AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0991630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0991630 MtrunA17_Chr6g0472571 97.653 639 12 2 1 639 1 636 0.0 1298
Msa0991630 MtrunA17_Chr1g0203741 71.732 612 156 5 24 630 19 618 0.0 929
Msa0991630 MtrunA17_Chr7g0246701 63.265 637 214 6 15 637 3 633 0.0 858
Msa0991630 MtrunA17_Chr8g0350391 62.679 627 217 5 22 637 18 638 0.0 857
Msa0991630 MtrunA17_Chr8g0388881 58.361 610 241 6 32 637 28 628 0.0 775
Msa0991630 MtrunA17_Chr4g0055031 55.556 612 256 6 27 638 17 612 0.0 740
Msa0991630 MtrunA17_Chr8g0361791 54.690 629 259 7 15 638 2 609 0.0 719
Msa0991630 MtrunA17_Chr5g0416991 54.486 613 252 7 31 638 18 608 0.0 701
Msa0991630 MtrunA17_Chr3g0092501 52.209 611 261 7 31 638 21 603 0.0 658
Msa0991630 MtrunA17_Chr7g0214551 53.686 529 234 5 94 613 26 552 0.0 610
Msa0991630 MtrunA17_Chr8g0369481 50.851 529 247 9 108 631 70 590 0.0 534
Msa0991630 MtrunA17_Chr5g0409411 45.274 603 289 11 32 629 24 590 6.61e-177 515
Msa0991630 MtrunA17_Chr8g0350351 43.962 530 268 9 111 630 91 601 1.51e-165 486
Msa0991630 MtrunA17_Chr7g0246681 44.612 529 264 9 111 629 78 587 8.84e-163 479
Msa0991630 MtrunA17_Chr1g0167381 39.566 599 314 14 31 605 14 588 9.65e-149 444
Msa0991630 MtrunA17_Chr3g0112341 42.315 527 276 11 111 626 156 665 6.60e-147 441
Msa0991630 MtrunA17_Chr5g0435751 40.832 529 269 9 107 626 124 617 1.67e-143 431
Msa0991630 MtrunA17_Chr1g0183721 40.526 570 297 12 83 634 45 590 3.48e-143 429
Msa0991630 MtrunA17_Chr1g0187601 42.259 549 283 12 108 638 91 623 4.21e-143 430
Msa0991630 MtrunA17_Chr1g0159741 39.964 558 304 14 85 628 118 658 1.32e-139 422
Msa0991630 MtrunA17_Chr3g0130381 39.553 627 312 21 47 629 173 776 4.33e-138 422
Msa0991630 MtrunA17_Chr8g0384431 42.642 530 257 20 117 625 298 801 1.80e-135 416
Msa0991630 MtrunA17_Chr3g0125511 40.445 539 276 14 112 629 228 742 3.93e-131 403
Msa0991630 MtrunA17_Chr5g0437501 40.296 541 267 16 113 629 97 605 7.57e-130 395
Msa0991630 MtrunA17_Chr1g0171781 37.283 633 339 15 19 630 9 604 2.82e-129 393
Msa0991630 MtrunA17_Chr8g0372471 40.467 514 277 12 116 616 386 883 1.21e-128 400
Msa0991630 MtrunA17_Chr3g0113981 41.551 503 255 15 116 604 174 651 5.00e-126 387
Msa0991630 MtrunA17_Chr1g0155141 37.079 534 282 17 112 629 204 699 3.24e-104 331
Msa0991630 MtrunA17_Chr5g0426281 32.973 555 311 17 111 633 149 674 5.10e-93 301
Msa0991630 MtrunA17_Chr3g0115931 32.014 556 325 13 111 633 157 692 1.48e-92 300
Msa0991630 MtrunA17_Chr5g0404771 48.347 242 100 6 117 342 329 561 1.73e-70 239
Msa0991630 MtrunA17_Chr5g0404761 36.594 276 156 7 357 620 1 269 3.03e-55 189
Msa0991630 MtrunA17_Chr4g0043121 28.321 399 251 9 28 415 23 397 3.18e-52 186
Msa0991630 MtrunA17_Chr4g0043131 44.118 136 72 3 486 618 40 174 4.33e-33 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0991630 AT2G45750.1 61.981 626 212 6 24 637 12 623 0.0 843
Msa0991630 AT4G00750.1 60.063 636 232 7 14 638 7 631 0.0 826
Msa0991630 AT1G33170.1 56.704 619 249 5 32 634 24 639 0.0 767
Msa0991630 AT4G10440.1 57.955 616 245 6 24 635 17 622 0.0 763
Msa0991630 AT1G26850.2 55.105 617 256 7 25 635 13 614 0.0 720
Msa0991630 AT1G26850.1 55.105 617 256 7 25 635 13 614 0.0 720
Msa0991630 AT4G18030.1 54.833 600 255 4 32 631 22 605 0.0 703
Msa0991630 AT2G43200.2 52.399 521 239 5 108 624 91 606 0.0 583
Msa0991630 AT2G43200.1 52.399 521 239 5 108 624 91 606 0.0 583
Msa0991630 AT1G26850.3 52.277 505 220 7 25 523 13 502 0.0 550
Msa0991630 AT1G31850.1 45.246 610 290 14 31 631 24 598 0.0 541
Msa0991630 AT1G31850.2 45.246 610 290 14 31 631 24 598 0.0 541
Msa0991630 AT1G31850.4 45.246 610 290 14 31 631 24 598 0.0 541
Msa0991630 AT1G31850.3 45.246 610 290 14 31 631 24 598 0.0 541
Msa0991630 AT4G19120.1 47.689 541 268 8 105 638 67 599 9.49e-179 520
Msa0991630 AT4G19120.2 47.689 541 268 8 105 638 67 599 9.49e-179 520
Msa0991630 AT4G00740.1 44.382 534 270 7 111 635 84 599 3.75e-165 486
Msa0991630 AT4G00740.2 44.382 534 270 7 111 635 84 599 3.75e-165 486
Msa0991630 AT2G39750.1 43.364 535 269 12 107 627 176 690 4.55e-154 461
Msa0991630 AT5G06050.1 40.106 566 309 11 78 631 119 666 3.68e-149 447
Msa0991630 AT1G04430.1 38.619 637 326 15 31 634 14 618 9.03e-148 442
Msa0991630 AT1G04430.3 38.619 637 326 15 31 634 14 618 9.03e-148 442
Msa0991630 AT1G04430.2 38.619 637 326 15 31 634 14 618 9.03e-148 442
Msa0991630 AT4G19120.3 48.864 440 211 7 105 537 67 499 1.11e-147 437
Msa0991630 AT4G14360.1 43.520 517 261 10 104 605 72 572 4.12e-144 432
Msa0991630 AT4G14360.2 43.520 517 261 10 104 605 72 572 4.12e-144 432
Msa0991630 AT5G14430.1 42.831 544 276 12 109 633 81 608 5.59e-142 427
Msa0991630 AT1G77260.1 41.210 529 279 12 111 627 146 654 1.13e-141 427
Msa0991630 AT3G23300.2 42.278 518 268 10 104 606 75 576 1.67e-140 423
Msa0991630 AT3G23300.1 42.278 518 268 10 104 606 75 576 1.67e-140 423
Msa0991630 AT5G14430.2 42.279 544 279 12 109 633 81 608 8.65e-140 421
Msa0991630 AT3G51070.1 42.026 533 267 17 116 629 380 889 3.96e-133 412
Msa0991630 AT2G34300.2 41.220 541 270 15 117 636 250 763 9.03e-133 408
Msa0991630 AT2G34300.3 41.220 541 270 15 117 636 250 763 9.03e-133 408
Msa0991630 AT2G34300.1 41.220 541 270 15 117 636 250 763 9.03e-133 408
Msa0991630 AT5G04060.1 38.750 560 302 9 88 630 63 598 2.48e-132 401
Msa0991630 AT3G56080.1 40.152 528 268 14 117 629 114 608 2.64e-132 402
Msa0991630 AT3G10200.1 40.296 541 276 13 111 630 75 589 1.03e-131 399
Msa0991630 AT5G64030.1 41.243 531 272 15 117 629 308 816 1.08e-131 407
Msa0991630 AT1G29470.1 40.113 531 282 15 117 632 250 759 1.57e-130 402
Msa0991630 AT1G29470.2 40.113 531 282 15 117 632 250 759 1.57e-130 402
Msa0991630 AT2G40280.1 40.417 527 267 17 116 629 89 581 3.31e-129 393
Msa0991630 AT3G10200.2 40.272 514 259 13 111 602 75 562 6.35e-123 377
Msa0991630 AT3G51070.2 43.656 465 228 15 116 563 380 827 1.08e-116 368
Msa0991630 AT3G56080.2 40.909 462 233 13 117 563 114 550 1.42e-116 359
Msa0991630 AT1G19430.1 37.406 532 284 16 112 629 226 722 1.46e-103 330
Msa0991630 AT1G19430.3 37.406 532 284 16 112 629 226 722 1.46e-103 330
Msa0991630 AT1G13860.4 30.051 589 340 13 62 618 44 592 2.20e-91 295
Msa0991630 AT1G13860.3 30.051 589 340 13 62 618 44 592 2.20e-91 295
Msa0991630 AT1G13860.1 30.051 589 340 13 62 618 44 592 2.20e-91 295
Msa0991630 AT1G13860.5 30.051 589 340 13 62 618 44 592 2.20e-91 295
Msa0991630 AT1G78240.1 32.613 555 312 17 111 628 149 678 2.10e-88 290
Msa0991630 AT1G78240.2 32.613 555 312 17 111 628 149 678 2.10e-88 290
Msa0991630 AT2G03480.2 30.499 541 306 11 107 618 85 584 9.17e-86 280
Msa0991630 AT2G03480.1 31.144 533 324 12 107 618 85 595 3.43e-85 279
Msa0991630 AT1G13860.2 32.898 459 252 12 189 618 5 436 1.31e-80 262
Msa0991630 AT1G19430.2 33.250 400 224 13 112 498 226 595 1.13e-56 202
Msa0991630 AT2G03480.3 32.155 283 178 3 107 380 85 362 8.80e-48 174

Find 167 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGACATGAATGCTTATT+TGG 0.073772 6_4:+57219829 Msa0991630:CDS
CACTTGTTAAATATCCTATT+TGG 0.102129 6_4:+57219867 Msa0991630:CDS
TTTAGCTACATTCTCAATTT+TGG 0.149493 6_4:-57218494 None:intergenic
CTTCTTTGTTGGACACTTTA+GGG 0.225235 6_4:-57219616 None:intergenic
TTGGAGGGTTTGAAGGGTTT+TGG 0.225865 6_4:-57214159 None:intergenic
AGAGGTGTTCCTGCAATTAT+TGG 0.248757 6_4:+57217772 Msa0991630:CDS
TGATTGGAATGTATCATAAT+TGG 0.257260 6_4:+57219954 Msa0991630:CDS
TTTAAGATTTCATGTTTCTT+AGG 0.258970 6_4:-57214561 None:intergenic
ATTTCAAAGGGGACCATTAA+AGG 0.260047 6_4:+57219698 Msa0991630:CDS
TCTTCTTTGTTGGACACTTT+AGG 0.260669 6_4:-57219617 None:intergenic
TTAAATACATTGTCTATTAG+AGG 0.263740 6_4:+57220855 Msa0991630:three_prime_UTR
TATTTGCTGTGAAGAAATAT+TGG 0.264293 6_4:+57220630 Msa0991630:CDS
ATTGCAAATTCACTCAAAAT+AGG 0.265035 6_4:+57218587 Msa0991630:CDS
GACAATGTATTTAACTAATA+AGG 0.265408 6_4:-57220846 None:intergenic
CATATTCAGGCCATGGAATA+AGG 0.284184 6_4:-57217861 None:intergenic
ACCTGAAATTTCTTCTTTGT+TGG 0.284477 6_4:-57219627 None:intergenic
ATGTGGAGGTGCTGTTGTTT+TGG 0.310627 6_4:-57214269 None:intergenic
CAATTCGCTGGAAGAAATAT+TGG 0.311579 6_4:+57218428 Msa0991630:CDS
CTCAAATGACAATACTATTT+AGG 0.311881 6_4:+57220664 Msa0991630:CDS
TAGAGATGATGTTGATATAT+TGG 0.313175 6_4:+57220520 Msa0991630:CDS
CTTATTCCATGGCCTGAATA+TGG 0.319290 6_4:+57217862 Msa0991630:CDS
TTGAGGTGTGACACCTTTAA+TGG 0.321435 6_4:-57219711 None:intergenic
GATAAGTATATTGATGATAT+TGG 0.322381 6_4:+57214771 Msa0991630:CDS
TTATTCTGCTCTTGGCAAAA+AGG 0.325310 6_4:-57218610 None:intergenic
CAGGTGGGGAATTAAATAAT+TGG 0.328337 6_4:+57219645 Msa0991630:CDS
AATAAGCATTCATGTCTAAT+AGG 0.333573 6_4:-57219826 None:intergenic
GAGGTGTTCCTGCAATTATT+GGG 0.334013 6_4:+57217773 Msa0991630:CDS
CTAATTATTACACTTCCTTC+TGG 0.339638 6_4:-57220500 None:intergenic
TTTCAAGAGGCCCATCTTCA+TGG 0.344644 6_4:-57220595 None:intergenic
AGAAAGGTGATATTGCTATT+TGG 0.345270 6_4:+57218542 Msa0991630:CDS
TCCAACAAAGAAGAAATTTC+AGG 0.345485 6_4:+57219626 Msa0991630:CDS
CAATATTTCTTCCAGCGAAT+TGG 0.347489 6_4:-57218427 None:intergenic
ACTTGTTAAATATCCTATTT+GGG 0.348847 6_4:+57219868 Msa0991630:CDS
ATGTATACCTGTCATTATAA+AGG 0.354957 6_4:-57220123 None:intergenic
TGTGTGTGTGTTTGGCTAAT+GGG 0.358012 6_4:-57213893 None:intergenic
TTCTGTCGCGCGTGTATTTG+AGG 0.367142 6_4:-57214515 None:intergenic
AAGAAAACTATACCATATTC+AGG 0.368879 6_4:-57217874 None:intergenic
AGCACATACCATGCTTTGTC+AGG 0.370155 6_4:-57218634 None:intergenic
TGTCAGGGTTATTCTGCTCT+TGG 0.371069 6_4:-57218618 None:intergenic
GGAGCGCGTGTGGTCTTCAC+AGG 0.374882 6_4:-57214493 None:intergenic
TTAGACATGAATGCTTATTT+GGG 0.377741 6_4:+57219830 Msa0991630:CDS
TTCTACGTCCTGGTGGGTAT+TGG 0.381477 6_4:+57218389 Msa0991630:CDS
ACACAGAATCAGCATGAATT+AGG 0.382074 6_4:-57220096 None:intergenic
ACCACATTCATAACCCAAAT+AGG 0.383835 6_4:-57219881 None:intergenic
TCTCAAAAGACAATCAACTA+TGG 0.388474 6_4:+57219738 Msa0991630:CDS
TTCGGATGTGTATGGTGATC+TGG 0.396642 6_4:+57220800 Msa0991630:three_prime_UTR
ATGTATGCAGGTTGCTAGTT+GGG 0.397277 6_4:+57217663 Msa0991630:intron
CTACTTGTGGGCCATGGGAA+TGG 0.398929 6_4:-57214618 None:intergenic
GCCATGTCAAAGGCTCTAGA+AGG 0.400141 6_4:-57217823 None:intergenic
TGCAAGCAAACTTTGTTGAA+TGG 0.402919 6_4:+57220949 Msa0991630:three_prime_UTR
GTGAGAACTGCTGTTGATAC+TGG 0.405743 6_4:+57214822 Msa0991630:CDS
GGTGGGTATTGGATTCTATC+TGG 0.410013 6_4:+57218400 Msa0991630:CDS
ATAAGTATATTGATGATATT+GGG 0.413613 6_4:+57214772 Msa0991630:CDS
GTATCAACTTTAGCTTGAAT+AGG 0.420482 6_4:-57219905 None:intergenic
TTCGAACGACATAAGTTGTT+CGG 0.421737 6_4:+57220743 Msa0991630:three_prime_UTR
TGAATTAGGTCATAAGTTCT+AGG 0.424421 6_4:-57220082 None:intergenic
GTTGTTGTGGATGTGGTTGT+TGG 0.425040 6_4:-57214423 None:intergenic
TGTACCTTACCGTCATTTAA+CGG 0.426177 6_4:+57214662 Msa0991630:CDS
GTTCAATTTGCTCTTGAAAG+AGG 0.426870 6_4:+57217754 Msa0991630:CDS
TCTGCTTTGTAGATGTGAAT+TGG 0.430180 6_4:+57220442 Msa0991630:intron
AACAATCAACTTGGAAAAGC+TGG 0.441002 6_4:+57219791 Msa0991630:CDS
ATGTAGCTAAAAGCCTTTGT+TGG 0.443086 6_4:+57218506 Msa0991630:CDS
AGAAGATGTTGTTGTGGATG+TGG 0.444695 6_4:-57214430 None:intergenic
GTCATAAAGCCCTGGAATCT+CGG 0.451101 6_4:-57221001 None:intergenic
TTGTTGGACACTTTAGGGAG+TGG 0.452460 6_4:-57219611 None:intergenic
ATATATGAAAGAGGGTTGAT+TGG 0.453552 6_4:+57219938 Msa0991630:CDS
GGAAGAAATATTGGAAAGGA+TGG 0.455736 6_4:+57218437 Msa0991630:CDS
GTTCTCGCTGCCTTATTCCA+TGG 0.455747 6_4:+57217851 Msa0991630:CDS
AATGGATTCTTGTAACCGTT+TGG 0.456034 6_4:-57214600 None:intergenic
AGTGTATTTGGAGGGTTTGA+AGG 0.458351 6_4:-57214166 None:intergenic
TTCTTGTAACCGTTTGGTGC+TGG 0.459471 6_4:-57214594 None:intergenic
TGTTTAGCCTTTATAATGAC+AGG 0.459506 6_4:+57220116 Msa0991630:CDS
ATGTCTCTACTTGTGGGCCA+TGG 0.459713 6_4:-57214624 None:intergenic
GCAAAGACCCCAATAATTGC+AGG 0.463464 6_4:-57217781 None:intergenic
ATGGTCCCCTTTGAAATCCT+AGG 0.473543 6_4:-57219692 None:intergenic
GGTGGTACTATGTTTCCTAA+TGG 0.474022 6_4:+57214744 Msa0991630:CDS
CAAATTGTGGACCATGAAGA+TGG 0.476768 6_4:+57220584 Msa0991630:CDS
AGACAACAATCCGAGATTCC+AGG 0.477490 6_4:+57220991 Msa0991630:three_prime_UTR
TTGGAAAAGCTGGTAGATAC+AGG 0.480976 6_4:+57219801 Msa0991630:CDS
TGTCTCTACTTGTGGGCCAT+GGG 0.481164 6_4:-57214623 None:intergenic
AAAGAGCATAATCAATGGCT+TGG 0.481691 6_4:+57220550 Msa0991630:CDS
AATACAAAAGTGAGGAAGGA+AGG 0.482029 6_4:-57220903 None:intergenic
CATAATCAATGGCTTGGAAT+GGG 0.484368 6_4:+57220556 Msa0991630:CDS
ATATACTTATCAGCACCATT+AGG 0.486668 6_4:-57214759 None:intergenic
CCTTTGTTGGAATAAAATAG+TGG 0.487141 6_4:+57218519 Msa0991630:CDS
TCTGTCGCGCGTGTATTTGA+GGG 0.488048 6_4:-57214514 None:intergenic
TATTTCTTCCAGCGAATTGG+TGG 0.489851 6_4:-57218424 None:intergenic
ACTGCTGTTGATACTGGCTG+TGG 0.490156 6_4:+57214828 Msa0991630:CDS
CAAGCTAAAGTTGATACACT+TGG 0.491094 6_4:+57219911 Msa0991630:CDS
TAGTACCACCACCAGGAAAA+CGG 0.493127 6_4:-57214731 None:intergenic
AAGTTGATTAATCTTGAAGA+TGG 0.495272 6_4:+57214795 Msa0991630:CDS
TATCTGGTCCACCAATTCGC+TGG 0.497419 6_4:+57218416 Msa0991630:CDS
TCAATCTTCACCATGGCAAA+TGG 0.500404 6_4:+57214123 Msa0991630:exon
CCAAGCCATGTCTCTACTTG+TGG 0.501584 6_4:-57214631 None:intergenic
GAGCGCGTGTGGTCTTCACA+GGG 0.502667 6_4:-57214492 None:intergenic
TCCTATTTGGGTTATGAATG+TGG 0.505514 6_4:+57219880 Msa0991630:CDS
AAAAGTTTCTCTCTTTCAAG+AGG 0.510531 6_4:-57220608 None:intergenic
ACCCCACCTAGGATTTCAAA+GGG 0.515316 6_4:+57219686 Msa0991630:CDS
AACAGTGTCAATTGCACCAA+GGG 0.515618 6_4:+57217714 Msa0991630:CDS
CTAAATAGTATTGTCATTTG+AGG 0.516055 6_4:-57220663 None:intergenic
CCCCTTTGAAATCCTAGGTG+GGG 0.516176 6_4:-57219687 None:intergenic
TGGAATAAAATAGTGGAGAA+AGG 0.516837 6_4:+57218526 Msa0991630:CDS
GCATAATCAATGGCTTGGAA+TGG 0.517234 6_4:+57220555 Msa0991630:CDS
GTGTATTTGGAGGGTTTGAA+GGG 0.520547 6_4:-57214165 None:intergenic
ACATATTGCTAGAGATGGAT+AGG 0.520899 6_4:+57220468 Msa0991630:CDS
CAAGCCATGTCTCTACTTGT+GGG 0.523142 6_4:-57214630 None:intergenic
GATGTATGCAGGTTGCTAGT+TGG 0.525030 6_4:+57217662 Msa0991630:intron
CCCTTCTAGAGCCTTTGACA+TGG 0.525416 6_4:+57217822 Msa0991630:CDS
TCTTAGGACAGTGTCGTTCG+CGG 0.526064 6_4:-57214545 None:intergenic
GACATGAATGCTTATTTGGG+TGG 0.530858 6_4:+57219833 Msa0991630:CDS
GGAAGACATATTGCTAGAGA+TGG 0.531377 6_4:+57220463 Msa0991630:CDS
ATAGTATTGTCATTTGAGGC+AGG 0.531671 6_4:-57220659 None:intergenic
TCCCCTTTGAAATCCTAGGT+GGG 0.532337 6_4:-57219688 None:intergenic
TCCACCGTTAAATGACGGTA+AGG 0.535817 6_4:-57214666 None:intergenic
TATGTCACGTGATAGTAGAT+AGG 0.536542 6_4:-57217689 None:intergenic
ATGAGAGAAGAAATCTAAGT+TGG 0.536693 6_4:-57214385 None:intergenic
TTAAAATACAAAAGTGAGGA+AGG 0.541004 6_4:-57220907 None:intergenic
ACTATACCATATTCAGGCCA+TGG 0.542687 6_4:-57217868 None:intergenic
GTTGATAGAATTCTACGTCC+TGG 0.555005 6_4:+57218379 Msa0991630:CDS
TGTGCTTCATGAGTATCCCT+TGG 0.555852 6_4:-57217730 None:intergenic
TGTGTATGGTGATCTGGTGT+TGG 0.556268 6_4:+57220806 Msa0991630:three_prime_UTR
AAAGTAAAGAGCATAATCAA+TGG 0.558091 6_4:+57220545 Msa0991630:CDS
CTTGGAGCAATATATGAAAG+AGG 0.559920 6_4:+57219929 Msa0991630:CDS
GCGCGTGTGGTCTTCACAGG+GGG 0.563505 6_4:-57214490 None:intergenic
CGCTGGAAGAAATATTGGAA+AGG 0.570543 6_4:+57218433 Msa0991630:CDS
CCACAAGTAGAGACATGGCT+TGG 0.575701 6_4:+57214631 Msa0991630:CDS
CAAAGAAGAAATTTCAGGTG+GGG 0.578360 6_4:+57219631 Msa0991630:CDS
AGAATAACCCTGACAAAGCA+TGG 0.578720 6_4:+57218626 Msa0991630:CDS
AGAACAATGTGCCATGTCAA+AGG 0.578937 6_4:-57217833 None:intergenic
AACCCCACCTAGGATTTCAA+AGG 0.579195 6_4:+57219685 Msa0991630:CDS
GAAGAAATATTGGAAAGGAT+GGG 0.586262 6_4:+57218438 Msa0991630:CDS
AACAAAGAAGAAATTTCAGG+TGG 0.587726 6_4:+57219629 Msa0991630:CDS
GGGGTGTAGTCAGTTAAAGA+GGG 0.591990 6_4:-57214471 None:intergenic
TGTCGTGTTCCAGCACCAAA+CGG 0.596625 6_4:+57214585 Msa0991630:CDS
GGAATGGGAGAGTCAAATTG+TGG 0.598742 6_4:+57220571 Msa0991630:CDS
CTGCTGTTGATACTGGCTGT+GGG 0.599695 6_4:+57214829 Msa0991630:CDS
ATTGTCATTTGAGGCAGGAG+AGG 0.601191 6_4:-57220654 None:intergenic
AAATTGTGGACCATGAAGAT+GGG 0.601433 6_4:+57220585 Msa0991630:CDS
TGTATTTGAGGGAGCGCGTG+TGG 0.601727 6_4:-57214503 None:intergenic
GATAGGATTCTTAGACCAGA+AGG 0.608500 6_4:+57220485 Msa0991630:CDS
TCAAAGGCTCTAGAAGGGAA+AGG 0.608892 6_4:-57217817 None:intergenic
GATAGAATTCTACGTCCTGG+TGG 0.611198 6_4:+57218382 Msa0991630:CDS
CCATGTCAAAGGCTCTAGAA+GGG 0.611499 6_4:-57217822 None:intergenic
AGGTGTTCCTGCAATTATTG+GGG 0.614069 6_4:+57217774 Msa0991630:CDS
GCACATACCATGCTTTGTCA+GGG 0.614775 6_4:-57218633 None:intergenic
GTATTGAGAAGATGTTGTTG+TGG 0.625636 6_4:-57214436 None:intergenic
GTCCCCTTTGAAATCCTAGG+TGG 0.627138 6_4:-57219689 None:intergenic
ACAAAGAAGAAATTTCAGGT+GGG 0.634673 6_4:+57219630 Msa0991630:CDS
TGTATGCAGGTTGCTAGTTG+GGG 0.635603 6_4:+57217664 Msa0991630:intron
TTGGAGCAATATATGAAAGA+GGG 0.636053 6_4:+57219930 Msa0991630:CDS
AGTGGAGGTACCATTTGCCA+TGG 0.636635 6_4:-57214133 None:intergenic
ATAGAATTCTACGTCCTGGT+GGG 0.639209 6_4:+57218383 Msa0991630:CDS
ACAATTAAAATACAAAAGTG+AGG 0.641655 6_4:-57220911 None:intergenic
AGCGCGTGTGGTCTTCACAG+GGG 0.644812 6_4:-57214491 None:intergenic
GTATGGTGATCTGGTGTTGG+AGG 0.645732 6_4:+57220809 Msa0991630:three_prime_UTR
GTTACAAGAATCCATTCCCA+TGG 0.657904 6_4:+57214607 Msa0991630:CDS
TGCTGTTGATACTGGCTGTG+GGG 0.658528 6_4:+57214830 Msa0991630:CDS
GACTAAAATCAACCCCACCT+AGG 0.665392 6_4:+57219675 Msa0991630:CDS
ACCTTACCGTCATTTAACGG+TGG 0.667967 6_4:+57214665 Msa0991630:CDS
GGAAACATAGTACCACCACC+AGG 0.673211 6_4:-57214738 None:intergenic
ATGGCCCACAAGTAGAGACA+TGG 0.675055 6_4:+57214626 Msa0991630:CDS
CACACACTCAATCTTCACCA+TGG 0.681989 6_4:+57214116 Msa0991630:exon
GATAGAATCCAATACCCACC+AGG 0.684534 6_4:-57218397 None:intergenic
TAACAGTGTCAATTGCACCA+AGG 0.686736 6_4:+57217713 Msa0991630:CDS
GGGTGTAGTCAGTTAAAGAG+GGG 0.699749 6_4:-57214470 None:intergenic
GGTGTAGTCAGTTAAAGAGG+GGG 0.715881 6_4:-57214469 None:intergenic
CCCCACCTAGGATTTCAAAG+GGG 0.775769 6_4:+57219687 Msa0991630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGAATGAATAATTATTTTA+TGG - chr6_4:57216615-57216634 None:intergenic 10.0%
!! GAAAAAAAATATAAAGAAAA+AGG - chr6_4:57216699-57216718 None:intergenic 10.0%
!!! TTAATGTTATTTTTTTAATG+GGG - chr6_4:57217387-57217406 None:intergenic 10.0%
!!! CTTTAATGTTATTTTTTTAA+TGG - chr6_4:57217389-57217408 None:intergenic 10.0%
!! AATATAAAAATTAACTATCA+CGG + chr6_4:57217536-57217555 Msa0991630:intron 10.0%
!! TATAAAAGAATAAAAGTAAT+TGG - chr6_4:57219186-57219205 None:intergenic 10.0%
!!! GATGATTTTTTTTTTTTTAA+AGG + chr6_4:57220013-57220032 Msa0991630:intron 10.0%
!!! TATTTTAATTGTTACTTTTT+GGG + chr6_4:57220922-57220941 Msa0991630:three_prime_UTR 10.0%
!!! TTTTTGGATTTTGATTTTTT+TGG - chr6_4:57214341-57214360 None:intergenic 15.0%
!!! ATAAGTATATTGATGATATT+GGG + chr6_4:57214772-57214791 Msa0991630:CDS 15.0%
!! TTTCATTCATCAAATAATTA+CGG + chr6_4:57215358-57215377 Msa0991630:intron 15.0%
!!! TTTCTAGATTTTTTTATAAG+AGG + chr6_4:57215644-57215663 Msa0991630:intron 15.0%
!! ATTTCAAATTATTGAACTTT+AGG - chr6_4:57215774-57215793 None:intergenic 15.0%
!!! ATTTTGGGATATTATTATAA+TGG + chr6_4:57215825-57215844 Msa0991630:intron 15.0%
!!! TTTTGGGATATTATTATAAT+GGG + chr6_4:57215826-57215845 Msa0991630:intron 15.0%
!!! TCATTTAGCTATTAATTTTT+AGG - chr6_4:57216286-57216305 None:intergenic 15.0%
!! TAAATGACTAGATTAATTAA+TGG + chr6_4:57216299-57216318 Msa0991630:intron 15.0%
!!! TGGAATTCTTTTTTTTTTTT+TGG - chr6_4:57216595-57216614 None:intergenic 15.0%
!!! TACATATCTAGTTATTTTTT+GGG + chr6_4:57217039-57217058 Msa0991630:intron 15.0%
!! TTTATATAATCCATATTTCA+AGG - chr6_4:57218021-57218040 None:intergenic 15.0%
!! ACAAATAATATGCAATAATT+TGG - chr6_4:57218764-57218783 None:intergenic 15.0%
!!! TATTTTCTCATTTTTTTTAG+AGG + chr6_4:57218900-57218919 Msa0991630:intron 15.0%
!!! TATTTTCTCATATTTTCTTA+TGG + chr6_4:57218925-57218944 Msa0991630:intron 15.0%
!!! ATTTTCTTATGGTAAAAAAA+TGG + chr6_4:57218936-57218955 Msa0991630:intron 15.0%
!!! TATGTTTTTCATTTAGTATA+AGG + chr6_4:57219204-57219223 Msa0991630:intron 15.0%
!!! ATGTTTGTACTTATTTTTAT+TGG + chr6_4:57219550-57219569 Msa0991630:intron 15.0%
!!! TTTTTTTTTTTTAAAGGGTT+TGG + chr6_4:57220019-57220038 Msa0991630:intron 15.0%
!! ATAATTCTTATATTGTGATT+TGG - chr6_4:57220386-57220405 None:intergenic 15.0%
!!! GTATTTTAATTGTTACTTTT+TGG + chr6_4:57220921-57220940 Msa0991630:three_prime_UTR 15.0%
!!! TTTAAGATTTCATGTTTCTT+AGG - chr6_4:57214564-57214583 None:intergenic 20.0%
!!! GATAAGTATATTGATGATAT+TGG + chr6_4:57214771-57214790 Msa0991630:CDS 20.0%
!!! ATTTTGTTTCCTAAAAAAAC+TGG - chr6_4:57214921-57214940 None:intergenic 20.0%
!!! TTTTTTAGGAAACAAAATTG+AGG + chr6_4:57214923-57214942 Msa0991630:intron 20.0%
!!! TTTTTAGGAAACAAAATTGA+GGG + chr6_4:57214924-57214943 Msa0991630:intron 20.0%
!! AATAAAAAGTGAGAAAAACA+AGG - chr6_4:57215160-57215179 None:intergenic 20.0%
!!! TTGTTTTTCTCACTTTTTAT+TGG + chr6_4:57215159-57215178 Msa0991630:intron 20.0%
!!! CACTTATATTGCTTTTATTA+AGG - chr6_4:57215479-57215498 None:intergenic 20.0%
!!! ATGTTTTTTCTTTCTTGAAA+GGG + chr6_4:57215510-57215529 Msa0991630:intron 20.0%
!!! ACAAAATTTTTATGAACCTA+AGG + chr6_4:57215615-57215634 Msa0991630:intron 20.0%
!!! TAGATTTTTTTATAAGAGGA+TGG + chr6_4:57215648-57215667 Msa0991630:intron 20.0%
!! TATCACTTTCTCTATAAAAT+AGG + chr6_4:57215731-57215750 Msa0991630:intron 20.0%
!!! TTCAATAATTTGAAATTGTG+AGG + chr6_4:57215778-57215797 Msa0991630:intron 20.0%
!!! TTTGGGATATTATTATAATG+GGG + chr6_4:57215827-57215846 Msa0991630:intron 20.0%
!! CTAGTCAATTTATGTTATTA+AGG + chr6_4:57215884-57215903 Msa0991630:intron 20.0%
!! CAATTTATGTTATTAAGGAA+TGG + chr6_4:57215889-57215908 Msa0991630:intron 20.0%
!! GTAAAGAATCTTTATGAAAA+AGG - chr6_4:57216011-57216030 None:intergenic 20.0%
!! TCTTTACGTTAATTAATTCT+TGG + chr6_4:57216024-57216043 Msa0991630:intron 20.0%
!! CTTTACGTTAATTAATTCTT+GGG + chr6_4:57216025-57216044 Msa0991630:intron 20.0%
!! ATAGCATACTAGTAAAAATT+AGG + chr6_4:57216091-57216110 Msa0991630:intron 20.0%
!! TAGCATACTAGTAAAAATTA+GGG + chr6_4:57216092-57216111 Msa0991630:intron 20.0%
!!! GTATTTATTTTGCATTTTAG+TGG + chr6_4:57216510-57216529 Msa0991630:intron 20.0%
!!! TTTTTTGGTCAAGTATTTTA+TGG - chr6_4:57216580-57216599 None:intergenic 20.0%
!! ATTCCTTCATAAAAAGAAAA+AGG + chr6_4:57216647-57216666 Msa0991630:intron 20.0%
!!! TTTCCTTTTTCTTTTTATGA+AGG - chr6_4:57216653-57216672 None:intergenic 20.0%
!! AAATTTCAAAAGATCTGATT+TGG + chr6_4:57216744-57216763 Msa0991630:intron 20.0%
!!! ATATATACATTGACTATATC+TGG + chr6_4:57216831-57216850 Msa0991630:intron 20.0%
!!! TATATACATTGACTATATCT+GGG + chr6_4:57216832-57216851 Msa0991630:intron 20.0%
!! GTACAATAATAAACTAAGTT+GGG - chr6_4:57217022-57217041 None:intergenic 20.0%
!! TGTACAATAATAAACTAAGT+TGG - chr6_4:57217023-57217042 None:intergenic 20.0%
!!! GTACATATCTAGTTATTTTT+TGG + chr6_4:57217038-57217057 Msa0991630:intron 20.0%
!! TCGATAGAGTAAAAAAATAA+GGG - chr6_4:57217244-57217263 None:intergenic 20.0%
!!! TTTTCTTTTGATGAGTTTTT+TGG - chr6_4:57217905-57217924 None:intergenic 20.0%
!! ATGTATATAATAGACAACAA+AGG - chr6_4:57217958-57217977 None:intergenic 20.0%
!! AATGTTACACATATTCTTAA+AGG - chr6_4:57217990-57218009 None:intergenic 20.0%
!!! GAATATGTGTAACATTATTT+TGG + chr6_4:57217994-57218013 Msa0991630:intron 20.0%
!! AGCATAATTCATACTTTAAA+AGG + chr6_4:57218210-57218229 Msa0991630:intron 20.0%
!!! TTTTACTTTGTTGAATTAGA+TGG + chr6_4:57218340-57218359 Msa0991630:intron 20.0%
!!! TTGCAATCTAAATGATTTTT+GGG - chr6_4:57218574-57218593 None:intergenic 20.0%
!!! TTTGCAATCTAAATGATTTT+TGG - chr6_4:57218575-57218594 None:intergenic 20.0%
!! TAAGAGATTCAATAGAAAAA+TGG - chr6_4:57218660-57218679 None:intergenic 20.0%
!! ATAATATGCAATAATTTGGA+AGG - chr6_4:57218760-57218779 None:intergenic 20.0%
!!! TTTTTCAAGGTAAAATAAGT+GGG - chr6_4:57219095-57219114 None:intergenic 20.0%
!! AAAAGTAATTGGATAAAGAA+AGG - chr6_4:57219175-57219194 None:intergenic 20.0%
!! TGAATTCTATATATATTGCT+TGG - chr6_4:57219355-57219374 None:intergenic 20.0%
!! ACATGAAAAAAGGATTTAAT+TGG - chr6_4:57219534-57219553 None:intergenic 20.0%
!! ATAAGTACAAACATGAAAAA+AGG - chr6_4:57219544-57219563 None:intergenic 20.0%
!!! TATTTTTATTGGTCACTTTT+AGG + chr6_4:57219561-57219580 Msa0991630:intron 20.0%
!! AAAAAAGTTAACAATCAACT+TGG + chr6_4:57219782-57219801 Msa0991630:CDS 20.0%
!!! ACTTGTTAAATATCCTATTT+GGG + chr6_4:57219868-57219887 Msa0991630:CDS 20.0%
!!! ATTTGACTTTATAATCTGAA+GGG - chr6_4:57220244-57220263 None:intergenic 20.0%
!!! AATTTGACTTTATAATCTGA+AGG - chr6_4:57220245-57220264 None:intergenic 20.0%
!!! GATATCAAAATTGTGTTTTT+CGG + chr6_4:57220782-57220801 Msa0991630:three_prime_UTR 20.0%
!! GACAATGTATTTAACTAATA+AGG - chr6_4:57220849-57220868 None:intergenic 20.0%
!! TTAAATACATTGTCTATTAG+AGG + chr6_4:57220855-57220874 Msa0991630:three_prime_UTR 20.0%
!! ACAATTAAAATACAAAAGTG+AGG - chr6_4:57220914-57220933 None:intergenic 20.0%
!!! TGTTTTTTTGCAGTTGAAAA+AGG - chr6_4:57214193-57214212 None:intergenic 25.0%
!!! TGCATCATTTCATACTTTTT+AGG + chr6_4:57214240-57214259 Msa0991630:CDS 25.0%
!!! GATATTTTTGTTAGTTGATG+TGG - chr6_4:57214289-57214308 None:intergenic 25.0%
!!! TGATTTTTTTGGAGACATTT+TGG - chr6_4:57214330-57214349 None:intergenic 25.0%
!!! GTTTTTGTGTTTGTTGTTTT+TGG - chr6_4:57214357-57214376 None:intergenic 25.0%
!! AAGTTGATTAATCTTGAAGA+TGG + chr6_4:57214795-57214814 Msa0991630:CDS 25.0%
!!! ATATTGCTACCAGTTTTTTT+AGG + chr6_4:57214909-57214928 Msa0991630:intron 25.0%
!!! GTGACACATTTTACTTTTTT+AGG + chr6_4:57215042-57215061 Msa0991630:intron 25.0%
!! TTTTTATTGGTCAAAAACGA+TGG + chr6_4:57215172-57215191 Msa0991630:intron 25.0%
! AAAAAGATATATGTTGTCCT+TGG - chr6_4:57215325-57215344 None:intergenic 25.0%
!!! GATGTTTTTTCTTTCTTGAA+AGG + chr6_4:57215509-57215528 Msa0991630:intron 25.0%
! ACTTTCTTGTAAACTAACTA+AGG + chr6_4:57215564-57215583 Msa0991630:intron 25.0%
! AATCTAGAAAAACTTTCCTT+AGG - chr6_4:57215634-57215653 None:intergenic 25.0%
! TATGAAAAAGGAATCATTAC+TGG - chr6_4:57215999-57216018 None:intergenic 25.0%
!!! TAACGTATCTTTTTGAAAGA+AGG + chr6_4:57216429-57216448 Msa0991630:intron 25.0%
! AATTCTATACCATGGTATTA+TGG - chr6_4:57216557-57216576 None:intergenic 25.0%
!! TTTTATGGAATTCTATACCA+TGG - chr6_4:57216565-57216584 None:intergenic 25.0%
!!! CACTATGTTACTGTTTTTTA+AGG - chr6_4:57216918-57216937 None:intergenic 25.0%
! GTGAATTAATTGCCTATAAA+TGG + chr6_4:57216992-57217011 Msa0991630:intron 25.0%
!! TAGAGAAAGTTTCTTCTTTT+AGG + chr6_4:57217180-57217199 Msa0991630:intron 25.0%
! CTCGATAGAGTAAAAAAATA+AGG - chr6_4:57217245-57217264 None:intergenic 25.0%
!!! ACGGATTTGATTTTAATAGA+AGG + chr6_4:57217555-57217574 Msa0991630:intron 25.0%
!!! CGGATTTGATTTTAATAGAA+GGG + chr6_4:57217556-57217575 Msa0991630:intron 25.0%
!!! GGATTTGATTTTAATAGAAG+GGG + chr6_4:57217557-57217576 Msa0991630:intron 25.0%
!!! TTATTTTGGTCCTTGAAATA+TGG + chr6_4:57218008-57218027 Msa0991630:intron 25.0%
!! TTTAGCTACATTCTCAATTT+TGG - chr6_4:57218497-57218516 None:intergenic 25.0%
! ATTGCAAATTCACTCAAAAT+AGG + chr6_4:57218587-57218606 Msa0991630:CDS 25.0%
! TGTTTAGATGTTATTGAAGT+TGG + chr6_4:57218691-57218710 Msa0991630:intron 25.0%
! TATTTGTGCATAGAAATCTA+TGG + chr6_4:57218777-57218796 Msa0991630:intron 25.0%
! GAATATTAGAGATGTGAAAA+AGG + chr6_4:57218852-57218871 Msa0991630:intron 25.0%
!!! TTTTCAAGGTAAAATAAGTG+GGG - chr6_4:57219094-57219113 None:intergenic 25.0%
!!! CTTTTTCAAGGTAAAATAAG+TGG - chr6_4:57219096-57219115 None:intergenic 25.0%
!!! TTTTTTTTCCAGTAGTTTAG+TGG - chr6_4:57219130-57219149 None:intergenic 25.0%
! CTACTGGAAAAAAAAAACTT+TGG + chr6_4:57219135-57219154 Msa0991630:intron 25.0%
! ATGCAATATCTTTATCACTA+AGG - chr6_4:57219254-57219273 None:intergenic 25.0%
! GAGAATTTACAGATAACAAA+TGG - chr6_4:57219429-57219448 None:intergenic 25.0%
!!! TTGATTAGTTGGTTTGAAAT+TGG - chr6_4:57219453-57219472 None:intergenic 25.0%
!!! GTTTGTTATACTTGATTAGT+TGG - chr6_4:57219464-57219483 None:intergenic 25.0%
! AATAAGCATTCATGTCTAAT+AGG - chr6_4:57219829-57219848 None:intergenic 25.0%
! ATTAGACATGAATGCTTATT+TGG + chr6_4:57219829-57219848 Msa0991630:CDS 25.0%
! TTAGACATGAATGCTTATTT+GGG + chr6_4:57219830-57219849 Msa0991630:CDS 25.0%
!! CACTTGTTAAATATCCTATT+TGG + chr6_4:57219867-57219886 Msa0991630:CDS 25.0%
! TGATTGGAATGTATCATAAT+TGG + chr6_4:57219954-57219973 Msa0991630:CDS 25.0%
!!! TTGGATTTTAATTGTTTTGC+AGG + chr6_4:57220038-57220057 Msa0991630:intron 25.0%
! ATGTATACCTGTCATTATAA+AGG - chr6_4:57220126-57220145 None:intergenic 25.0%
!!! TATATTGTGATTTGGTTGAA+TGG - chr6_4:57220378-57220397 None:intergenic 25.0%
! TAGAGATGATGTTGATATAT+TGG + chr6_4:57220520-57220539 Msa0991630:CDS 25.0%
!! AAAGTAAAGAGCATAATCAA+TGG + chr6_4:57220545-57220564 Msa0991630:CDS 25.0%
!!! TATTTGCTGTGAAGAAATAT+TGG + chr6_4:57220630-57220649 Msa0991630:CDS 25.0%
!! CTAAATAGTATTGTCATTTG+AGG - chr6_4:57220666-57220685 None:intergenic 25.0%
! CTCAAATGACAATACTATTT+AGG + chr6_4:57220664-57220683 Msa0991630:CDS 25.0%
!!! TAAGACTTTTTAGAAGCAAA+TGG - chr6_4:57220705-57220724 None:intergenic 25.0%
! TTAAAATACAAAAGTGAGGA+AGG - chr6_4:57220910-57220929 None:intergenic 25.0%
TATTGGGTGAGAATTGAAAT+GGG - chr6_4:57213952-57213971 None:intergenic 30.0%
GTGATGATTATTTGTGTTTG+AGG - chr6_4:57214026-57214045 None:intergenic 30.0%
ATTATAGATTGAGAGGAGTT+TGG - chr6_4:57214051-57214070 None:intergenic 30.0%
GTGAGTTATTATAGATTGAG+AGG - chr6_4:57214058-57214077 None:intergenic 30.0%
! AAAAAGGAAGTGTATTTGGA+GGG - chr6_4:57214177-57214196 None:intergenic 30.0%
! GTTGAAAAAGGAAGTGTATT+TGG - chr6_4:57214181-57214200 None:intergenic 30.0%
!! ATTTTTGTTAGTTGATGTGG+AGG - chr6_4:57214286-57214305 None:intergenic 30.0%
!!! TTGGTGTGACTTTTTTGATT+TGG - chr6_4:57214311-57214330 None:intergenic 30.0%
ATGAGAGAAGAAATCTAAGT+TGG - chr6_4:57214388-57214407 None:intergenic 30.0%
! CAAAATTGGATACGTTTTGA+CGG + chr6_4:57214699-57214718 Msa0991630:CDS 30.0%
ATATACTTATCAGCACCATT+AGG - chr6_4:57214762-57214781 None:intergenic 30.0%
!! TGATGCTGTTTATATCGTTT+TGG + chr6_4:57215072-57215091 Msa0991630:intron 30.0%
!! GATGCTGTTTATATCGTTTT+GGG + chr6_4:57215073-57215092 Msa0991630:intron 30.0%
TGTGAAAGCAAGTAATTGAA+AGG - chr6_4:57215297-57215316 None:intergenic 30.0%
! ATTTTCTTGAGATGAACCTA+AGG + chr6_4:57215671-57215690 Msa0991630:intron 30.0%
ATATGATAGAAACCTTCCTT+AGG - chr6_4:57215690-57215709 None:intergenic 30.0%
TCATATGAACCTAACTAACA+AGG + chr6_4:57215704-57215723 Msa0991630:intron 30.0%
TGATAAAGACCTTGTTAGTT+AGG - chr6_4:57215716-57215735 None:intergenic 30.0%
CAACGATTTACATTTGTCAT+GGG - chr6_4:57215916-57215935 None:intergenic 30.0%
ACAACGATTTACATTTGTCA+TGG - chr6_4:57215917-57215936 None:intergenic 30.0%
CTATTATGTAAGACAATGAC+AGG - chr6_4:57215962-57215981 None:intergenic 30.0%
CTGTCATTGTCTTACATAAT+AGG + chr6_4:57215960-57215979 Msa0991630:intron 30.0%
TAATTCTTGGGTACTTTAAG+TGG + chr6_4:57216037-57216056 Msa0991630:intron 30.0%
AATTCTTGGGTACTTTAAGT+GGG + chr6_4:57216038-57216057 Msa0991630:intron 30.0%
! AAGATACGTTACTTTGTTCA+TGG - chr6_4:57216420-57216439 None:intergenic 30.0%
ATATATATGTCCACATTACC+CGG - chr6_4:57216817-57216836 None:intergenic 30.0%
!!! CACTGTGTTACTGTTTTTTA+AGG - chr6_4:57216942-57216961 None:intergenic 30.0%
GCTATCAAGAAAATTAGTTG+TGG - chr6_4:57217293-57217312 None:intergenic 30.0%
ATAACATTAAAGTCATGTGC+TGG + chr6_4:57217397-57217416 Msa0991630:intron 30.0%
! TGTAATACCAATGATGATGT+AGG + chr6_4:57217478-57217497 Msa0991630:intron 30.0%
!! AAAACATTGATGATGTATGC+AGG + chr6_4:57217651-57217670 Msa0991630:intron 30.0%
TAATTCTAACCTATGAAGCA+TGG + chr6_4:57218044-57218063 Msa0991630:intron 30.0%
GAAGAAATATTGGAAAGGAT+GGG + chr6_4:57218438-57218457 Msa0991630:CDS 30.0%
! CCACTATTTTATTCCAACAA+AGG - chr6_4:57218522-57218541 None:intergenic 30.0%
CCTTTGTTGGAATAAAATAG+TGG + chr6_4:57218519-57218538 Msa0991630:CDS 30.0%
! TGGAATAAAATAGTGGAGAA+AGG + chr6_4:57218526-57218545 Msa0991630:CDS 30.0%
! AGAAAGGTGATATTGCTATT+TGG + chr6_4:57218542-57218561 Msa0991630:CDS 30.0%
! GAAGTTGGTTAAAAGATGTT+AGG + chr6_4:57218706-57218725 Msa0991630:intron 30.0%
AGACATTGCATTATATATGC+AGG + chr6_4:57219045-57219064 Msa0991630:intron 30.0%
!!! GTTGGAAATTCACTTTTTCA+AGG - chr6_4:57219108-57219127 None:intergenic 30.0%
! CCAACATTTGTTAGTTGAAA+GGG - chr6_4:57219492-57219511 None:intergenic 30.0%
! ACCAACATTTGTTAGTTGAA+AGG - chr6_4:57219493-57219512 None:intergenic 30.0%
ATTGGTAGAAATTAAGTGTG+AGG - chr6_4:57219516-57219535 None:intergenic 30.0%
TCCAACAAAGAAGAAATTTC+AGG + chr6_4:57219626-57219645 Msa0991630:CDS 30.0%
ACCTGAAATTTCTTCTTTGT+TGG - chr6_4:57219630-57219649 None:intergenic 30.0%
AACAAAGAAGAAATTTCAGG+TGG + chr6_4:57219629-57219648 Msa0991630:CDS 30.0%
! ACAAAGAAGAAATTTCAGGT+GGG + chr6_4:57219630-57219649 Msa0991630:CDS 30.0%
!! TTGTCTTTTGAGAATGTTTG+AGG - chr6_4:57219731-57219750 None:intergenic 30.0%
TCTCAAAAGACAATCAACTA+TGG + chr6_4:57219738-57219757 Msa0991630:CDS 30.0%
!! GTATCAACTTTAGCTTGAAT+AGG - chr6_4:57219908-57219927 None:intergenic 30.0%
TTGGAGCAATATATGAAAGA+GGG + chr6_4:57219930-57219949 Msa0991630:CDS 30.0%
! ATATATGAAAGAGGGTTGAT+TGG + chr6_4:57219938-57219957 Msa0991630:CDS 30.0%
TGAATTAGGTCATAAGTTCT+AGG - chr6_4:57220085-57220104 None:intergenic 30.0%
! TGTTTAGCCTTTATAATGAC+AGG + chr6_4:57220116-57220135 Msa0991630:CDS 30.0%
TTGTTTATTTGTGAGTTCAG+TGG - chr6_4:57220272-57220291 None:intergenic 30.0%
CTAATTATTACACTTCCTTC+TGG - chr6_4:57220503-57220522 None:intergenic 30.0%
AAAAGTTTCTCTCTTTCAAG+AGG - chr6_4:57220611-57220630 None:intergenic 30.0%
AGCAAATGGAGAAAAAAGTA+GGG - chr6_4:57220691-57220710 None:intergenic 30.0%
AAGCAAATGGAGAAAAAAGT+AGG - chr6_4:57220692-57220711 None:intergenic 30.0%
TTTGGGAGAAAGAGAAATGT+GGG - chr6_4:57213922-57213941 None:intergenic 35.0%
!! TTTTGGGAGAAAGAGAAATG+TGG - chr6_4:57213923-57213942 None:intergenic 35.0%
TTTCTCTTTCTCCCAAAATC+CGG + chr6_4:57213925-57213944 Msa0991630:intron 35.0%
CTATTGGGTGAGAATTGAAA+TGG - chr6_4:57213953-57213972 None:intergenic 35.0%
CATTTCAATTCTCACCCAAT+AGG + chr6_4:57213951-57213970 Msa0991630:intron 35.0%
ATCTGTGAAAGGATGGTATT+GGG - chr6_4:57213984-57214003 None:intergenic 35.0%
AATCTGTGAAAGGATGGTAT+TGG - chr6_4:57213985-57214004 None:intergenic 35.0%
!! TTGAGTTGAGTGATGAAGAT+GGG - chr6_4:57214093-57214112 None:intergenic 35.0%
!! TTTGAGTTGAGTGATGAAGA+TGG - chr6_4:57214094-57214113 None:intergenic 35.0%
! GAAAAAGGAAGTGTATTTGG+AGG - chr6_4:57214178-57214197 None:intergenic 35.0%
GTATTGAGAAGATGTTGTTG+TGG - chr6_4:57214439-57214458 None:intergenic 35.0%
! AATGGATTCTTGTAACCGTT+TGG - chr6_4:57214603-57214622 None:intergenic 35.0%
TGTACCTTACCGTCATTTAA+CGG + chr6_4:57214662-57214681 Msa0991630:CDS 35.0%
! CTTTTTCCACCGTTAAATGA+CGG - chr6_4:57214674-57214693 None:intergenic 35.0%
TGGAAAAAGCTGGTCAAAAT+TGG + chr6_4:57214685-57214704 Msa0991630:CDS 35.0%
TTTCTCTCTCTTTCTCTGTT+TGG + chr6_4:57214866-57214885 Msa0991630:intron 35.0%
TTCTCTCTCTTTCTCTGTTT+GGG + chr6_4:57214867-57214886 Msa0991630:intron 35.0%
!!! TCTTTGTCCTTGTCTTGTTT+TGG + chr6_4:57214970-57214989 Msa0991630:intron 35.0%
GATTTCACCAAAACAAGACA+AGG - chr6_4:57214980-57214999 None:intergenic 35.0%
AAAACGATGGAGAGAGAAAA+AGG + chr6_4:57215185-57215204 Msa0991630:intron 35.0%
! AACCACTTCTTGACAACTTT+TGG - chr6_4:57215257-57215276 None:intergenic 35.0%
! AATTGTGAGGTCTTTTGTCT+TGG + chr6_4:57215791-57215810 Msa0991630:intron 35.0%
! TTGGTATGGGGTAAGATTTT+GGG + chr6_4:57215810-57215829 Msa0991630:intron 35.0%
ATTCTTGGGTACTTTAAGTG+GGG + chr6_4:57216039-57216058 Msa0991630:intron 35.0%
AGTGGGGTTAACATAACATA+AGG + chr6_4:57216055-57216074 Msa0991630:intron 35.0%
AGTCGTATGAATATGATGCA+TGG + chr6_4:57216357-57216376 Msa0991630:intron 35.0%
ATGCCCTTTGATTATCAGTT+TGG + chr6_4:57216389-57216408 Msa0991630:intron 35.0%
TGCCCTTTGATTATCAGTTT+GGG + chr6_4:57216390-57216409 Msa0991630:intron 35.0%
! TACGTTACTTTGTTCATGGA+TGG - chr6_4:57216416-57216435 None:intergenic 35.0%
ATGGATCTTAGCGAATTTCT+AGG - chr6_4:57216538-57216557 None:intergenic 35.0%
AAAAGGACAAATTGTCGTGA+TGG - chr6_4:57216682-57216701 None:intergenic 35.0%
! AAGTTGGGTATGCCATTTAT+AGG - chr6_4:57217007-57217026 None:intergenic 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG - chr6_4:57217080-57217099 None:intergenic 35.0%
!! AATCATTAACTTGTGCCTTG+AGG - chr6_4:57217081-57217100 None:intergenic 35.0%
TTTCTTAACATGTGCCCTAA+GGG + chr6_4:57217203-57217222 Msa0991630:intron 35.0%
!! AGTGTTAACTTGTACCCTTA+GGG - chr6_4:57217220-57217239 None:intergenic 35.0%
!! TAGTGTTAACTTGTACCCTT+AGG - chr6_4:57217221-57217240 None:intergenic 35.0%
ACATGTTGAGCAACATTGTA+GGG - chr6_4:57217461-57217480 None:intergenic 35.0%
TACATGTTGAGCAACATTGT+AGG - chr6_4:57217462-57217481 None:intergenic 35.0%
TCATCAACCTACATCATCAT+TGG - chr6_4:57217488-57217507 None:intergenic 35.0%
TATGTCACGTGATAGTAGAT+AGG - chr6_4:57217692-57217711 None:intergenic 35.0%
! GTTCAATTTGCTCTTGAAAG+AGG + chr6_4:57217754-57217773 Msa0991630:CDS 35.0%
CAATATTTCTTCCAGCGAAT+TGG - chr6_4:57218430-57218449 None:intergenic 35.0%
CAATTCGCTGGAAGAAATAT+TGG + chr6_4:57218428-57218447 Msa0991630:CDS 35.0%
GGAAGAAATATTGGAAAGGA+TGG + chr6_4:57218437-57218456 Msa0991630:CDS 35.0%
ATGTAGCTAAAAGCCTTTGT+TGG + chr6_4:57218506-57218525 Msa0991630:CDS 35.0%
TTATTCTGCTCTTGGCAAAA+AGG - chr6_4:57218613-57218632 None:intergenic 35.0%
! GTTACATTAGATGCCATTTG+TGG + chr6_4:57218728-57218747 Msa0991630:intron 35.0%
TATTGTCATCCAATCAACTC+AGG + chr6_4:57218995-57219014 Msa0991630:intron 35.0%
ATTGTCATCCAATCAACTCA+GGG + chr6_4:57218996-57219015 Msa0991630:intron 35.0%
TTGCATTATATATGCAGGAG+CGG + chr6_4:57219050-57219069 Msa0991630:intron 35.0%
ATTTCCAACCACTAAACTAC+TGG + chr6_4:57219119-57219138 Msa0991630:intron 35.0%
! TTTTCCAGTAGTTTAGTGGT+TGG - chr6_4:57219126-57219145 None:intergenic 35.0%
TTTGTTAGTTGAAAGGGACT+AGG - chr6_4:57219486-57219505 None:intergenic 35.0%
CCCTTTCAACTAACAAATGT+TGG + chr6_4:57219489-57219508 Msa0991630:intron 35.0%
CTTCTTTGTTGGACACTTTA+GGG - chr6_4:57219619-57219638 None:intergenic 35.0%
TCTTCTTTGTTGGACACTTT+AGG - chr6_4:57219620-57219639 None:intergenic 35.0%
! CAAAGAAGAAATTTCAGGTG+GGG + chr6_4:57219631-57219650 Msa0991630:CDS 35.0%
CAGGTGGGGAATTAAATAAT+TGG + chr6_4:57219645-57219664 Msa0991630:CDS 35.0%
ATTTCAAAGGGGACCATTAA+AGG + chr6_4:57219698-57219717 Msa0991630:CDS 35.0%
AACAATCAACTTGGAAAAGC+TGG + chr6_4:57219791-57219810 Msa0991630:CDS 35.0%
! TCCTATTTGGGTTATGAATG+TGG + chr6_4:57219880-57219899 Msa0991630:CDS 35.0%
ACCACATTCATAACCCAAAT+AGG - chr6_4:57219884-57219903 None:intergenic 35.0%
!! CAAGCTAAAGTTGATACACT+TGG + chr6_4:57219911-57219930 Msa0991630:CDS 35.0%
CTTGGAGCAATATATGAAAG+AGG + chr6_4:57219929-57219948 Msa0991630:CDS 35.0%
ACACAGAATCAGCATGAATT+AGG - chr6_4:57220099-57220118 None:intergenic 35.0%
TCTGCTTTGTAGATGTGAAT+TGG + chr6_4:57220442-57220461 Msa0991630:intron 35.0%
ACATATTGCTAGAGATGGAT+AGG + chr6_4:57220468-57220487 Msa0991630:CDS 35.0%
! AAAGAGCATAATCAATGGCT+TGG + chr6_4:57220550-57220569 Msa0991630:CDS 35.0%
! CATAATCAATGGCTTGGAAT+GGG + chr6_4:57220556-57220575 Msa0991630:CDS 35.0%
AAATTGTGGACCATGAAGAT+GGG + chr6_4:57220585-57220604 Msa0991630:CDS 35.0%
! ATAGTATTGTCATTTGAGGC+AGG - chr6_4:57220662-57220681 None:intergenic 35.0%
TTCGAACGACATAAGTTGTT+CGG + chr6_4:57220743-57220762 Msa0991630:three_prime_UTR 35.0%
!! TTGTGTTTTTCGGATGTGTA+TGG + chr6_4:57220792-57220811 Msa0991630:three_prime_UTR 35.0%
AATACAAAAGTGAGGAAGGA+AGG - chr6_4:57220906-57220925 None:intergenic 35.0%
TGCAAGCAAACTTTGTTGAA+TGG + chr6_4:57220949-57220968 Msa0991630:three_prime_UTR 35.0%
TTGGGAGAAAGAGAAATGTG+GGG - chr6_4:57213921-57213940 None:intergenic 40.0%
! TTGAAATGGGACCGGATTTT+GGG - chr6_4:57213939-57213958 None:intergenic 40.0%
! ATTGAAATGGGACCGGATTT+TGG - chr6_4:57213940-57213959 None:intergenic 40.0%
! TATTGGGCTATTGGCCTATT+GGG - chr6_4:57213968-57213987 None:intergenic 40.0%
! AAAGGATGGTATTGGGCTAT+TGG - chr6_4:57213977-57213996 None:intergenic 40.0%
GTTTGAGGAAATGTTCGTGT+GGG - chr6_4:57214011-57214030 None:intergenic 40.0%
TGTTTGAGGAAATGTTCGTG+TGG - chr6_4:57214012-57214031 None:intergenic 40.0%
ATAGATTGAGAGGAGTTTGG+TGG - chr6_4:57214048-57214067 None:intergenic 40.0%
! TTGAGTGATGAAGATGGGTT+TGG - chr6_4:57214088-57214107 None:intergenic 40.0%
TCAATCTTCACCATGGCAAA+TGG + chr6_4:57214123-57214142 Msa0991630:exon 40.0%
!!! TTTGAAGGGTTTTGGAGAAG+TGG - chr6_4:57214154-57214173 None:intergenic 40.0%
GTGTATTTGGAGGGTTTGAA+GGG - chr6_4:57214168-57214187 None:intergenic 40.0%
AGTGTATTTGGAGGGTTTGA+AGG - chr6_4:57214169-57214188 None:intergenic 40.0%
AGAAGATGTTGTTGTGGATG+TGG - chr6_4:57214433-57214452 None:intergenic 40.0%
GTTACAAGAATCCATTCCCA+TGG + chr6_4:57214607-57214626 Msa0991630:CDS 40.0%
CATTTAACGGTGGAAAAAGC+TGG + chr6_4:57214675-57214694 Msa0991630:CDS 40.0%
GGTGGTACTATGTTTCCTAA+TGG + chr6_4:57214744-57214763 Msa0991630:CDS 40.0%
TCTCTCTCTTTCTCTGTTTG+GGG + chr6_4:57214868-57214887 Msa0991630:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr6_4:57215195-57215214 Msa0991630:intron 40.0%
GTCCAAAAGTTGTCAAGAAG+TGG + chr6_4:57215252-57215271 Msa0991630:intron 40.0%
TCTTGAGATGAACCTAAGGA+AGG + chr6_4:57215675-57215694 Msa0991630:intron 40.0%
! TGAGGTCTTTTGTCTTGGTA+TGG + chr6_4:57215796-57215815 Msa0991630:intron 40.0%
! GAGGTCTTTTGTCTTGGTAT+GGG + chr6_4:57215797-57215816 Msa0991630:intron 40.0%
! AGGTCTTTTGTCTTGGTATG+GGG + chr6_4:57215798-57215817 Msa0991630:intron 40.0%
! CTTGGTATGGGGTAAGATTT+TGG + chr6_4:57215809-57215828 Msa0991630:intron 40.0%
GGCCCAAACTGATAATCAAA+GGG - chr6_4:57216395-57216414 None:intergenic 40.0%
TGGCCCAAACTGATAATCAA+AGG - chr6_4:57216396-57216415 None:intergenic 40.0%
CGCTAAGATCCATAATACCA+TGG + chr6_4:57216545-57216564 Msa0991630:intron 40.0%
AAGTGCATCTACAGTAGGAA+TGG + chr6_4:57216770-57216789 Msa0991630:intron 40.0%
!!! TATGCTTTTTCCGGGTAATG+TGG + chr6_4:57216804-57216823 Msa0991630:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr6_4:57217063-57217082 Msa0991630:intron 40.0%
GTTTCTTAACATGTGCCCTA+AGG + chr6_4:57217202-57217221 Msa0991630:intron 40.0%
! CGAGACTTTTCTCAAATCAG+AGG + chr6_4:57217261-57217280 Msa0991630:intron 40.0%
! TGTGCTGGTCACATGATTAA+AGG + chr6_4:57217412-57217431 Msa0991630:intron 40.0%
! GTGCTGGTCACATGATTAAA+GGG + chr6_4:57217413-57217432 Msa0991630:intron 40.0%
ATGTATGCAGGTTGCTAGTT+GGG + chr6_4:57217663-57217682 Msa0991630:intron 40.0%
TAACAGTGTCAATTGCACCA+AGG + chr6_4:57217713-57217732 Msa0991630:CDS 40.0%
AACAGTGTCAATTGCACCAA+GGG + chr6_4:57217714-57217733 Msa0991630:CDS 40.0%
!! AGAGGTGTTCCTGCAATTAT+TGG + chr6_4:57217772-57217791 Msa0991630:CDS 40.0%
! GAGGTGTTCCTGCAATTATT+GGG + chr6_4:57217773-57217792 Msa0991630:CDS 40.0%
AGGTGTTCCTGCAATTATTG+GGG + chr6_4:57217774-57217793 Msa0991630:CDS 40.0%
AGAACAATGTGCCATGTCAA+AGG - chr6_4:57217836-57217855 None:intergenic 40.0%
CATATTCAGGCCATGGAATA+AGG - chr6_4:57217864-57217883 None:intergenic 40.0%
CTTATTCCATGGCCTGAATA+TGG + chr6_4:57217862-57217881 Msa0991630:CDS 40.0%
ACTATACCATATTCAGGCCA+TGG - chr6_4:57217871-57217890 None:intergenic 40.0%
GATGTTTGTCCATGCTTCAT+AGG - chr6_4:57218056-57218075 None:intergenic 40.0%
GACAAACATCAGACAAGACA+CGG + chr6_4:57218066-57218085 Msa0991630:intron 40.0%
GCACAGACACTTCTAATCAA+AGG - chr6_4:57218178-57218197 None:intergenic 40.0%
! GTTGATAGAATTCTACGTCC+TGG + chr6_4:57218379-57218398 Msa0991630:CDS 40.0%
ATAGAATTCTACGTCCTGGT+GGG + chr6_4:57218383-57218402 Msa0991630:CDS 40.0%
TATTTCTTCCAGCGAATTGG+TGG - chr6_4:57218427-57218446 None:intergenic 40.0%
CGCTGGAAGAAATATTGGAA+AGG + chr6_4:57218433-57218452 Msa0991630:CDS 40.0%
AGAATAACCCTGACAAAGCA+TGG + chr6_4:57218626-57218645 Msa0991630:CDS 40.0%
TGGAAGGTAGTTTCCACAAA+TGG - chr6_4:57218744-57218763 None:intergenic 40.0%
!! TTGATGAACCCTGAGTTGAT+TGG - chr6_4:57219007-57219026 None:intergenic 40.0%
TGCATTATATATGCAGGAGC+GGG + chr6_4:57219051-57219070 Msa0991630:intron 40.0%
!! GGGGTTGATTTTAGTCTTTG+AGG - chr6_4:57219671-57219690 None:intergenic 40.0%
TTGAGGTGTGACACCTTTAA+TGG - chr6_4:57219714-57219733 None:intergenic 40.0%
TTGGAAAAGCTGGTAGATAC+AGG + chr6_4:57219801-57219820 Msa0991630:CDS 40.0%
GACATGAATGCTTATTTGGG+TGG + chr6_4:57219833-57219852 Msa0991630:CDS 40.0%
! TTGTTAAGAGTGTGTGTTGC+TGG - chr6_4:57220410-57220429 None:intergenic 40.0%
GGAAGACATATTGCTAGAGA+TGG + chr6_4:57220463-57220482 Msa0991630:CDS 40.0%
GATAGGATTCTTAGACCAGA+AGG + chr6_4:57220485-57220504 Msa0991630:CDS 40.0%
! GCATAATCAATGGCTTGGAA+TGG + chr6_4:57220555-57220574 Msa0991630:CDS 40.0%
CAAATTGTGGACCATGAAGA+TGG + chr6_4:57220584-57220603 Msa0991630:CDS 40.0%
GGTGAGAATTGAAATGGGAC+CGG - chr6_4:57213947-57213966 None:intergenic 45.0%
! GTATTGGGCTATTGGCCTAT+TGG - chr6_4:57213969-57213988 None:intergenic 45.0%
GGGAAGAATCTGTGAAAGGA+TGG - chr6_4:57213991-57214010 None:intergenic 45.0%
GTGTGGGAAGAATCTGTGAA+AGG - chr6_4:57213995-57214014 None:intergenic 45.0%
CACACACTCAATCTTCACCA+TGG + chr6_4:57214116-57214135 Msa0991630:exon 45.0%
! TTGGAGGGTTTGAAGGGTTT+TGG - chr6_4:57214162-57214181 None:intergenic 45.0%
!!! ATGTGGAGGTGCTGTTGTTT+TGG - chr6_4:57214272-57214291 None:intergenic 45.0%
GTTGTTGTGGATGTGGTTGT+TGG - chr6_4:57214426-57214445 None:intergenic 45.0%
GGTGTAGTCAGTTAAAGAGG+GGG - chr6_4:57214472-57214491 None:intergenic 45.0%
GGGTGTAGTCAGTTAAAGAG+GGG - chr6_4:57214473-57214492 None:intergenic 45.0%
GGGGTGTAGTCAGTTAAAGA+GGG - chr6_4:57214474-57214493 None:intergenic 45.0%
!! TTCTTGTAACCGTTTGGTGC+TGG - chr6_4:57214597-57214616 None:intergenic 45.0%
CAAGCCATGTCTCTACTTGT+GGG - chr6_4:57214633-57214652 None:intergenic 45.0%
ACCTTACCGTCATTTAACGG+TGG + chr6_4:57214665-57214684 Msa0991630:CDS 45.0%
TCCACCGTTAAATGACGGTA+AGG - chr6_4:57214669-57214688 None:intergenic 45.0%
! GGTGATAAGTTCCGTTTTCC+TGG + chr6_4:57214720-57214739 Msa0991630:CDS 45.0%
! GATAAGTTCCGTTTTCCTGG+TGG + chr6_4:57214723-57214742 Msa0991630:CDS 45.0%
TAGTACCACCACCAGGAAAA+CGG - chr6_4:57214734-57214753 None:intergenic 45.0%
GTGAGAACTGCTGTTGATAC+TGG + chr6_4:57214822-57214841 Msa0991630:CDS 45.0%
CTTGCTTTCACATTCGTCCA+AGG + chr6_4:57215305-57215324 Msa0991630:intron 45.0%
AAAATGTTAACGAGTGCCCC+GGG - chr6_4:57216263-57216282 None:intergenic 45.0%
GAAAATGTTAACGAGTGCCC+CGG - chr6_4:57216264-57216283 None:intergenic 45.0%
GGTACAAGTGCATCTACAGT+AGG + chr6_4:57216765-57216784 Msa0991630:intron 45.0%
ATCTACAGTAGGAATGGACC+TGG + chr6_4:57216776-57216795 Msa0991630:intron 45.0%
!!! CTGGCTAGGTATGCTTTTTC+CGG + chr6_4:57216795-57216814 Msa0991630:intron 45.0%
!!! TGGCTAGGTATGCTTTTTCC+GGG + chr6_4:57216796-57216815 Msa0991630:intron 45.0%
GTTGAGCAACATTGTAGGGA+TGG - chr6_4:57217457-57217476 None:intergenic 45.0%
GATGTATGCAGGTTGCTAGT+TGG + chr6_4:57217662-57217681 Msa0991630:intron 45.0%
TGTATGCAGGTTGCTAGTTG+GGG + chr6_4:57217664-57217683 Msa0991630:intron 45.0%
TGTGCTTCATGAGTATCCCT+TGG - chr6_4:57217733-57217752 None:intergenic 45.0%
GCAAAGACCCCAATAATTGC+AGG - chr6_4:57217784-57217803 None:intergenic 45.0%
!! TCAAAGGCTCTAGAAGGGAA+AGG - chr6_4:57217820-57217839 None:intergenic 45.0%
!! CCATGTCAAAGGCTCTAGAA+GGG - chr6_4:57217825-57217844 None:intergenic 45.0%
GATAGAATTCTACGTCCTGG+TGG + chr6_4:57218382-57218401 Msa0991630:CDS 45.0%
GATAGAATCCAATACCCACC+AGG - chr6_4:57218400-57218419 None:intergenic 45.0%
!! GGTGGGTATTGGATTCTATC+TGG + chr6_4:57218400-57218419 Msa0991630:CDS 45.0%
TGTCAGGGTTATTCTGCTCT+TGG - chr6_4:57218621-57218640 None:intergenic 45.0%
GCACATACCATGCTTTGTCA+GGG - chr6_4:57218636-57218655 None:intergenic 45.0%
AGCACATACCATGCTTTGTC+AGG - chr6_4:57218637-57218656 None:intergenic 45.0%
GCATTATATATGCAGGAGCG+GGG + chr6_4:57219052-57219071 Msa0991630:intron 45.0%
CATTATATATGCAGGAGCGG+GGG + chr6_4:57219053-57219072 Msa0991630:intron 45.0%
! TAAAATAAGTGGGGTGTCCG+GGG - chr6_4:57219085-57219104 None:intergenic 45.0%
! GTAAAATAAGTGGGGTGTCC+GGG - chr6_4:57219086-57219105 None:intergenic 45.0%
! GGTAAAATAAGTGGGGTGTC+CGG - chr6_4:57219087-57219106 None:intergenic 45.0%
! TTGTTGGACACTTTAGGGAG+TGG - chr6_4:57219614-57219633 None:intergenic 45.0%
GACTAAAATCAACCCCACCT+AGG + chr6_4:57219675-57219694 Msa0991630:CDS 45.0%
AACCCCACCTAGGATTTCAA+AGG + chr6_4:57219685-57219704 Msa0991630:CDS 45.0%
ACCCCACCTAGGATTTCAAA+GGG + chr6_4:57219686-57219705 Msa0991630:CDS 45.0%
!! TCCCCTTTGAAATCCTAGGT+GGG - chr6_4:57219691-57219710 None:intergenic 45.0%
!! ATGGTCCCCTTTGAAATCCT+AGG - chr6_4:57219695-57219714 None:intergenic 45.0%
GGAATGGGAGAGTCAAATTG+TGG + chr6_4:57220571-57220590 Msa0991630:CDS 45.0%
TTTCAAGAGGCCCATCTTCA+TGG - chr6_4:57220598-57220617 None:intergenic 45.0%
! ATTGTCATTTGAGGCAGGAG+AGG - chr6_4:57220657-57220676 None:intergenic 45.0%
TTCGGATGTGTATGGTGATC+TGG + chr6_4:57220800-57220819 Msa0991630:three_prime_UTR 45.0%
TGTGTATGGTGATCTGGTGT+TGG + chr6_4:57220806-57220825 Msa0991630:three_prime_UTR 45.0%
!!! ATAAAAATTTTGTAAAAATT+AGG - chr6_4:57215608-57215627 None:intergenic 5.0%
!!! TTTAATGTTATTTTTTTAAT+GGG - chr6_4:57217388-57217407 None:intergenic 5.0%
!!! ATGATTTTTTTTTTTTTAAA+GGG + chr6_4:57220014-57220033 Msa0991630:intron 5.0%
!! AGTGGAGGTACCATTTGCCA+TGG - chr6_4:57214136-57214155 None:intergenic 50.0%
!!! GAAGGGTTTTGGAGAAGTGG+AGG - chr6_4:57214151-57214170 None:intergenic 50.0%
! TTAAAGAGGGGGTGCATGGT+GGG - chr6_4:57214461-57214480 None:intergenic 50.0%
! TCAGTTAAAGAGGGGGTGCA+TGG - chr6_4:57214465-57214484 None:intergenic 50.0%
! GGGGGTGTAGTCAGTTAAAG+AGG - chr6_4:57214475-57214494 None:intergenic 50.0%
TCTGTCGCGCGTGTATTTGA+GGG - chr6_4:57214517-57214536 None:intergenic 50.0%
TTCTGTCGCGCGTGTATTTG+AGG - chr6_4:57214518-57214537 None:intergenic 50.0%
! TCTTAGGACAGTGTCGTTCG+CGG - chr6_4:57214548-57214567 None:intergenic 50.0%
TGTCGTGTTCCAGCACCAAA+CGG + chr6_4:57214585-57214604 Msa0991630:CDS 50.0%
TGTCTCTACTTGTGGGCCAT+GGG - chr6_4:57214626-57214645 None:intergenic 50.0%
ATGTCTCTACTTGTGGGCCA+TGG - chr6_4:57214627-57214646 None:intergenic 50.0%
ATGGCCCACAAGTAGAGACA+TGG + chr6_4:57214626-57214645 Msa0991630:CDS 50.0%
CCAAGCCATGTCTCTACTTG+TGG - chr6_4:57214634-57214653 None:intergenic 50.0%
CCACAAGTAGAGACATGGCT+TGG + chr6_4:57214631-57214650 Msa0991630:CDS 50.0%
! AAGTTCCGTTTTCCTGGTGG+TGG + chr6_4:57214726-57214745 Msa0991630:CDS 50.0%
GGAAACATAGTACCACCACC+AGG - chr6_4:57214741-57214760 None:intergenic 50.0%
! ACTGCTGTTGATACTGGCTG+TGG + chr6_4:57214828-57214847 Msa0991630:CDS 50.0%
! CTGCTGTTGATACTGGCTGT+GGG + chr6_4:57214829-57214848 Msa0991630:CDS 50.0%
! TGCTGTTGATACTGGCTGTG+GGG + chr6_4:57214830-57214849 Msa0991630:CDS 50.0%
CTCTCTTTCTCTGTTTGGGG+TGG + chr6_4:57214871-57214890 Msa0991630:intron 50.0%
AAATGTTAACGAGTGCCCCG+GGG - chr6_4:57216262-57216281 None:intergenic 50.0%
! CGGAAAAAGCATACCTAGCC+AGG - chr6_4:57216797-57216816 None:intergenic 50.0%
GGGATGGATCGAATCTCTGA+CGG - chr6_4:57217441-57217460 None:intergenic 50.0%
!! CCCTTCTAGAGCCTTTGACA+TGG + chr6_4:57217822-57217841 Msa0991630:CDS 50.0%
!! GCCATGTCAAAGGCTCTAGA+AGG - chr6_4:57217826-57217845 None:intergenic 50.0%
! GTTCTCGCTGCCTTATTCCA+TGG + chr6_4:57217851-57217870 Msa0991630:CDS 50.0%
! TTCTACGTCCTGGTGGGTAT+TGG + chr6_4:57218389-57218408 Msa0991630:CDS 50.0%
TATCTGGTCCACCAATTCGC+TGG + chr6_4:57218416-57218435 Msa0991630:CDS 50.0%
!! CCCCTTTGAAATCCTAGGTG+GGG - chr6_4:57219690-57219709 None:intergenic 50.0%
CCCCACCTAGGATTTCAAAG+GGG + chr6_4:57219687-57219706 Msa0991630:CDS 50.0%
!! GTCCCCTTTGAAATCCTAGG+TGG - chr6_4:57219692-57219711 None:intergenic 50.0%
! GTATGGTGATCTGGTGTTGG+AGG + chr6_4:57220809-57220828 Msa0991630:three_prime_UTR 50.0%
GTGGGGTGTGTGTGTGTGTT+TGG - chr6_4:57213904-57213923 None:intergenic 55.0%
! GTTAAAGAGGGGGTGCATGG+TGG - chr6_4:57214462-57214481 None:intergenic 55.0%
! TGTATTTGAGGGAGCGCGTG+TGG - chr6_4:57214506-57214525 None:intergenic 55.0%
CTACTTGTGGGCCATGGGAA+TGG - chr6_4:57214621-57214640 None:intergenic 55.0%
!! GGTCTTGTTAACCAGTGCCC+CGG + chr6_4:57216113-57216132 Msa0991630:intron 55.0%
! GTCTTGTTAACCAGTGCCCC+GGG + chr6_4:57216114-57216133 Msa0991630:intron 55.0%
TCTTGTTAACCAGTGCCCCG+GGG + chr6_4:57216115-57216134 Msa0991630:intron 55.0%
TGCTTCCTTAACCAGTGCCC+CGG - chr6_4:57216135-57216154 None:intergenic 55.0%
AGCTTCCTTAACCAGTGCCC+CGG + chr6_4:57216242-57216261 Msa0991630:intron 55.0%
CAGTAGGAATGGACCTGGCT+AGG + chr6_4:57216781-57216800 Msa0991630:intron 55.0%
AGCGCGTGTGGTCTTCACAG+GGG - chr6_4:57214494-57214513 None:intergenic 60.0%
GAGCGCGTGTGGTCTTCACA+GGG - chr6_4:57214495-57214514 None:intergenic 60.0%
! CTCTGTTTGGGGTGGCACGT+CGG + chr6_4:57214879-57214898 Msa0991630:intron 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - chr6_4:57216244-57216263 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - chr6_4:57216243-57216262 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG + chr6_4:57216243-57216262 Msa0991630:intron 60.0%
CTTCCTTAACCAGTGCCCCG+GGG + chr6_4:57216244-57216263 Msa0991630:intron 60.0%
GCGCGTGTGGTCTTCACAGG+GGG - chr6_4:57214493-57214512 None:intergenic 65.0%
GGAGCGCGTGTGGTCTTCAC+AGG - chr6_4:57214496-57214515 None:intergenic 65.0%
AGGAGCGGGGGTTAGAACCC+CGG + chr6_4:57219065-57219084 Msa0991630:intron 65.0%
TAACCAGTGCCCCGGGGCAC+TGG + chr6_4:57216121-57216140 Msa0991630:intron 70.0%
TAACCAGTGCCCCGGGGCAC+TGG - chr6_4:57216121-57216140 None:intergenic 70.0%
!! GTGCCCCGGGGCACTGGTTA+AGG + chr6_4:57216127-57216146 Msa0991630:intron 70.0%
!! GTGCCCCGGGGCACTGGTTA+AGG - chr6_4:57216127-57216146 None:intergenic 70.0%
TAACGAGTGCCCCGGGGCAC+TGG - chr6_4:57216256-57216275 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 57213895 57221010 57213895 ID=Msa0991630;Name=Msa0991630
chr6_4 mRNA 57213895 57221010 57213895 ID=Msa0991630-mRNA-1;Parent=Msa0991630;Name=Msa0991630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=46|1|1|1|0.83|0.71|7|325|639
chr6_4 exon 57213895 57213918 57213895 ID=Msa0991630-mRNA-1:exon:11431;Parent=Msa0991630-mRNA-1
chr6_4 exon 57214113 57214851 57214113 ID=Msa0991630-mRNA-1:exon:11432;Parent=Msa0991630-mRNA-1
chr6_4 exon 57217673 57217883 57217673 ID=Msa0991630-mRNA-1:exon:11433;Parent=Msa0991630-mRNA-1
chr6_4 exon 57218359 57218647 57218359 ID=Msa0991630-mRNA-1:exon:11434;Parent=Msa0991630-mRNA-1
chr6_4 exon 57219583 57219975 57219583 ID=Msa0991630-mRNA-1:exon:11435;Parent=Msa0991630-mRNA-1
chr6_4 exon 57220060 57220137 57220060 ID=Msa0991630-mRNA-1:exon:11436;Parent=Msa0991630-mRNA-1
chr6_4 exon 57220454 57221010 57220454 ID=Msa0991630-mRNA-1:exon:11437;Parent=Msa0991630-mRNA-1
chr6_4 five_prime_UTR 57213895 57213918 57213895 ID=Msa0991630-mRNA-1:five_prime_utr;Parent=Msa0991630-mRNA-1
chr6_4 five_prime_UTR 57214113 57214134 57214113 ID=Msa0991630-mRNA-1:five_prime_utr;Parent=Msa0991630-mRNA-1
chr6_4 CDS 57214135 57214851 57214135 ID=Msa0991630-mRNA-1:cds;Parent=Msa0991630-mRNA-1
chr6_4 CDS 57217673 57217883 57217673 ID=Msa0991630-mRNA-1:cds;Parent=Msa0991630-mRNA-1
chr6_4 CDS 57218359 57218647 57218359 ID=Msa0991630-mRNA-1:cds;Parent=Msa0991630-mRNA-1
chr6_4 CDS 57219583 57219975 57219583 ID=Msa0991630-mRNA-1:cds;Parent=Msa0991630-mRNA-1
chr6_4 CDS 57220060 57220137 57220060 ID=Msa0991630-mRNA-1:cds;Parent=Msa0991630-mRNA-1
chr6_4 CDS 57220454 57220685 57220454 ID=Msa0991630-mRNA-1:cds;Parent=Msa0991630-mRNA-1
chr6_4 three_prime_UTR 57220686 57221010 57220686 ID=Msa0991630-mRNA-1:three_prime_utr;Parent=Msa0991630-mRNA-1
Gene Sequence

>Msa0991630

ATGGCAAATGGTACCTCCACTTCTCCAAAACCCTTCAAACCCTCCAAATACACTTCCTTTTTCAACTGCAAAAAAACAAATCTTTACTCTTTCATAGCTCTTCTTTGCATCATTTCATACTTTTTAGGCTCATACCAAAACAACAGCACCTCCACATCAACTAACAAAAATATCCAAATCAAAAAAGTCACACCAAAATGTCTCCAAAAAAATCAAAATCCAAAAACAACAAACACAAAAACAAAAACAACCAACTTAGATTTCTTCTCTCATCACAACTTAACAAATCCAACAACCACATCCACAACAACATCTTCTCAATACCCACCATGCACCCCCTCTTTAACTGACTACACCCCCTGTGAAGACCACACGCGCTCCCTCAAATACACGCGCGACAGAATGATATACCGCGAACGACACTGTCCTAAGAAACATGAAATCTTAAAGTGTCGTGTTCCAGCACCAAACGGTTACAAGAATCCATTCCCATGGCCCACAAGTAGAGACATGGCTTGGTATGCAAATGTACCTTACCGTCATTTAACGGTGGAAAAAGCTGGTCAAAATTGGATACGTTTTGACGGTGATAAGTTCCGTTTTCCTGGTGGTGGTACTATGTTTCCTAATGGTGCTGATAAGTATATTGATGATATTGGGAAGTTGATTAATCTTGAAGATGGTTCTGTGAGAACTGCTGTTGATACTGGCTGTGGGGTTGCTAGTTGGGGAGCCTATCTACTATCACGTGACATATTAACAGTGTCAATTGCACCAAGGGATACTCATGAAGCACAAGTTCAATTTGCTCTTGAAAGAGGTGTTCCTGCAATTATTGGGGTCTTTGCTTCAAAGAGATTACCTTTCCCTTCTAGAGCCTTTGACATGGCACATTGTTCTCGCTGCCTTATTCCATGGCCTGAATATGATGGACTCTATCTAAATGAAGTTGATAGAATTCTACGTCCTGGTGGGTATTGGATTCTATCTGGTCCACCAATTCGCTGGAAGAAATATTGGAAAGGATGGGAAAGAACAAAAGAAGACTTGAATGAAGAGCAAACCAAAATTGAGAATGTAGCTAAAAGCCTTTGTTGGAATAAAATAGTGGAGAAAGGTGATATTGCTATTTGGCAGAAACCCAAAAATCATTTAGATTGCAAATTCACTCAAAATAGGCCTTTTTGCCAAGAGCAGAATAACCCTGACAAAGCATGGTACACAAACATGCAAACATGTTTAAATCCACTCCCTAAAGTGTCCAACAAAGAAGAAATTTCAGGTGGGGAATTAAATAATTGGCCTCAAAGACTAAAATCAACCCCACCTAGGATTTCAAAGGGGACCATTAAAGGTGTCACACCTCAAACATTCTCAAAAGACAATCAACTATGGAACAAAAGAGTATCATATTACAAAAAAGTTAACAATCAACTTGGAAAAGCTGGTAGATACAGGAACCTATTAGACATGAATGCTTATTTGGGTGGATTTGCAGCTTCACTTGTTAAATATCCTATTTGGGTTATGAATGTGGTTCCTATTCAAGCTAAAGTTGATACACTTGGAGCAATATATGAAAGAGGGTTGATTGGAATGTATCATAATTGGTGTGAAGCTATGTCTACTTATCCTAGAACTTATGACCTAATTCATGCTGATTCTGTGTTTAGCCTTTATAATGACAGATGTGAATTGGAAGACATATTGCTAGAGATGGATAGGATTCTTAGACCAGAAGGAAGTGTAATAATTAGAGATGATGTTGATATATTGGTCAAAGTAAAGAGCATAATCAATGGCTTGGAATGGGAGAGTCAAATTGTGGACCATGAAGATGGGCCTCTTGAAAGAGAGAAACTTTTATTTGCTGTGAAGAAATATTGGACCTCTCCTGCCTCAAATGACAATACTATTTAG
Protein sequence

>Msa0991630

MANGTSTSPKPFKPSKYTSFFNCKKTNLYSFIALLCIISYFLGSYQNNSTSTSTNKNIQIKKVTPKCLQKNQNPKTTNTKTKTTNLDFFSHHNLTNPTTTSTTTSSQYPPCTPSLTDYTPCEDHTRSLKYTRDRMIYRERHCPKKHEILKCRVPAPNGYKNPFPWPTSRDMAWYANVPYRHLTVEKAGQNWIRFDGDKFRFPGGGTMFPNGADKYIDDIGKLINLEDGSVRTAVDTGCGVASWGAYLLSRDILTVSIAPRDTHEAQVQFALERGVPAIIGVFASKRLPFPSRAFDMAHCSRCLIPWPEYDGLYLNEVDRILRPGGYWILSGPPIRWKKYWKGWERTKEDLNEEQTKIENVAKSLCWNKIVEKGDIAIWQKPKNHLDCKFTQNRPFCQEQNNPDKAWYTNMQTCLNPLPKVSNKEEISGGELNNWPQRLKSTPPRISKGTIKGVTPQTFSKDNQLWNKRVSYYKKVNNQLGKAGRYRNLLDMNAYLGGFAASLVKYPIWVMNVVPIQAKVDTLGAIYERGLIGMYHNWCEAMSTYPRTYDLIHADSVFSLYNDRCELEDILLEMDRILRPEGSVIIRDDVDILVKVKSIINGLEWESQIVDHEDGPLEREKLLFAVKKYWTSPASNDNTI*