Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0916400 | XP_013443354.2 | 97.806 | 638 | 12 | 1 | 1 | 638 | 1 | 636 | 0.0 | 1302 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0916400 | sp|O80844|PMTG_ARATH | 62.080 | 625 | 212 | 6 | 24 | 636 | 12 | 623 | 0.0 | 844 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0037660 | Msa0916400 | 0.801324 | 9.500739e-49 | -8.615850e-47 |
Msa0891700 | Msa0916400 | 0.873651 | 1.246050e-67 | -8.615850e-47 |
Msa0916400 | Msa0956350 | 0.802448 | 5.583748e-49 | -8.615850e-47 |
Msa0916400 | Msa0991630 | 0.849788 | 2.581875e-60 | -8.615850e-47 |
Msa0916400 | Msa1052730 | 0.819235 | 1.291924e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0916400 | MtrunA17_Chr6g0472571 | 97.806 | 638 | 12 | 1 | 1 | 638 | 1 | 636 | 0.0 | 1302 |
Msa0916400 | MtrunA17_Chr1g0203741 | 71.895 | 612 | 154 | 6 | 24 | 629 | 19 | 618 | 0.0 | 926 |
Msa0916400 | MtrunA17_Chr8g0350391 | 62.998 | 627 | 214 | 5 | 22 | 636 | 18 | 638 | 0.0 | 857 |
Msa0916400 | MtrunA17_Chr7g0246701 | 62.794 | 637 | 216 | 6 | 15 | 636 | 3 | 633 | 0.0 | 854 |
Msa0916400 | MtrunA17_Chr8g0388881 | 58.292 | 609 | 242 | 6 | 32 | 636 | 28 | 628 | 0.0 | 773 |
Msa0916400 | MtrunA17_Chr4g0055031 | 56.301 | 611 | 252 | 7 | 27 | 637 | 17 | 612 | 0.0 | 739 |
Msa0916400 | MtrunA17_Chr8g0361791 | 54.849 | 629 | 257 | 8 | 15 | 637 | 2 | 609 | 0.0 | 716 |
Msa0916400 | MtrunA17_Chr5g0416991 | 55.229 | 612 | 248 | 9 | 31 | 637 | 18 | 608 | 0.0 | 699 |
Msa0916400 | MtrunA17_Chr3g0092501 | 52.373 | 611 | 259 | 8 | 31 | 637 | 21 | 603 | 0.0 | 655 |
Msa0916400 | MtrunA17_Chr7g0214551 | 53.759 | 532 | 235 | 5 | 87 | 612 | 26 | 552 | 0.0 | 610 |
Msa0916400 | MtrunA17_Chr8g0369481 | 51.040 | 529 | 246 | 9 | 107 | 630 | 70 | 590 | 0.0 | 535 |
Msa0916400 | MtrunA17_Chr5g0409411 | 49.526 | 527 | 253 | 8 | 107 | 628 | 72 | 590 | 4.33e-177 | 516 |
Msa0916400 | MtrunA17_Chr8g0350351 | 43.962 | 530 | 268 | 9 | 110 | 629 | 91 | 601 | 1.61e-165 | 486 |
Msa0916400 | MtrunA17_Chr7g0246681 | 44.612 | 529 | 264 | 9 | 110 | 628 | 78 | 587 | 8.74e-163 | 479 |
Msa0916400 | MtrunA17_Chr1g0167381 | 39.399 | 599 | 314 | 13 | 31 | 604 | 14 | 588 | 3.46e-149 | 445 |
Msa0916400 | MtrunA17_Chr3g0112341 | 42.315 | 527 | 276 | 11 | 110 | 625 | 156 | 665 | 2.61e-147 | 442 |
Msa0916400 | MtrunA17_Chr5g0435751 | 40.832 | 529 | 269 | 9 | 106 | 625 | 124 | 617 | 1.50e-143 | 431 |
Msa0916400 | MtrunA17_Chr1g0183721 | 40.526 | 570 | 297 | 12 | 82 | 633 | 45 | 590 | 2.55e-143 | 429 |
Msa0916400 | MtrunA17_Chr1g0187601 | 42.259 | 549 | 283 | 12 | 107 | 637 | 91 | 623 | 3.55e-143 | 430 |
Msa0916400 | MtrunA17_Chr1g0159741 | 39.964 | 558 | 304 | 14 | 84 | 627 | 118 | 658 | 1.32e-139 | 422 |
Msa0916400 | MtrunA17_Chr3g0130381 | 39.587 | 629 | 313 | 21 | 44 | 628 | 171 | 776 | 5.78e-138 | 422 |
Msa0916400 | MtrunA17_Chr8g0384431 | 40.266 | 601 | 287 | 22 | 70 | 624 | 227 | 801 | 1.26e-135 | 416 |
Msa0916400 | MtrunA17_Chr3g0125511 | 40.410 | 537 | 275 | 14 | 113 | 628 | 230 | 742 | 1.58e-130 | 401 |
Msa0916400 | MtrunA17_Chr5g0437501 | 40.296 | 541 | 267 | 16 | 112 | 628 | 97 | 605 | 6.38e-130 | 395 |
Msa0916400 | MtrunA17_Chr1g0171781 | 37.342 | 632 | 339 | 15 | 19 | 629 | 9 | 604 | 2.23e-129 | 394 |
Msa0916400 | MtrunA17_Chr8g0372471 | 40.467 | 514 | 277 | 12 | 115 | 615 | 386 | 883 | 1.50e-128 | 400 |
Msa0916400 | MtrunA17_Chr3g0113981 | 41.551 | 503 | 255 | 15 | 115 | 603 | 174 | 651 | 5.76e-126 | 387 |
Msa0916400 | MtrunA17_Chr1g0155141 | 37.030 | 532 | 281 | 17 | 113 | 628 | 206 | 699 | 5.88e-104 | 330 |
Msa0916400 | MtrunA17_Chr5g0426281 | 33.153 | 555 | 310 | 17 | 110 | 632 | 149 | 674 | 3.23e-93 | 301 |
Msa0916400 | MtrunA17_Chr3g0115931 | 32.194 | 556 | 324 | 13 | 110 | 632 | 157 | 692 | 8.87e-93 | 301 |
Msa0916400 | MtrunA17_Chr5g0404771 | 48.347 | 242 | 100 | 6 | 116 | 341 | 329 | 561 | 1.94e-70 | 238 |
Msa0916400 | MtrunA17_Chr5g0404761 | 36.594 | 276 | 156 | 7 | 356 | 619 | 1 | 269 | 2.78e-55 | 189 |
Msa0916400 | MtrunA17_Chr4g0043121 | 31.646 | 316 | 198 | 6 | 110 | 414 | 89 | 397 | 3.96e-52 | 185 |
Msa0916400 | MtrunA17_Chr4g0043131 | 44.118 | 136 | 72 | 3 | 485 | 617 | 40 | 174 | 4.36e-33 | 125 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0916400 | AT2G45750.1 | 62.080 | 625 | 212 | 6 | 24 | 636 | 12 | 623 | 0.0 | 844 |
Msa0916400 | AT4G00750.1 | 60.692 | 636 | 227 | 9 | 14 | 637 | 7 | 631 | 0.0 | 826 |
Msa0916400 | AT1G33170.1 | 56.704 | 619 | 248 | 5 | 32 | 633 | 24 | 639 | 0.0 | 766 |
Msa0916400 | AT4G10440.1 | 58.211 | 615 | 244 | 6 | 24 | 634 | 17 | 622 | 0.0 | 764 |
Msa0916400 | AT1G26850.2 | 55.267 | 617 | 254 | 8 | 25 | 634 | 13 | 614 | 0.0 | 717 |
Msa0916400 | AT1G26850.1 | 55.267 | 617 | 254 | 8 | 25 | 634 | 13 | 614 | 0.0 | 717 |
Msa0916400 | AT4G18030.1 | 54.925 | 599 | 255 | 5 | 32 | 630 | 22 | 605 | 0.0 | 701 |
Msa0916400 | AT2G43200.2 | 52.399 | 521 | 239 | 5 | 107 | 623 | 91 | 606 | 0.0 | 583 |
Msa0916400 | AT2G43200.1 | 52.399 | 521 | 239 | 5 | 107 | 623 | 91 | 606 | 0.0 | 583 |
Msa0916400 | AT1G26850.3 | 52.381 | 504 | 220 | 7 | 25 | 522 | 13 | 502 | 0.0 | 547 |
Msa0916400 | AT1G31850.1 | 46.066 | 610 | 284 | 15 | 31 | 630 | 24 | 598 | 0.0 | 540 |
Msa0916400 | AT1G31850.2 | 46.066 | 610 | 284 | 15 | 31 | 630 | 24 | 598 | 0.0 | 540 |
Msa0916400 | AT1G31850.4 | 46.066 | 610 | 284 | 15 | 31 | 630 | 24 | 598 | 0.0 | 540 |
Msa0916400 | AT1G31850.3 | 46.066 | 610 | 284 | 15 | 31 | 630 | 24 | 598 | 0.0 | 540 |
Msa0916400 | AT4G19120.1 | 43.974 | 614 | 300 | 11 | 31 | 637 | 23 | 599 | 3.81e-179 | 521 |
Msa0916400 | AT4G19120.2 | 43.974 | 614 | 300 | 11 | 31 | 637 | 23 | 599 | 3.81e-179 | 521 |
Msa0916400 | AT4G00740.1 | 44.382 | 534 | 270 | 7 | 110 | 634 | 84 | 599 | 2.77e-165 | 486 |
Msa0916400 | AT4G00740.2 | 44.382 | 534 | 270 | 7 | 110 | 634 | 84 | 599 | 2.77e-165 | 486 |
Msa0916400 | AT2G39750.1 | 43.364 | 535 | 269 | 12 | 106 | 626 | 176 | 690 | 4.21e-154 | 461 |
Msa0916400 | AT5G06050.1 | 40.283 | 566 | 308 | 11 | 77 | 630 | 119 | 666 | 1.31e-149 | 449 |
Msa0916400 | AT4G19120.3 | 44.250 | 513 | 243 | 10 | 31 | 536 | 23 | 499 | 2.76e-148 | 439 |
Msa0916400 | AT1G04430.1 | 39.055 | 635 | 325 | 15 | 31 | 633 | 14 | 618 | 5.68e-148 | 442 |
Msa0916400 | AT1G04430.3 | 39.055 | 635 | 325 | 15 | 31 | 633 | 14 | 618 | 5.68e-148 | 442 |
Msa0916400 | AT1G04430.2 | 39.055 | 635 | 325 | 15 | 31 | 633 | 14 | 618 | 5.68e-148 | 442 |
Msa0916400 | AT4G14360.1 | 43.520 | 517 | 261 | 10 | 103 | 604 | 72 | 572 | 2.71e-144 | 432 |
Msa0916400 | AT4G14360.2 | 43.520 | 517 | 261 | 10 | 103 | 604 | 72 | 572 | 2.71e-144 | 432 |
Msa0916400 | AT5G14430.1 | 42.831 | 544 | 276 | 12 | 108 | 632 | 81 | 608 | 4.09e-142 | 427 |
Msa0916400 | AT1G77260.1 | 41.210 | 529 | 279 | 12 | 110 | 626 | 146 | 654 | 6.76e-142 | 428 |
Msa0916400 | AT3G23300.2 | 42.278 | 518 | 268 | 10 | 103 | 605 | 75 | 576 | 1.50e-140 | 423 |
Msa0916400 | AT3G23300.1 | 42.278 | 518 | 268 | 10 | 103 | 605 | 75 | 576 | 1.50e-140 | 423 |
Msa0916400 | AT5G14430.2 | 42.279 | 544 | 279 | 12 | 108 | 632 | 81 | 608 | 6.91e-140 | 421 |
Msa0916400 | AT3G51070.1 | 42.026 | 533 | 267 | 17 | 115 | 628 | 380 | 889 | 5.06e-133 | 412 |
Msa0916400 | AT2G34300.2 | 41.220 | 541 | 270 | 15 | 116 | 635 | 250 | 763 | 8.76e-133 | 408 |
Msa0916400 | AT2G34300.3 | 41.220 | 541 | 270 | 15 | 116 | 635 | 250 | 763 | 8.76e-133 | 408 |
Msa0916400 | AT2G34300.1 | 41.220 | 541 | 270 | 15 | 116 | 635 | 250 | 763 | 8.76e-133 | 408 |
Msa0916400 | AT5G04060.1 | 38.750 | 560 | 302 | 9 | 87 | 629 | 63 | 598 | 2.05e-132 | 402 |
Msa0916400 | AT3G56080.1 | 40.152 | 528 | 268 | 14 | 116 | 628 | 114 | 608 | 2.13e-132 | 402 |
Msa0916400 | AT5G64030.1 | 41.243 | 531 | 272 | 15 | 116 | 628 | 308 | 816 | 9.44e-132 | 407 |
Msa0916400 | AT3G10200.1 | 40.296 | 541 | 276 | 13 | 110 | 629 | 75 | 589 | 1.04e-131 | 399 |
Msa0916400 | AT1G29470.1 | 40.113 | 531 | 282 | 15 | 116 | 631 | 250 | 759 | 1.56e-130 | 402 |
Msa0916400 | AT1G29470.2 | 40.113 | 531 | 282 | 15 | 116 | 631 | 250 | 759 | 1.56e-130 | 402 |
Msa0916400 | AT2G40280.1 | 40.417 | 527 | 267 | 17 | 115 | 628 | 89 | 581 | 2.85e-129 | 393 |
Msa0916400 | AT3G10200.2 | 40.272 | 514 | 259 | 13 | 110 | 601 | 75 | 562 | 5.24e-123 | 377 |
Msa0916400 | AT3G51070.2 | 43.656 | 465 | 228 | 15 | 115 | 562 | 380 | 827 | 9.54e-117 | 368 |
Msa0916400 | AT3G56080.2 | 40.909 | 462 | 233 | 13 | 116 | 562 | 114 | 550 | 1.40e-116 | 359 |
Msa0916400 | AT1G19430.1 | 37.358 | 530 | 283 | 16 | 113 | 628 | 228 | 722 | 3.08e-103 | 330 |
Msa0916400 | AT1G19430.3 | 37.358 | 530 | 283 | 16 | 113 | 628 | 228 | 722 | 3.08e-103 | 330 |
Msa0916400 | AT1G13860.4 | 31.250 | 544 | 311 | 12 | 106 | 617 | 80 | 592 | 1.45e-91 | 296 |
Msa0916400 | AT1G13860.3 | 31.250 | 544 | 311 | 12 | 106 | 617 | 80 | 592 | 1.45e-91 | 296 |
Msa0916400 | AT1G13860.1 | 31.250 | 544 | 311 | 12 | 106 | 617 | 80 | 592 | 1.45e-91 | 296 |
Msa0916400 | AT1G13860.5 | 31.250 | 544 | 311 | 12 | 106 | 617 | 80 | 592 | 1.45e-91 | 296 |
Msa0916400 | AT1G78240.1 | 32.613 | 555 | 312 | 17 | 110 | 627 | 149 | 678 | 1.67e-88 | 290 |
Msa0916400 | AT1G78240.2 | 32.613 | 555 | 312 | 17 | 110 | 627 | 149 | 678 | 1.67e-88 | 290 |
Msa0916400 | AT2G03480.2 | 30.499 | 541 | 306 | 11 | 106 | 617 | 85 | 584 | 5.29e-86 | 281 |
Msa0916400 | AT2G03480.1 | 31.144 | 533 | 324 | 12 | 106 | 617 | 85 | 595 | 1.86e-85 | 280 |
Msa0916400 | AT1G13860.2 | 32.898 | 459 | 252 | 12 | 188 | 617 | 5 | 436 | 1.12e-80 | 262 |
Msa0916400 | AT1G19430.2 | 33.166 | 398 | 223 | 13 | 113 | 497 | 228 | 595 | 2.33e-56 | 201 |
Msa0916400 | AT2G03480.3 | 32.155 | 283 | 178 | 3 | 106 | 379 | 85 | 362 | 5.30e-48 | 174 |
Find 168 sgRNAs with CRISPR-Local
Find 502 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTAGACATGAATGCTTATT+TGG | 0.073772 | 6_2:-36433078 | Msa0916400:CDS |
CACTTGTTAAATATCCTATT+TGG | 0.102129 | 6_2:-36433040 | Msa0916400:CDS |
TTTAGCTACATTCTCAATTT+TGG | 0.149493 | 6_2:+36434603 | None:intergenic |
TTGGAGGGTTTGAAGGGTTT+TGG | 0.222257 | 6_2:+36440473 | None:intergenic |
CTTCTTTGTTGGACACTTTA+GGG | 0.225235 | 6_2:+36433291 | None:intergenic |
TGATTGGAATGTATCATAAT+TGG | 0.257260 | 6_2:-36432953 | Msa0916400:intron |
TTTAAGATTTCATGTTTCTT+AGG | 0.258970 | 6_2:+36440074 | None:intergenic |
ATTTCAAAGGGGACCATTAA+AGG | 0.260047 | 6_2:-36433209 | Msa0916400:CDS |
TCTTCTTTGTTGGACACTTT+AGG | 0.260669 | 6_2:+36433290 | None:intergenic |
TTAAATACATTGTCTATTAG+AGG | 0.263740 | 6_2:-36432054 | Msa0916400:three_prime_UTR |
TATTTGCTGTGAAGAAATAT+TGG | 0.264293 | 6_2:-36432279 | Msa0916400:CDS |
ATTGCAAATTCACTCAAAAT+AGG | 0.265035 | 6_2:-36434510 | Msa0916400:CDS |
GACAATGTATTTAACTAATA+AGG | 0.265408 | 6_2:+36432063 | None:intergenic |
CTTATTCCATGGCCTGAATA+TGG | 0.267383 | 6_2:-36435237 | Msa0916400:intron |
ACCTGAAATTTCTTCTTTGT+TGG | 0.284477 | 6_2:+36433280 | None:intergenic |
CAATTCGCTGGAAGAAATAT+TGG | 0.311579 | 6_2:-36434669 | Msa0916400:CDS |
CTCAAATGACAATACTATTT+AGG | 0.311881 | 6_2:-36432245 | Msa0916400:exon |
TAGAGATGATGTTGATATAT+TGG | 0.313175 | 6_2:-36432389 | Msa0916400:CDS |
TTGAGGTGTGACACCTTTAA+TGG | 0.321435 | 6_2:+36433196 | None:intergenic |
GATAAGTATATTGATGATAT+TGG | 0.322381 | 6_2:-36439864 | Msa0916400:CDS |
TTATTCTGCTCTTGGCAAAA+AGG | 0.325310 | 6_2:+36434487 | None:intergenic |
CAGGTGGGGAATTAAATAAT+TGG | 0.328337 | 6_2:-36433262 | Msa0916400:CDS |
AATAAGCATTCATGTCTAAT+AGG | 0.333573 | 6_2:+36433081 | None:intergenic |
ATTATAGATTGAGAGGAGTT+TGG | 0.339322 | 6_2:+36440610 | None:intergenic |
CTAATTATTACACTTCCTTC+TGG | 0.339638 | 6_2:+36432409 | None:intergenic |
TTTCAAGAGGCCCATCTTCA+TGG | 0.344644 | 6_2:+36432314 | None:intergenic |
AGAAAGGTGATATTGCTATT+TGG | 0.345270 | 6_2:-36434555 | Msa0916400:CDS |
TCCAACAAAGAAGAAATTTC+AGG | 0.345485 | 6_2:-36433281 | Msa0916400:CDS |
CAATATTTCTTCCAGCGAAT+TGG | 0.347489 | 6_2:+36434670 | None:intergenic |
ACTTGTTAAATATCCTATTT+GGG | 0.348847 | 6_2:-36433039 | Msa0916400:CDS |
ATGTATACCTGTCATTATAA+AGG | 0.354957 | 6_2:+36432787 | None:intergenic |
ATGTATGCAGGTTGCTAGTT+GGG | 0.358547 | 6_2:-36435436 | Msa0916400:intron |
AGAGGTGTTCCTGCAATTAT+TGG | 0.359750 | 6_2:-36435327 | Msa0916400:CDS |
AGCACATACCATGCTTTGTC+AGG | 0.370155 | 6_2:+36434463 | None:intergenic |
TGTCAGGGTTATTCTGCTCT+TGG | 0.371069 | 6_2:+36434479 | None:intergenic |
TTAGACATGAATGCTTATTT+GGG | 0.377741 | 6_2:-36433077 | Msa0916400:CDS |
AATAGTACTATACCATATTC+AGG | 0.377937 | 6_2:+36435225 | None:intergenic |
TTCTACGTCCTGGTGGGTAT+TGG | 0.381477 | 6_2:-36434708 | Msa0916400:CDS |
ACACAGAATCAGCATGAATT+AGG | 0.382074 | 6_2:+36432814 | None:intergenic |
ACCACATTCATAACCCAAAT+AGG | 0.383835 | 6_2:+36433026 | None:intergenic |
TCTCAAAAGACAATCAACTA+TGG | 0.388474 | 6_2:-36433169 | Msa0916400:CDS |
TTCGGATGTGTATGGTGATC+TGG | 0.396642 | 6_2:-36432109 | Msa0916400:three_prime_UTR |
GCCATGTCAAAGGCTCTAGA+AGG | 0.400141 | 6_2:+36435276 | None:intergenic |
TTGATGTGGAGGTGTTGTTT+TGG | 0.402329 | 6_2:+36440363 | None:intergenic |
TGCAAGCAAACTTTGTTGAA+TGG | 0.402919 | 6_2:-36431960 | Msa0916400:three_prime_UTR |
GTGAGAACTGCTGTTGATAC+TGG | 0.405743 | 6_2:-36439813 | Msa0916400:CDS |
GGTGGGTATTGGATTCTATC+TGG | 0.410013 | 6_2:-36434697 | Msa0916400:CDS |
ATAAGTATATTGATGATATT+GGG | 0.413613 | 6_2:-36439863 | Msa0916400:CDS |
GTATCAACTTTAGCTTGAAT+AGG | 0.420482 | 6_2:+36433002 | None:intergenic |
TTCTTGTAACCGTTTGGTGC+TGG | 0.420744 | 6_2:+36440041 | None:intergenic |
TTCGAACGACATAAGTTGTT+CGG | 0.421737 | 6_2:-36432166 | Msa0916400:three_prime_UTR |
TGAATTAGGTCATAAGTTCT+AGG | 0.424421 | 6_2:+36432828 | None:intergenic |
GTTGTTGTGGATGTGGTTGT+TGG | 0.425040 | 6_2:+36440212 | None:intergenic |
AAAGGATTCTTGTAACCGTT+TGG | 0.425376 | 6_2:+36440035 | None:intergenic |
TGTACCTTACCGTCATTTAA+CGG | 0.426177 | 6_2:-36439973 | Msa0916400:CDS |
GTTCAATTTGCTCTTGAAAG+AGG | 0.426870 | 6_2:-36435345 | Msa0916400:CDS |
TCTGCTTTGTAGATGTGAAT+TGG | 0.430180 | 6_2:-36432467 | Msa0916400:intron |
AACAATCAACTTGGAAAAGC+TGG | 0.441002 | 6_2:-36433116 | Msa0916400:CDS |
GGAGCGCGTGTGGTCTTCAC+AGG | 0.441031 | 6_2:+36440142 | None:intergenic |
ATGTAGCTAAAAGCCTTTGT+TGG | 0.443086 | 6_2:-36434591 | Msa0916400:CDS |
AGAAGATGTTGTTGTGGATG+TGG | 0.444695 | 6_2:+36440205 | None:intergenic |
TTGTTGGACACTTTAGGGAG+TGG | 0.452460 | 6_2:+36433296 | None:intergenic |
TAAGACTTGTTAGAAGCAAA+TGG | 0.452879 | 6_2:+36432207 | None:intergenic |
GTTCTCGTTGTCTTATTCCA+TGG | 0.453451 | 6_2:-36435248 | Msa0916400:CDS |
ATATATGAAAGAGGGTTGAT+TGG | 0.453552 | 6_2:-36432969 | Msa0916400:CDS |
GGAAGAAATATTGGAAAGGA+TGG | 0.455736 | 6_2:-36434660 | Msa0916400:CDS |
AGTGTATTTGGAGGGTTTGA+AGG | 0.458351 | 6_2:+36440466 | None:intergenic |
AACAGTTTCAATTGCACCAA+GGG | 0.459276 | 6_2:-36435385 | Msa0916400:CDS |
TGTTTAGCCTTTATAATGAC+AGG | 0.459506 | 6_2:-36432794 | Msa0916400:intron |
ATGTCTCTACTTGTGGGCCA+TGG | 0.459713 | 6_2:+36440011 | None:intergenic |
GTGATGATTATTTGAGTTTG+AGG | 0.466679 | 6_2:+36440635 | None:intergenic |
ATGGTCCCCTTTGAAATCCT+AGG | 0.473543 | 6_2:+36433215 | None:intergenic |
GGTGGTACTATGTTTCCTAA+TGG | 0.474022 | 6_2:-36439891 | Msa0916400:CDS |
GGAACTTATCACCGTCAAAA+CGG | 0.476216 | 6_2:+36439925 | None:intergenic |
CAAATTGTGGACCATGAAGA+TGG | 0.476768 | 6_2:-36432325 | Msa0916400:CDS |
TTGGAAAAGCTGGTAGATAC+AGG | 0.480976 | 6_2:-36433106 | Msa0916400:CDS |
AAAGAGCATAATCAATGGCT+TGG | 0.481691 | 6_2:-36432359 | Msa0916400:CDS |
AATACAAAAGTGAGGAAGGA+AGG | 0.482029 | 6_2:+36432006 | None:intergenic |
CATAATCAATGGCTTGGAAT+GGG | 0.484368 | 6_2:-36432353 | Msa0916400:CDS |
TTGAGTTGAGTGATGAAGAT+GGG | 0.484456 | 6_2:+36440568 | None:intergenic |
ATATACTTATCAGCACCATT+AGG | 0.486668 | 6_2:+36439876 | None:intergenic |
CCTTTGTTGGAATAAAATAG+TGG | 0.487141 | 6_2:-36434578 | Msa0916400:CDS |
GCAAAGACACCAATAATTGC+AGG | 0.488389 | 6_2:+36435318 | None:intergenic |
TATTTCTTCCAGCGAATTGG+TGG | 0.489851 | 6_2:+36434673 | None:intergenic |
ACTGCTGTTGATACTGGCTG+TGG | 0.490156 | 6_2:-36439807 | Msa0916400:CDS |
CTACTTGTGGGCCATGGGAA+AGG | 0.490397 | 6_2:+36440017 | None:intergenic |
CAAGCTAAAGTTGATACACT+TGG | 0.491094 | 6_2:-36432996 | Msa0916400:CDS |
TAGTACCACCACCAGGAAAA+CGG | 0.493127 | 6_2:+36439904 | None:intergenic |
GTGAGTTATTATAGATTGAG+AGG | 0.493693 | 6_2:+36440603 | None:intergenic |
AAGTTGATTAATCTTGAAGA+TGG | 0.495272 | 6_2:-36439840 | Msa0916400:CDS |
TATCTGGTCCACCAATTCGC+TGG | 0.497419 | 6_2:-36434681 | Msa0916400:CDS |
CCAAGCCATGTCTCTACTTG+TGG | 0.501584 | 6_2:+36440004 | None:intergenic |
ACAATCTTCACCATGGCAAA+TGG | 0.502887 | 6_2:-36440509 | Msa0916400:exon |
TCCTATTTGGGTTATGAATG+TGG | 0.505514 | 6_2:-36433027 | Msa0916400:CDS |
TATGTATGCAGGTTGCTAGT+TGG | 0.506720 | 6_2:-36435437 | Msa0916400:intron |
AAAAGTTTCTCTCTTTCAAG+AGG | 0.510531 | 6_2:+36432301 | None:intergenic |
ACCCCACCTAGGATTTCAAA+GGG | 0.515316 | 6_2:-36433221 | Msa0916400:CDS |
CTAAATAGTATTGTCATTTG+AGG | 0.516055 | 6_2:+36432246 | None:intergenic |
CCCCTTTGAAATCCTAGGTG+GGG | 0.516176 | 6_2:+36433220 | None:intergenic |
TGTCTCTACTTGTGGGCCAT+GGG | 0.516352 | 6_2:+36440012 | None:intergenic |
TGGAATAAAATAGTGGAGAA+AGG | 0.516837 | 6_2:-36434571 | Msa0916400:CDS |
GCATAATCAATGGCTTGGAA+TGG | 0.517234 | 6_2:-36432354 | Msa0916400:CDS |
GTGTATTTGGAGGGTTTGAA+GGG | 0.520547 | 6_2:+36440467 | None:intergenic |
ACATATTGCTAGAGATGGAT+AGG | 0.520899 | 6_2:-36432441 | Msa0916400:CDS |
CAAGCCATGTCTCTACTTGT+GGG | 0.523142 | 6_2:+36440005 | None:intergenic |
CCCTTCTAGAGCCTTTGACA+TGG | 0.525416 | 6_2:-36435277 | Msa0916400:CDS |
TCTTAGGACAGTGTCGTTCG+CGG | 0.526064 | 6_2:+36440090 | None:intergenic |
GACATGAATGCTTATTTGGG+TGG | 0.530858 | 6_2:-36433074 | Msa0916400:CDS |
GGAAGACATATTGCTAGAGA+TGG | 0.531377 | 6_2:-36432446 | Msa0916400:CDS |
ATAGTATTGTCATTTGAGGC+AGG | 0.531671 | 6_2:+36432250 | None:intergenic |
TCCCCTTTGAAATCCTAGGT+GGG | 0.532337 | 6_2:+36433219 | None:intergenic |
TTGAGTGATGAAGATGGGTT+TGG | 0.532812 | 6_2:+36440573 | None:intergenic |
AGGGAAAGGTAATCTCTTTG+AGG | 0.534626 | 6_2:+36435296 | None:intergenic |
TCCACCGTTAAATGACGGTA+AGG | 0.535817 | 6_2:+36439969 | None:intergenic |
ATAGATTGAGAGGAGTTTGG+TGG | 0.536412 | 6_2:+36440613 | None:intergenic |
TTAAAATACAAAAGTGAGGA+AGG | 0.541004 | 6_2:+36432002 | None:intergenic |
TGTATGCAGGTTGCTAGTTG+GGG | 0.554334 | 6_2:-36435435 | Msa0916400:intron |
GTTGATAGAATTCTACGTCC+TGG | 0.555005 | 6_2:-36434718 | Msa0916400:CDS |
ACTATACCATATTCAGGCCA+TGG | 0.555807 | 6_2:+36435231 | None:intergenic |
TGTGCTTCATGAGTATCCCT+TGG | 0.555852 | 6_2:+36435369 | None:intergenic |
TGTGTATGGTGATCTGGTGT+TGG | 0.556268 | 6_2:-36432103 | Msa0916400:three_prime_UTR |
AAAGTAAAGAGCATAATCAA+TGG | 0.558091 | 6_2:-36432364 | Msa0916400:CDS |
CTTGGAGCAATATATGAAAG+AGG | 0.559920 | 6_2:-36432978 | Msa0916400:CDS |
GAGCGCGTGTGGTCTTCACA+GGG | 0.561613 | 6_2:+36440143 | None:intergenic |
TTTGAGTTGAGTGATGAAGA+TGG | 0.565727 | 6_2:+36440567 | None:intergenic |
CGCTGGAAGAAATATTGGAA+AGG | 0.570543 | 6_2:-36434664 | Msa0916400:CDS |
AGAACAATGTGCCATGTCAA+AGG | 0.573579 | 6_2:+36435266 | None:intergenic |
CCACAAGTAGAGACATGGCT+TGG | 0.575701 | 6_2:-36440004 | Msa0916400:CDS |
CAAAGAAGAAATTTCAGGTG+GGG | 0.578360 | 6_2:-36433276 | Msa0916400:CDS |
AGAATAACCCTGACAAAGCA+TGG | 0.578720 | 6_2:-36434471 | Msa0916400:intron |
AACCCCACCTAGGATTTCAA+AGG | 0.579195 | 6_2:-36433222 | Msa0916400:CDS |
TATGTCGCGTGATAGTAGAT+AGG | 0.582788 | 6_2:+36435410 | None:intergenic |
ATGTGAGAAGAAATCTAAGT+TGG | 0.585176 | 6_2:+36440250 | None:intergenic |
GAAGAAATATTGGAAAGGAT+GGG | 0.586262 | 6_2:-36434659 | Msa0916400:CDS |
AACAAAGAAGAAATTTCAGG+TGG | 0.587726 | 6_2:-36433278 | Msa0916400:CDS |
GCGCGTGTGGTCTTCACAGG+GGG | 0.592206 | 6_2:+36440145 | None:intergenic |
TGTCGTGTTCCAGCACCAAA+CGG | 0.596625 | 6_2:-36440050 | Msa0916400:CDS |
GGGGTGTAGTCAGTTAAAGA+GGG | 0.598561 | 6_2:+36440164 | None:intergenic |
GGAATGGGAGAGTCAAATTG+TGG | 0.598742 | 6_2:-36432338 | Msa0916400:CDS |
CTGCTGTTGATACTGGCTGT+GGG | 0.599695 | 6_2:-36439806 | Msa0916400:CDS |
ATTGTCATTTGAGGCAGGAG+AGG | 0.601191 | 6_2:+36432255 | None:intergenic |
AAATTGTGGACCATGAAGAT+GGG | 0.601433 | 6_2:-36432324 | Msa0916400:CDS |
GATAGGATTCTTAGACCAGA+AGG | 0.608500 | 6_2:-36432424 | Msa0916400:CDS |
TCAAAGGCTCTAGAAGGGAA+AGG | 0.608892 | 6_2:+36435282 | None:intergenic |
GTTACAAGAATCCTTTCCCA+TGG | 0.609267 | 6_2:-36440028 | Msa0916400:CDS |
GATAGAATTCTACGTCCTGG+TGG | 0.611198 | 6_2:-36434715 | Msa0916400:CDS |
CCATGTCAAAGGCTCTAGAA+GGG | 0.611499 | 6_2:+36435277 | None:intergenic |
GCACATACCATGCTTTGTCA+GGG | 0.614775 | 6_2:+36434464 | None:intergenic |
GTATTGAGAAGATGTTGTTG+TGG | 0.625636 | 6_2:+36440199 | None:intergenic |
GTCCCCTTTGAAATCCTAGG+TGG | 0.627138 | 6_2:+36433218 | None:intergenic |
ACAAAGAAGAAATTTCAGGT+GGG | 0.634673 | 6_2:-36433277 | Msa0916400:CDS |
TTGGAGCAATATATGAAAGA+GGG | 0.636053 | 6_2:-36432977 | Msa0916400:CDS |
ATAGAATTCTACGTCCTGGT+GGG | 0.639209 | 6_2:-36434714 | Msa0916400:CDS |
ACAATTAAAATACAAAAGTG+AGG | 0.641655 | 6_2:+36431998 | None:intergenic |
GTATGGTGATCTGGTGTTGG+AGG | 0.645732 | 6_2:-36432100 | Msa0916400:three_prime_UTR |
TAACAGTTTCAATTGCACCA+AGG | 0.657798 | 6_2:-36435386 | Msa0916400:CDS |
TGCTGTTGATACTGGCTGTG+GGG | 0.658528 | 6_2:-36439805 | Msa0916400:intron |
AGCGCGTGTGGTCTTCACAG+GGG | 0.661355 | 6_2:+36440144 | None:intergenic |
GACTAAAATCAACCCCACCT+AGG | 0.665392 | 6_2:-36433232 | Msa0916400:CDS |
ACCTTACCGTCATTTAACGG+TGG | 0.667967 | 6_2:-36439970 | Msa0916400:CDS |
GGAAACATAGTACCACCACC+AGG | 0.673211 | 6_2:+36439897 | None:intergenic |
ATGGCCCACAAGTAGAGACA+TGG | 0.675055 | 6_2:-36440009 | Msa0916400:CDS |
GGGTGTAGTCAGTTAAAGAG+GGG | 0.680490 | 6_2:+36440165 | None:intergenic |
CACACACACAATCTTCACCA+TGG | 0.680736 | 6_2:-36440516 | Msa0916400:exon |
GGTGTAGTCAGTTAAAGAGG+GGG | 0.681930 | 6_2:+36440166 | None:intergenic |
GATAGAATCCAATACCCACC+AGG | 0.684534 | 6_2:+36434700 | None:intergenic |
AGTGGAGGTACCATTTGCCA+TGG | 0.699271 | 6_2:+36440499 | None:intergenic |
CCCCACCTAGGATTTCAAAG+GGG | 0.775769 | 6_2:-36433220 | Msa0916400:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTATTAGATTAACTAA+TGG | - | chr6_2:36435308-36435327 | Msa0916400:CDS | 10.0% |
!!! | ATGAATGAATAATTATTTTA+TGG | + | chr6_2:36435617-36435636 | None:intergenic | 10.0% |
!!! | TTAATGTTATTTTTTTAATG+GGG | + | chr6_2:36436848-36436867 | None:intergenic | 10.0% |
!!! | CTTTAATGTTATTTTTTTAA+TGG | + | chr6_2:36436850-36436869 | None:intergenic | 10.0% |
!!! | GTATTTAAACATTTTTAAAA+AGG | + | chr6_2:36437402-36437421 | None:intergenic | 10.0% |
!! | TATAAAAGAATAAAAGTAAT+TGG | + | chr6_2:36438841-36438860 | None:intergenic | 10.0% |
!!! | TTTGATGATTTTTTTTTTAA+AGG | - | chr6_2:36439666-36439685 | Msa0916400:intron | 10.0% |
!!! | TTGATGATTTTTTTTTTAAA+GGG | - | chr6_2:36439667-36439686 | Msa0916400:intron | 10.0% |
!!! | TATTTTAATTGTTACTTTTT+GGG | - | chr6_2:36440576-36440595 | Msa0916400:five_prime_UTR | 10.0% |
!!! | TTTTTGGATTTTGATTTTTT+TGG | + | chr6_2:36432269-36432288 | None:intergenic | 15.0% |
!!! | ATAAGTATATTGATGATATT+GGG | - | chr6_2:36432700-36432719 | Msa0916400:intron | 15.0% |
!!! | GATATATACTTTTACATTAA+CGG | + | chr6_2:36432875-36432894 | None:intergenic | 15.0% |
!! | AAGATATTAAAAGAACTTAA+TGG | + | chr6_2:36433340-36433359 | None:intergenic | 15.0% |
!!! | ACGTTGATTATTAATTAATA+GGG | + | chr6_2:36433978-36433997 | None:intergenic | 15.0% |
!! | TATTAATTAATAATCAACGT+CGG | - | chr6_2:36433978-36433997 | Msa0916400:intron | 15.0% |
!!! | ATAAGAATGAATATTGTTTT+GGG | - | chr6_2:36434164-36434183 | Msa0916400:intron | 15.0% |
!! | TTTCATTCATCAAATAATTA+CGG | - | chr6_2:36434248-36434267 | Msa0916400:intron | 15.0% |
!!! | TTCTAGATTTTTTTTATAAG+AGG | - | chr6_2:36434534-36434553 | Msa0916400:CDS | 15.0% |
!!! | ATTTTGGGATATATTATAAT+GGG | - | chr6_2:36434715-36434734 | Msa0916400:CDS | 15.0% |
!!! | CAATTTAAGTTTTTAATGAA+TGG | - | chr6_2:36434780-36434799 | Msa0916400:intron | 15.0% |
!! | ATATGAACATAAAATGATTA+TGG | - | chr6_2:36434958-36434977 | Msa0916400:intron | 15.0% |
!!! | TTATGGAATTCTTTTTTTTT+TGG | + | chr6_2:36435600-36435619 | None:intergenic | 15.0% |
!! | TATAGTCAATGTATATATAT+GGG | + | chr6_2:36436289-36436308 | None:intergenic | 15.0% |
!! | ATATAGTCAATGTATATATA+TGG | + | chr6_2:36436290-36436309 | None:intergenic | 15.0% |
!! | AATATAAAAATTAACCATCA+CGG | - | chr6_2:36436997-36437016 | Msa0916400:intron | 15.0% |
!!! | TTTTCTTTTGATGAATTTTT+TGG | + | chr6_2:36437372-36437391 | None:intergenic | 15.0% |
!! | TTTATATAATCCATATTTCA+AGG | + | chr6_2:36437487-36437506 | None:intergenic | 15.0% |
!! | ACAAATAATATGCAATAATT+TGG | + | chr6_2:36438230-36438249 | None:intergenic | 15.0% |
!!! | TATTTTCTCATTTTTTTTAG+AGG | - | chr6_2:36438366-36438385 | Msa0916400:intron | 15.0% |
!!! | TATTTTCTCATATTTTCTTA+TGG | - | chr6_2:36438391-36438410 | Msa0916400:intron | 15.0% |
!!! | ATTTTCTTATGGTAAAAAAA+TGG | - | chr6_2:36438402-36438421 | Msa0916400:intron | 15.0% |
!!! | TATGTTTTTCATTTAGTATA+AGG | - | chr6_2:36438859-36438878 | Msa0916400:intron | 15.0% |
!!! | ATGTTTGTACTTATTTTTAT+TGG | - | chr6_2:36439206-36439225 | Msa0916400:intron | 15.0% |
!! | ATAATTCTTATATTGTGATT+TGG | + | chr6_2:36440040-36440059 | None:intergenic | 15.0% |
!!! | GATATAAAAATTGTGTTTTT+CGG | - | chr6_2:36440436-36440455 | Msa0916400:CDS | 15.0% |
!!! | GTATTTTAATTGTTACTTTT+TGG | - | chr6_2:36440575-36440594 | Msa0916400:five_prime_UTR | 15.0% |
!!! | TTTAAGATTTCATGTTTCTT+AGG | + | chr6_2:36432492-36432511 | None:intergenic | 20.0% |
!!! | GATAAGTATATTGATGATAT+TGG | - | chr6_2:36432699-36432718 | Msa0916400:intron | 20.0% |
!!! | TTTTTTCGATTATGTATAGA+TGG | - | chr6_2:36432903-36432922 | Msa0916400:intron | 20.0% |
!!! | TTTTATCTTGGTTTCAATTA+AGG | + | chr6_2:36433091-36433110 | None:intergenic | 20.0% |
!!! | CATAAGCATTTTTTTTATCT+TGG | + | chr6_2:36433103-36433122 | None:intergenic | 20.0% |
!!! | ATCTTAAGAGTATAGATTAT+AGG | - | chr6_2:36433456-36433475 | Msa0916400:intron | 20.0% |
!! | ATATGTAAGTAAAACAATCT+CGG | - | chr6_2:36433500-36433519 | Msa0916400:intron | 20.0% |
!! | AATTTATCATAGTTTGATGT+CGG | - | chr6_2:36433633-36433652 | Msa0916400:intron | 20.0% |
!!! | ATTTTCAGATATGTAATAGT+TGG | + | chr6_2:36433760-36433779 | None:intergenic | 20.0% |
!!! | ACAAATGGTAGAAATTTTTT+TGG | + | chr6_2:36433880-36433899 | None:intergenic | 20.0% |
!!! | GACGTTGATTATTAATTAAT+AGG | + | chr6_2:36433979-36433998 | None:intergenic | 20.0% |
!!! | TTTTGTTTCCTAAAAAAAAC+TGG | + | chr6_2:36434020-36434039 | None:intergenic | 20.0% |
!! | AAGAATTCAACAAAAAAAGA+CGG | + | chr6_2:36434084-36434103 | None:intergenic | 20.0% |
!!! | GTGACATATTTTACTTTTTT+AGG | - | chr6_2:36434141-36434160 | Msa0916400:intron | 20.0% |
!!! | GATAAGAATGAATATTGTTT+TGG | - | chr6_2:36434163-36434182 | Msa0916400:intron | 20.0% |
!!! | CACTTATATTGCTTTTATTA+AGG | + | chr6_2:36434368-36434387 | None:intergenic | 20.0% |
!!! | ATGTTTTTTCTTTCTTGAAA+GGG | - | chr6_2:36434399-36434418 | Msa0916400:intron | 20.0% |
!!! | TCAAAATTTTTATGAACCTA+AGG | - | chr6_2:36434504-36434523 | Msa0916400:CDS | 20.0% |
!!! | AGATTTTTTTTATAAGAGGA+TGG | - | chr6_2:36434538-36434557 | Msa0916400:CDS | 20.0% |
!! | TATCACTTTCTCTATAAAAT+AGG | - | chr6_2:36434621-36434640 | Msa0916400:CDS | 20.0% |
!!! | ATTTGAAATTATTGAACCTT+AGG | + | chr6_2:36434664-36434683 | None:intergenic | 20.0% |
!! | TTCAATAATTTCAAATTGAG+AGG | - | chr6_2:36434668-36434687 | Msa0916400:CDS | 20.0% |
!!! | GATTTTGGGATATATTATAA+TGG | - | chr6_2:36434714-36434733 | Msa0916400:CDS | 20.0% |
!!! | TTTTGGGATATATTATAATG+GGG | - | chr6_2:36434716-36434735 | Msa0916400:CDS | 20.0% |
!!! | CTTACATTTTTTTTAAGATG+AGG | - | chr6_2:36434828-36434847 | Msa0916400:intron | 20.0% |
!! | GTAAAGAATCTTTATGAAAA+AGG | + | chr6_2:36434902-36434921 | None:intergenic | 20.0% |
!! | TCTTTACGTTAATTAATTCT+TGG | - | chr6_2:36434915-36434934 | Msa0916400:intron | 20.0% |
!! | CTTTACGTTAATTAATTCTT+GGG | - | chr6_2:36434916-36434935 | Msa0916400:intron | 20.0% |
!! | TTAAATCATCTATTATGAGA+CGG | + | chr6_2:36435024-36435043 | None:intergenic | 20.0% |
!!! | TTTTTGATTATATTAGTGAC+CGG | + | chr6_2:36435239-36435258 | None:intergenic | 20.0% |
!!! | TTTTTGATTATATTAGTGAC+CGG | - | chr6_2:36435239-36435258 | Msa0916400:CDS | 20.0% |
!!! | TATTCATACGACTTTTTTTA+AGG | + | chr6_2:36435359-36435378 | None:intergenic | 20.0% |
!!! | TAACATATCTTTTTGAAAGA+AGG | - | chr6_2:36435438-36435457 | Msa0916400:intron | 20.0% |
!!! | GTATTTATTTTGCATTTTAG+CGG | - | chr6_2:36435515-36435534 | Msa0916400:intron | 20.0% |
!! | AATTCTATACTATGGTATTA+TGG | + | chr6_2:36435562-36435581 | None:intergenic | 20.0% |
!!! | TTTTATGGAATTCTATACTA+TGG | + | chr6_2:36435570-36435589 | None:intergenic | 20.0% |
!!! | TTTTTTGGTCAAGTATTTTA+TGG | + | chr6_2:36435585-36435604 | None:intergenic | 20.0% |
!!! | CTATGAAAAATTTCTAGTTT+TGG | - | chr6_2:36435786-36435805 | Msa0916400:intron | 20.0% |
!!! | TTCATTTCCTTTTTCTTTTT+GGG | + | chr6_2:36435851-36435870 | None:intergenic | 20.0% |
!!! | ATTCATTTCCTTTTTCTTTT+TGG | + | chr6_2:36435852-36435871 | None:intergenic | 20.0% |
!! | AAATTTCAAAAGATCTGATT+TGG | - | chr6_2:36436200-36436219 | Msa0916400:intron | 20.0% |
!!! | ATATATACATTGACTATATC+TGG | - | chr6_2:36436291-36436310 | Msa0916400:intron | 20.0% |
!!! | TATATACATTGACTATATCT+GGG | - | chr6_2:36436292-36436311 | Msa0916400:intron | 20.0% |
!! | GTACAATAATAAACTAAGTT+GGG | + | chr6_2:36436464-36436483 | None:intergenic | 20.0% |
!! | TGTACAATAATAAACTAAGT+TGG | + | chr6_2:36436465-36436484 | None:intergenic | 20.0% |
!!! | TTCTTGATAGCTTTAAAAAT+AGG | - | chr6_2:36436568-36436587 | Msa0916400:intron | 20.0% |
!!! | GAATATGTGTAACATTATTT+TGG | - | chr6_2:36437460-36437479 | Msa0916400:intron | 20.0% |
!! | AGCATAATTCATACTTTAAA+AGG | - | chr6_2:36437676-36437695 | Msa0916400:intron | 20.0% |
!!! | TTTTACTTTGTTGAATTAGA+TGG | - | chr6_2:36437806-36437825 | Msa0916400:intron | 20.0% |
!!! | TTGCAATCTAAATGATTTTT+GGG | + | chr6_2:36438040-36438059 | None:intergenic | 20.0% |
!!! | TTTGCAATCTAAATGATTTT+TGG | + | chr6_2:36438041-36438060 | None:intergenic | 20.0% |
!! | TAAGAGATTCAATAGAAAAA+TGG | + | chr6_2:36438126-36438145 | None:intergenic | 20.0% |
!! | ATAATATGCAATAATTTGGA+AGG | + | chr6_2:36438226-36438245 | None:intergenic | 20.0% |
!!! | TTTCCATTTTATTTAGGAAA+TGG | + | chr6_2:36438588-36438607 | None:intergenic | 20.0% |
!!! | TTGACATTTCCATTTTATTT+AGG | + | chr6_2:36438594-36438613 | None:intergenic | 20.0% |
!!! | TTTTTCAAGGTAAAATAAGT+GGG | + | chr6_2:36438751-36438770 | None:intergenic | 20.0% |
!! | AAAAGTAATTGGATAAAGAA+AGG | + | chr6_2:36438830-36438849 | None:intergenic | 20.0% |
!! | TGAATTCTATATATATTGCT+TGG | + | chr6_2:36439010-36439029 | None:intergenic | 20.0% |
!! | ACATGAAAAAAGGATTTAAT+TGG | + | chr6_2:36439190-36439209 | None:intergenic | 20.0% |
!! | ATAAGTACAAACATGAAAAA+AGG | + | chr6_2:36439200-36439219 | None:intergenic | 20.0% |
!!! | TATTTTTATTGGTCACTTTT+AGG | - | chr6_2:36439217-36439236 | Msa0916400:intron | 20.0% |
!! | AAAAAAGTTAACAATCAACT+TGG | - | chr6_2:36439438-36439457 | Msa0916400:intron | 20.0% |
!!! | ACTTGTTAAATATCCTATTT+GGG | - | chr6_2:36439524-36439543 | Msa0916400:intron | 20.0% |
!!! | GATTTTTTTTTTAAAGGGTT+TGG | - | chr6_2:36439672-36439691 | Msa0916400:intron | 20.0% |
!!! | ATTTGACTTTATAATCTGAA+GGG | + | chr6_2:36439897-36439916 | None:intergenic | 20.0% |
!!! | AATTTGACTTTATAATCTGA+AGG | + | chr6_2:36439898-36439917 | None:intergenic | 20.0% |
!! | GACAATGTATTTAACTAATA+AGG | + | chr6_2:36440503-36440522 | None:intergenic | 20.0% |
!! | TTAAATACATTGTCTATTAG+AGG | - | chr6_2:36440509-36440528 | Msa0916400:exon | 20.0% |
!! | ACAATTAAAATACAAAAGTG+AGG | + | chr6_2:36440568-36440587 | None:intergenic | 20.0% |
!!! | TGTTTTTTTGCAGTTGAAAA+AGG | + | chr6_2:36432124-36432143 | None:intergenic | 25.0% |
!!! | TGCATCATTTCATACTTTTT+AGG | - | chr6_2:36432171-36432190 | Msa0916400:three_prime_UTR | 25.0% |
!!! | TGATTTTTTTGGAGACATTT+TGG | + | chr6_2:36432258-36432277 | None:intergenic | 25.0% |
!!! | GTTTTTGTGTTTGTTGTTTT+TGG | + | chr6_2:36432285-36432304 | None:intergenic | 25.0% |
!! | AAGTTGATTAATCTTGAAGA+TGG | - | chr6_2:36432723-36432742 | Msa0916400:intron | 25.0% |
! | TTCGATCAAATAAATGAAGT+TGG | + | chr6_2:36433163-36433182 | None:intergenic | 25.0% |
!! | ATTTAGGAGTTAATGTTTTG+AGG | - | chr6_2:36433288-36433307 | Msa0916400:CDS | 25.0% |
!!! | TTTAGGAGTTAATGTTTTGA+GGG | - | chr6_2:36433289-36433308 | Msa0916400:CDS | 25.0% |
!!! | ATGTTTTGAGGGTATATAAT+AGG | - | chr6_2:36433300-36433319 | Msa0916400:CDS | 25.0% |
! | TATAATAGGAGTTAATGAGA+TGG | - | chr6_2:36433314-36433333 | Msa0916400:CDS | 25.0% |
! | AGATTATAGGAAAAGATGTA+AGG | - | chr6_2:36433469-36433488 | Msa0916400:intron | 25.0% |
!!! | TGAAAATTTGAGTTGAAAGA+TGG | - | chr6_2:36433773-36433792 | Msa0916400:intron | 25.0% |
! | CATCAACTAAAAGTAACAAA+TGG | + | chr6_2:36433895-36433914 | None:intergenic | 25.0% |
! | AACACAATGAATGTAAAAAC+AGG | + | chr6_2:36433929-36433948 | None:intergenic | 25.0% |
!!! | TATTGCTACCAGTTTTTTTT+AGG | - | chr6_2:36434009-36434028 | Msa0916400:intron | 25.0% |
! | AGAATTCAACAAAAAAAGAC+GGG | + | chr6_2:36434083-36434102 | None:intergenic | 25.0% |
!!! | GATGTTTTTTCTTTCTTGAA+AGG | - | chr6_2:36434398-36434417 | Msa0916400:intron | 25.0% |
! | ACTTTCTTGTAAACTAACTA+AGG | - | chr6_2:36434453-36434472 | Msa0916400:intron | 25.0% |
! | AATCTAGAAAAACTTTCCTT+AGG | + | chr6_2:36434523-36434542 | None:intergenic | 25.0% |
! | TGACTAGTAGAAAATTATTG+AGG | + | chr6_2:36434762-36434781 | None:intergenic | 25.0% |
! | TATGAAAAAGGAATCATTAC+TGG | + | chr6_2:36434890-36434909 | None:intergenic | 25.0% |
! | CATATACCAATACATATTTC+TGG | - | chr6_2:36435056-36435075 | Msa0916400:intron | 25.0% |
! | TAAAGACCAGAAATATGTAT+TGG | + | chr6_2:36435065-36435084 | None:intergenic | 25.0% |
!! | CTACTAATTTGATGACTATT+TGG | + | chr6_2:36435273-36435292 | None:intergenic | 25.0% |
!!! | AAGATATGTTACTTTGTTCA+TGG | + | chr6_2:36435429-36435448 | None:intergenic | 25.0% |
!! | CATTTGTCTTCTTTTTATGA+AGG | + | chr6_2:36435655-36435674 | None:intergenic | 25.0% |
! | CTAAATAGGTCAAGTAATAT+GGG | + | chr6_2:36435915-36435934 | None:intergenic | 25.0% |
! | TCTAAATAGGTCAAGTAATA+TGG | + | chr6_2:36435916-36435935 | None:intergenic | 25.0% |
! | ATAGTGCAAATACTCTAAAT+AGG | + | chr6_2:36435929-36435948 | None:intergenic | 25.0% |
!!! | ACTGTGTTACTGTTTTTTTA+AGG | + | chr6_2:36436383-36436402 | None:intergenic | 25.0% |
! | GTGAATTAATAGCCTATAAA+TGG | - | chr6_2:36436434-36436453 | Msa0916400:intron | 25.0% |
! | GCTATCAAGAAAATTAATTG+TGG | + | chr6_2:36436559-36436578 | None:intergenic | 25.0% |
! | AAAAATAGGAAAATGCTAAC+CGG | - | chr6_2:36436582-36436601 | Msa0916400:intron | 25.0% |
!! | TCAAAAACAGTTTCCTTTTA+TGG | - | chr6_2:36436692-36436711 | Msa0916400:intron | 25.0% |
! | AAGGGAATTATTACCATAAA+AGG | + | chr6_2:36436708-36436727 | None:intergenic | 25.0% |
! | TATTAAAATCAAATCCGTGA+TGG | + | chr6_2:36437014-36437033 | None:intergenic | 25.0% |
!!! | ACGGATTTGATTTTAATAGA+AGG | - | chr6_2:36437016-36437035 | Msa0916400:intron | 25.0% |
!!! | CGGATTTGATTTTAATAGAA+GGG | - | chr6_2:36437017-36437036 | Msa0916400:intron | 25.0% |
!!! | GGATTTGATTTTAATAGAAG+GGG | - | chr6_2:36437018-36437037 | Msa0916400:intron | 25.0% |
!! | AAAACATTGATTATGTATGC+AGG | - | chr6_2:36437115-36437134 | Msa0916400:intron | 25.0% |
! | AATAGTACTATACCATATTC+AGG | + | chr6_2:36437341-36437360 | None:intergenic | 25.0% |
! | AATGTTACACATATTCTTAG+AGG | + | chr6_2:36437456-36437475 | None:intergenic | 25.0% |
!!! | TTATTTTGGTCCTTGAAATA+TGG | - | chr6_2:36437474-36437493 | Msa0916400:intron | 25.0% |
!! | TTTAGCTACATTCTCAATTT+TGG | + | chr6_2:36437963-36437982 | None:intergenic | 25.0% |
! | ATTGCAAATTCACTCAAAAT+AGG | - | chr6_2:36438053-36438072 | Msa0916400:intron | 25.0% |
! | TGTTTAGATGTTATTGAAGT+TGG | - | chr6_2:36438157-36438176 | Msa0916400:intron | 25.0% |
! | TATTTGTGCATAGAAATCTA+TGG | - | chr6_2:36438243-36438262 | Msa0916400:intron | 25.0% |
! | GAATATTAGAGATGTGAAAA+AGG | - | chr6_2:36438318-36438337 | Msa0916400:intron | 25.0% |
! | TCAAATCATAATCAGTTGAT+AGG | - | chr6_2:36438489-36438508 | Msa0916400:intron | 25.0% |
!! | CAAATCATAATCAGTTGATA+GGG | - | chr6_2:36438490-36438509 | Msa0916400:intron | 25.0% |
!!! | ATTTTATTTAGGAAATGGAG+AGG | + | chr6_2:36438583-36438602 | None:intergenic | 25.0% |
! | TCTCCATTTCCTAAATAAAA+TGG | - | chr6_2:36438582-36438601 | Msa0916400:intron | 25.0% |
! | ACATTTATACACCAAAACTT+TGG | - | chr6_2:36438682-36438701 | Msa0916400:intron | 25.0% |
!! | TTGTTCTATTACCAAAGTTT+TGG | + | chr6_2:36438696-36438715 | None:intergenic | 25.0% |
!! | AACTTTGGTAATAGAACAAA+TGG | - | chr6_2:36438697-36438716 | Msa0916400:intron | 25.0% |
!!! | CTTTTTCAAGGTAAAATAAG+TGG | + | chr6_2:36438752-36438771 | None:intergenic | 25.0% |
!!! | TTTTTTTTCCAGTAGTTTAG+TGG | + | chr6_2:36438786-36438805 | None:intergenic | 25.0% |
! | ACTACTGGAAAAAAAAACTT+TGG | - | chr6_2:36438790-36438809 | Msa0916400:intron | 25.0% |
! | ATGCAATATCTTTATCACTA+AGG | + | chr6_2:36438909-36438928 | None:intergenic | 25.0% |
! | GAGAATTTACAGATAACAAA+TGG | + | chr6_2:36439084-36439103 | None:intergenic | 25.0% |
!!! | TTGATTAGTTGGTTTGAAAT+TGG | + | chr6_2:36439108-36439127 | None:intergenic | 25.0% |
!!! | GTTTGTTATACTTGATTAGT+TGG | + | chr6_2:36439119-36439138 | None:intergenic | 25.0% |
! | AATAAGCATTCATGTCTAAT+AGG | + | chr6_2:36439485-36439504 | None:intergenic | 25.0% |
! | ATTAGACATGAATGCTTATT+TGG | - | chr6_2:36439485-36439504 | Msa0916400:intron | 25.0% |
! | TTAGACATGAATGCTTATTT+GGG | - | chr6_2:36439486-36439505 | Msa0916400:intron | 25.0% |
!! | CACTTGTTAAATATCCTATT+TGG | - | chr6_2:36439523-36439542 | Msa0916400:intron | 25.0% |
! | TGATTGGAATGTATCATAAT+TGG | - | chr6_2:36439610-36439629 | Msa0916400:intron | 25.0% |
!!! | TTGGATTTTAATTGTTTTGC+AGG | - | chr6_2:36439691-36439710 | Msa0916400:intron | 25.0% |
! | ATGTATACCTGTCATTATAA+AGG | + | chr6_2:36439779-36439798 | None:intergenic | 25.0% |
!!! | TATATTGTGATTTGGTTGAA+TGG | + | chr6_2:36440032-36440051 | None:intergenic | 25.0% |
! | TAGAGATGATGTTGATATAT+TGG | - | chr6_2:36440174-36440193 | Msa0916400:CDS | 25.0% |
!! | AAAGTAAAGAGCATAATCAA+TGG | - | chr6_2:36440199-36440218 | Msa0916400:CDS | 25.0% |
!!! | TATTTGCTGTGAAGAAATAT+TGG | - | chr6_2:36440284-36440303 | Msa0916400:CDS | 25.0% |
!! | CTAAATAGTATTGTCATTTG+AGG | + | chr6_2:36440320-36440339 | None:intergenic | 25.0% |
! | CTCAAATGACAATACTATTT+AGG | - | chr6_2:36440318-36440337 | Msa0916400:CDS | 25.0% |
! | TTAAAATACAAAAGTGAGGA+AGG | + | chr6_2:36440564-36440583 | None:intergenic | 25.0% |
! | GTGATGATTATTTGAGTTTG+AGG | + | chr6_2:36431931-36431950 | None:intergenic | 30.0% |
ATTATAGATTGAGAGGAGTT+TGG | + | chr6_2:36431956-36431975 | None:intergenic | 30.0% | |
GTGAGTTATTATAGATTGAG+AGG | + | chr6_2:36431963-36431982 | None:intergenic | 30.0% | |
! | AAAAAGGAAGTGTATTTGGA+GGG | + | chr6_2:36432108-36432127 | None:intergenic | 30.0% |
! | GTTGAAAAAGGAAGTGTATT+TGG | + | chr6_2:36432112-36432131 | None:intergenic | 30.0% |
!! | GATATTTTTGCTAGTTGATG+TGG | + | chr6_2:36432217-36432236 | None:intergenic | 30.0% |
!!! | TTGGTGTGACTTTTTTGATT+TGG | + | chr6_2:36432239-36432258 | None:intergenic | 30.0% |
ATGTGAGAAGAAATCTAAGT+TGG | + | chr6_2:36432316-36432335 | None:intergenic | 30.0% | |
ATATACTTATCAGCACCATT+AGG | + | chr6_2:36432690-36432709 | None:intergenic | 30.0% | |
CTAAATCAAAAGACAAGACA+AGG | + | chr6_2:36433274-36433293 | None:intergenic | 30.0% | |
!!! | CTTGTCTTGTCTTTTGATTT+AGG | - | chr6_2:36433272-36433291 | Msa0916400:CDS | 30.0% |
! | TTGATTTACAAGAGTGCAAA+TGG | - | chr6_2:36433691-36433710 | Msa0916400:intron | 30.0% |
TAATCTTTGTCGAAAACTTG+TGG | + | chr6_2:36433816-36433835 | None:intergenic | 30.0% | |
GAATTCAACAAAAAAAGACG+GGG | + | chr6_2:36434082-36434101 | None:intergenic | 30.0% | |
TTTGCTTTCACATACATCTA+AGG | - | chr6_2:36434203-36434222 | Msa0916400:intron | 30.0% | |
! | ATTTTCTTGAGATGAACCTA+AGG | - | chr6_2:36434561-36434580 | Msa0916400:CDS | 30.0% |
ATATGATAGAAACCTTCCTT+AGG | + | chr6_2:36434580-36434599 | None:intergenic | 30.0% | |
CAACGATTTACATTTGTCAT+GGG | + | chr6_2:36434807-36434826 | None:intergenic | 30.0% | |
ACAACGATTTACATTTGTCA+TGG | + | chr6_2:36434808-36434827 | None:intergenic | 30.0% | |
!! | TATGTTACTTTGTTCATGGA+TGG | + | chr6_2:36435425-36435444 | None:intergenic | 30.0% |
AATGTTAACATGTGCCATAA+TGG | - | chr6_2:36435671-36435690 | Msa0916400:intron | 30.0% | |
TTCCTTAACATATGCCATTA+TGG | + | chr6_2:36435688-36435707 | None:intergenic | 30.0% | |
!! | ATTTCTTAACTTGTGCCTTA+AGG | - | chr6_2:36435809-36435828 | Msa0916400:intron | 30.0% |
!! | TTTCTTAACTTGTGCCTTAA+GGG | - | chr6_2:36435810-36435829 | Msa0916400:intron | 30.0% |
AACAAGACCCAAAAAGAAAA+AGG | - | chr6_2:36435841-36435860 | Msa0916400:intron | 30.0% | |
AGTCAATGTATATATATGGG+TGG | + | chr6_2:36436286-36436305 | None:intergenic | 30.0% | |
TCTGGGTTATATTATATGAG+TGG | - | chr6_2:36436309-36436328 | Msa0916400:intron | 30.0% | |
ATGGTAATAATTCCCTTTCA+TGG | - | chr6_2:36436711-36436730 | Msa0916400:intron | 30.0% | |
! | TGTAATACCAATGATGATGT+TGG | - | chr6_2:36436939-36436958 | Msa0916400:intron | 30.0% |
TAATTCTAACCTATGAAGCA+TGG | - | chr6_2:36437510-36437529 | Msa0916400:intron | 30.0% | |
GAAGAAATATTGGAAAGGAT+GGG | - | chr6_2:36437904-36437923 | Msa0916400:intron | 30.0% | |
! | CCACTATTTTATTCCAACAA+AGG | + | chr6_2:36437988-36438007 | None:intergenic | 30.0% |
CCTTTGTTGGAATAAAATAG+TGG | - | chr6_2:36437985-36438004 | Msa0916400:intron | 30.0% | |
! | TGGAATAAAATAGTGGAGAA+AGG | - | chr6_2:36437992-36438011 | Msa0916400:intron | 30.0% |
! | AGAAAGGTGATATTGCTATT+TGG | - | chr6_2:36438008-36438027 | Msa0916400:intron | 30.0% |
! | GAAGTTGGTTAAAAGATGTT+AGG | - | chr6_2:36438172-36438191 | Msa0916400:intron | 30.0% |
CAAATGGAGAGAACTTAAAA+TGG | - | chr6_2:36438713-36438732 | Msa0916400:intron | 30.0% | |
!!! | GTTGGAAATTCACTTTTTCA+AGG | + | chr6_2:36438764-36438783 | None:intergenic | 30.0% |
! | CCAACATTTGTTAGTTGAAA+GGG | + | chr6_2:36439148-36439167 | None:intergenic | 30.0% |
! | ACCAACATTTGTTAGTTGAA+AGG | + | chr6_2:36439149-36439168 | None:intergenic | 30.0% |
ATTGGTAGAAATTAAGTGTG+AGG | + | chr6_2:36439172-36439191 | None:intergenic | 30.0% | |
TCCAACAAAGAAGAAATTTC+AGG | - | chr6_2:36439282-36439301 | Msa0916400:intron | 30.0% | |
ACCTGAAATTTCTTCTTTGT+TGG | + | chr6_2:36439286-36439305 | None:intergenic | 30.0% | |
AACAAAGAAGAAATTTCAGG+TGG | - | chr6_2:36439285-36439304 | Msa0916400:intron | 30.0% | |
! | ACAAAGAAGAAATTTCAGGT+GGG | - | chr6_2:36439286-36439305 | Msa0916400:intron | 30.0% |
!! | TTGTCTTTTGAGAATGTTTG+AGG | + | chr6_2:36439387-36439406 | None:intergenic | 30.0% |
TCTCAAAAGACAATCAACTA+TGG | - | chr6_2:36439394-36439413 | Msa0916400:intron | 30.0% | |
!! | GTATCAACTTTAGCTTGAAT+AGG | + | chr6_2:36439564-36439583 | None:intergenic | 30.0% |
TTGGAGCAATATATGAAAGA+GGG | - | chr6_2:36439586-36439605 | Msa0916400:intron | 30.0% | |
! | ATATATGAAAGAGGGTTGAT+TGG | - | chr6_2:36439594-36439613 | Msa0916400:intron | 30.0% |
TGAATTAGGTCATAAGTTCT+AGG | + | chr6_2:36439738-36439757 | None:intergenic | 30.0% | |
! | TGTTTAGCCTTTATAATGAC+AGG | - | chr6_2:36439769-36439788 | Msa0916400:intron | 30.0% |
TTGTTTATTTGTGAGTTCAG+TGG | + | chr6_2:36439925-36439944 | None:intergenic | 30.0% | |
CTAATTATTACACTTCCTTC+TGG | + | chr6_2:36440157-36440176 | None:intergenic | 30.0% | |
AAAAGTTTCTCTCTTTCAAG+AGG | + | chr6_2:36440265-36440284 | None:intergenic | 30.0% | |
AGCAAATGGAGAAAAAAGTA+GGG | + | chr6_2:36440345-36440364 | None:intergenic | 30.0% | |
AAGCAAATGGAGAAAAAAGT+AGG | + | chr6_2:36440346-36440365 | None:intergenic | 30.0% | |
!! | TAAGACTTGTTAGAAGCAAA+TGG | + | chr6_2:36440359-36440378 | None:intergenic | 30.0% |
!! | TTGAGTTGAGTGATGAAGAT+GGG | + | chr6_2:36431998-36432017 | None:intergenic | 35.0% |
!! | TTTGAGTTGAGTGATGAAGA+TGG | + | chr6_2:36431999-36432018 | None:intergenic | 35.0% |
! | GAAAAAGGAAGTGTATTTGG+AGG | + | chr6_2:36432109-36432128 | None:intergenic | 35.0% |
!! | ATTTTTGCTAGTTGATGTGG+AGG | + | chr6_2:36432214-36432233 | None:intergenic | 35.0% |
GTATTGAGAAGATGTTGTTG+TGG | + | chr6_2:36432367-36432386 | None:intergenic | 35.0% | |
AAAGGATTCTTGTAACCGTT+TGG | + | chr6_2:36432531-36432550 | None:intergenic | 35.0% | |
TGTACCTTACCGTCATTTAA+CGG | - | chr6_2:36432590-36432609 | Msa0916400:intron | 35.0% | |
! | CTTTTTCCACCGTTAAATGA+CGG | + | chr6_2:36432602-36432621 | None:intergenic | 35.0% |
TGGAAAAAGCTGGTCAAAAT+TGG | - | chr6_2:36432613-36432632 | Msa0916400:intron | 35.0% | |
! | CAAAATTGGATCCGTTTTGA+CGG | - | chr6_2:36432627-36432646 | Msa0916400:intron | 35.0% |
! | CATCATGAAGCACTCTTATA+CGG | - | chr6_2:36432813-36432832 | Msa0916400:CDS | 35.0% |
AGGTAGTAACACATATGGTT+AGG | + | chr6_2:36433367-36433386 | None:intergenic | 35.0% | |
GATGAAGGTAGTAACACATA+TGG | + | chr6_2:36433372-36433391 | None:intergenic | 35.0% | |
GATACTATGCTTAAGGATGA+AGG | + | chr6_2:36433387-36433406 | None:intergenic | 35.0% | |
TCAATGGGATACTATGCTTA+AGG | + | chr6_2:36433394-36433413 | None:intergenic | 35.0% | |
TCCATCAACTCACATTCAAT+GGG | + | chr6_2:36433409-36433428 | None:intergenic | 35.0% | |
!! | TTTTCGACAAAGATTAGTCG+TGG | - | chr6_2:36433820-36433839 | Msa0916400:intron | 35.0% |
TTTCAAATTGAGAGGTCGTT+TGG | - | chr6_2:36434676-36434695 | Msa0916400:CDS | 35.0% | |
! | TTGTCATGGGGTAAGATTTT+GGG | - | chr6_2:36434700-36434719 | Msa0916400:CDS | 35.0% |
CAGTCGTTGTCTTACATAAT+AGG | - | chr6_2:36434851-36434870 | Msa0916400:intron | 35.0% | |
TAATTCTTGGGTACTTTCAG+TGG | - | chr6_2:36434928-36434947 | Msa0916400:intron | 35.0% | |
AATTCTTGGGTACTTTCAGT+GGG | - | chr6_2:36434929-36434948 | Msa0916400:intron | 35.0% | |
ATCATCTATTATGAGACGGA+GGG | + | chr6_2:36435020-36435039 | None:intergenic | 35.0% | |
AATCATCTATTATGAGACGG+AGG | + | chr6_2:36435021-36435040 | None:intergenic | 35.0% | |
TGATTATATTAGTGACCGGA+GGG | + | chr6_2:36435243-36435262 | None:intergenic | 35.0% | |
TTGATTATATTAGTGACCGG+AGG | + | chr6_2:36435242-36435261 | None:intergenic | 35.0% | |
TTGATTATATTAGTGACCGG+AGG | - | chr6_2:36435242-36435261 | Msa0916400:CDS | 35.0% | |
TGATTATATTAGTGACCGGA+GGG | - | chr6_2:36435243-36435262 | Msa0916400:CDS | 35.0% | |
AGTCGTATGAATATGATGCA+TGG | - | chr6_2:36435366-36435385 | Msa0916400:CDS | 35.0% | |
ATGGATCTTAGCGAATTTCT+AGG | + | chr6_2:36435543-36435562 | None:intergenic | 35.0% | |
TGCCATAATGGCATATGTTA+AGG | - | chr6_2:36435683-36435702 | Msa0916400:intron | 35.0% | |
AAAAGGACAAATTGTCGTGA+TGG | + | chr6_2:36435876-36435895 | None:intergenic | 35.0% | |
ATAGGTCAAGTAATATGGGA+CGG | + | chr6_2:36435911-36435930 | None:intergenic | 35.0% | |
TCAACTGGGTCAAGTAATAT+GGG | - | chr6_2:36436128-36436147 | Msa0916400:intron | 35.0% | |
! | AAGTTGGGTATGCCATTTAT+AGG | + | chr6_2:36436449-36436468 | None:intergenic | 35.0% |
! | CGAAACTTTTCTCAAATCAG+AGG | - | chr6_2:36436526-36436545 | Msa0916400:intron | 35.0% |
TGGTTAAGCATACCATGAAA+GGG | + | chr6_2:36436726-36436745 | None:intergenic | 35.0% | |
ACATGTTGAGCAACATTGTA+GGG | + | chr6_2:36436922-36436941 | None:intergenic | 35.0% | |
TACATGTTGAGCAACATTGT+AGG | + | chr6_2:36436923-36436942 | None:intergenic | 35.0% | |
TCATCAACCAACATCATCAT+TGG | + | chr6_2:36436949-36436968 | None:intergenic | 35.0% | |
TAACAGTTTCAATTGCACCA+AGG | - | chr6_2:36437177-36437196 | Msa0916400:intron | 35.0% | |
AACAGTTTCAATTGCACCAA+GGG | - | chr6_2:36437178-36437197 | Msa0916400:intron | 35.0% | |
! | GTTCAATTTGCTCTTGAAAG+AGG | - | chr6_2:36437218-36437237 | Msa0916400:intron | 35.0% |
CAATATTTCTTCCAGCGAAT+TGG | + | chr6_2:36437896-36437915 | None:intergenic | 35.0% | |
CAATTCGCTGGAAGAAATAT+TGG | - | chr6_2:36437894-36437913 | Msa0916400:intron | 35.0% | |
GGAAGAAATATTGGAAAGGA+TGG | - | chr6_2:36437903-36437922 | Msa0916400:intron | 35.0% | |
ATGTAGCTAAAAGCCTTTGT+TGG | - | chr6_2:36437972-36437991 | Msa0916400:intron | 35.0% | |
TTATTCTGCTCTTGGCAAAA+AGG | + | chr6_2:36438079-36438098 | None:intergenic | 35.0% | |
! | GTTACATTAGATGCCATTTG+TGG | - | chr6_2:36438194-36438213 | Msa0916400:intron | 35.0% |
TATTGTCATCCAATCAACTC+AGG | - | chr6_2:36438461-36438480 | Msa0916400:intron | 35.0% | |
ATTGTCATCCAATCAACTCA+GGG | - | chr6_2:36438462-36438481 | Msa0916400:intron | 35.0% | |
ATCTTCACCCTAAATAAGTG+GGG | + | chr6_2:36438560-36438579 | None:intergenic | 35.0% | |
GATCTTCACCCTAAATAAGT+GGG | + | chr6_2:36438561-36438580 | None:intergenic | 35.0% | |
ATTTCCAACCACTAAACTAC+TGG | - | chr6_2:36438775-36438794 | Msa0916400:intron | 35.0% | |
! | TTTTCCAGTAGTTTAGTGGT+TGG | + | chr6_2:36438782-36438801 | None:intergenic | 35.0% |
TTGTTAGTTGAAAGGGACTA+GGG | + | chr6_2:36439141-36439160 | None:intergenic | 35.0% | |
TTTGTTAGTTGAAAGGGACT+AGG | + | chr6_2:36439142-36439161 | None:intergenic | 35.0% | |
CCCTTTCAACTAACAAATGT+TGG | - | chr6_2:36439145-36439164 | Msa0916400:intron | 35.0% | |
CTTCTTTGTTGGACACTTTA+GGG | + | chr6_2:36439275-36439294 | None:intergenic | 35.0% | |
TCTTCTTTGTTGGACACTTT+AGG | + | chr6_2:36439276-36439295 | None:intergenic | 35.0% | |
! | CAAAGAAGAAATTTCAGGTG+GGG | - | chr6_2:36439287-36439306 | Msa0916400:intron | 35.0% |
CAGGTGGGGAATTAAATAAT+TGG | - | chr6_2:36439301-36439320 | Msa0916400:intron | 35.0% | |
ATTTCAAAGGGGACCATTAA+AGG | - | chr6_2:36439354-36439373 | Msa0916400:intron | 35.0% | |
AACAATCAACTTGGAAAAGC+TGG | - | chr6_2:36439447-36439466 | Msa0916400:intron | 35.0% | |
! | TCCTATTTGGGTTATGAATG+TGG | - | chr6_2:36439536-36439555 | Msa0916400:intron | 35.0% |
ACCACATTCATAACCCAAAT+AGG | + | chr6_2:36439540-36439559 | None:intergenic | 35.0% | |
!! | CAAGCTAAAGTTGATACACT+TGG | - | chr6_2:36439567-36439586 | Msa0916400:intron | 35.0% |
CTTGGAGCAATATATGAAAG+AGG | - | chr6_2:36439585-36439604 | Msa0916400:intron | 35.0% | |
ACACAGAATCAGCATGAATT+AGG | + | chr6_2:36439752-36439771 | None:intergenic | 35.0% | |
! | TTGTTAAAAGTGTGTGTTGC+TGG | + | chr6_2:36440064-36440083 | None:intergenic | 35.0% |
TCTGCTTTGTAGATGTGAAT+TGG | - | chr6_2:36440096-36440115 | Msa0916400:CDS | 35.0% | |
ACATATTGCTAGAGATGGAT+AGG | - | chr6_2:36440122-36440141 | Msa0916400:CDS | 35.0% | |
! | AAAGAGCATAATCAATGGCT+TGG | - | chr6_2:36440204-36440223 | Msa0916400:CDS | 35.0% |
! | CATAATCAATGGCTTGGAAT+GGG | - | chr6_2:36440210-36440229 | Msa0916400:CDS | 35.0% |
AAATTGTGGACCATGAAGAT+GGG | - | chr6_2:36440239-36440258 | Msa0916400:CDS | 35.0% | |
! | ATAGTATTGTCATTTGAGGC+AGG | + | chr6_2:36440316-36440335 | None:intergenic | 35.0% |
TTCGAACGACATAAGTTGTT+CGG | - | chr6_2:36440397-36440416 | Msa0916400:CDS | 35.0% | |
!! | TTGTGTTTTTCGGATGTGTA+TGG | - | chr6_2:36440446-36440465 | Msa0916400:CDS | 35.0% |
AATACAAAAGTGAGGAAGGA+AGG | + | chr6_2:36440560-36440579 | None:intergenic | 35.0% | |
TGCAAGCAAACTTTGTTGAA+TGG | - | chr6_2:36440603-36440622 | Msa0916400:five_prime_UTR | 35.0% | |
ATAGATTGAGAGGAGTTTGG+TGG | + | chr6_2:36431953-36431972 | None:intergenic | 40.0% | |
! | TTGAGTGATGAAGATGGGTT+TGG | + | chr6_2:36431993-36432012 | None:intergenic | 40.0% |
ACAATCTTCACCATGGCAAA+TGG | - | chr6_2:36432054-36432073 | Msa0916400:three_prime_UTR | 40.0% | |
!! | TTTGAAGGGTTTTGGTGAAG+TGG | + | chr6_2:36432085-36432104 | None:intergenic | 40.0% |
GTGTATTTGGAGGGTTTGAA+GGG | + | chr6_2:36432099-36432118 | None:intergenic | 40.0% | |
AGTGTATTTGGAGGGTTTGA+AGG | + | chr6_2:36432100-36432119 | None:intergenic | 40.0% | |
!!! | TTGATGTGGAGGTGTTGTTT+TGG | + | chr6_2:36432203-36432222 | None:intergenic | 40.0% |
AGAAGATGTTGTTGTGGATG+TGG | + | chr6_2:36432361-36432380 | None:intergenic | 40.0% | |
GTTACAAGAATCCTTTCCCA+TGG | - | chr6_2:36432535-36432554 | Msa0916400:intron | 40.0% | |
CATTTAACGGTGGAAAAAGC+TGG | - | chr6_2:36432603-36432622 | Msa0916400:intron | 40.0% | |
GGAACTTATCACCGTCAAAA+CGG | + | chr6_2:36432641-36432660 | None:intergenic | 40.0% | |
GGTGGTACTATGTTTCCTAA+TGG | - | chr6_2:36432672-36432691 | Msa0916400:intron | 40.0% | |
! | TCCCATTGAATGTGAGTTGA+TGG | - | chr6_2:36433405-36433424 | Msa0916400:intron | 40.0% |
CTCCATCAACTCACATTCAA+TGG | + | chr6_2:36433410-36433429 | None:intergenic | 40.0% | |
! | GATGGAGTATTACTCGTAGT+TGG | - | chr6_2:36433423-36433442 | Msa0916400:intron | 40.0% |
CATAGTTTGATGTCGGAAGT+AGG | - | chr6_2:36433640-36433659 | Msa0916400:intron | 40.0% | |
TCTTGAGATGAACCTAAGGA+AGG | - | chr6_2:36434565-36434584 | Msa0916400:CDS | 40.0% | |
TCATATGAACCTAACGAGCA+AGG | - | chr6_2:36434594-36434613 | Msa0916400:CDS | 40.0% | |
TGATAAAGACCTTGCTCGTT+AGG | + | chr6_2:36434606-36434625 | None:intergenic | 40.0% | |
! | CTTGTCATGGGGTAAGATTT+TGG | - | chr6_2:36434699-36434718 | Msa0916400:CDS | 40.0% |
ATTCTTGGGTACTTTCAGTG+GGG | - | chr6_2:36434930-36434949 | Msa0916400:intron | 40.0% | |
TGCCCTTTGATCATCAGTTT+GGG | - | chr6_2:36435399-36435418 | Msa0916400:CDS | 40.0% | |
! | CTTGTTATCTTGTGCCCTTA+AGG | + | chr6_2:36435827-36435846 | None:intergenic | 40.0% |
GTCAACTGGGTCAAGTAATA+TGG | - | chr6_2:36436127-36436146 | Msa0916400:intron | 40.0% | |
AAGTGCATCTACAGTAGGAA+TGG | - | chr6_2:36436226-36436245 | Msa0916400:intron | 40.0% | |
CTGGTTAAGCATACCATGAA+AGG | + | chr6_2:36436727-36436746 | None:intergenic | 40.0% | |
!! | TTTTTAAGGGTCCTGCTAAC+CGG | + | chr6_2:36436762-36436781 | None:intergenic | 40.0% |
! | TGTGCTGCTCACATGATTAA+AGG | - | chr6_2:36436873-36436892 | Msa0916400:intron | 40.0% |
! | GTGCTGCTCACATGATTAAA+GGG | - | chr6_2:36436874-36436893 | Msa0916400:intron | 40.0% |
TATGTATGCAGGTTGCTAGT+TGG | - | chr6_2:36437126-36437145 | Msa0916400:intron | 40.0% | |
ATGTATGCAGGTTGCTAGTT+GGG | - | chr6_2:36437127-36437146 | Msa0916400:intron | 40.0% | |
TATGTCGCGTGATAGTAGAT+AGG | + | chr6_2:36437156-36437175 | None:intergenic | 40.0% | |
!! | AGAGGTGTTCCTGCAATTAT+TGG | - | chr6_2:36437236-36437255 | Msa0916400:intron | 40.0% |
GCAAAGACACCAATAATTGC+AGG | + | chr6_2:36437248-36437267 | None:intergenic | 40.0% | |
AGGGAAAGGTAATCTCTTTG+AGG | + | chr6_2:36437270-36437289 | None:intergenic | 40.0% | |
AGAACAATGTGCCATGTCAA+AGG | + | chr6_2:36437300-36437319 | None:intergenic | 40.0% | |
! | GTTCTCGTTGTCTTATTCCA+TGG | - | chr6_2:36437315-36437334 | Msa0916400:intron | 40.0% |
CTTATTCCATGGCCTGAATA+TGG | - | chr6_2:36437326-36437345 | Msa0916400:intron | 40.0% | |
ACTATACCATATTCAGGCCA+TGG | + | chr6_2:36437335-36437354 | None:intergenic | 40.0% | |
GCACAGACACTTCTAATCAA+AGG | + | chr6_2:36437644-36437663 | None:intergenic | 40.0% | |
! | GTTGATAGAATTCTACGTCC+TGG | - | chr6_2:36437845-36437864 | Msa0916400:intron | 40.0% |
ATAGAATTCTACGTCCTGGT+GGG | - | chr6_2:36437849-36437868 | Msa0916400:intron | 40.0% | |
TATTTCTTCCAGCGAATTGG+TGG | + | chr6_2:36437893-36437912 | None:intergenic | 40.0% | |
CGCTGGAAGAAATATTGGAA+AGG | - | chr6_2:36437899-36437918 | Msa0916400:intron | 40.0% | |
AGAATAACCCTGACAAAGCA+TGG | - | chr6_2:36438092-36438111 | Msa0916400:intron | 40.0% | |
TGGAAGGTAGTTTCCACAAA+TGG | + | chr6_2:36438210-36438229 | None:intergenic | 40.0% | |
!! | TTGATGAACCCTGAGTTGAT+TGG | + | chr6_2:36438473-36438492 | None:intergenic | 40.0% |
GGACATTGCATTATATACGC+AGG | - | chr6_2:36438511-36438530 | Msa0916400:intron | 40.0% | |
TTGCATTATATACGCAGGAG+CGG | - | chr6_2:36438516-36438535 | Msa0916400:intron | 40.0% | |
GGATCTTCACCCTAAATAAG+TGG | + | chr6_2:36438562-36438581 | None:intergenic | 40.0% | |
GGAGAGAACTTAAAATGGAG+AGG | - | chr6_2:36438718-36438737 | Msa0916400:intron | 40.0% | |
!! | GGGGTTGATTTTAGTCTTTG+AGG | + | chr6_2:36439327-36439346 | None:intergenic | 40.0% |
TTGAGGTGTGACACCTTTAA+TGG | + | chr6_2:36439370-36439389 | None:intergenic | 40.0% | |
TTGGAAAAGCTGGTAGATAC+AGG | - | chr6_2:36439457-36439476 | Msa0916400:intron | 40.0% | |
GACATGAATGCTTATTTGGG+TGG | - | chr6_2:36439489-36439508 | Msa0916400:intron | 40.0% | |
GGAAGACATATTGCTAGAGA+TGG | - | chr6_2:36440117-36440136 | Msa0916400:CDS | 40.0% | |
GATAGGATTCTTAGACCAGA+AGG | - | chr6_2:36440139-36440158 | Msa0916400:CDS | 40.0% | |
! | GCATAATCAATGGCTTGGAA+TGG | - | chr6_2:36440209-36440228 | Msa0916400:CDS | 40.0% |
CAAATTGTGGACCATGAAGA+TGG | - | chr6_2:36440238-36440257 | Msa0916400:CDS | 40.0% | |
CACACACACAATCTTCACCA+TGG | - | chr6_2:36432047-36432066 | Msa0916400:three_prime_UTR | 45.0% | |
! | TTGGAGGGTTTGAAGGGTTT+TGG | + | chr6_2:36432093-36432112 | None:intergenic | 45.0% |
GTTGTTGTGGATGTGGTTGT+TGG | + | chr6_2:36432354-36432373 | None:intergenic | 45.0% | |
GGTGTAGTCAGTTAAAGAGG+GGG | + | chr6_2:36432400-36432419 | None:intergenic | 45.0% | |
GGGTGTAGTCAGTTAAAGAG+GGG | + | chr6_2:36432401-36432420 | None:intergenic | 45.0% | |
GGGGTGTAGTCAGTTAAAGA+GGG | + | chr6_2:36432402-36432421 | None:intergenic | 45.0% | |
!! | TGTATTTTAAGGAGCGCGTG+TGG | + | chr6_2:36432434-36432453 | None:intergenic | 45.0% |
! | TCTGTCGCGCGTGTATTTTA+AGG | + | chr6_2:36432445-36432464 | None:intergenic | 45.0% |
!! | TTCTTGTAACCGTTTGGTGC+TGG | + | chr6_2:36432525-36432544 | None:intergenic | 45.0% |
CAAGCCATGTCTCTACTTGT+GGG | + | chr6_2:36432561-36432580 | None:intergenic | 45.0% | |
ACCTTACCGTCATTTAACGG+TGG | - | chr6_2:36432593-36432612 | Msa0916400:intron | 45.0% | |
TCCACCGTTAAATGACGGTA+AGG | + | chr6_2:36432597-36432616 | None:intergenic | 45.0% | |
! | GGTGATAAGTTCCGTTTTCC+TGG | - | chr6_2:36432648-36432667 | Msa0916400:intron | 45.0% |
! | GATAAGTTCCGTTTTCCTGG+TGG | - | chr6_2:36432651-36432670 | Msa0916400:intron | 45.0% |
TAGTACCACCACCAGGAAAA+CGG | + | chr6_2:36432662-36432681 | None:intergenic | 45.0% | |
GTGAGAACTGCTGTTGATAC+TGG | - | chr6_2:36432750-36432769 | Msa0916400:intron | 45.0% | |
ACCTGACACACGATACTACA+AGG | - | chr6_2:36432838-36432857 | Msa0916400:CDS | 45.0% | |
TCCTTGTAGTATCGTGTGTC+AGG | + | chr6_2:36432842-36432861 | None:intergenic | 45.0% | |
GTATGAACGTGACTGTCCTA+AGG | - | chr6_2:36434645-36434664 | Msa0916400:CDS | 45.0% | |
GTATTCTGACTTACACCCTC+CGG | - | chr6_2:36435133-36435152 | Msa0916400:intron | 45.0% | |
TGACTATTTGGTACACCCTC+CGG | + | chr6_2:36435261-36435280 | None:intergenic | 45.0% | |
GTGCCCTTTGATCATCAGTT+TGG | - | chr6_2:36435398-36435417 | Msa0916400:CDS | 45.0% | |
GGCCCAAACTGATGATCAAA+GGG | + | chr6_2:36435404-36435423 | None:intergenic | 45.0% | |
TGGCCCAAACTGATGATCAA+AGG | + | chr6_2:36435405-36435424 | None:intergenic | 45.0% | |
GACGGAGGGAGTAAAGAAAA+AGG | + | chr6_2:36435893-36435912 | None:intergenic | 45.0% | |
GTCAAGTAATATGGGACGGA+GGG | + | chr6_2:36436136-36436155 | None:intergenic | 45.0% | |
ACATACGTGACAGAGTCAAC+TGG | - | chr6_2:36436113-36436132 | Msa0916400:intron | 45.0% | |
CATACGTGACAGAGTCAACT+GGG | - | chr6_2:36436114-36436133 | Msa0916400:intron | 45.0% | |
CTGGGTCAAGTAATATGGGA+CGG | - | chr6_2:36436132-36436151 | Msa0916400:intron | 45.0% | |
GTCAAGTAATATGGGACGGA+GGG | - | chr6_2:36436136-36436155 | Msa0916400:intron | 45.0% | |
GGTACAAGTGCATCTACAGT+AGG | - | chr6_2:36436221-36436240 | Msa0916400:intron | 45.0% | |
ATCTACAGTAGGAATGGACC+TGG | - | chr6_2:36436232-36436251 | Msa0916400:intron | 45.0% | |
TATGCTCTTTCCGGGTAATG+CGG | - | chr6_2:36436260-36436279 | Msa0916400:intron | 45.0% | |
GTTGAGCAACATTGTAGGGA+TGG | + | chr6_2:36436918-36436937 | None:intergenic | 45.0% | |
TGTATGCAGGTTGCTAGTTG+GGG | - | chr6_2:36437128-36437147 | Msa0916400:intron | 45.0% | |
TGTGCTTCATGAGTATCCCT+TGG | + | chr6_2:36437197-36437216 | None:intergenic | 45.0% | |
!! | TCAAAGGCTCTAGAAGGGAA+AGG | + | chr6_2:36437284-36437303 | None:intergenic | 45.0% |
!! | CCATGTCAAAGGCTCTAGAA+GGG | + | chr6_2:36437289-36437308 | None:intergenic | 45.0% |
GTCAATGTCTGTGTCTTGTC+TGG | + | chr6_2:36437543-36437562 | None:intergenic | 45.0% | |
GATAGAATTCTACGTCCTGG+TGG | - | chr6_2:36437848-36437867 | Msa0916400:intron | 45.0% | |
GATAGAATCCAATACCCACC+AGG | + | chr6_2:36437866-36437885 | None:intergenic | 45.0% | |
!! | GGTGGGTATTGGATTCTATC+TGG | - | chr6_2:36437866-36437885 | Msa0916400:intron | 45.0% |
TGTCAGGGTTATTCTGCTCT+TGG | + | chr6_2:36438087-36438106 | None:intergenic | 45.0% | |
GCACATACCATGCTTTGTCA+GGG | + | chr6_2:36438102-36438121 | None:intergenic | 45.0% | |
AGCACATACCATGCTTTGTC+AGG | + | chr6_2:36438103-36438122 | None:intergenic | 45.0% | |
TGCATTATATACGCAGGAGC+GGG | - | chr6_2:36438517-36438536 | Msa0916400:intron | 45.0% | |
! | TTGTTGGACACTTTAGGGAG+TGG | + | chr6_2:36439270-36439289 | None:intergenic | 45.0% |
GACTAAAATCAACCCCACCT+AGG | - | chr6_2:36439331-36439350 | Msa0916400:intron | 45.0% | |
AACCCCACCTAGGATTTCAA+AGG | - | chr6_2:36439341-36439360 | Msa0916400:intron | 45.0% | |
ACCCCACCTAGGATTTCAAA+GGG | - | chr6_2:36439342-36439361 | Msa0916400:intron | 45.0% | |
!! | TCCCCTTTGAAATCCTAGGT+GGG | + | chr6_2:36439347-36439366 | None:intergenic | 45.0% |
!! | ATGGTCCCCTTTGAAATCCT+AGG | + | chr6_2:36439351-36439370 | None:intergenic | 45.0% |
GGAATGGGAGAGTCAAATTG+TGG | - | chr6_2:36440225-36440244 | Msa0916400:CDS | 45.0% | |
TTTCAAGAGGCCCATCTTCA+TGG | + | chr6_2:36440252-36440271 | None:intergenic | 45.0% | |
! | ATTGTCATTTGAGGCAGGAG+AGG | + | chr6_2:36440311-36440330 | None:intergenic | 45.0% |
TTCGGATGTGTATGGTGATC+TGG | - | chr6_2:36440454-36440473 | Msa0916400:CDS | 45.0% | |
TGTGTATGGTGATCTGGTGT+TGG | - | chr6_2:36440460-36440479 | Msa0916400:CDS | 45.0% | |
!!! | ATAAAAATTTTGAAAAAATT+AGG | + | chr6_2:36434497-36434516 | None:intergenic | 5.0% |
!!! | ATTGAATATAATATTTTTAA+GGG | + | chr6_2:36436775-36436794 | None:intergenic | 5.0% |
!!! | AATTGAATATAATATTTTTA+AGG | + | chr6_2:36436776-36436795 | None:intergenic | 5.0% |
!!! | TTTAATGTTATTTTTTTAAT+GGG | + | chr6_2:36436849-36436868 | None:intergenic | 5.0% |
!! | AGTGGAGGTACCATTTGCCA+TGG | + | chr6_2:36432067-36432086 | None:intergenic | 50.0% |
!! | GAAGGGTTTTGGTGAAGTGG+AGG | + | chr6_2:36432082-36432101 | None:intergenic | 50.0% |
! | TTAAAGAGGGGGAGCATGGT+GGG | + | chr6_2:36432389-36432408 | None:intergenic | 50.0% |
TCAGTTAAAGAGGGGGAGCA+TGG | + | chr6_2:36432393-36432412 | None:intergenic | 50.0% | |
! | GGGGGTGTAGTCAGTTAAAG+AGG | + | chr6_2:36432403-36432422 | None:intergenic | 50.0% |
! | TCTTAGGACAGTGTCGTTCG+CGG | + | chr6_2:36432476-36432495 | None:intergenic | 50.0% |
TGTCGTGTTCCAGCACCAAA+CGG | - | chr6_2:36432513-36432532 | Msa0916400:intron | 50.0% | |
TGTCTCTACTTGTGGGCCAT+GGG | + | chr6_2:36432554-36432573 | None:intergenic | 50.0% | |
ATGTCTCTACTTGTGGGCCA+TGG | + | chr6_2:36432555-36432574 | None:intergenic | 50.0% | |
ATGGCCCACAAGTAGAGACA+TGG | - | chr6_2:36432554-36432573 | Msa0916400:intron | 50.0% | |
CCAAGCCATGTCTCTACTTG+TGG | + | chr6_2:36432562-36432581 | None:intergenic | 50.0% | |
CCACAAGTAGAGACATGGCT+TGG | - | chr6_2:36432559-36432578 | Msa0916400:intron | 50.0% | |
! | AAGTTCCGTTTTCCTGGTGG+TGG | - | chr6_2:36432654-36432673 | Msa0916400:intron | 50.0% |
GGAAACATAGTACCACCACC+AGG | + | chr6_2:36432669-36432688 | None:intergenic | 50.0% | |
! | ACTGCTGTTGATACTGGCTG+TGG | - | chr6_2:36432756-36432775 | Msa0916400:intron | 50.0% |
! | CTGCTGTTGATACTGGCTGT+GGG | - | chr6_2:36432757-36432776 | Msa0916400:intron | 50.0% |
! | TGCTGTTGATACTGGCTGTG+GGG | - | chr6_2:36432758-36432777 | Msa0916400:intron | 50.0% |
TTGGCTCATACGACTCGTGT+CGG | + | chr6_2:36433144-36433163 | None:intergenic | 50.0% | |
!! | AGAGGTCGTTTGGCTTGTCA+TGG | - | chr6_2:36434686-36434705 | Msa0916400:CDS | 50.0% |
!! | GAGGTCGTTTGGCTTGTCAT+GGG | - | chr6_2:36434687-36434706 | Msa0916400:CDS | 50.0% |
!! | AGGTCGTTTGGCTTGTCATG+GGG | - | chr6_2:36434688-36434707 | Msa0916400:CDS | 50.0% |
GGTCAAGTAATATGGGACGG+AGG | + | chr6_2:36436135-36436154 | None:intergenic | 50.0% | |
GGTCAAGTAATATGGGACGG+AGG | - | chr6_2:36436135-36436154 | Msa0916400:intron | 50.0% | |
CTGGCTAGGTATGCTCTTTC+CGG | - | chr6_2:36436251-36436270 | Msa0916400:intron | 50.0% | |
TGGCTAGGTATGCTCTTTCC+GGG | - | chr6_2:36436252-36436271 | Msa0916400:intron | 50.0% | |
!! | AAAATGCTAACCGGTGCTGC+TGG | - | chr6_2:36436591-36436610 | Msa0916400:intron | 50.0% |
!! | AAATGCTAACCGGTGCTGCT+GGG | - | chr6_2:36436592-36436611 | Msa0916400:intron | 50.0% |
TGGTATGCTTAACCAGTGCC+CGG | - | chr6_2:36436731-36436750 | Msa0916400:intron | 50.0% | |
GGGATGGATCGAATCTCTGA+CGG | + | chr6_2:36436902-36436921 | None:intergenic | 50.0% | |
!! | CCCTTCTAGAGCCTTTGACA+TGG | - | chr6_2:36437286-36437305 | Msa0916400:intron | 50.0% |
!! | GCCATGTCAAAGGCTCTAGA+AGG | + | chr6_2:36437290-36437309 | None:intergenic | 50.0% |
GGTGTCTGTCCATGCTTCAT+AGG | + | chr6_2:36437522-36437541 | None:intergenic | 50.0% | |
! | TTCTACGTCCTGGTGGGTAT+TGG | - | chr6_2:36437855-36437874 | Msa0916400:intron | 50.0% |
TATCTGGTCCACCAATTCGC+TGG | - | chr6_2:36437882-36437901 | Msa0916400:intron | 50.0% | |
GCATTATATACGCAGGAGCG+GGG | - | chr6_2:36438518-36438537 | Msa0916400:intron | 50.0% | |
CATTATATACGCAGGAGCGG+GGG | - | chr6_2:36438519-36438538 | Msa0916400:intron | 50.0% | |
! | CTAAATAAGTGGGGTGTCCG+GGG | + | chr6_2:36438551-36438570 | None:intergenic | 50.0% |
! | CCTAAATAAGTGGGGTGTCC+GGG | + | chr6_2:36438552-36438571 | None:intergenic | 50.0% |
! | CCCTAAATAAGTGGGGTGTC+CGG | + | chr6_2:36438553-36438572 | None:intergenic | 50.0% |
CCGGACACCCCACTTATTTA+GGG | - | chr6_2:36438550-36438569 | Msa0916400:intron | 50.0% | |
!! | CCCCTTTGAAATCCTAGGTG+GGG | + | chr6_2:36439346-36439365 | None:intergenic | 50.0% |
CCCCACCTAGGATTTCAAAG+GGG | - | chr6_2:36439343-36439362 | Msa0916400:intron | 50.0% | |
!! | GTCCCCTTTGAAATCCTAGG+TGG | + | chr6_2:36439348-36439367 | None:intergenic | 50.0% |
! | GTATGGTGATCTGGTGTTGG+AGG | - | chr6_2:36440463-36440482 | Msa0916400:CDS | 50.0% |
! | GTTAAAGAGGGGGAGCATGG+TGG | + | chr6_2:36432390-36432409 | None:intergenic | 55.0% |
CTACTTGTGGGCCATGGGAA+AGG | + | chr6_2:36432549-36432568 | None:intergenic | 55.0% | |
CAGTAGGAATGGACCTGGCT+AGG | - | chr6_2:36436237-36436256 | Msa0916400:intron | 55.0% | |
! | CGGAAAGAGCATACCTAGCC+AGG | + | chr6_2:36436253-36436272 | None:intergenic | 55.0% |
ATATGGGTGGCCGCATTACC+CGG | + | chr6_2:36436273-36436292 | None:intergenic | 55.0% | |
GGTATGCTTAACCAGTGCCC+GGG | - | chr6_2:36436732-36436751 | Msa0916400:intron | 55.0% | |
CCCGGACACCCCACTTATTT+AGG | - | chr6_2:36438549-36438568 | Msa0916400:intron | 55.0% | |
AGCGCGTGTGGTCTTCACAG+GGG | + | chr6_2:36432422-36432441 | None:intergenic | 60.0% | |
GAGCGCGTGTGGTCTTCACA+GGG | + | chr6_2:36432423-36432442 | None:intergenic | 60.0% | |
AACCAGTGTCCCAGCAGCAC+CGG | + | chr6_2:36436604-36436623 | None:intergenic | 60.0% | |
GCGCGTGTGGTCTTCACAGG+GGG | + | chr6_2:36432421-36432440 | None:intergenic | 65.0% | |
GGAGCGCGTGTGGTCTTCAC+AGG | + | chr6_2:36432424-36432443 | None:intergenic | 65.0% | |
!! | AACCGGTGCTGCTGGGACAC+TGG | - | chr6_2:36436599-36436618 | Msa0916400:intron | 65.0% |
! | TAACCAGTGCCCGGGAGCAC+CGG | - | chr6_2:36436740-36436759 | Msa0916400:intron | 65.0% |
TCCTGCTAACCGGTGCTCCC+GGG | + | chr6_2:36436752-36436771 | None:intergenic | 65.0% | |
GTCCTGCTAACCGGTGCTCC+CGG | + | chr6_2:36436753-36436772 | None:intergenic | 65.0% | |
AGGAGCGGGGGTTAGAACCC+CGG | - | chr6_2:36438531-36438550 | Msa0916400:intron | 65.0% | |
TAACCGGTGCTCCCGGGCAC+TGG | + | chr6_2:36436746-36436765 | None:intergenic | 70.0% | |
!! | GCCCGGGAGCACCGGTTAGC+AGG | - | chr6_2:36436748-36436767 | Msa0916400:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 36431928 | 36440657 | 36431928 | ID=Msa0916400;Name=Msa0916400 |
chr6_2 | mRNA | 36431928 | 36440657 | 36431928 | ID=Msa0916400-mRNA-1;Parent=Msa0916400;Name=Msa0916400-mRNA-1;_AED=0.04;_eAED=0.04;_QI=118|1|1|1|0.83|0.71|7|318|638 |
chr6_2 | exon | 36431928 | 36432477 | 36431928 | ID=Msa0916400-mRNA-1:exon:6311;Parent=Msa0916400-mRNA-1 |
chr6_2 | exon | 36432795 | 36432872 | 36432795 | ID=Msa0916400-mRNA-1:exon:6310;Parent=Msa0916400-mRNA-1 |
chr6_2 | exon | 36432954 | 36433346 | 36432954 | ID=Msa0916400-mRNA-1:exon:6309;Parent=Msa0916400-mRNA-1 |
chr6_2 | exon | 36434472 | 36434760 | 36434472 | ID=Msa0916400-mRNA-1:exon:6308;Parent=Msa0916400-mRNA-1 |
chr6_2 | exon | 36435238 | 36435448 | 36435238 | ID=Msa0916400-mRNA-1:exon:6307;Parent=Msa0916400-mRNA-1 |
chr6_2 | exon | 36439806 | 36440543 | 36439806 | ID=Msa0916400-mRNA-1:exon:6306;Parent=Msa0916400-mRNA-1 |
chr6_2 | exon | 36440564 | 36440657 | 36440564 | ID=Msa0916400-mRNA-1:exon:6305;Parent=Msa0916400-mRNA-1 |
chr6_2 | five_prime_UTR | 36440564 | 36440657 | 36440564 | ID=Msa0916400-mRNA-1:five_prime_utr;Parent=Msa0916400-mRNA-1 |
chr6_2 | five_prime_UTR | 36440520 | 36440543 | 36440520 | ID=Msa0916400-mRNA-1:five_prime_utr;Parent=Msa0916400-mRNA-1 |
chr6_2 | CDS | 36439806 | 36440519 | 36439806 | ID=Msa0916400-mRNA-1:cds;Parent=Msa0916400-mRNA-1 |
chr6_2 | CDS | 36435238 | 36435448 | 36435238 | ID=Msa0916400-mRNA-1:cds;Parent=Msa0916400-mRNA-1 |
chr6_2 | CDS | 36434472 | 36434760 | 36434472 | ID=Msa0916400-mRNA-1:cds;Parent=Msa0916400-mRNA-1 |
chr6_2 | CDS | 36432954 | 36433346 | 36432954 | ID=Msa0916400-mRNA-1:cds;Parent=Msa0916400-mRNA-1 |
chr6_2 | CDS | 36432795 | 36432872 | 36432795 | ID=Msa0916400-mRNA-1:cds;Parent=Msa0916400-mRNA-1 |
chr6_2 | CDS | 36432246 | 36432477 | 36432246 | ID=Msa0916400-mRNA-1:cds;Parent=Msa0916400-mRNA-1 |
chr6_2 | three_prime_UTR | 36431928 | 36432245 | 36431928 | ID=Msa0916400-mRNA-1:three_prime_utr;Parent=Msa0916400-mRNA-1 |
Gene Sequence |
Protein sequence |