA+TGG | 0.603384 | 6_2:-68304089 | None:intergenic |
| TTCTAGATGATCCAAAGAAG+TGG | 0.615615 | 6_2:+68308063 | Msa0925320:CDS |
| GTTTGTTTGGGTTTAACAGG+CGG | 0.616497 | 6_2:-68308313 | None:intergenic |
| TTTCGTGATAGCAAACGCAA+TGG | 0.619076 | 6_2:+68308092 | Msa0925320:CDS |
| GCCTATTTGTCAAGTCCTTG+GGG | 0.619487 | 6_2:+68308035 | Msa0925320:CDS |
| AAGTCGTTTACCAAGTTCGG+TGG | 0.622664 | 6_2:+68310765 | Msa0925320:three_prime_UTR |
| TTTGCGAATGGTGGTTGTGG+CGG | 0.623603 | 6_2:-68304077 | None:intergenic |
| AAATCACCATGAAAGACAAG+AGG | 0.625790 | 6_2:-68304280 | None:intergenic |
| GTACCCTGACTTCAAGCGCA+AGG | 0.626123 | 6_2:+68308213 | Msa0925320:CDS |
| GCAAAATCCAGCTAAATGGT+GGG | 0.631610 | 6_2:+68310438 | Msa0925320:CDS |
| GAAGGCTGTACATTCAACAA+AGG | 0.632731 | 6_2:+68307732 | Msa0925320:CDS |
| TGGTGGTGGATCGGAGACGG+AGG | 0.633192 | 6_2:-68304039 | None:intergenic |
| GCAAAACCCAGCTAAATGGT+GGG | 0.633906 | 6_2:+68309771 | Msa0925320:CDS |
| GTGGGATAATAGAGTAGACA+AGG | 0.638003 | 6_2:+68309789 | Msa0925320:CDS |
| AGATGATCCAAAGAAGTGGT+GGG | 0.639731 | 6_2:+68308067 | Msa0925320:CDS |
| TCATCTAGAAGGTCGCCCCA+AGG | 0.647999 | 6_2:-68308050 | None:intergenic |
| TGAGGGTCAACTTTCTACTG+AGG | 0.657254 | 6_2:+68304351 | Msa0925320:CDS |
| GATTTCAAGCACAAAGACAC+CGG | 0.657516 | 6_2:+68310601 | Msa0925320:CDS |
| TGACACAAGGAAATCCTGGA+AGG | 0.668375 | 6_2:+68307684 | Msa0925320:CDS |
| AAACTGAGGAACATGACACA+AGG | 0.672639 | 6_2:+68307671 | Msa0925320:CDS |
| GGCATTAATTAATTACATGG+AGG | 0.675599 | 6_2:-68310815 | None:intergenic |
| TGTGTATAATCATAGCAACT+CGG | 0.677536 | 6_2:+68310853 | Msa0925320:three_prime_UTR |
| ACTGAGAAGGATCATGACCA+AGG | 0.689270 | 6_2:-68304249 | None:intergenic |
| GTGGGATAATAGATTAGACA+AGG | 0.691465 | 6_2:+68310456 | Msa0925320:CDS |
| AAAGCAGCCTTCTTAACACG+AGG | 0.696273 | 6_2:-68304981 | None:intergenic |
| TATCCATTCCGAGAAAACTG+AGG | 0.698752 | 6_2:+68307657 | Msa0925320:CDS |
| AAGGCGAGTGATGACAGTGG+CGG | 0.703637 | 6_2:-68304230 | None:intergenic |
| CCAAGGACTTGACAAATAGG+CGG | 0.713655 | 6_2:-68308033 | None:intergenic |
| ACCAAGGCGAGTGATGACAG+TGG | 0.758874 | 6_2:-68304233 | None:intergenic |
| AAGCTTAAGATGAAACTGCG+CGG | 0.762356 | 6_2:-68304311 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTATTATTTTTTGAAA+TGG | + | chr6_2:68305090-68305109 | Msa0925320:intron | 10.0% |
| !!! | GATTTATTATTTTTTGAAAT+GGG | + | chr6_2:68305091-68305110 | Msa0925320:intron | 10.0% |
| !! | TATTCTAATAAAATTTCTTT+GGG | - | chr6_2:68306920-68306939 | None:intergenic | 10.0% |
| !!! | ATTTAGTAATATTTTTGTTT+TGG | - | chr6_2:68307150-68307169 | None:intergenic | 10.0% |
| !! | CTATAAAAGTAAAAAAAAAA+AGG | - | chr6_2:68309027-68309046 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTACTTTTATAGT+TGG | + | chr6_2:68309028-68309047 | Msa0925320:intron | 10.0% |
| !!! | TTTTTTTTACTTTTATAGTT+GGG | + | chr6_2:68309029-68309048 | Msa0925320:intron | 10.0% |
| !! | ATTAAAAGTAAATATATCTT+TGG | - | chr6_2:68310167-68310186 | None:intergenic | 10.0% |
| !! | TGGTTTATGATATAATATTA+TGG | + | chr6_2:68305215-68305234 | Msa0925320:intron | 15.0% |
| !!! | CTATCTTTTATTATAGAAAT+AGG | - | chr6_2:68305399-68305418 | None:intergenic | 15.0% |
| !! | AATAAGCTTAAAACAATTTA+TGG | + | chr6_2:68305706-68305725 | Msa0925320:intron | 15.0% |
| !! | AATTTATGAATTCAATGTAT+TGG | - | chr6_2:68306836-68306855 | None:intergenic | 15.0% |
| !! | CTATTCTAATAAAATTTCTT+TGG | - | chr6_2:68306921-68306940 | None:intergenic | 15.0% |
| !!! | AGAAATTTTATTAGAATAGA+AGG | + | chr6_2:68306922-68306941 | Msa0925320:intron | 15.0% |
| !!! | ATGTTTTAATATTTTAGACT+TGG | - | chr6_2:68307227-68307246 | None:intergenic | 15.0% |
| !!! | TCTTTGATTATTATATTTTG+AGG | + | chr6_2:68308149-68308168 | Msa0925320:intron | 15.0% |
| !!! | CTTTGATTATTATATTTTGA+GGG | + | chr6_2:68308150-68308169 | Msa0925320:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr6_2:68308952-68308971 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr6_2:68308951-68308970 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr6_2:68308730-68308749 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr6_2:68308861-68308880 | Msa0925320:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr6_2:68308951-68308970 | Msa0925320:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr6_2:68308952-68308971 | Msa0925320:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr6_2:68308952-68308971 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr6_2:68308951-68308970 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr6_2:68308730-68308749 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr6_2:68308861-68308880 | Msa0925320:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr6_2:68308951-68308970 | Msa0925320:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr6_2:68308952-68308971 | Msa0925320:intron | 15.0% |
| !!! | TATTTCTGATATGATAAAAT+CGG | - | chr6_2:68309904-68309923 | None:intergenic | 15.0% |
| !! | AAATAGAAAAAGAAAAGAAA+TGG | - | chr6_2:68310277-68310296 | None:intergenic | 15.0% |
| !! | TATATCCGTAATATTCATTT+CGG | - | chr6_2:68303939-68303958 | None:intergenic | 20.0% |
| !! | ATATAAAACTACTTGCATTT+GGG | + | chr6_2:68303954-68303973 | Msa0925320:CDS | 20.0% |
| !! | ACTTGTGATAATTTGAAAAT+TGG | + | chr6_2:68304629-68304648 | Msa0925320:intron | 20.0% |
| !!! | GTATCTTTTATCATAGAAAA+AGG | - | chr6_2:68305641-68305660 | None:intergenic | 20.0% |
| !!! | TTATCTTTTATCACAGAAAT+AGG | - | chr6_2:68305948-68305967 | None:intergenic | 20.0% |
| !! | ACATATATCATAAGTTGTTT+CGG | + | chr6_2:68306024-68306043 | Msa0925320:intron | 20.0% |
| !!! | ACATTTTAAAAATGTACTCT+AGG | + | chr6_2:68306188-68306207 | Msa0925320:intron | 20.0% |
| !!! | ATGTAAAATTAGAAGTATGA+GGG | + | chr6_2:68306221-68306240 | Msa0925320:intron | 20.0% |
| !! | AATTGAGTATTATTGATCAA+GGG | - | chr6_2:68306324-68306343 | None:intergenic | 20.0% |
| !! | AAATTGAGTATTATTGATCA+AGG | - | chr6_2:68306325-68306344 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGAAGTACATATT+TGG | + | chr6_2:68306459-68306478 | Msa0925320:intron | 20.0% |
| !!! | TTTTGTAGAAGTACATATTT+GGG | + | chr6_2:68306460-68306479 | Msa0925320:intron | 20.0% |
| !!! | GATTTGGTTAAAATTAAGTT+TGG | - | chr6_2:68306607-68306626 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTGATATTGATT+TGG | - | chr6_2:68306623-68306642 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCTAAAAGAAAT+TGG | + | chr6_2:68306776-68306795 | Msa0925320:intron | 20.0% |
| !! | TTTAGATGCTAAAAGAAATT+GGG | + | chr6_2:68306777-68306796 | Msa0925320:intron | 20.0% |
| !!! | TCACAAAAATTTACTTTTCA+AGG | + | chr6_2:68306857-68306876 | Msa0925320:intron | 20.0% |
| !!! | AATTTTATTAGAATAGAAGG+AGG | + | chr6_2:68306925-68306944 | Msa0925320:intron | 20.0% |
| !!! | TTCTACTCAATTAATTTTGT+AGG | + | chr6_2:68307064-68307083 | Msa0925320:intron | 20.0% |
| !!! | AGTAATATTTTTGTTTTGGT+AGG | - | chr6_2:68307146-68307165 | None:intergenic | 20.0% |
| !! | AAAGGATACAAATCAAAAAA+TGG | - | chr6_2:68307772-68307791 | None:intergenic | 20.0% |
| !! | ATTTCAGAATACAAATATGA+AGG | - | chr6_2:68307834-68307853 | None:intergenic | 20.0% |
| !!! | AATTTTGTGTATCTAAATGT+AGG | + | chr6_2:68307851-68307870 | Msa0925320:intron | 20.0% |
| !!! | CTTTCAAAATCTTCATTTTT+TGG | - | chr6_2:68307882-68307901 | None:intergenic | 20.0% |
| !! | TAAATCAAATGGAATTACTT+TGG | - | chr6_2:68307987-68308006 | None:intergenic | 20.0% |
| !! | TATATTTGTATCTACTTAGT+AGG | + | chr6_2:68308180-68308199 | Msa0925320:intron | 20.0% |
| !!! | TTACTATCTTTTGTTTGTTT+GGG | - | chr6_2:68308328-68308347 | None:intergenic | 20.0% |
| !!! | TTTACTATCTTTTGTTTGTT+TGG | - | chr6_2:68308329-68308348 | None:intergenic | 20.0% |
| !! | AAACAAACAAAAGATAGTAA+AGG | + | chr6_2:68308328-68308347 | Msa0925320:CDS | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr6_2:68308600-68308619 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr6_2:68308601-68308620 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr6_2:68308695-68308714 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr6_2:68308600-68308619 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr6_2:68308601-68308620 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr6_2:68308695-68308714 | None:intergenic | 20.0% |
| !! | ACATTGATCAAACATAAAAA+TGG | - | chr6_2:68309615-68309634 | None:intergenic | 20.0% |
| !! | AAAAGAAAAGAAATGGAAAA+AGG | - | chr6_2:68310270-68310289 | None:intergenic | 20.0% |
| !! | AATTGAACTTGAACTTAATA+TGG | - | chr6_2:68310375-68310394 | None:intergenic | 20.0% |
| ! | GATATAAAACTACTTGCATT+TGG | + | chr6_2:68303953-68303972 | Msa0925320:CDS | 25.0% |
| ! | TAGAAAAAATGAACCCAATA+CGG | + | chr6_2:68304005-68304024 | Msa0925320:CDS | 25.0% |
| ! | AACAAAGTTGTAACATTGTA+TGG | - | chr6_2:68304445-68304464 | None:intergenic | 25.0% |
| !! | CTTCTAATAAAATTGGTGTT+TGG | - | chr6_2:68304548-68304567 | None:intergenic | 25.0% |
| !!! | ACCAATTTTATTAGAAGTGT+CGG | + | chr6_2:68304551-68304570 | Msa0925320:intron | 25.0% |
| !! | CACTGGTTATAATTTGAAAA+TGG | + | chr6_2:68304764-68304783 | Msa0925320:intron | 25.0% |
| !!! | TGTTGTTTAACATGTTTTTG+TGG | + | chr6_2:68304889-68304908 | Msa0925320:intron | 25.0% |
| !! | CAAAGTCTTAATTTTGTTGA+AGG | + | chr6_2:68304954-68304973 | Msa0925320:CDS | 25.0% |
| !! | TTCTTTAACTTTCCAAACAA+AGG | - | chr6_2:68305159-68305178 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | + | chr6_2:68305464-68305483 | Msa0925320:intron | 25.0% |
| !! | AACTTAATCGTTTTCCATAT+AGG | + | chr6_2:68305909-68305928 | Msa0925320:intron | 25.0% |
| !! | ATATGTTTTTCGTAAGCTTA+TGG | + | chr6_2:68305978-68305997 | Msa0925320:intron | 25.0% |
| ! | AACTTATGATATATGTCCAT+AGG | - | chr6_2:68306020-68306039 | None:intergenic | 25.0% |
| !! | GTTACTAGATAAGTTCTAAT+AGG | + | chr6_2:68306080-68306099 | Msa0925320:intron | 25.0% |
| ! | TCTAATAGGTAAATCTAAAC+AGG | + | chr6_2:68306094-68306113 | Msa0925320:intron | 25.0% |
| !!! | TTTTAAAAATGTACTCTAGG+AGG | + | chr6_2:68306191-68306210 | Msa0925320:intron | 25.0% |
| !! | ACTTCTAATTTTACATGCTT+AGG | - | chr6_2:68306217-68306236 | None:intergenic | 25.0% |
| !! | CATGTAAAATTAGAAGTATG+AGG | + | chr6_2:68306220-68306239 | Msa0925320:intron | 25.0% |
| !! | TGTAAAATTAGAAGTATGAG+GGG | + | chr6_2:68306222-68306241 | Msa0925320:intron | 25.0% |
| !! | TCTATTTTCTTGTAACCATT+CGG | + | chr6_2:68306265-68306284 | Msa0925320:intron | 25.0% |
| ! | AACATGCACTATATTTATGT+GGG | - | chr6_2:68306422-68306441 | None:intergenic | 25.0% |
| ! | AAACATGCACTATATTTATG+TGG | - | chr6_2:68306423-68306442 | None:intergenic | 25.0% |
| ! | ACATAAATATAGTGCATGTT+TGG | + | chr6_2:68306422-68306441 | Msa0925320:intron | 25.0% |
| ! | ATGCAATAGATACTAATTTC+AGG | - | chr6_2:68306511-68306530 | None:intergenic | 25.0% |
| ! | GCATTCTTCTCTAATAAATT+GGG | + | chr6_2:68306681-68306700 | Msa0925320:intron | 25.0% |
| ! | TCTAATAAATTGGGACAAAA+GGG | + | chr6_2:68306690-68306709 | Msa0925320:intron | 25.0% |
| ! | TACTGATACTCTATTAAACA+AGG | + | chr6_2:68306959-68306978 | Msa0925320:intron | 25.0% |
| !! | ATTAATTTTGTAGGATCGAA+AGG | + | chr6_2:68307073-68307092 | Msa0925320:intron | 25.0% |
| !! | TTAATTTTGTAGGATCGAAA+GGG | + | chr6_2:68307074-68307093 | Msa0925320:intron | 25.0% |
| ! | GACAACAATGATATTAAAGA+TGG | + | chr6_2:68307499-68307518 | Msa0925320:intron | 25.0% |
| ! | CATTATTGGCAAATGATAAA+AGG | - | chr6_2:68307805-68307824 | None:intergenic | 25.0% |
| ! | TGGCTGTAAAATAAATCAAA+TGG | - | chr6_2:68307998-68308017 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTGTGATATAGT+TGG | + | chr6_2:68308396-68308415 | Msa0925320:intron | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr6_2:68308567-68308586 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr6_2:68308889-68308908 | Msa0925320:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr6_2:68308890-68308909 | Msa0925320:intron | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr6_2:68308567-68308586 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr6_2:68308889-68308908 | Msa0925320:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr6_2:68308890-68308909 | Msa0925320:intron | 25.0% |
| ! | ATACTTAACCCTTTATAGTT+TGG | + | chr6_2:68309580-68309599 | Msa0925320:intron | 25.0% |
| ! | AAGCATGAAATAAACTTGTA+GGG | - | chr6_2:68309852-68309871 | None:intergenic | 25.0% |
| ! | TAAGCATGAAATAAACTTGT+AGG | - | chr6_2:68309853-68309872 | None:intergenic | 25.0% |
| ! | ATAGAAAAAGACACGAAAAA+AGG | - | chr6_2:68310339-68310358 | None:intergenic | 25.0% |
| !!! | GAAGGCATTAATTAATTACA+TGG | - | chr6_2:68310821-68310840 | None:intergenic | 25.0% |
| ! | ATTCAGATAAAAACGTATGT+GGG | - | chr6_2:68310924-68310943 | None:intergenic | 25.0% |
| ! | AATTCAGATAAAAACGTATG+TGG | - | chr6_2:68310925-68310944 | None:intergenic | 25.0% |
| ! | TGAGCATTATTATACTTATG+AGG | + | chr6_2:68310946-68310965 | Msa0925320:three_prime_UTR | 25.0% |
| ! | GTTTGTTAACAGTACCAATT+AGG | - | chr6_2:68304171-68304190 | None:intergenic | 30.0% |
| TAATGATGTTGTTCATGTTG+AGG | + | chr6_2:68304333-68304352 | Msa0925320:CDS | 30.0% | |
| AATGATGTTGTTCATGTTGA+GGG | + | chr6_2:68304334-68304353 | Msa0925320:CDS | 30.0% | |
| TGTAACATTGTATGGTATGA+AGG | - | chr6_2:68304437-68304456 | None:intergenic | 30.0% | |
| CACTAGTAATAAATGTGTGT+TGG | + | chr6_2:68304511-68304530 | Msa0925320:intron | 30.0% | |
| ACCGACACTTCTAATAAAAT+TGG | - | chr6_2:68304555-68304574 | None:intergenic | 30.0% | |
| ACTTCTAATAAAGCCATGTT+CGG | - | chr6_2:68304686-68304705 | None:intergenic | 30.0% | |
| ! | CAGGACTCTAATTTTATTAG+AGG | + | chr6_2:68304839-68304858 | Msa0925320:intron | 30.0% |
| !! | GGTTTTTAATTGTGTGTTGT+TGG | + | chr6_2:68304910-68304929 | Msa0925320:intron | 30.0% |
| TAAGGAGAAATCAGATATTG+AGG | + | chr6_2:68305010-68305029 | Msa0925320:CDS | 30.0% | |
| !!! | TTTTTGAAATGGGAAAGTTG+AGG | + | chr6_2:68305101-68305120 | Msa0925320:intron | 30.0% |
| AAAGTTGAGGCAATAGAAAT+TGG | + | chr6_2:68305114-68305133 | Msa0925320:intron | 30.0% | |
| TGACATCACATATTGATCTA+AGG | + | chr6_2:68305302-68305321 | Msa0925320:intron | 30.0% | |
| !! | ATTAACTTGTGTATCCAAAC+AGG | - | chr6_2:68305329-68305348 | None:intergenic | 30.0% |
| AAATTGTTTGAGAGAGCTTA+TGG | - | chr6_2:68305518-68305537 | None:intergenic | 30.0% | |
| AATCAGAGTCAGATTCTATT+TGG | - | chr6_2:68305582-68305601 | None:intergenic | 30.0% | |
| CTTATTTCCAAAAATTCTCC+AGG | - | chr6_2:68305692-68305711 | None:intergenic | 30.0% | |
| ! | AAACACTTGTGAAACTGTTT+TGG | - | chr6_2:68305761-68305780 | None:intergenic | 30.0% |
| TGAAATACGTCAATCTAAAC+AGG | + | chr6_2:68305797-68305816 | Msa0925320:intron | 30.0% | |
| ! | GGAAAACGATTAAGTTGTAA+GGG | - | chr6_2:68305905-68305924 | None:intergenic | 30.0% |
| ! | TGGAAAACGATTAAGTTGTA+AGG | - | chr6_2:68305906-68305925 | None:intergenic | 30.0% |
| GCTATACATAAACACCTATA+TGG | - | chr6_2:68305926-68305945 | None:intergenic | 30.0% | |
| AAATAAGCTGAAACAACCTA+TGG | + | chr6_2:68306001-68306020 | Msa0925320:intron | 30.0% | |
| AACCACTTGTGAAACTATTT+GGG | - | chr6_2:68306058-68306077 | None:intergenic | 30.0% | |
| TAACCACTTGTGAAACTATT+TGG | - | chr6_2:68306059-68306078 | None:intergenic | 30.0% | |
| CTTTGAATATGCATAGTGTT+AGG | + | chr6_2:68306152-68306171 | Msa0925320:intron | 30.0% | |
| GGCATTCTTCTCTAATAAAT+TGG | + | chr6_2:68306680-68306699 | Msa0925320:intron | 30.0% | |
| CTCTAATAAATTGGGACAAA+AGG | + | chr6_2:68306689-68306708 | Msa0925320:intron | 30.0% | |
| ! | GAGTAGAATCCTTCAATTTT+GGG | - | chr6_2:68307052-68307071 | None:intergenic | 30.0% |
| ! | TGAGTAGAATCCTTCAATTT+TGG | - | chr6_2:68307053-68307072 | None:intergenic | 30.0% |
| ! | TAATTTTGTAGGATCGAAAG+GGG | + | chr6_2:68307075-68307094 | Msa0925320:intron | 30.0% |
| ! | TATGTTTAAGCTTTGTGACT+AGG | - | chr6_2:68307313-68307332 | None:intergenic | 30.0% |
| ! | TGGATTTTCATGATTCTGAT+CGG | + | chr6_2:68307470-68307489 | Msa0925320:intron | 30.0% |
| TGAAATAAAGTCATCAGAGA+AGG | + | chr6_2:68307633-68307652 | Msa0925320:CDS | 30.0% | |
| TTTATTAATGACATCCTTCC+AGG | - | chr6_2:68307701-68307720 | None:intergenic | 30.0% | |
| TCATTAATAAACCCAGTCAA+TGG | + | chr6_2:68307710-68307729 | Msa0925320:CDS | 30.0% | |
| ATAAAAGGAGGGCAAAATAA+AGG | - | chr6_2:68307790-68307809 | None:intergenic | 30.0% | |
| ATTGGCAAATGATAAAAGGA+GGG | - | chr6_2:68307801-68307820 | None:intergenic | 30.0% | |
| TATTGGCAAATGATAAAAGG+AGG | - | chr6_2:68307802-68307821 | None:intergenic | 30.0% | |
| ! | TATGAAGGATGTGTCATTAT+TGG | - | chr6_2:68307819-68307838 | None:intergenic | 30.0% |
| !! | TGAAGATTTTGAAAGCAAGA+CGG | + | chr6_2:68307887-68307906 | Msa0925320:CDS | 30.0% |
| TCAAATATTTGCATTAGCTC+TGG | + | chr6_2:68307939-68307958 | Msa0925320:intron | 30.0% | |
| ! | TTTGTTTGTTTGGGTTTAAC+AGG | - | chr6_2:68308319-68308338 | None:intergenic | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr6_2:68308983-68309002 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr6_2:68308982-68309001 | None:intergenic | 30.0% |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr6_2:68308568-68308587 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr6_2:68308827-68308846 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr6_2:68308982-68309001 | Msa0925320:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr6_2:68308983-68309002 | Msa0925320:intron | 30.0% |
| TTCTAGTCCCTATAAAATAG+CGG | + | chr6_2:68308497-68308516 | Msa0925320:intron | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr6_2:68308568-68308587 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr6_2:68308827-68308846 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr6_2:68308982-68309001 | Msa0925320:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr6_2:68308983-68309002 | Msa0925320:intron | 30.0% |
| AAGAGAAAAGAAACGGAAAA+CGG | - | chr6_2:68309680-68309699 | None:intergenic | 30.0% | |
| AGATAGGAAGAGAAAAGAAA+CGG | - | chr6_2:68309687-68309706 | None:intergenic | 30.0% | |
| TATGGTGATAAAACAGAGAT+AGG | - | chr6_2:68309703-68309722 | None:intergenic | 30.0% | |
| ! | TAAGCATCTCAAATTGGTTT+AGG | + | chr6_2:68309724-68309743 | Msa0925320:intron | 30.0% |
| TGTTAAATCCAAACAAGCAA+AGG | + | chr6_2:68310035-68310054 | Msa0925320:CDS | 30.0% | |
| ! | AACTCTATCACAATTTGCTT+AGG | - | chr6_2:68310107-68310126 | None:intergenic | 30.0% |
| TAAGCAAATTGTGATAGAGT+TGG | + | chr6_2:68310106-68310125 | Msa0925320:intron | 30.0% | |
| !! | TATCTTTGGTTTGACTTTGA+TGG | - | chr6_2:68310153-68310172 | None:intergenic | 30.0% |
| AAAAAGGACATGAGAATCTT+GGG | - | chr6_2:68310254-68310273 | None:intergenic | 30.0% | |
| ! | AAGTTCAATTTTTCCCAACT+TGG | + | chr6_2:68310385-68310404 | Msa0925320:intron | 30.0% |
| ! | AATTTTTCCCAACTTGGTTT+AGG | + | chr6_2:68310391-68310410 | Msa0925320:intron | 30.0% |
| TAGCGTGAATTAAACTTGTA+GGG | - | chr6_2:68310516-68310535 | None:intergenic | 30.0% | |
| ATAGCGTGAATTAAACTTGT+AGG | - | chr6_2:68310517-68310536 | None:intergenic | 30.0% | |
| CCAAATATCAGCTTAATGAA+CGG | + | chr6_2:68310717-68310736 | Msa0925320:exon | 30.0% | |
| CAAATATCAGCTTAATGAAC+GGG | + | chr6_2:68310718-68310737 | Msa0925320:exon | 30.0% | |
| GGCATTAATTAATTACATGG+AGG | - | chr6_2:68310818-68310837 | None:intergenic | 30.0% | |
| ! | TACACATCAGAACTTTAAGA+AGG | - | chr6_2:68310839-68310858 | None:intergenic | 30.0% |
| TGTGTATAATCATAGCAACT+CGG | + | chr6_2:68310853-68310872 | Msa0925320:three_prime_UTR | 30.0% | |
| ATACTTATGAGGCTAATCAT+TGG | + | chr6_2:68310957-68310976 | Msa0925320:three_prime_UTR | 30.0% | |
| AATGTTGAAAAAACAGTCAG+TGG | - | chr6_2:68311001-68311020 | None:intergenic | 30.0% | |
| AGGGACCGAAATGAATATTA+CGG | + | chr6_2:68303931-68303950 | Msa0925320:exon | 35.0% | |
| TAAAACTACTTGCATTTGGG+AGG | + | chr6_2:68303957-68303976 | Msa0925320:CDS | 35.0% | |
| AAAACTACTTGCATTTGGGA+GGG | + | chr6_2:68303958-68303977 | Msa0925320:CDS | 35.0% | |
| !!! | GTTTTGGAAACTCATCGAAA+GGG | + | chr6_2:68303980-68303999 | Msa0925320:CDS | 35.0% |
| !!! | TTCGGTTGGTTTTTGGAATT+TGG | - | chr6_2:68304113-68304132 | None:intergenic | 35.0% |
| !! | AACAGTACCAATTAGGTTGA+CGG | - | chr6_2:68304164-68304183 | None:intergenic | 35.0% |
| TTGATTCCTCTTGTCTTTCA+TGG | + | chr6_2:68304274-68304293 | Msa0925320:CDS | 35.0% | |
| AAATCACCATGAAAGACAAG+AGG | - | chr6_2:68304283-68304302 | None:intergenic | 35.0% | |
| TCTTGTCTTTCATGGTGATT+TGG | + | chr6_2:68304282-68304301 | Msa0925320:CDS | 35.0% | |
| ACCTCAACAATATCAGTTTC+AGG | + | chr6_2:68304399-68304418 | Msa0925320:CDS | 35.0% | |
| ACCTGAAACTGATATTGTTG+AGG | - | chr6_2:68304403-68304422 | None:intergenic | 35.0% | |
| TGTTATGACATGACATGTGT+TGG | + | chr6_2:68304797-68304816 | Msa0925320:intron | 35.0% | |
| GAGAAATCAGATATTGAGGA+TGG | + | chr6_2:68305014-68305033 | Msa0925320:CDS | 35.0% | |
| AACAAAGGCTTAACATCACT+TGG | - | chr6_2:68305144-68305163 | None:intergenic | 35.0% | |
| AGTGATGTTAAGCCTTTGTT+TGG | + | chr6_2:68305144-68305163 | Msa0925320:intron | 35.0% | |
| ATTGTCACTACATAGTGAGT+TGG | + | chr6_2:68305183-68305202 | Msa0925320:intron | 35.0% | |
| ! | TAGTGAGTTGGATCGAAATA+TGG | + | chr6_2:68305195-68305214 | Msa0925320:intron | 35.0% |
| ! | TATTGATCTAAGGTCCTGTT+TGG | + | chr6_2:68305312-68305331 | Msa0925320:intron | 35.0% |
| TTTCATAAGCTATCCTGAAG+AGG | + | chr6_2:68305434-68305453 | Msa0925320:intron | 35.0% | |
| CTTATTTCCATAACCTCTTC+AGG | - | chr6_2:68305450-68305469 | None:intergenic | 35.0% | |
| GAGTCAGATTCTATTTGGAT+TGG | - | chr6_2:68305577-68305596 | None:intergenic | 35.0% | |
| ! | AAGCTATCCTGGAGAATTTT+TGG | + | chr6_2:68305682-68305701 | Msa0925320:intron | 35.0% |
| AGTTGGAAATCATAGAGTCA+GGG | - | chr6_2:68305823-68305842 | None:intergenic | 35.0% | |
| AAGTTGGAAATCATAGAGTC+AGG | - | chr6_2:68305824-68305843 | None:intergenic | 35.0% | |
| ATGCATAGTGTTAGGAATGT+AGG | + | chr6_2:68306160-68306179 | Msa0925320:intron | 35.0% | |
| CAGTAGAAAGATTGAGAAGA+AGG | - | chr6_2:68306359-68306378 | None:intergenic | 35.0% | |
| ! | ATAGTGCATGTTTGGTTTCA+AGG | + | chr6_2:68306430-68306449 | Msa0925320:intron | 35.0% |
| ! | ACTAATTTCAGGTCAAAACG+AGG | - | chr6_2:68306500-68306519 | None:intergenic | 35.0% |
| ACCACACTTCAATAATTGAC+TGG | + | chr6_2:68306659-68306678 | Msa0925320:intron | 35.0% | |
| ATCGCATGAAAACGTGAAAT+CGG | - | chr6_2:68307375-68307394 | None:intergenic | 35.0% | |
| TGAGTGAAATCGCAAAATTG+TGG | + | chr6_2:68307450-68307469 | Msa0925320:intron | 35.0% | |
| ! | GGATTTTCATGATTCTGATC+GGG | + | chr6_2:68307471-68307490 | Msa0925320:intron | 35.0% |
| !! | GAATTTTGTTTGTGTGATGC+TGG | + | chr6_2:68307541-68307560 | Msa0925320:intron | 35.0% |
| !! | TATGAGCTCTGATAAGCTTT+TGG | + | chr6_2:68307570-68307589 | Msa0925320:intron | 35.0% |
| TAATAAACCCAGTCAATGGA+AGG | + | chr6_2:68307714-68307733 | Msa0925320:CDS | 35.0% | |
| ACTTCTTTGGATCATCTAGA+AGG | - | chr6_2:68308064-68308083 | None:intergenic | 35.0% | |
| TTCTAGATGATCCAAAGAAG+TGG | + | chr6_2:68308063-68308082 | Msa0925320:CDS | 35.0% | |
| ! | ATCGGTAATGATTGATGACT+TGG | + | chr6_2:68308115-68308134 | Msa0925320:intron | 35.0% |
| ! | TCGGTAATGATTGATGACTT+GGG | + | chr6_2:68308116-68308135 | Msa0925320:intron | 35.0% |
| ! | AGTCTAGATAAAACCGACTT+TGG | - | chr6_2:68308271-68308290 | None:intergenic | 35.0% |
| ! | TTTATCTAGACTGAAAGCAC+TGG | + | chr6_2:68308279-68308298 | Msa0925320:CDS | 35.0% |
| TGGAACAAAGAAATTCTCAG+AGG | + | chr6_2:68308416-68308435 | Msa0925320:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr6_2:68308967-68308986 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr6_2:68308967-68308986 | Msa0925320:intron | 35.0% | |
| !! | TACAAGGCCGCTATTTTATA+GGG | - | chr6_2:68309072-68309091 | None:intergenic | 35.0% |
| !! | TTACAAGGCCGCTATTTTAT+AGG | - | chr6_2:68309073-68309092 | None:intergenic | 35.0% |
| AAGTAGGGACTAAACTTACA+AGG | - | chr6_2:68308967-68308986 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr6_2:68308967-68308986 | Msa0925320:intron | 35.0% | |
| GAGCATCTCCAAACTATAAA+GGG | - | chr6_2:68309591-68309610 | None:intergenic | 35.0% | |
| ! | AGAGCATCTCCAAACTATAA+AGG | - | chr6_2:68309592-68309611 | None:intergenic | 35.0% |
| ! | CCAATTTGAGATGCTTAGTA+TGG | - | chr6_2:68309721-68309740 | None:intergenic | 35.0% |
| CCATACTAAGCATCTCAAAT+TGG | + | chr6_2:68309718-68309737 | Msa0925320:intron | 35.0% | |
| TATTATCCCACCATTTAGCT+GGG | - | chr6_2:68309780-68309799 | None:intergenic | 35.0% | |
| TCCATATTCTGCTTTGTCTT+TGG | + | chr6_2:68309816-68309835 | Msa0925320:intron | 35.0% | |
| CCATATTCTGCTTTGTCTTT+GGG | + | chr6_2:68309817-68309836 | Msa0925320:intron | 35.0% | |
| GTATCTTTGTGCTTGAAATC+CGG | - | chr6_2:68309937-68309956 | None:intergenic | 35.0% | |
| GATTTCAAGCACAAAGATAC+TGG | + | chr6_2:68309937-68309956 | Msa0925320:CDS | 35.0% | |
| !! | AAGCACAAAGATACTGGTTT+AGG | + | chr6_2:68309943-68309962 | Msa0925320:CDS | 35.0% |
| !! | AGCACAAAGATACTGGTTTA+GGG | + | chr6_2:68309944-68309963 | Msa0925320:CDS | 35.0% |
| TTCATCTAGACTGAAAGAAC+TGG | + | chr6_2:68309996-68310015 | Msa0925320:CDS | 35.0% | |
| TTTACTGTCCTTTGCTTGTT+TGG | - | chr6_2:68310046-68310065 | None:intergenic | 35.0% | |
| AAACAAGCAAAGGACAGTAA+AGG | + | chr6_2:68310045-68310064 | Msa0925320:CDS | 35.0% | |
| GAAAAAGGACATGAGAATCT+TGG | - | chr6_2:68310255-68310274 | None:intergenic | 35.0% | |
| TTCATCACCTAAACCAAGTT+GGG | - | chr6_2:68310401-68310420 | None:intergenic | 35.0% | |
| ATTCATCACCTAAACCAAGT+TGG | - | chr6_2:68310402-68310421 | None:intergenic | 35.0% | |
| ! | ATTTTGCAGCAAATCATTCC+AGG | - | chr6_2:68310425-68310444 | None:intergenic | 35.0% |
| GTGGGATAATAGATTAGACA+AGG | + | chr6_2:68310456-68310475 | Msa0925320:CDS | 35.0% | |
| TCACATCAGAAGAATCCAAA+AGG | + | chr6_2:68310574-68310593 | Msa0925320:intron | 35.0% | |
| !! | GTTTCTGCACTTTGTTGTTT+CGG | - | chr6_2:68310688-68310707 | None:intergenic | 35.0% |
| CCGTTCATTAAGCTGATATT+TGG | - | chr6_2:68310720-68310739 | None:intergenic | 35.0% | |
| !! | GCTAATCATTGGTCATTTTC+TGG | + | chr6_2:68310968-68310987 | Msa0925320:three_prime_UTR | 35.0% |
| !!! | GGTTTTGGAAACTCATCGAA+AGG | + | chr6_2:68303979-68303998 | Msa0925320:CDS | 40.0% |
| ! | TTTCGATGATTTGCGAATGG+TGG | - | chr6_2:68304089-68304108 | None:intergenic | 40.0% |
| ! | GGATTTCGATGATTTGCGAA+TGG | - | chr6_2:68304092-68304111 | None:intergenic | 40.0% |
| !!! | ATGGGATTTCGGTTGGTTTT+TGG | - | chr6_2:68304120-68304139 | None:intergenic | 40.0% |
| !! | TTTGGGTTGGAATGGGATTT+CGG | - | chr6_2:68304131-68304150 | None:intergenic | 40.0% |
| GTGGAAGTTTGGAAGTGAAT+AGG | - | chr6_2:68304193-68304212 | None:intergenic | 40.0% | |
| AGAGGAATCAAGAACTGAGA+AGG | - | chr6_2:68304265-68304284 | None:intergenic | 40.0% | |
| AAGCTTAAGATGAAACTGCG+CGG | - | chr6_2:68304314-68304333 | None:intergenic | 40.0% | |
| ATATGTCAGTGTGTCAGTCT+CGG | - | chr6_2:68304605-68304624 | None:intergenic | 40.0% | |
| !! | TTGGTGTTGTTGCTAGGTTA+AGG | + | chr6_2:68304929-68304948 | Msa0925320:intron | 40.0% |
| AGGTTATCCTCGTGTTAAGA+AGG | + | chr6_2:68304974-68304993 | Msa0925320:CDS | 40.0% | |
| ! | GAAGGCTGCTTTAACTTCTA+AGG | + | chr6_2:68304992-68305011 | Msa0925320:CDS | 40.0% |
| !! | AAGTTTTGTCCCACTAAGTG+GGG | - | chr6_2:68305265-68305284 | None:intergenic | 40.0% |
| !! | CAAGTTTTGTCCCACTAAGT+GGG | - | chr6_2:68305266-68305285 | None:intergenic | 40.0% |
| !! | TCAAGTTTTGTCCCACTAAG+TGG | - | chr6_2:68305267-68305286 | None:intergenic | 40.0% |
| AAGCTATCCTGAAGAGGTTA+TGG | + | chr6_2:68305440-68305459 | Msa0925320:intron | 40.0% | |
| AACTGCTTCATAAGCTATCC+TGG | + | chr6_2:68305671-68305690 | Msa0925320:intron | 40.0% | |
| !! | CTATGAGGCTTTAGAGAAGT+TGG | - | chr6_2:68305840-68305859 | None:intergenic | 40.0% |
| GCCTCATAGAATATGCACTA+AGG | + | chr6_2:68305851-68305870 | Msa0925320:intron | 40.0% | |
| GCCTTAGTGCATATTCTATG+AGG | - | chr6_2:68305855-68305874 | None:intergenic | 40.0% | |
| CTCCCAAATAGTTTCACAAG+TGG | + | chr6_2:68306053-68306072 | Msa0925320:intron | 40.0% | |
| !! | ACCTGCTTTTGCAGTTGTAT+AGG | + | chr6_2:68306292-68306311 | Msa0925320:intron | 40.0% |
| ! | TGTTCTAGACCCTAACACAT+AGG | + | chr6_2:68306384-68306403 | Msa0925320:intron | 40.0% |
| ! | GTTCTAGACCCTAACACATA+GGG | + | chr6_2:68306385-68306404 | Msa0925320:intron | 40.0% |
| ! | TTTCAGGTCAAAACGAGGTT+TGG | - | chr6_2:68306495-68306514 | None:intergenic | 40.0% |
| GCCAGTCAATTATTGAAGTG+TGG | - | chr6_2:68306663-68306682 | None:intergenic | 40.0% | |
| GAATAGAAGGAGGTGAAACA+CGG | + | chr6_2:68306935-68306954 | Msa0925320:intron | 40.0% | |
| AAATCTCGCATCAGATCGAA+AGG | + | chr6_2:68306994-68307013 | Msa0925320:intron | 40.0% | |
| AATCTCGCATCAGATCGAAA+GGG | + | chr6_2:68306995-68307014 | Msa0925320:intron | 40.0% | |
| AGATCGCAACCCAAAATTGA+AGG | + | chr6_2:68307040-68307059 | Msa0925320:intron | 40.0% | |
| TAAACATAAACGACTCAGCC+AGG | + | chr6_2:68307325-68307344 | Msa0925320:intron | 40.0% | |
| !! | CCAGGATCTTTAGAATCGTA+CGG | + | chr6_2:68307343-68307362 | Msa0925320:intron | 40.0% |
| TCGCATGAAAACGTGAAATC+GGG | - | chr6_2:68307374-68307393 | None:intergenic | 40.0% | |
| ! | GTTTTCATGCGATTTCACAG+CGG | + | chr6_2:68307382-68307401 | Msa0925320:intron | 40.0% |
| TCAGGATTCTATTCACGATC+CGG | + | chr6_2:68307416-68307435 | Msa0925320:intron | 40.0% | |
| ATTCTATTCACGATCCGGAT+CGG | + | chr6_2:68307421-68307440 | Msa0925320:intron | 40.0% | |
| TATCCATTCCGAGAAAACTG+AGG | + | chr6_2:68307657-68307676 | Msa0925320:CDS | 40.0% | |
| ! | GTCATGTTCCTCAGTTTTCT+CGG | - | chr6_2:68307668-68307687 | None:intergenic | 40.0% |
| AAACTGAGGAACATGACACA+AGG | + | chr6_2:68307671-68307690 | Msa0925320:CDS | 40.0% | |
| AACATGACACAAGGAAATCC+TGG | + | chr6_2:68307680-68307699 | Msa0925320:CDS | 40.0% | |
| GAAGGCTGTACATTCAACAA+AGG | + | chr6_2:68307732-68307751 | Msa0925320:CDS | 40.0% | |
| !! | GATTTTGAAAGCAAGACGGA+AGG | + | chr6_2:68307891-68307910 | Msa0925320:CDS | 40.0% |
| TAGATGATCCAAAGAAGTGG+TGG | + | chr6_2:68308066-68308085 | Msa0925320:CDS | 40.0% | |
| AGATGATCCAAAGAAGTGGT+GGG | + | chr6_2:68308067-68308086 | Msa0925320:CDS | 40.0% | |
| TTTCGTGATAGCAAACGCAA+TGG | + | chr6_2:68308092-68308111 | Msa0925320:CDS | 40.0% | |
| TGATAGCAAACGCAATGGAT+CGG | + | chr6_2:68308097-68308116 | Msa0925320:CDS | 40.0% | |
| AGGATGGAAATGTTTCCATC+TGG | + | chr6_2:68308233-68308252 | Msa0925320:CDS | 40.0% | |
| ! | GTTTGTTTGGGTTTAACAGG+CGG | - | chr6_2:68308316-68308335 | None:intergenic | 40.0% |
| ! | GTTTTGCAGCAAATCATTCC+AGG | - | chr6_2:68309758-68309777 | None:intergenic | 40.0% |
| CTATTATCCCACCATTTAGC+TGG | - | chr6_2:68309781-68309800 | None:intergenic | 40.0% | |
| GTGGGATAATAGAGTAGACA+AGG | + | chr6_2:68309789-68309808 | Msa0925320:CDS | 40.0% | |
| CCCAAAGACAAAGCAGAATA+TGG | - | chr6_2:68309820-68309839 | None:intergenic | 40.0% | |
| TCAGAAATATGCAAGAGCTC+CGG | + | chr6_2:68309915-68309934 | Msa0925320:intron | 40.0% | |
| AGTCTAGATGAAACCCAACT+TGG | - | chr6_2:68309988-68310007 | None:intergenic | 40.0% | |
| ATCTAGACTGAAAGAACTGG+AGG | + | chr6_2:68309999-68310018 | Msa0925320:CDS | 40.0% | |
| TTGGTTTAGGTGATGAATCC+TGG | + | chr6_2:68310404-68310423 | Msa0925320:intron | 40.0% | |
| TGCTGCAAAATCCAGCTAAA+TGG | + | chr6_2:68310434-68310453 | Msa0925320:CDS | 40.0% | |
| TGCAAAATCCAGCTAAATGG+TGG | + | chr6_2:68310437-68310456 | Msa0925320:CDS | 40.0% | |
| GCAAAATCCAGCTAAATGGT+GGG | + | chr6_2:68310438-68310457 | Msa0925320:CDS | 40.0% | |
| CTATTATCCCACCATTTAGC+TGG | - | chr6_2:68309781-68309800 | None:intergenic | 40.0% | |
| ! | ACCACATTTTCTGCTGTCAT+TGG | + | chr6_2:68310481-68310500 | Msa0925320:intron | 40.0% |
| ACCAATGACAGCAGAAAATG+TGG | - | chr6_2:68310485-68310504 | None:intergenic | 40.0% | |
| GTGTCTTTGTGCTTGAAATC+GGG | - | chr6_2:68310601-68310620 | None:intergenic | 40.0% | |
| GGTGTCTTTGTGCTTGAAAT+CGG | - | chr6_2:68310602-68310621 | None:intergenic | 40.0% | |
| GATTTCAAGCACAAAGACAC+CGG | + | chr6_2:68310601-68310620 | Msa0925320:CDS | 40.0% | |
| !! | AATTTTGGCAACACCCAACT+TGG | - | chr6_2:68310652-68310671 | None:intergenic | 40.0% |
| !! | CTTTGTTGTTTCGGCTTCAA+CGG | - | chr6_2:68310679-68310698 | None:intergenic | 40.0% |
| AACAAAGTGCAGAAACTAGC+TGG | + | chr6_2:68310692-68310711 | Msa0925320:CDS | 40.0% | |
| CTGAAGTCGTTTACCAAGTT+CGG | + | chr6_2:68310762-68310781 | Msa0925320:three_prime_UTR | 40.0% | |
| ! | ACTTGCATTTGGGAGGGTTT+TGG | + | chr6_2:68303964-68303983 | Msa0925320:CDS | 45.0% |
| GGAGTAAAACTCGCCGTATT+GGG | - | chr6_2:68304021-68304040 | None:intergenic | 45.0% | |
| AGGAGTAAAACTCGCCGTAT+TGG | - | chr6_2:68304022-68304041 | None:intergenic | 45.0% | |
| ! | TGATTTGCGAATGGTGGTTG+TGG | - | chr6_2:68304083-68304102 | None:intergenic | 45.0% |
| !! | ACCAATTAGGTTGACGGAGT+TGG | - | chr6_2:68304158-68304177 | None:intergenic | 45.0% |
| ACTGAGAAGGATCATGACCA+AGG | - | chr6_2:68304252-68304271 | None:intergenic | 45.0% | |
| TGAGGGTCAACTTTCTACTG+AGG | + | chr6_2:68304351-68304370 | Msa0925320:CDS | 45.0% | |
| TTGTTGTCAGACACCGAACA+TGG | + | chr6_2:68304670-68304689 | Msa0925320:intron | 45.0% | |
| ACATGTCAGTGTGTCTGTGT+CGG | - | chr6_2:68304742-68304761 | None:intergenic | 45.0% | |
| !! | GTGTTGTTGGTGTTGTTGCT+AGG | + | chr6_2:68304923-68304942 | Msa0925320:intron | 45.0% |
| AAAGCAGCCTTCTTAACACG+AGG | - | chr6_2:68304984-68305003 | None:intergenic | 45.0% | |
| !! | AGTTTTGTCCCACTAAGTGG+GGG | - | chr6_2:68305264-68305283 | None:intergenic | 45.0% |
| CAAAGTAGCTTCACAGAAGC+TGG | - | chr6_2:68306137-68306156 | None:intergenic | 45.0% | |
| CAAAAGCAGGTACAACCGAA+TGG | - | chr6_2:68306283-68306302 | None:intergenic | 45.0% | |
| GCCTATACAACTGCAAAAGC+AGG | - | chr6_2:68306296-68306315 | None:intergenic | 45.0% | |
| TCTTGCGTCCCTATGTGTTA+GGG | - | chr6_2:68306396-68306415 | None:intergenic | 45.0% | |
| TTCTTGCGTCCCTATGTGTT+AGG | - | chr6_2:68306397-68306416 | None:intergenic | 45.0% | |
| !! | AAGGTCCTTAAAAAGTGCCC+TGG | + | chr6_2:68306876-68306895 | Msa0925320:intron | 45.0% |
| !! | AGGTCCTTAAAAAGTGCCCT+GGG | + | chr6_2:68306877-68306896 | Msa0925320:intron | 45.0% |
| ATCTCGCATCAGATCGAAAG+GGG | + | chr6_2:68306996-68307015 | Msa0925320:intron | 45.0% | |
| TTGGTAGGATCGTTCGATCT+TGG | - | chr6_2:68307131-68307150 | None:intergenic | 45.0% | |
| ! | CCGTACGATTCTAAAGATCC+TGG | - | chr6_2:68307346-68307365 | None:intergenic | 45.0% |
| ! | ACAGCGGTTTTACTCAACTC+AGG | + | chr6_2:68307398-68307417 | Msa0925320:intron | 45.0% |
| ! | GTTCCTCAGTTTTCTCGGAA+TGG | - | chr6_2:68307663-68307682 | None:intergenic | 45.0% |
| TGACACAAGGAAATCCTGGA+AGG | + | chr6_2:68307684-68307703 | Msa0925320:CDS | 45.0% | |
| ! | TGTACAGCCTTCCATTGACT+GGG | - | chr6_2:68307724-68307743 | None:intergenic | 45.0% |
| ATGTACAGCCTTCCATTGAC+TGG | - | chr6_2:68307725-68307744 | None:intergenic | 45.0% | |
| !!! | CTCTGGCTCTTTTCGTTGTT+TGG | + | chr6_2:68307956-68307975 | Msa0925320:intron | 45.0% |
| CCAAGGACTTGACAAATAGG+CGG | - | chr6_2:68308036-68308055 | None:intergenic | 45.0% | |
| CGCCTATTTGTCAAGTCCTT+GGG | + | chr6_2:68308034-68308053 | Msa0925320:CDS | 45.0% | |
| GCCTATTTGTCAAGTCCTTG+GGG | + | chr6_2:68308035-68308054 | Msa0925320:CDS | 45.0% | |
| CGAAAATCCCACCACTTCTT+TGG | - | chr6_2:68308077-68308096 | None:intergenic | 45.0% | |
| ! | TGTTTCCATCTGGCTTGACA+AGG | + | chr6_2:68308243-68308262 | Msa0925320:CDS | 45.0% |
| AGAAACGGAAAACGGACATG+AGG | - | chr6_2:68309672-68309691 | None:intergenic | 45.0% | |
| TTGGTTTAGGTGATGAGTCC+TGG | + | chr6_2:68309737-68309756 | Msa0925320:intron | 45.0% | |
| TGCTGCAAAACCCAGCTAAA+TGG | + | chr6_2:68309767-68309786 | Msa0925320:CDS | 45.0% | |
| TGCAAAACCCAGCTAAATGG+TGG | + | chr6_2:68309770-68309789 | Msa0925320:CDS | 45.0% | |
| GCAAAACCCAGCTAAATGGT+GGG | + | chr6_2:68309771-68309790 | Msa0925320:CDS | 45.0% | |
| !! | AAGATACTGGTTTAGGGCTG+TGG | + | chr6_2:68309950-68309969 | Msa0925320:CDS | 45.0% |
| GCTCAGAGATTCACCAAGTT+GGG | + | chr6_2:68309972-68309991 | Msa0925320:CDS | 45.0% | |
| GTTGGTACAGAGATTCTCAG+TGG | + | chr6_2:68310124-68310143 | Msa0925320:intron | 45.0% | |
| ! | TGCTTGAAATCGGGTCCTTT+TGG | - | chr6_2:68310592-68310611 | None:intergenic | 45.0% |
| GCTTAGAGGTTCACCAAGTT+GGG | + | chr6_2:68310636-68310655 | Msa0925320:CDS | 45.0% | |
| AAGTCGTTTACCAAGTTCGG+TGG | + | chr6_2:68310765-68310784 | Msa0925320:three_prime_UTR | 45.0% | |
| GTAAGAAGATCCACCGAACT+TGG | - | chr6_2:68310778-68310797 | None:intergenic | 45.0% | |
| !!! | ACTATATATTATTTTTTTTT+TGG | + | chr6_2:68308463-68308482 | Msa0925320:intron | 5.0% |
| !!! | CTATATATTATTTTTTTTTT+GGG | + | chr6_2:68308464-68308483 | Msa0925320:intron | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr6_2:68308922-68308941 | Msa0925320:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr6_2:68308923-68308942 | Msa0925320:intron | 5.0% |
| !! | TATAAAAGTAAAAAAAAAAA+GGG | - | chr6_2:68309026-68309045 | None:intergenic | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr6_2:68308922-68308941 | Msa0925320:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr6_2:68308923-68308942 | Msa0925320:intron | 5.0% |
| !! | AGTAGTTGGTGGTGGTGGAT+CGG | - | chr6_2:68304051-68304070 | None:intergenic | 50.0% |
| TTTGCGAATGGTGGTTGTGG+CGG | - | chr6_2:68304080-68304099 | None:intergenic | 50.0% | |
| GGTTGGAATGGGATTTCGGT+TGG | - | chr6_2:68304127-68304146 | None:intergenic | 50.0% | |
| !! | TGGCGAGTTTGGGTTGGAAT+GGG | - | chr6_2:68304138-68304157 | None:intergenic | 50.0% |
| !! | TTGGCGAGTTTGGGTTGGAA+TGG | - | chr6_2:68304139-68304158 | None:intergenic | 50.0% |
| TTGACGGAGTTGGCGAGTTT+GGG | - | chr6_2:68304148-68304167 | None:intergenic | 50.0% | |
| GCCAACTCCGTCAACCTAAT+TGG | + | chr6_2:68304154-68304173 | Msa0925320:CDS | 50.0% | |
| CACTTCCAAACTTCCACCGA+CGG | + | chr6_2:68304196-68304215 | Msa0925320:CDS | 50.0% | |
| GACACACTGACATGTGACAC+TGG | + | chr6_2:68304747-68304766 | Msa0925320:intron | 50.0% | |
| !! | GTGTTGGTGTCATGTCGTGT+CGG | + | chr6_2:68304813-68304832 | Msa0925320:intron | 50.0% |
| TGTCATGTCGTGTCGGATAC+AGG | + | chr6_2:68304820-68304839 | Msa0925320:intron | 50.0% | |
| !! | GGTCCTTAAAAAGTGCCCTG+GGG | + | chr6_2:68306878-68306897 | Msa0925320:intron | 50.0% |
| !! | GTCCTTAAAAAGTGCCCTGG+GGG | + | chr6_2:68306879-68306898 | Msa0925320:intron | 50.0% |
| TATTCACGATCCGGATCGGT+AGG | + | chr6_2:68307425-68307444 | Msa0925320:intron | 50.0% | |
| ATTCACGATCCGGATCGGTA+GGG | + | chr6_2:68307426-68307445 | Msa0925320:intron | 50.0% | |
| GGCGGTGTATTTCTTTGCAC+TGG | - | chr6_2:68308018-68308037 | None:intergenic | 50.0% | |
| CCGCCTATTTGTCAAGTCCT+TGG | + | chr6_2:68308033-68308052 | Msa0925320:CDS | 50.0% | |
| GCCCCAAGGACTTGACAAAT+AGG | - | chr6_2:68308039-68308058 | None:intergenic | 50.0% | |
| ! | CGCTTGAAGTCAGGGTACTT+TGG | - | chr6_2:68308211-68308230 | None:intergenic | 50.0% |
| CATCCTTGCGCTTGAAGTCA+GGG | - | chr6_2:68308219-68308238 | None:intergenic | 50.0% | |
| GCTTGACAAGGCTCCAAAGT+CGG | + | chr6_2:68308255-68308274 | Msa0925320:CDS | 50.0% | |
| GGCTCAGAGATTCACCAAGT+TGG | + | chr6_2:68309971-68309990 | Msa0925320:CDS | 50.0% | |
| AAGCACAAAGACACCGGTGA+AGG | + | chr6_2:68310607-68310626 | Msa0925320:CDS | 50.0% | |
| AGCACAAAGACACCGGTGAA+GGG | + | chr6_2:68310608-68310627 | Msa0925320:CDS | 50.0% | |
| TCTAAGCCATAGCCCTTCAC+CGG | - | chr6_2:68310623-68310642 | None:intergenic | 50.0% | |
| GGCTTAGAGGTTCACCAAGT+TGG | + | chr6_2:68310635-68310654 | Msa0925320:CDS | 50.0% | |
| ! | GGCTTCAACGGTGGCAATTT+TGG | - | chr6_2:68310667-68310686 | None:intergenic | 50.0% |
| !! | TGTTGTTTCGGCTTCAACGG+TGG | - | chr6_2:68310676-68310695 | None:intergenic | 50.0% |
| GGAGGTGAAACAGAGAGAAC+TGG | - | chr6_2:68310800-68310819 | None:intergenic | 50.0% | |
| GTTGACGGAGTTGGCGAGTT+TGG | - | chr6_2:68304149-68304168 | None:intergenic | 55.0% | |
| AAGGCGAGTGATGACAGTGG+CGG | - | chr6_2:68304233-68304252 | None:intergenic | 55.0% | |
| ACCAAGGCGAGTGATGACAG+TGG | - | chr6_2:68304236-68304255 | None:intergenic | 55.0% | |
| TTGTCCCACTAAGTGGGGGT+CGG | - | chr6_2:68305260-68305279 | None:intergenic | 55.0% | |
| !! | TGCCCCCAGGGCACTTTTTA+AGG | - | chr6_2:68306884-68306903 | None:intergenic | 55.0% |
| CGCATCAGATCGAAAGGGGA+TGG | + | chr6_2:68307000-68307019 | Msa0925320:intron | 55.0% | |
| TTCACGATCCGGATCGGTAG+GGG | + | chr6_2:68307427-68307446 | Msa0925320:intron | 55.0% | |
| TTCACTCACCCCTACCGATC+CGG | - | chr6_2:68307438-68307457 | None:intergenic | 55.0% | |
| TCATCTAGAAGGTCGCCCCA+AGG | - | chr6_2:68308053-68308072 | None:intergenic | 55.0% | |
| GTACCCTGACTTCAAGCGCA+AGG | + | chr6_2:68308213-68308232 | Msa0925320:CDS | 55.0% | |
| CCATCCTTGCGCTTGAAGTC+AGG | - | chr6_2:68308220-68308239 | None:intergenic | 55.0% | |
| CCTGACTTCAAGCGCAAGGA+TGG | + | chr6_2:68308217-68308236 | Msa0925320:CDS | 55.0% | |
| ! | TGGAGCCTTGTCAAGCCAGA+TGG | - | chr6_2:68308251-68308270 | None:intergenic | 55.0% |
| AAGACACCGGTGAAGGGCTA+TGG | + | chr6_2:68310614-68310633 | Msa0925320:CDS | 55.0% | |
| GGTGAAGGGCTATGGCTTAG+AGG | + | chr6_2:68310622-68310641 | Msa0925320:CDS | 55.0% | |
| !! | TGGTGGTGGTGGATCGGAGA+CGG | - | chr6_2:68304045-68304064 | None:intergenic | 60.0% |
| !! | GGTGGAGTAGTTGGTGGTGG+TGG | - | chr6_2:68304056-68304075 | None:intergenic | 60.0% |
| CGGAGTTGGCGAGTTTGGGT+TGG | - | chr6_2:68304144-68304163 | None:intergenic | 60.0% | |
| GGTTGCCGTCGGTGGAAGTT+TGG | - | chr6_2:68304204-68304223 | None:intergenic | 60.0% | |
| TGATGACAGTGGCGGCGGAA+GGG | - | chr6_2:68304225-68304244 | None:intergenic | 60.0% | |
| GCCACTGTCATCACTCGCCT+TGG | + | chr6_2:68304232-68304251 | Msa0925320:CDS | 60.0% | |
| CTAAGTGGGGGTCGGCTACA+TGG | - | chr6_2:68305252-68305271 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCCACTTAG+TGG | + | chr6_2:68305252-68305271 | Msa0925320:intron | 60.0% | |
| GTAGCCGACCCCCACTTAGT+GGG | + | chr6_2:68305253-68305272 | Msa0925320:intron | 60.0% | |
| AATGCTAGCGAGTGCCCCCA+GGG | - | chr6_2:68306896-68306915 | None:intergenic | 60.0% | |
| AAATGCTAGCGAGTGCCCCC+AGG | - | chr6_2:68306897-68306916 | None:intergenic | 60.0% | |
| !! | TGGTGGTGGATCGGAGACGG+AGG | - | chr6_2:68304042-68304061 | None:intergenic | 65.0% |
| !! | GGCGGTGGAGTAGTTGGTGG+TGG | - | chr6_2:68304059-68304078 | None:intergenic | 65.0% |
| TGTGGCGGCGGTGGAGTAGT+TGG | - | chr6_2:68304065-68304084 | None:intergenic | 65.0% | |
| AATGGTGGTTGTGGCGGCGG+TGG | - | chr6_2:68304074-68304093 | None:intergenic | 65.0% | |
| GCGAATGGTGGTTGTGGCGG+CGG | - | chr6_2:68304077-68304096 | None:intergenic | 65.0% | |
| GTGATGACAGTGGCGGCGGA+AGG | - | chr6_2:68304226-68304245 | None:intergenic | 65.0% | |
| GCGAGTGATGACAGTGGCGG+CGG | - | chr6_2:68304230-68304249 | None:intergenic | 65.0% | |
| GGCGGCGGTGGAGTAGTTGG+TGG | - | chr6_2:68304062-68304081 | None:intergenic | 70.0% | |
| GGCGGAAGGGTTGCCGTCGG+TGG | - | chr6_2:68304212-68304231 | None:intergenic | 75.0% | |
| GGCGGCGGAAGGGTTGCCGT+CGG | - | chr6_2:68304215-68304234 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 68303929 | 68311036 | 68303929 | ID=Msa0925320;Name=Msa0925320 |
| chr6_2 | mRNA | 68303929 | 68311036 | 68303929 | ID=Msa0925320-mRNA-1;Parent=Msa0925320;Name=Msa0925320-mRNA-1;_AED=0.16;_eAED=0.16;_QI=12|1|1|1|1|1|10|304|474 |
| chr6_2 | exon | 68303929 | 68304420 | 68303929 | ID=Msa0925320-mRNA-1:exon:10880;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68304945 | 68305035 | 68304945 | ID=Msa0925320-mRNA-1:exon:10881;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68307620 | 68307753 | 68307620 | ID=Msa0925320-mRNA-1:exon:10882;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68307873 | 68307912 | 68307873 | ID=Msa0925320-mRNA-1:exon:10883;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68308015 | 68308118 | 68308015 | ID=Msa0925320-mRNA-1:exon:10884;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68308202 | 68308349 | 68308202 | ID=Msa0925320-mRNA-1:exon:10885;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68309746 | 68309810 | 68309746 | ID=Msa0925320-mRNA-1:exon:10886;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68309919 | 68310066 | 68309919 | ID=Msa0925320-mRNA-1:exon:10887;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68310413 | 68310477 | 68310413 | ID=Msa0925320-mRNA-1:exon:10888;Parent=Msa0925320-mRNA-1 |
| chr6_2 | exon | 68310583 | 68311036 | 68310583 | ID=Msa0925320-mRNA-1:exon:10889;Parent=Msa0925320-mRNA-1 |
| chr6_2 | five_prime_UTR | 68303929 | 68303940 | 68303929 | ID=Msa0925320-mRNA-1:five_prime_utr;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68303941 | 68304420 | 68303941 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68304945 | 68305035 | 68304945 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68307620 | 68307753 | 68307620 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68307873 | 68307912 | 68307873 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68308015 | 68308118 | 68308015 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68308202 | 68308349 | 68308202 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68309746 | 68309810 | 68309746 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68309919 | 68310066 | 68309919 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68310413 | 68310477 | 68310413 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | CDS | 68310583 | 68310732 | 68310583 | ID=Msa0925320-mRNA-1:cds;Parent=Msa0925320-mRNA-1 |
| chr6_2 | three_prime_UTR | 68310733 | 68311036 | 68310733 | ID=Msa0925320-mRNA-1:three_prime_utr;Parent=Msa0925320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
