Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916350 | KEH40194.1 | 66.667 | 153 | 18 | 3 | 1 | 122 | 1 | 151 | 1.41e-45 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916350 | sp|Q8GY84|RH10_ARATH | 44.079 | 152 | 50 | 3 | 1 | 119 | 258 | 407 | 3.19e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004100 | Msa0916350 | 0.830448 | 2.920430e-55 | -8.615850e-47 |
| Msa0916350 | Msa0993860 | 0.862980 | 3.450935e-64 | -8.615850e-47 |
| Msa0916350 | Msa0993870 | 0.916459 | 1.736766e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916350 | MtrunA17_Chr1g0155691 | 66.667 | 153 | 18 | 3 | 1 | 122 | 1 | 151 | 1.30e-49 | 157 |
| Msa0916350 | MtrunA17_Chr5g0429221 | 52.318 | 151 | 40 | 4 | 1 | 121 | 244 | 392 | 1.10e-37 | 131 |
| Msa0916350 | MtrunA17_Chr7g0236841 | 49.342 | 152 | 42 | 3 | 1 | 119 | 248 | 397 | 2.98e-29 | 109 |
| Msa0916350 | MtrunA17_Chr6g0483491 | 49.342 | 152 | 42 | 3 | 1 | 119 | 248 | 397 | 3.47e-29 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916350 | AT5G60990.1 | 44.079 | 152 | 50 | 3 | 1 | 119 | 258 | 407 | 3.24e-29 | 110 |
Find 31 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTAAGAATCTTGGTTTC+AGG | 0.181986 | 6_2:-35984711 | Msa0916350:CDS |
| TGACTCATATAACTAATAAT+AGG | 0.255686 | 6_2:+35984682 | None:intergenic |
| TCCTTGAATGCGTTCAAGTC+TGG | 0.307276 | 6_2:-35984549 | Msa0916350:CDS |
| GCTTTGATTCTTAAGAATCT+TGG | 0.333972 | 6_2:-35984718 | Msa0916350:CDS |
| ATGTGGTACAATGCTTCTTT+TGG | 0.341877 | 6_2:-35984740 | Msa0916350:CDS |
| CTCATGACCGTGTGATCAAC+AGG | 0.384376 | 6_2:-35979932 | Msa0916350:CDS |
| TTGTAGTGACTTTGTTAGTA+AGG | 0.398889 | 6_2:-35984508 | Msa0916350:CDS |
| CCCAGACTTGAACGCATTCA+AGG | 0.403087 | 6_2:+35984548 | None:intergenic |
| ATAAAATTCTAATTGTCAAT+GGG | 0.407296 | 6_2:+35979243 | None:intergenic |
| TTTGGAAGGGTGTGCTATTG+AGG | 0.416430 | 6_2:-35979666 | Msa0916350:CDS |
| GACTCATATAACTAATAATA+GGG | 0.421629 | 6_2:+35984683 | None:intergenic |
| TCTTAAGAATCTTGGTTTCA+GGG | 0.434508 | 6_2:-35984710 | Msa0916350:CDS |
| TATTATTAGTTATATGAGTC+AGG | 0.445349 | 6_2:-35984680 | Msa0916350:intron |
| AAAAGCAAAACTTCCTCAAA+TGG | 0.452304 | 6_2:+35979686 | None:intergenic |
| CCTTGAATGCGTTCAAGTCT+GGG | 0.463606 | 6_2:-35984548 | Msa0916350:CDS |
| ATTGTATCCTGCACCATTTG+AGG | 0.486127 | 6_2:-35979699 | Msa0916350:CDS |
| TACACTCTCACTAAAATGAC+TGG | 0.518270 | 6_2:-35984790 | None:intergenic |
| TGTAGTGACTTTGTTAGTAA+GGG | 0.522265 | 6_2:-35984507 | Msa0916350:CDS |
| AAAACTTCCTCAAATGGTGC+AGG | 0.550172 | 6_2:+35979692 | None:intergenic |
| AATGACTGGAAGTACATCAA+TGG | 0.550477 | 6_2:-35984776 | Msa0916350:CDS |
| ATTACATCTACCGCGTGGGA+TGG | 0.562797 | 6_2:-35979909 | Msa0916350:CDS |
| TCAAATGGTGCAGGATACAA+TGG | 0.597106 | 6_2:+35979701 | None:intergenic |
| CATATAACTAATAATAGGGA+TGG | 0.602559 | 6_2:+35984687 | None:intergenic |
| GGCTGAAAGATTATCACAAG+AGG | 0.628418 | 6_2:-35979645 | Msa0916350:intron |
| CTTGAATGCGTTCAAGTCTG+GGG | 0.643789 | 6_2:-35984547 | Msa0916350:CDS |
| CAGGATTACATCTACCGCGT+GGG | 0.645040 | 6_2:-35979913 | Msa0916350:CDS |
| ATGTAATCCTGTTGATCACA+CGG | 0.645624 | 6_2:+35979925 | None:intergenic |
| ACAGGATTACATCTACCGCG+TGG | 0.703821 | 6_2:-35979914 | Msa0916350:CDS |
| ATGGTATACACTCAGCAATG+TGG | 0.716399 | 6_2:-35984757 | Msa0916350:CDS |
| TAAGGGACTAGATATTCCAG+CGG | 0.751272 | 6_2:-35984490 | Msa0916350:intron |
| GATCAACAGTCCATCCCACG+CGG | 0.778664 | 6_2:+35979899 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTTTTAAATAAAA+TGG | + | chr6_2:35979899-35979918 | None:intergenic | 0.0% |
| !!! | TTAACATAATAACTTTTTAT+AGG | - | chr6_2:35979447-35979466 | Msa0916350:intron | 10.0% |
| !! | AGCAAAAAAATATATATATA+AGG | - | chr6_2:35981963-35981982 | Msa0916350:intron | 10.0% |
| !! | GCAAAAAAATATATATATAA+GGG | - | chr6_2:35981964-35981983 | Msa0916350:intron | 10.0% |
| !! | TTTCTTAGATTAAATTATAA+TGG | + | chr6_2:35981993-35982012 | None:intergenic | 10.0% |
| !!! | TATTCTAAATTAATTTTGTA+TGG | + | chr6_2:35982235-35982254 | None:intergenic | 10.0% |
| !!! | GAATTTATATAGTTTAAAAT+TGG | + | chr6_2:35982391-35982410 | None:intergenic | 10.0% |
| !! | ATTGTTATAAATAAAACTAT+AGG | + | chr6_2:35982968-35982987 | None:intergenic | 10.0% |
| !!! | TATAAAATACTAATTTCTTT+TGG | + | chr6_2:35984685-35984704 | None:intergenic | 10.0% |
| !! | AGAAATTACAATTATAATAC+AGG | + | chr6_2:35979395-35979414 | None:intergenic | 15.0% |
| !! | AAGTTATTATGTTAAGAATT+AGG | + | chr6_2:35979442-35979461 | None:intergenic | 15.0% |
| !! | AAAAAATATATATATAAGGG+TGG | - | chr6_2:35981967-35981986 | Msa0916350:intron | 15.0% |
| !! | TTAACAAGCTTATAAAAAAA+CGG | + | chr6_2:35983119-35983138 | None:intergenic | 15.0% |
| !!! | AAGAACTAACTATATTTTTT+TGG | - | chr6_2:35983155-35983174 | Msa0916350:intron | 15.0% |
| !!! | ATATGACAGTTTTTTTTTTT+AGG | - | chr6_2:35984761-35984780 | Msa0916350:CDS | 15.0% |
| !!! | TATGACAGTTTTTTTTTTTA+GGG | - | chr6_2:35984762-35984781 | Msa0916350:CDS | 15.0% |
| !! | GACTCATATAACTAATAATA+GGG | + | chr6_2:35979353-35979372 | None:intergenic | 20.0% |
| !! | TGACTCATATAACTAATAAT+AGG | + | chr6_2:35979354-35979373 | None:intergenic | 20.0% |
| !! | TATTATTAGTTATATGAGTC+AGG | - | chr6_2:35979353-35979372 | Msa0916350:intron | 20.0% |
| !!! | AAATAAAATGGATTTCACAT+CGG | + | chr6_2:35979887-35979906 | None:intergenic | 20.0% |
| !! | AATATCTTGTAATCGTAATT+TGG | + | chr6_2:35980446-35980465 | None:intergenic | 20.0% |
| !!! | TGGCTTGTAAAAATTATTTT+CGG | + | chr6_2:35980574-35980593 | None:intergenic | 20.0% |
| !! | AATTAAATTAATGTGTGTAG+CGG | - | chr6_2:35981005-35981024 | Msa0916350:intron | 20.0% |
| !! | ACTGTTAATGTAAAAAACTT+TGG | + | chr6_2:35981040-35981059 | None:intergenic | 20.0% |
| !! | TTAAAATATAGCAATCATGA+TGG | - | chr6_2:35981178-35981197 | Msa0916350:intron | 20.0% |
| !!! | TAAAAGTTTTTGAGCAATTT+GGG | + | chr6_2:35981315-35981334 | None:intergenic | 20.0% |
| !!! | TTAAAAGTTTTTGAGCAATT+TGG | + | chr6_2:35981316-35981335 | None:intergenic | 20.0% |
| !! | AAGAATGAAAAACCATATTA+TGG | - | chr6_2:35981478-35981497 | Msa0916350:intron | 20.0% |
| !! | AGAATGAAAAACCATATTAT+GGG | - | chr6_2:35981479-35981498 | Msa0916350:intron | 20.0% |
| !! | ATAAAAAAAAAGAACATGTG+TGG | - | chr6_2:35981645-35981664 | Msa0916350:intron | 20.0% |
| !! | ACAAAAGATAAAATTCAAAG+TGG | - | chr6_2:35981720-35981739 | Msa0916350:intron | 20.0% |
| !! | CAAAAGATAAAATTCAAAGT+GGG | - | chr6_2:35981721-35981740 | Msa0916350:intron | 20.0% |
| !! | TATGAATATTTAACATCTCT+TGG | - | chr6_2:35982698-35982717 | Msa0916350:intron | 20.0% |
| !! | AATATATATTATAGGTTGCA+AGG | + | chr6_2:35982938-35982957 | None:intergenic | 20.0% |
| !! | GTAAATGTATATATTATTGC+AGG | - | chr6_2:35983179-35983198 | Msa0916350:intron | 20.0% |
| !! | CAAGAATATTGAAATGTTAT+CGG | + | chr6_2:35983521-35983540 | None:intergenic | 20.0% |
| !! | TCTCAATCTCATTATAATAA+GGG | + | chr6_2:35983551-35983570 | None:intergenic | 20.0% |
| !!! | ATTTTCAATTTCGTTTAACA+AGG | + | chr6_2:35983668-35983687 | None:intergenic | 20.0% |
| !! | TTGAAAATAAACTCAGTTTA+AGG | - | chr6_2:35983680-35983699 | Msa0916350:intron | 20.0% |
| !! | AATATGATAGAGAAACATAT+AGG | - | chr6_2:35984207-35984226 | Msa0916350:intron | 20.0% |
| !!! | AAATAGAGAAGTTAAGTTTT+TGG | - | chr6_2:35984475-35984494 | Msa0916350:intron | 20.0% |
| !! | TCCTTTCTATATCTAATTAT+CGG | + | chr6_2:35984560-35984579 | None:intergenic | 20.0% |
| ! | CATATAACTAATAATAGGGA+TGG | + | chr6_2:35979349-35979368 | None:intergenic | 25.0% |
| !! | TTTTTATAGGCAAAGAAACT+TGG | - | chr6_2:35979460-35979479 | Msa0916350:intron | 25.0% |
| !! | AATAAAATGGATTTCACATC+GGG | + | chr6_2:35979886-35979905 | None:intergenic | 25.0% |
| ! | ATTTGTGATATGAACTCATT+AGG | + | chr6_2:35980071-35980090 | None:intergenic | 25.0% |
| ! | AGATTAAAGAATGTCAAAAG+AGG | + | chr6_2:35980220-35980239 | None:intergenic | 25.0% |
| ! | TAAGATTGTTGTCTTTGAAT+TGG | + | chr6_2:35980535-35980554 | None:intergenic | 25.0% |
| !!! | GTAGAGTATTTTTTGTTTTG+TGG | + | chr6_2:35980594-35980613 | None:intergenic | 25.0% |
| ! | ATGGTAGTATAATTGTGATT+TGG | + | chr6_2:35980641-35980660 | None:intergenic | 25.0% |
| ! | AAAATGTAGAAATGGCAATT+TGG | + | chr6_2:35981229-35981248 | None:intergenic | 25.0% |
| !!! | AAAAGTTTTTGAGCAATTTG+GGG | + | chr6_2:35981314-35981333 | None:intergenic | 25.0% |
| ! | CTTATGCTTCATTTATTGTA+TGG | + | chr6_2:35981530-35981549 | None:intergenic | 25.0% |
| !! | CTATAAGGTTTAATTTATCC+TGG | + | chr6_2:35981910-35981929 | None:intergenic | 25.0% |
| ! | TATGAAAATGACTACCATAA+AGG | - | chr6_2:35982022-35982041 | Msa0916350:intron | 25.0% |
| ! | TAGTTTAGTGTATATGTCTT+AGG | + | chr6_2:35982360-35982379 | None:intergenic | 25.0% |
| ! | ATAGAAAAAAGCTTAAGACA+GGG | - | chr6_2:35982468-35982487 | Msa0916350:intron | 25.0% |
| !! | TTTTGTGTCTAATGATCTTT+GGG | + | chr6_2:35982563-35982582 | None:intergenic | 25.0% |
| !! | ATTTTGTGTCTAATGATCTT+TGG | + | chr6_2:35982564-35982583 | None:intergenic | 25.0% |
| ! | ATGGAAATGTAAATGTTGAA+GGG | + | chr6_2:35982741-35982760 | None:intergenic | 25.0% |
| ! | TATGGAAATGTAAATGTTGA+AGG | + | chr6_2:35982742-35982761 | None:intergenic | 25.0% |
| !!! | AGTTAAGATAATGGAGTATA+TGG | + | chr6_2:35982788-35982807 | None:intergenic | 25.0% |
| ! | CTGTTTAAATTTACTTACAG+AGG | + | chr6_2:35983075-35983094 | None:intergenic | 25.0% |
| ! | GAAAAATGAAGACAAAAAAG+AGG | + | chr6_2:35983248-35983267 | None:intergenic | 25.0% |
| ! | TAGTTAATAGTTTGGATCTA+TGG | + | chr6_2:35983451-35983470 | None:intergenic | 25.0% |
| !! | ATTTTTGTTCTTTTCCTTGT+GGG | + | chr6_2:35983492-35983511 | None:intergenic | 25.0% |
| !!! | TATTTTTGTTCTTTTCCTTG+TGG | + | chr6_2:35983493-35983512 | None:intergenic | 25.0% |
| ! | CTCAATCTCATTATAATAAG+GGG | + | chr6_2:35983550-35983569 | None:intergenic | 25.0% |
| ! | CTCTCAATCTCATTATAATA+AGG | + | chr6_2:35983552-35983571 | None:intergenic | 25.0% |
| ! | TGATTTGAAGAAAGAGAAAA+GGG | - | chr6_2:35983812-35983831 | Msa0916350:intron | 25.0% |
| ! | ATTAAAGTGAATTCTCCAAA+GGG | + | chr6_2:35983950-35983969 | None:intergenic | 25.0% |
| ! | AATTAAAGTGAATTCTCCAA+AGG | + | chr6_2:35983951-35983970 | None:intergenic | 25.0% |
| !! | AAAGCGTCATAGTAAATAAT+TGG | - | chr6_2:35984265-35984284 | Msa0916350:intron | 25.0% |
| ! | TCTATTTAAAAGAAGTAGAC+AGG | + | chr6_2:35984462-35984481 | None:intergenic | 25.0% |
| !!! | AGTTAAGTTTTTGGATTTTG+TGG | - | chr6_2:35984484-35984503 | Msa0916350:intron | 25.0% |
| ! | TTATACCAATGAAGACAAAT+TGG | + | chr6_2:35984528-35984547 | None:intergenic | 25.0% |
| ! | TCCGATAATTAGATATAGAA+AGG | - | chr6_2:35984556-35984575 | Msa0916350:CDS | 25.0% |
| GCTTTGATTCTTAAGAATCT+TGG | - | chr6_2:35979315-35979334 | Msa0916350:intron | 30.0% | |
| TTCTTAAGAATCTTGGTTTC+AGG | - | chr6_2:35979322-35979341 | Msa0916350:intron | 30.0% | |
| TCTTAAGAATCTTGGTTTCA+GGG | - | chr6_2:35979323-35979342 | Msa0916350:intron | 30.0% | |
| GAATTAGGCATATTTCTTGT+TGG | + | chr6_2:35979427-35979446 | None:intergenic | 30.0% | |
| TTGTAGTGACTTTGTTAGTA+AGG | - | chr6_2:35979525-35979544 | Msa0916350:intron | 30.0% | |
| TGTAGTGACTTTGTTAGTAA+GGG | - | chr6_2:35979526-35979545 | Msa0916350:intron | 30.0% | |
| TGATTAACTACAACATTCCT+TGG | - | chr6_2:35979575-35979594 | Msa0916350:intron | 30.0% | |
| ATGTACGTGACATTTAACAT+CGG | - | chr6_2:35979706-35979725 | Msa0916350:CDS | 30.0% | |
| ! | TGGAAAACAACTTTTCACAT+CGG | + | chr6_2:35979740-35979759 | None:intergenic | 30.0% |
| CTTCAGATTTGGAAAAAAAG+CGG | + | chr6_2:35979792-35979811 | None:intergenic | 30.0% | |
| GTGAAATACATCTTCAGATT+TGG | + | chr6_2:35979803-35979822 | None:intergenic | 30.0% | |
| TCTGAAGATGTATTTCACAA+CGG | - | chr6_2:35979805-35979824 | Msa0916350:intron | 30.0% | |
| AATATGTAGATTTCACTTCG+GGG | + | chr6_2:35979843-35979862 | None:intergenic | 30.0% | |
| GAATATGTAGATTTCACTTC+GGG | + | chr6_2:35979844-35979863 | None:intergenic | 30.0% | |
| GGAATATGTAGATTTCACTT+CGG | + | chr6_2:35979845-35979864 | None:intergenic | 30.0% | |
| TTATATGAATTTGTCGCATC+AGG | + | chr6_2:35979946-35979965 | None:intergenic | 30.0% | |
| GCTTATTCTTATGTAGAGAT+TGG | + | chr6_2:35980143-35980162 | None:intergenic | 30.0% | |
| TAATTAACACTGTTAACACG+AGG | - | chr6_2:35980242-35980261 | Msa0916350:intron | 30.0% | |
| !!! | GTTTTATTTCAGACGATAGT+TGG | + | chr6_2:35980360-35980379 | None:intergenic | 30.0% |
| ! | ACTATCGTCTGAAATAAAAC+AGG | - | chr6_2:35980360-35980379 | Msa0916350:intron | 30.0% |
| AATCGTAATTTGGAGAGATA+TGG | + | chr6_2:35980436-35980455 | None:intergenic | 30.0% | |
| ACAAGATATTGCACATATAC+TGG | - | chr6_2:35980456-35980475 | Msa0916350:intron | 30.0% | |
| !!! | TTAATCTGAATTGGCTTTTG+CGG | + | chr6_2:35980502-35980521 | None:intergenic | 30.0% |
| AAAAATACTCTACTCACTCA+TGG | - | chr6_2:35980601-35980620 | Msa0916350:intron | 30.0% | |
| ! | GATATCTGAGATTATGAACT+AGG | + | chr6_2:35980675-35980694 | None:intergenic | 30.0% |
| !! | TTCAATTCTAAGATTGGAAC+TGG | + | chr6_2:35980748-35980767 | None:intergenic | 30.0% |
| ! | TTTTAGTGTTGTGTTTGAAG+CGG | + | chr6_2:35980774-35980793 | None:intergenic | 30.0% |
| GATCATGGAAAATGTAGAAA+TGG | + | chr6_2:35981237-35981256 | None:intergenic | 30.0% | |
| AGATATGCAGAAAATGATCA+TGG | + | chr6_2:35981252-35981271 | None:intergenic | 30.0% | |
| !!! | GAAGCATTTTTTATCCTTGA+TGG | + | chr6_2:35981402-35981421 | None:intergenic | 30.0% |
| ! | ATCTAGAATTGAAAGAACGT+GGG | - | chr6_2:35981449-35981468 | Msa0916350:intron | 30.0% |
| AAACCATATTATGGGACTAT+AGG | - | chr6_2:35981487-35981506 | Msa0916350:intron | 30.0% | |
| CAATAAATGAAGCATAAGAG+TGG | - | chr6_2:35981532-35981551 | Msa0916350:intron | 30.0% | |
| GTTATTGTAAGCTATACCTT+TGG | + | chr6_2:35981841-35981860 | None:intergenic | 30.0% | |
| !! | GTAGTCATTTTCATAACGTT+TGG | + | chr6_2:35982017-35982036 | None:intergenic | 30.0% |
| TATTGTTACAAGTGCCTTTA+TGG | + | chr6_2:35982039-35982058 | None:intergenic | 30.0% | |
| TGTATGGTAGTTCACAATAT+TGG | + | chr6_2:35982219-35982238 | None:intergenic | 30.0% | |
| TCATTCATAAGTCATTTGAC+AGG | - | chr6_2:35982269-35982288 | Msa0916350:intron | 30.0% | |
| CATAGAAAAAAGCTTAAGAC+AGG | - | chr6_2:35982467-35982486 | Msa0916350:intron | 30.0% | |
| TTCTCATCAGTAAACATTTG+TGG | - | chr6_2:35982661-35982680 | Msa0916350:intron | 30.0% | |
| ATTTCCATAACCAAAACCAA+AGG | - | chr6_2:35982753-35982772 | Msa0916350:intron | 30.0% | |
| TTTCCATAACCAAAACCAAA+GGG | - | chr6_2:35982754-35982773 | Msa0916350:intron | 30.0% | |
| GATAGTAATAACAATGAAGG+AGG | + | chr6_2:35982814-35982833 | None:intergenic | 30.0% | |
| GGAGATAGTAATAACAATGA+AGG | + | chr6_2:35982817-35982836 | None:intergenic | 30.0% | |
| GGTAAGAAAAAGAATAAGGA+GGG | + | chr6_2:35982841-35982860 | None:intergenic | 30.0% | |
| AGGTAAGAAAAAGAATAAGG+AGG | + | chr6_2:35982842-35982861 | None:intergenic | 30.0% | |
| AGTTCAATCTAAGAAAGACA+AGG | + | chr6_2:35982908-35982927 | None:intergenic | 30.0% | |
| GATGTCGATAGTTAATAGTT+TGG | + | chr6_2:35983459-35983478 | None:intergenic | 30.0% | |
| CTAGAAGGCTTAATCTAATT+TGG | + | chr6_2:35983593-35983612 | None:intergenic | 30.0% | |
| ACTCAGTTTAAGGATATTTG+TGG | - | chr6_2:35983690-35983709 | Msa0916350:intron | 30.0% | |
| !!! | AATTTAGGGTTTTGGTTAAG+AGG | - | chr6_2:35983745-35983764 | Msa0916350:intron | 30.0% |
| !!! | ATTTAGGGTTTTGGTTAAGA+GGG | - | chr6_2:35983746-35983765 | Msa0916350:intron | 30.0% |
| GTGATTTGAAGAAAGAGAAA+AGG | - | chr6_2:35983811-35983830 | Msa0916350:intron | 30.0% | |
| CAGAAGATATAATACCTGAT+GGG | + | chr6_2:35983868-35983887 | None:intergenic | 30.0% | |
| TCAGAAGATATAATACCTGA+TGG | + | chr6_2:35983869-35983888 | None:intergenic | 30.0% | |
| ! | TGATAATTATTTTCCCCTTC+AGG | - | chr6_2:35983902-35983921 | Msa0916350:intron | 30.0% |
| TCAGTTAAGAAATACCTGAA+GGG | + | chr6_2:35983919-35983938 | None:intergenic | 30.0% | |
| ATCAGTTAAGAAATACCTGA+AGG | + | chr6_2:35983920-35983939 | None:intergenic | 30.0% | |
| TTCAGGTATTTCTTAACTGA+TGG | - | chr6_2:35983919-35983938 | Msa0916350:intron | 30.0% | |
| TCAGGTATTTCTTAACTGAT+GGG | - | chr6_2:35983920-35983939 | Msa0916350:intron | 30.0% | |
| GATAGAGAAACATATAGGTT+AGG | - | chr6_2:35984212-35984231 | Msa0916350:intron | 30.0% | |
| AAAAGCAAAACTTCCTCAAA+TGG | + | chr6_2:35984350-35984369 | None:intergenic | 30.0% | |
| ! | ATTTGAGGAAGTTTTGCTTT+TGG | - | chr6_2:35984349-35984368 | Msa0916350:intron | 30.0% |
| ATTGAGCATAGTTATGCTTT+AGG | - | chr6_2:35984422-35984441 | Msa0916350:intron | 30.0% | |
| ! | ATGTGGTACAATGCTTCTTT+TGG | - | chr6_2:35979293-35979312 | Msa0916350:intron | 35.0% |
| GAAATGACATTTCACATCAG+TGG | - | chr6_2:35979631-35979650 | Msa0916350:intron | 35.0% | |
| TGGAAATCGACATTTCACAT+CGG | - | chr6_2:35979651-35979670 | Msa0916350:CDS | 35.0% | |
| AACCTCACCTTTAGTTACAT+CGG | + | chr6_2:35979684-35979703 | None:intergenic | 35.0% | |
| TGTACGTGACATTTAACATC+GGG | - | chr6_2:35979707-35979726 | Msa0916350:CDS | 35.0% | |
| AGTTGAATCAGAAACTGATG+TGG | + | chr6_2:35979760-35979779 | None:intergenic | 35.0% | |
| GGGTTCAATTAAAGATGATG+TGG | + | chr6_2:35979866-35979885 | None:intergenic | 35.0% | |
| ! | ACTGATTTCCATTAACATGC+TGG | - | chr6_2:35980171-35980190 | Msa0916350:intron | 35.0% |
| CTGATTTCCATTAACATGCT+GGG | - | chr6_2:35980172-35980191 | Msa0916350:intron | 35.0% | |
| GAGGAAAAATAGTTCCTCTT+TGG | + | chr6_2:35980201-35980220 | None:intergenic | 35.0% | |
| !! | GGCTCAGTTTTAATCTGAAT+TGG | + | chr6_2:35980511-35980530 | None:intergenic | 35.0% |
| GATTGTTGTCTTTGAATTGG+AGG | + | chr6_2:35980532-35980551 | None:intergenic | 35.0% | |
| GAACTAGGAAATAAGAGCAA+TGG | + | chr6_2:35980660-35980679 | None:intergenic | 35.0% | |
| !! | CGGAAGTTCAATTCTAAGAT+TGG | + | chr6_2:35980754-35980773 | None:intergenic | 35.0% |
| ! | TGCAGTGATTTGAAGTGTAT+TGG | + | chr6_2:35980797-35980816 | None:intergenic | 35.0% |
| ATGTAGAAATGGCAATTTGG+AGG | + | chr6_2:35981226-35981245 | None:intergenic | 35.0% | |
| TCACTTCTACACATTTGATG+TGG | + | chr6_2:35981276-35981295 | None:intergenic | 35.0% | |
| ! | CCTTGATGGTATTGTGAATT+TGG | + | chr6_2:35981388-35981407 | None:intergenic | 35.0% |
| CCAAATTCACAATACCATCA+AGG | - | chr6_2:35981385-35981404 | Msa0916350:intron | 35.0% | |
| ! | GATCTAGAATTGAAAGAACG+TGG | - | chr6_2:35981448-35981467 | Msa0916350:intron | 35.0% |
| CTTCCTATAGTCCCATAATA+TGG | + | chr6_2:35981493-35981512 | None:intergenic | 35.0% | |
| TTATTCCTTGTATGTCTCTG+TGG | + | chr6_2:35981579-35981598 | None:intergenic | 35.0% | |
| TACAAGGAATAACTGTAACG+TGG | - | chr6_2:35981587-35981606 | Msa0916350:intron | 35.0% | |
| AAAAAGAACATGTGTGGTGT+TGG | - | chr6_2:35981651-35981670 | Msa0916350:intron | 35.0% | |
| AAAAGAACATGTGTGGTGTT+GGG | - | chr6_2:35981652-35981671 | Msa0916350:intron | 35.0% | |
| AATATAGCAAAGCTGCTACA+TGG | - | chr6_2:35981675-35981694 | Msa0916350:intron | 35.0% | |
| !! | TCTTTTGTTTGTTCCTTGCT+TGG | + | chr6_2:35981708-35981727 | None:intergenic | 35.0% |
| !! | GGACTTTGGTAGTATGATTT+TGG | + | chr6_2:35981820-35981839 | None:intergenic | 35.0% |
| ATCATACTACCAAAGTCCAA+AGG | - | chr6_2:35981822-35981841 | Msa0916350:intron | 35.0% | |
| TAAGCTATACCTTTGGACTT+TGG | + | chr6_2:35981834-35981853 | None:intergenic | 35.0% | |
| ATGTTAGTACTATGTTTGCC+TGG | + | chr6_2:35981943-35981962 | None:intergenic | 35.0% | |
| ! | ATAGGTTAGAGGTATGATTC+TGG | + | chr6_2:35982154-35982173 | None:intergenic | 35.0% |
| TGGTAGTTCACAATATTGGT+AGG | + | chr6_2:35982215-35982234 | None:intergenic | 35.0% | |
| AGGTAGTTGTTGAACTAATG+TGG | + | chr6_2:35982340-35982359 | None:intergenic | 35.0% | |
| ! | TCATTTTCCCCTGTTTTCTA+CGG | + | chr6_2:35982441-35982460 | None:intergenic | 35.0% |
| ! | TGGGATTGAACTGATGTTTT+AGG | + | chr6_2:35982544-35982563 | None:intergenic | 35.0% |
| TCATCAGTAAACATTTGTGG+TGG | - | chr6_2:35982664-35982683 | Msa0916350:intron | 35.0% | |
| TATATGGTTCAACAACCCTT+TGG | + | chr6_2:35982772-35982791 | None:intergenic | 35.0% | |
| AGGAGGAGAAGTTAAGATAA+TGG | + | chr6_2:35982797-35982816 | None:intergenic | 35.0% | |
| AAGAAAAAGAATAAGGAGGG+TGG | + | chr6_2:35982838-35982857 | None:intergenic | 35.0% | |
| GGGAGGTAAGAAAAAGAATA+AGG | + | chr6_2:35982845-35982864 | None:intergenic | 35.0% | |
| CAATCTAAGAAAGACAAGGA+AGG | + | chr6_2:35982904-35982923 | None:intergenic | 35.0% | |
| TATTATAGGTTGCAAGGTTG+AGG | + | chr6_2:35982932-35982951 | None:intergenic | 35.0% | |
| !! | ATGTTCTTCTCTTGATTTGC+AGG | - | chr6_2:35983018-35983037 | Msa0916350:intron | 35.0% |
| ! | AGATGTTTTCTTCTCTGCAA+TGG | + | chr6_2:35983423-35983442 | None:intergenic | 35.0% |
| CTAATTTGGTCTCAAATCTC+TGG | + | chr6_2:35983579-35983598 | None:intergenic | 35.0% | |
| AGATTAAGCCTTCTAGATCT+AGG | - | chr6_2:35983597-35983616 | Msa0916350:intron | 35.0% | |
| GATTAAGCCTTCTAGATCTA+GGG | - | chr6_2:35983598-35983617 | Msa0916350:intron | 35.0% | |
| CAGTTTAAGGATATTTGTGG+TGG | - | chr6_2:35983693-35983712 | Msa0916350:intron | 35.0% | |
| TTTAAGGATATTTGTGGTGG+TGG | - | chr6_2:35983696-35983715 | Msa0916350:intron | 35.0% | |
| ! | TGATTAAAGGAATTTGGTGG+TGG | - | chr6_2:35983720-35983739 | Msa0916350:intron | 35.0% |
| !! | AATTTGGTGGTGGAGAATTT+AGG | - | chr6_2:35983730-35983749 | Msa0916350:intron | 35.0% |
| !! | ATTTGGTGGTGGAGAATTTA+GGG | - | chr6_2:35983731-35983750 | Msa0916350:intron | 35.0% |
| CAGTTAAGAAATACCTGAAG+GGG | + | chr6_2:35983918-35983937 | None:intergenic | 35.0% | |
| ! | TGCTTTTGCCATCAAGTAAT+TGG | - | chr6_2:35983989-35984008 | Msa0916350:intron | 35.0% |
| ATGTAATCCTGTTGATCACA+CGG | + | chr6_2:35984111-35984130 | None:intergenic | 35.0% | |
| TGAAATGTCTCCTTTCATCT+GGG | + | chr6_2:35984188-35984207 | None:intergenic | 35.0% | |
| TTGAAATGTCTCCTTTCATC+TGG | + | chr6_2:35984189-35984208 | None:intergenic | 35.0% | |
| !! | AGGAAGTTTTGCTTTTGGAA+GGG | - | chr6_2:35984354-35984373 | Msa0916350:intron | 35.0% |
| ! | TTTGTGGCAAGTTGAAATTG+TGG | - | chr6_2:35984500-35984519 | Msa0916350:CDS | 35.0% |
| GAATGTAAGATAAGACTGCA+CGG | - | chr6_2:35984578-35984597 | Msa0916350:intron | 35.0% | |
| AATGTAAGATAAGACTGCAC+GGG | - | chr6_2:35984579-35984598 | Msa0916350:intron | 35.0% | |
| !! | TTTTGGAAATGCACTTGAGA+GGG | + | chr6_2:35984668-35984687 | None:intergenic | 35.0% |
| ATGGTATACACTCAGCAATG+TGG | - | chr6_2:35979276-35979295 | Msa0916350:intron | 40.0% | |
| TAAGGGACTAGATATTCCAG+CGG | - | chr6_2:35979543-35979562 | Msa0916350:intron | 40.0% | |
| AGATATTCCAGCGGTAGATA+TGG | - | chr6_2:35979552-35979571 | Msa0916350:intron | 40.0% | |
| TTAATCACCATATCTACCGC+TGG | + | chr6_2:35979562-35979581 | None:intergenic | 40.0% | |
| CATCTTACGTTTGGATACCA+AGG | + | chr6_2:35979595-35979614 | None:intergenic | 40.0% | |
| GTGATAGCTCATCTTACGTT+TGG | + | chr6_2:35979604-35979623 | None:intergenic | 40.0% | |
| GGAAATCGACATTTCACATC+GGG | - | chr6_2:35979652-35979671 | Msa0916350:CDS | 40.0% | |
| ! | CACCTTTAGTTACATCGGTT+GGG | + | chr6_2:35979679-35979698 | None:intergenic | 40.0% |
| TCACCTTTAGTTACATCGGT+TGG | + | chr6_2:35979680-35979699 | None:intergenic | 40.0% | |
| AACCGATGTAACTAAAGGTG+AGG | - | chr6_2:35979679-35979698 | Msa0916350:CDS | 40.0% | |
| GTGACATTTAACATCGGGTA+AGG | - | chr6_2:35979712-35979731 | Msa0916350:CDS | 40.0% | |
| TTGGTTTCCCAGCATGTTAA+TGG | + | chr6_2:35980182-35980201 | None:intergenic | 40.0% | |
| ATACTACTCTTGCAACTGAG+AGG | + | chr6_2:35980304-35980323 | None:intergenic | 40.0% | |
| ATTTCAGACGATAGTTGGCA+GGG | + | chr6_2:35980355-35980374 | None:intergenic | 40.0% | |
| TATTTCAGACGATAGTTGGC+AGG | + | chr6_2:35980356-35980375 | None:intergenic | 40.0% | |
| ATTAATGTGTGTAGCGGTGT+CGG | - | chr6_2:35981011-35981030 | Msa0916350:intron | 40.0% | |
| TACCTGACACGACATTGATA+CGG | + | chr6_2:35981073-35981092 | None:intergenic | 40.0% | |
| TGGTTCCATACCTTTAGTGA+TGG | - | chr6_2:35981198-35981217 | Msa0916350:intron | 40.0% | |
| AGGAACCATCACTAAAGGTA+TGG | + | chr6_2:35981206-35981225 | None:intergenic | 40.0% | |
| TTTGGAGGAACCATCACTAA+AGG | + | chr6_2:35981211-35981230 | None:intergenic | 40.0% | |
| GTGTAGAAGTGAGTGATAGT+AGG | - | chr6_2:35981284-35981303 | Msa0916350:intron | 40.0% | |
| !! | CTTCTCATGTAGTTTGCTCA+TGG | + | chr6_2:35981352-35981371 | None:intergenic | 40.0% |
| TTTGTTTGTTCCTTGCTTGG+TGG | + | chr6_2:35981705-35981724 | None:intergenic | 40.0% | |
| TACAGCTAGAACGAACTCAA+GGG | - | chr6_2:35981875-35981894 | Msa0916350:intron | 40.0% | |
| !! | TGTGATACACGCTTTAGGAT+AGG | + | chr6_2:35982172-35982191 | None:intergenic | 40.0% |
| ATCCTAAAGCGTGTATCACA+TGG | - | chr6_2:35982172-35982191 | Msa0916350:intron | 40.0% | |
| ! | TCTTTTGTCCCGTAGAAAAC+AGG | - | chr6_2:35982429-35982448 | Msa0916350:intron | 40.0% |
| ! | CTTTTGTCCCGTAGAAAACA+GGG | - | chr6_2:35982430-35982449 | Msa0916350:intron | 40.0% |
| ! | TTTTGTCCCGTAGAAAACAG+GGG | - | chr6_2:35982431-35982450 | Msa0916350:intron | 40.0% |
| ! | CATTTTCCCCTGTTTTCTAC+GGG | + | chr6_2:35982440-35982459 | None:intergenic | 40.0% |
| ACCAAGAGTTGTCACTATGT+CGG | + | chr6_2:35982590-35982609 | None:intergenic | 40.0% | |
| CACATGACAATGCAAGCATT+AGG | - | chr6_2:35982637-35982656 | Msa0916350:intron | 40.0% | |
| !!! | CAACCCTTTGGTTTTGGTTA+TGG | + | chr6_2:35982760-35982779 | None:intergenic | 40.0% |
| !! | GTTCAACAACCCTTTGGTTT+TGG | + | chr6_2:35982766-35982785 | None:intergenic | 40.0% |
| TCTAAGAAAGACAAGGAAGG+TGG | + | chr6_2:35982901-35982920 | None:intergenic | 40.0% | |
| AGGAAACATCATTTCCTGCA+TGG | - | chr6_2:35983038-35983057 | Msa0916350:intron | 40.0% | |
| TTTCTTCTCTGCAATGGTGA+AGG | + | chr6_2:35983417-35983436 | None:intergenic | 40.0% | |
| GCAGAGAAGAAAACATCTTG+CGG | - | chr6_2:35983425-35983444 | Msa0916350:intron | 40.0% | |
| CATCTTCAAAACAACCCACA+AGG | - | chr6_2:35983475-35983494 | Msa0916350:intron | 40.0% | |
| ACCAAAACCCTAGATCTAGA+AGG | + | chr6_2:35983608-35983627 | None:intergenic | 40.0% | |
| GGTGGCTGATTAAAGGAATT+TGG | - | chr6_2:35983714-35983733 | Msa0916350:intron | 40.0% | |
| GGCTGATTAAAGGAATTTGG+TGG | - | chr6_2:35983717-35983736 | Msa0916350:intron | 40.0% | |
| !! | TGGTGGAGAATTTAGGGTTT+TGG | - | chr6_2:35983737-35983756 | Msa0916350:intron | 40.0% |
| AGTGTGATAGATTTCCCATC+AGG | - | chr6_2:35983851-35983870 | Msa0916350:intron | 40.0% | |
| TAACTGATGGGAAAACCCTT+TGG | - | chr6_2:35983932-35983951 | Msa0916350:intron | 40.0% | |
| ! | ACTTGATGGCAAAAGCAACA+CGG | + | chr6_2:35983986-35984005 | None:intergenic | 40.0% |
| TCAGTGGACCAATTACTTGA+TGG | + | chr6_2:35984000-35984019 | None:intergenic | 40.0% | |
| AAGTAATTGGTCCACTGATG+TGG | - | chr6_2:35984002-35984021 | Msa0916350:intron | 40.0% | |
| TCAAATGGTGCAGGATACAA+TGG | + | chr6_2:35984335-35984354 | None:intergenic | 40.0% | |
| ATTGTATCCTGCACCATTTG+AGG | - | chr6_2:35984334-35984353 | Msa0916350:intron | 40.0% | |
| AAAACTTCCTCAAATGGTGC+AGG | + | chr6_2:35984344-35984363 | None:intergenic | 40.0% | |
| !! | GAGGAAGTTTTGCTTTTGGA+AGG | - | chr6_2:35984353-35984372 | Msa0916350:intron | 40.0% |
| GGCTGAAAGATTATCACAAG+AGG | - | chr6_2:35984388-35984407 | Msa0916350:intron | 40.0% | |
| ! | TGGTGCCAATTTGTCTTCAT+TGG | - | chr6_2:35984520-35984539 | Msa0916350:CDS | 40.0% |
| ATGCACTTGAGAGGGATATT+AGG | + | chr6_2:35984660-35984679 | None:intergenic | 40.0% | |
| !! | CTTTTGGAAATGCACTTGAG+AGG | + | chr6_2:35984669-35984688 | None:intergenic | 40.0% |
| GAGTCAGGTAACTGTACTAC+AGG | - | chr6_2:35979368-35979387 | Msa0916350:intron | 45.0% | |
| TCCTTGAATGCGTTCAAGTC+TGG | - | chr6_2:35979484-35979503 | Msa0916350:intron | 45.0% | |
| CCTTGAATGCGTTCAAGTCT+GGG | - | chr6_2:35979485-35979504 | Msa0916350:intron | 45.0% | |
| CTTGAATGCGTTCAAGTCTG+GGG | - | chr6_2:35979486-35979505 | Msa0916350:intron | 45.0% | |
| GTCCCAACCGATGTAACTAA+AGG | - | chr6_2:35979674-35979693 | Msa0916350:CDS | 45.0% | |
| AACATGCTGGGAAACCAAAG+AGG | - | chr6_2:35980184-35980203 | Msa0916350:intron | 45.0% | |
| GAAGAGTGAGGACTCTGATA+AGG | + | chr6_2:35980282-35980301 | None:intergenic | 45.0% | |
| !! | GTTTTTGAGCAATTTGGGGC+TGG | + | chr6_2:35981310-35981329 | None:intergenic | 45.0% |
| !! | GTAGTTTGCTCATGGCTACT+TGG | + | chr6_2:35981344-35981363 | None:intergenic | 45.0% |
| CTTGTATGTCTCTGTGGCTT+GGG | + | chr6_2:35981573-35981592 | None:intergenic | 45.0% | |
| CTACAGCTAGAACGAACTCA+AGG | - | chr6_2:35981874-35981893 | Msa0916350:intron | 45.0% | |
| ACTCAAGGGAGTTAATAGCC+AGG | - | chr6_2:35981889-35981908 | Msa0916350:intron | 45.0% | |
| !! | CACGCTTTAGGATAGGTTAG+AGG | + | chr6_2:35982165-35982184 | None:intergenic | 45.0% |
| CACCATGTGATACACGCTTT+AGG | + | chr6_2:35982177-35982196 | None:intergenic | 45.0% | |
| CTAAAGCGTGTATCACATGG+TGG | - | chr6_2:35982175-35982194 | Msa0916350:intron | 45.0% | |
| ACCGACATAGTGACAACTCT+TGG | - | chr6_2:35982586-35982605 | Msa0916350:intron | 45.0% | |
| AAGAAACTGAAGGAGGAGGT+GGG | + | chr6_2:35982867-35982886 | None:intergenic | 45.0% | |
| AAGGAAGAAACTGAAGGAGG+AGG | + | chr6_2:35982871-35982890 | None:intergenic | 45.0% | |
| GAGAAGGAAGAAACTGAAGG+AGG | + | chr6_2:35982874-35982893 | None:intergenic | 45.0% | |
| GGAGAGAAGGAAGAAACTGA+AGG | + | chr6_2:35982877-35982896 | None:intergenic | 45.0% | |
| AAGAAAGACAAGGAAGGTGG+TGG | + | chr6_2:35982898-35982917 | None:intergenic | 45.0% | |
| CATTTCCTGCATGGTGTACT+TGG | - | chr6_2:35983047-35983066 | Msa0916350:intron | 45.0% | |
| GTTTCAAGAGAAACCGTGAG+TGG | - | chr6_2:35983349-35983368 | Msa0916350:intron | 45.0% | |
| AGAGAAACCGTGAGTGGAAA+AGG | - | chr6_2:35983355-35983374 | Msa0916350:intron | 45.0% | |
| GAGAAACCGTGAGTGGAAAA+GGG | - | chr6_2:35983356-35983375 | Msa0916350:intron | 45.0% | |
| AGAAACCGTGAGTGGAAAAG+GGG | - | chr6_2:35983357-35983376 | Msa0916350:intron | 45.0% | |
| ! | CAATTCCCCTTTTCCACTCA+CGG | + | chr6_2:35983365-35983384 | None:intergenic | 45.0% |
| !! | GCCTTCTAGATCTAGGGTTT+TGG | - | chr6_2:35983604-35983623 | Msa0916350:intron | 45.0% |
| !! | TAGGGTTTTGGTCCAACAAG+AGG | - | chr6_2:35983616-35983635 | Msa0916350:intron | 45.0% |
| !! | AGGGTTTTGGTCCAACAAGA+GGG | - | chr6_2:35983617-35983636 | Msa0916350:intron | 45.0% |
| ! | TTTTGGTCCAACAAGAGGGA+AGG | - | chr6_2:35983621-35983640 | Msa0916350:intron | 45.0% |
| TTTGGTCCAACAAGAGGGAA+GGG | - | chr6_2:35983622-35983641 | Msa0916350:intron | 45.0% | |
| !! | TTGTGGTGGTGGCTGATTAA+AGG | - | chr6_2:35983707-35983726 | Msa0916350:intron | 45.0% |
| CATCAGAGATTCCACATCAG+TGG | + | chr6_2:35984016-35984035 | None:intergenic | 45.0% | |
| ATCTGGGCTCACAAAGGAAA+TGG | + | chr6_2:35984172-35984191 | None:intergenic | 45.0% | |
| ! | TTTGGAAGGGTGTGCTATTG+AGG | - | chr6_2:35984367-35984386 | Msa0916350:intron | 45.0% |
| !! | ATTAATACTATTATTTATAA+AGG | + | chr6_2:35980968-35980987 | None:intergenic | 5.0% |
| !! | GATATATTAATATATATTAT+AGG | + | chr6_2:35982946-35982965 | None:intergenic | 5.0% |
| !! | AAAAATGAAATAAAATTAAA+AGG | - | chr6_2:35983326-35983345 | Msa0916350:intron | 5.0% |
| !! | AAAATGAAATAAAATTAAAA+GGG | - | chr6_2:35983327-35983346 | Msa0916350:intron | 5.0% |
| CCCAGACTTGAACGCATTCA+AGG | + | chr6_2:35979488-35979507 | None:intergenic | 50.0% | |
| TGCAACTGAGAGGAAGAGTG+AGG | + | chr6_2:35980294-35980313 | None:intergenic | 50.0% | |
| GATGTCAGTGACGGCACTTA+AGG | + | chr6_2:35980333-35980352 | None:intergenic | 50.0% | |
| GTCCGTATCAATGTCGTGTC+AGG | - | chr6_2:35981068-35981087 | Msa0916350:intron | 50.0% | |
| GTCGTGTCAGGTATGCATGT+TGG | - | chr6_2:35981080-35981099 | Msa0916350:intron | 50.0% | |
| CCTTGTATGTCTCTGTGGCT+TGG | + | chr6_2:35981574-35981593 | None:intergenic | 50.0% | |
| CCAAGCCACAGAGACATACA+AGG | - | chr6_2:35981571-35981590 | Msa0916350:intron | 50.0% | |
| ! | GTTTGTTCCTTGCTTGGTGG+AGG | + | chr6_2:35981702-35981721 | None:intergenic | 50.0% |
| TCAAATGCCTGTGCAGCTTG+AGG | + | chr6_2:35981748-35981767 | None:intergenic | 50.0% | |
| !! | CCTGGTGCTGTACTGCTATA+AGG | + | chr6_2:35981925-35981944 | None:intergenic | 50.0% |
| CCTTATAGCAGTACAGCACC+AGG | - | chr6_2:35981922-35981941 | Msa0916350:intron | 50.0% | |
| AGAAACTGAAGGAGGAGGTG+GGG | + | chr6_2:35982866-35982885 | None:intergenic | 50.0% | |
| GAAGAAACTGAAGGAGGAGG+TGG | + | chr6_2:35982868-35982887 | None:intergenic | 50.0% | |
| TGAGTTCCCTTCCCTCTTGT+TGG | + | chr6_2:35983631-35983650 | None:intergenic | 50.0% | |
| TGATGGCAAAAGCAACACGG+TGG | + | chr6_2:35983983-35984002 | None:intergenic | 50.0% | |
| CTCATGACCGTGTGATCAAC+AGG | - | chr6_2:35984101-35984120 | Msa0916350:intron | 50.0% | |
| ACAGGATTACATCTACCGCG+TGG | - | chr6_2:35984119-35984138 | Msa0916350:intron | 50.0% | |
| CAGGATTACATCTACCGCGT+GGG | - | chr6_2:35984120-35984139 | Msa0916350:intron | 50.0% | |
| ATTACATCTACCGCGTGGGA+TGG | - | chr6_2:35984124-35984143 | Msa0916350:intron | 50.0% | |
| CCTTTCATCTGGGCTCACAA+AGG | + | chr6_2:35984178-35984197 | None:intergenic | 50.0% | |
| CCTTTGTGAGCCCAGATGAA+AGG | - | chr6_2:35984175-35984194 | Msa0916350:intron | 50.0% | |
| GTTGGCAGGGATGTCAGTGA+CGG | + | chr6_2:35980342-35980361 | None:intergenic | 55.0% | |
| ACATGGACCTCCACCAAGCA+AGG | - | chr6_2:35981692-35981711 | Msa0916350:intron | 55.0% | |
| GAAACTGAAGGAGGAGGTGG+GGG | + | chr6_2:35982865-35982884 | None:intergenic | 55.0% | |
| !! | CAAGGAAGGTGGTGGAGAGA+AGG | + | chr6_2:35982890-35982909 | None:intergenic | 55.0% |
| AGGAGCCAAGTACACCATGC+AGG | + | chr6_2:35983055-35983074 | None:intergenic | 55.0% | |
| GATCAACAGTCCATCCCACG+CGG | + | chr6_2:35984137-35984156 | None:intergenic | 55.0% | |
| AGTGGGTCCTCAAGCTGCAC+AGG | - | chr6_2:35981738-35981757 | Msa0916350:intron | 60.0% | |
| ACTGAAGGAGGAGGTGGGGG+AGG | + | chr6_2:35982862-35982881 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 35979258 | 35984797 | 35979258 | ID=Msa0916350;Name=Msa0916350 |
| chr6_2 | mRNA | 35979258 | 35984797 | 35979258 | ID=Msa0916350-mRNA-1;Parent=Msa0916350;Name=Msa0916350-mRNA-1;_AED=0.22;_eAED=0.35;_QI=0|0|0|0.8|0.25|0.2|5|0|125 |
| chr6_2 | exon | 35984681 | 35984797 | 35984681 | ID=Msa0916350-mRNA-1:exon:6282;Parent=Msa0916350-mRNA-1 |
| chr6_2 | exon | 35984491 | 35984586 | 35984491 | ID=Msa0916350-mRNA-1:exon:6281;Parent=Msa0916350-mRNA-1 |
| chr6_2 | exon | 35979897 | 35979958 | 35979897 | ID=Msa0916350-mRNA-1:exon:6280;Parent=Msa0916350-mRNA-1 |
| chr6_2 | exon | 35979646 | 35979733 | 35979646 | ID=Msa0916350-mRNA-1:exon:6279;Parent=Msa0916350-mRNA-1 |
| chr6_2 | exon | 35979258 | 35979272 | 35979258 | ID=Msa0916350-mRNA-1:exon:6278;Parent=Msa0916350-mRNA-1 |
| chr6_2 | CDS | 35984681 | 35984797 | 35984681 | ID=Msa0916350-mRNA-1:cds;Parent=Msa0916350-mRNA-1 |
| chr6_2 | CDS | 35984491 | 35984586 | 35984491 | ID=Msa0916350-mRNA-1:cds;Parent=Msa0916350-mRNA-1 |
| chr6_2 | CDS | 35979897 | 35979958 | 35979897 | ID=Msa0916350-mRNA-1:cds;Parent=Msa0916350-mRNA-1 |
| chr6_2 | CDS | 35979646 | 35979733 | 35979646 | ID=Msa0916350-mRNA-1:cds;Parent=Msa0916350-mRNA-1 |
| chr6_2 | CDS | 35979258 | 35979272 | 35979258 | ID=Msa0916350-mRNA-1:cds;Parent=Msa0916350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
