Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0037660 | 0.823208 | 1.567805e-53 | -8.615850e-47 |
| Msa0029730 | Msa0037660 | 0.812148 | 4.904287e-51 | -8.615850e-47 |
| Msa0033610 | Msa0037660 | 0.816114 | 6.535281e-52 | -8.615850e-47 |
| Msa0033640 | Msa0037660 | 0.800026 | 1.748113e-48 | -8.615850e-47 |
| Msa0037660 | Msa0045620 | 0.828872 | 7.059943e-55 | -8.615850e-47 |
| Msa0037660 | Msa0050530 | 0.829545 | 4.849412e-55 | -8.615850e-47 |
| Msa0037660 | Msa0063190 | 0.814124 | 1.807042e-51 | -8.615850e-47 |
| Msa0037660 | Msa0075840 | 0.806992 | 6.281490e-50 | -8.615850e-47 |
| Msa0037660 | Msa0084990 | 0.800484 | 1.410183e-48 | -8.615850e-47 |
| Msa0037660 | Msa0091090 | -0.829635 | 4.611355e-55 | -8.615850e-47 |
| Msa0037660 | Msa0100600 | 0.835307 | 1.810837e-56 | -8.615850e-47 |
| Msa0037660 | Msa0100890 | 0.845249 | 4.570189e-59 | -8.615850e-47 |
| Msa0037660 | Msa0109730 | 0.811403 | 7.125750e-51 | -8.615850e-47 |
| Msa0037660 | Msa0118150 | 0.803962 | 2.713782e-49 | -8.615850e-47 |
| Msa0037660 | Msa0168380 | 0.807283 | 5.452009e-50 | -8.615850e-47 |
| Msa0037660 | Msa0177830 | 0.819428 | 1.167584e-52 | -8.615850e-47 |
| Msa0037660 | Msa0177970 | 0.812171 | 4.848762e-51 | -8.615850e-47 |
| Msa0037660 | Msa0183200 | -0.813462 | 2.528882e-51 | -8.615850e-47 |
| Msa0037660 | Msa0192050 | 0.804026 | 2.631876e-49 | -8.615850e-47 |
| Msa0037660 | Msa0219840 | 0.820959 | 5.205284e-53 | -8.615850e-47 |
| Msa0037660 | Msa0241040 | 0.823651 | 1.235062e-53 | -8.615850e-47 |
| Msa0037660 | Msa0276800 | -0.815884 | 7.354878e-52 | -8.615850e-47 |
| Msa0037660 | Msa0297200 | 0.812748 | 3.627289e-51 | -8.615850e-47 |
| Msa0037660 | Msa0349220 | -0.802699 | 4.956766e-49 | -8.615850e-47 |
| Msa0037660 | Msa0388250 | 0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa0037660 | Msa0416210 | 0.806680 | 7.314206e-50 | -8.615850e-47 |
| Msa0037660 | Msa0416390 | 0.826515 | 2.600747e-54 | -8.615850e-47 |
| Msa0037660 | Msa0418100 | 0.933576 | 1.519712e-95 | -8.615850e-47 |
| Msa0037660 | Msa0428330 | -0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa0037660 | Msa0433630 | 0.811534 | 6.671427e-51 | -8.615850e-47 |
| Msa0037660 | Msa0468360 | -0.803869 | 2.837837e-49 | -8.615850e-47 |
| Msa0037660 | Msa0521530 | 0.803355 | 3.626003e-49 | -8.615850e-47 |
| Msa0037660 | Msa0568290 | -0.813945 | 1.979029e-51 | -8.615850e-47 |
| Msa0037660 | Msa0572360 | 0.823938 | 1.057966e-53 | -8.615850e-47 |
| Msa0037660 | Msa0582460 | 0.806105 | 9.667111e-50 | -8.615850e-47 |
| Msa0037660 | Msa0587180 | 0.810115 | 1.353467e-50 | -8.615850e-47 |
| Msa0037660 | Msa0618990 | 0.824961 | 6.078325e-54 | -8.615850e-47 |
| Msa0037660 | Msa0623310 | 0.835325 | 1.792210e-56 | -8.615850e-47 |
| Msa0037660 | Msa0630440 | 0.829463 | 5.075421e-55 | -8.615850e-47 |
| Msa0037660 | Msa0640580 | 0.805549 | 1.265291e-49 | -8.615850e-47 |
| Msa0037660 | Msa0659020 | -0.808447 | 3.083900e-50 | -8.615850e-47 |
| Msa0037660 | Msa0663290 | 0.819538 | 1.102071e-52 | -8.615850e-47 |
| Msa0037660 | Msa0664070 | 0.808928 | 2.433132e-50 | -8.615850e-47 |
| Msa0037660 | Msa0673940 | 0.810951 | 8.928736e-51 | -8.615850e-47 |
| Msa0037660 | Msa0689830 | 0.800774 | 1.230607e-48 | -8.615850e-47 |
| Msa0037660 | Msa0705460 | 0.801562 | 8.490251e-49 | -8.615850e-47 |
| Msa0037660 | Msa0708980 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0037660 | Msa0742090 | -0.801654 | 8.130365e-49 | -8.615850e-47 |
| Msa0037660 | Msa0751720 | 0.811324 | 7.412458e-51 | -8.615850e-47 |
| Msa0037660 | Msa0761830 | 0.830266 | 3.234680e-55 | -8.615850e-47 |
| Msa0037660 | Msa0774060 | 0.816020 | 6.857721e-52 | -8.615850e-47 |
| Msa0037660 | Msa0804170 | 0.804061 | 2.587689e-49 | -8.615850e-47 |
| Msa0037660 | Msa0842180 | 0.800922 | 1.148122e-48 | -8.615850e-47 |
| Msa0037660 | Msa0846900 | 0.821827 | 3.282224e-53 | -8.615850e-47 |
| Msa0037660 | Msa0850600 | 0.802019 | 6.841914e-49 | -8.615850e-47 |
| Msa0037660 | Msa0852090 | -0.804676 | 1.926961e-49 | -8.615850e-47 |
| Msa0037660 | Msa0861440 | 0.820732 | 5.871052e-53 | -8.615850e-47 |
| Msa0037660 | Msa0870020 | 0.823642 | 1.241146e-53 | -8.615850e-47 |
| Msa0037660 | Msa0916400 | 0.801324 | 9.500739e-49 | -8.615850e-47 |
| Msa0037660 | Msa0929900 | 0.807831 | 4.170124e-50 | -8.615850e-47 |
| Msa0037660 | Msa1021560 | 0.828531 | 8.537480e-55 | -8.615850e-47 |
| Msa0037660 | Msa1024570 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0037660 | Msa1026710 | 0.817539 | 3.129761e-52 | -8.615850e-47 |
| Msa0037660 | Msa1060300 | 0.807685 | 4.479589e-50 | -8.615850e-47 |
| Msa0037660 | Msa1089870 | 0.801545 | 8.561214e-49 | -8.615850e-47 |
| Msa0037660 | Msa1105540 | 0.804735 | 1.872691e-49 | -8.615850e-47 |
| Msa0037660 | Msa1124210 | 0.801860 | 7.376719e-49 | -8.615850e-47 |
| Msa0037660 | Msa1136890 | -0.808325 | 3.274599e-50 | -8.615850e-47 |
| Msa0037660 | Msa1148930 | 0.802763 | 4.808158e-49 | -8.615850e-47 |
| Msa0037660 | Msa1183900 | 0.807838 | 4.156680e-50 | -8.615850e-47 |
| Msa0037660 | Msa1243630 | -0.830014 | 3.728175e-55 | -8.615850e-47 |
| Msa0037660 | Msa1244220 | -0.827394 | 1.602966e-54 | -8.615850e-47 |
| Msa0037660 | Msa1278030 | 0.801507 | 8.716446e-49 | -8.615850e-47 |
| Msa0037660 | Msa1282300 | 0.814014 | 1.911143e-51 | -8.615850e-47 |
| Msa0037660 | Msa1294280 | 0.802401 | 5.710295e-49 | -8.615850e-47 |
| Msa0037660 | Msa1308860 | 0.822334 | 2.503627e-53 | -8.615850e-47 |
| Msa0037660 | Msa1352580 | 0.808950 | 2.407434e-50 | -8.615850e-47 |
| Msa0037660 | Msa1371800 | 0.823855 | 1.106505e-53 | -8.615850e-47 |
| Msa0037660 | Msa1376310 | 0.832089 | 1.153188e-55 | -8.615850e-47 |
| Msa0037660 | Msa1377140 | 0.814103 | 1.826890e-51 | -8.615850e-47 |
| Msa0037660 | Msa1379940 | 0.812468 | 4.176397e-51 | -8.615850e-47 |
| Msa0037660 | Msa1381330 | 0.805656 | 1.201476e-49 | -8.615850e-47 |
| Msa0037660 | Msa1385570 | 0.829512 | 4.937816e-55 | -8.615850e-47 |
| Msa0037660 | Msa1389310 | 0.804657 | 1.944536e-49 | -8.615850e-47 |
| Msa0037660 | Msa1398460 | 0.982688 | 9.711547e-156 | -8.615850e-47 |
| Msa0037660 | Msa1413020 | 0.806487 | 8.033824e-50 | -8.615850e-47 |
| Msa0037660 | Msa1420830 | 0.829708 | 4.426441e-55 | -8.615850e-47 |
| Msa0037660 | Msa1447900 | 0.803870 | 2.836228e-49 | -8.615850e-47 |
| Msa0037660 | Msa1450630 | -0.862437 | 5.071068e-64 | -8.615850e-47 |
| Msa0037660 | Msa1453030 | 0.815650 | 8.290746e-52 | -8.615850e-47 |
| Msa0037660 | Msa1454410 | 0.802804 | 4.714246e-49 | -8.615850e-47 |
| Msa0037660 | Msa1460970 | 0.841569 | 4.388394e-58 | -8.615850e-47 |
| Msa0037660 | Msa1461260 | 0.807905 | 4.021926e-50 | -8.615850e-47 |
| Msa0037660 | Msa1462780 | 0.805133 | 1.546394e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037660 | MtrunA17_Chr3g0115701 | 99.653 | 288 | 1 | 0 | 1 | 288 | 1 | 288 | 0.0 | 580 |
| Msa0037660 | MtrunA17_Chr3g0124021 | 59.672 | 305 | 95 | 7 | 4 | 288 | 3 | 299 | 1.14e-108 | 317 |
| Msa0037660 | MtrunA17_Chr8g0382291 | 48.344 | 302 | 124 | 9 | 6 | 285 | 4 | 295 | 8.68e-72 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0037660 | AT1G35780.1 | 69.153 | 295 | 75 | 9 | 1 | 288 | 1 | 286 | 6.19e-126 | 360 |
| Msa0037660 | AT1G78150.1 | 67.241 | 290 | 77 | 4 | 1 | 288 | 1 | 274 | 2.13e-123 | 353 |
| Msa0037660 | AT1G78150.2 | 67.241 | 290 | 77 | 4 | 1 | 288 | 1 | 274 | 2.13e-123 | 353 |
| Msa0037660 | AT1G78150.3 | 61.129 | 319 | 77 | 5 | 1 | 288 | 1 | 303 | 6.10e-117 | 338 |
| Msa0037660 | AT4G39860.3 | 60.066 | 303 | 102 | 5 | 1 | 288 | 1 | 299 | 3.96e-113 | 328 |
| Msa0037660 | AT4G39860.4 | 60.066 | 303 | 102 | 5 | 1 | 288 | 1 | 299 | 3.96e-113 | 328 |
| Msa0037660 | AT4G39860.1 | 60.066 | 303 | 102 | 5 | 1 | 288 | 1 | 299 | 3.96e-113 | 328 |
| Msa0037660 | AT4G39860.2 | 59.736 | 303 | 102 | 6 | 1 | 288 | 1 | 298 | 2.13e-110 | 322 |
| Msa0037660 | AT1G35780.2 | 65.611 | 221 | 62 | 8 | 73 | 288 | 1 | 212 | 4.25e-82 | 246 |
| Msa0037660 | AT1G35780.4 | 65.611 | 221 | 62 | 8 | 73 | 288 | 1 | 212 | 4.25e-82 | 246 |
| Msa0037660 | AT1G35780.3 | 65.611 | 221 | 62 | 8 | 73 | 288 | 1 | 212 | 4.25e-82 | 246 |
| Msa0037660 | AT2G22270.1 | 43.620 | 337 | 128 | 14 | 2 | 288 | 4 | 328 | 7.65e-65 | 206 |
| Msa0037660 | AT2G22270.2 | 42.857 | 287 | 110 | 11 | 51 | 288 | 8 | 289 | 9.48e-53 | 174 |
Find 110 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTTGACCTTGTATTTC+TGG | 0.093210 | 1_1:+66776905 | Msa0037660:three_prime_UTR |
| GACCTTGTATTTCTGGGTTT+TGG | 0.124016 | 1_1:+66776912 | Msa0037660:three_prime_UTR |
| CTGACAGTTCTGCAAATTTC+TGG | 0.130552 | 1_1:-66776626 | None:intergenic |
| ATTGGCCGAGGTTTGATTTC+TGG | 0.198337 | 1_1:-66776148 | None:intergenic |
| TTCATATACTGTCTTTGTTT+TGG | 0.233802 | 1_1:+66776847 | Msa0037660:three_prime_UTR |
| ATCGATTGGACGAGTGTTAA+TGG | 0.254059 | 1_1:-66777073 | None:intergenic |
| GGGTTGGCACTGCCATCCTC+TGG | 0.261646 | 1_1:-66775799 | None:intergenic |
| TCCAGTATGCGAGGAGTAAT+TGG | 0.289565 | 1_1:-66776166 | None:intergenic |
| GATTAATATCTTGACCAAAA+AGG | 0.312653 | 1_1:+66776957 | Msa0037660:three_prime_UTR |
| TCAGGAAACAACATATTTAA+AGG | 0.318062 | 1_1:+66776645 | Msa0037660:CDS |
| TGTTCTTTGGCGTGTGAATA+TGG | 0.319007 | 1_1:+66774517 | Msa0037660:exon |
| GCCAATTACTCCTCGCATAC+TGG | 0.323326 | 1_1:+66776165 | Msa0037660:CDS |
| TTGCGCTGGTATAATTTGTT+AGG | 0.345832 | 1_1:+66776814 | Msa0037660:exon |
| GCTTGCTTAATGAAGTGATT+TGG | 0.352725 | 1_1:+66777027 | Msa0037660:three_prime_UTR |
| TAAGGTGGTGTTTGGTGGTC+AGG | 0.358985 | 1_1:+66774787 | Msa0037660:CDS |
| TATTAATCAAGGAACCTAAA+AGG | 0.361392 | 1_1:-66776942 | None:intergenic |
| TTATTTGACCTTGTATTTCT+GGG | 0.366244 | 1_1:+66776906 | Msa0037660:three_prime_UTR |
| GGGATCAGTAAGGTGGTGTT+TGG | 0.367307 | 1_1:+66774779 | Msa0037660:CDS |
| TACCTGGTACATGCGAATTC+CGG | 0.384648 | 1_1:-66775836 | None:intergenic |
| TAAAGGCGACTCTCCACCTT+TGG | 0.396203 | 1_1:+66776662 | Msa0037660:CDS |
| GGTTGGCACTGCCATCCTCT+GGG | 0.400803 | 1_1:-66775798 | None:intergenic |
| TATAAGATGAAGGAGATTAC+TGG | 0.401416 | 1_1:+66775739 | Msa0037660:CDS |
| TCACGCTGCTTGGCCACCTC+AGG | 0.402765 | 1_1:-66776025 | None:intergenic |
| CAACTGCAGATCTACTTGTT+TGG | 0.409333 | 1_1:+66774573 | Msa0037660:CDS |
| TTCCGCCACTCGTTCTCATC+AGG | 0.416604 | 1_1:+66774634 | Msa0037660:CDS |
| TCCACTGAGCTCACGCTGCT+TGG | 0.434899 | 1_1:-66776035 | None:intergenic |
| TTTGGTCAAGATATTAATCA+AGG | 0.435079 | 1_1:-66776953 | None:intergenic |
| AAATTGCAGCAAGCTATTGC+GGG | 0.436764 | 1_1:+66775941 | Msa0037660:intron |
| AATTTCTAGAAAGCCTTGTT+CGG | 0.448306 | 1_1:+66775714 | Msa0037660:intron |
| AACCCTTCTGCAAATAAAAC+CGG | 0.449099 | 1_1:+66775817 | Msa0037660:CDS |
| GGAATCAGTCATATCTCCTT+TGG | 0.451670 | 1_1:+66775962 | Msa0037660:CDS |
| CAGAAATTTGCAGAACTGTC+AGG | 0.455797 | 1_1:+66776627 | Msa0037660:CDS |
| TGGGGCCTCATCTTCTCCAT+TGG | 0.457851 | 1_1:-66775779 | None:intergenic |
| GGAGATCAAGATGCTACTAC+AGG | 0.459580 | 1_1:+66776567 | Msa0037660:CDS |
| GCAATGCTGCTCTCGCCACC+AGG | 0.462130 | 1_1:-66776795 | None:intergenic |
| GAACAAGAGAGAAAAGATAG+TGG | 0.472673 | 1_1:-66774499 | None:intergenic |
| AACAAGAGAGAAAAGATAGT+GGG | 0.474343 | 1_1:-66774498 | None:intergenic |
| GCAAAACTCCGAGAGATAAG+TGG | 0.475331 | 1_1:+66776708 | Msa0037660:CDS |
| ATGAAGGAGATTACTGGTAG+TGG | 0.479857 | 1_1:+66775745 | Msa0037660:CDS |
| ATCAGTAAGGTGGTGTTTGG+TGG | 0.488066 | 1_1:+66774782 | Msa0037660:CDS |
| GCGGAGTCTAGAGACTATCT+AGG | 0.489892 | 1_1:+66776756 | Msa0037660:CDS |
| GCCACCTCAGGCAATGAAGC+AGG | 0.491990 | 1_1:-66776013 | None:intergenic |
| GTGGCGGAAGAAGGAGGAGC+TGG | 0.495714 | 1_1:-66774620 | None:intergenic |
| GGAGCTGGAGAATCATTGAT+TGG | 0.497326 | 1_1:-66774605 | None:intergenic |
| GAGACTATCTAGGCGGCGTA+CGG | 0.501215 | 1_1:+66776766 | Msa0037660:CDS |
| TTGAAAGGGAGCATAGGCCT+TGG | 0.501700 | 1_1:+66776190 | Msa0037660:CDS |
| CTCGCATACTGGAGTTGAAA+GGG | 0.507435 | 1_1:+66776176 | Msa0037660:CDS |
| TGGCGAGAGCAGCATTGCGC+TGG | 0.511766 | 1_1:+66776800 | Msa0037660:CDS |
| TTAATATTTATATATAGTAC+AGG | 0.511879 | 1_1:+66774312 | Msa0037660:five_prime_UTR |
| TGTTACCTTGATTAGGGTGA+TGG | 0.512492 | 1_1:+66776546 | Msa0037660:intron |
| CGAGGTTTGATTTCTGGTGG+TGG | 0.514488 | 1_1:-66776142 | None:intergenic |
| GGCGGCGTACGGAAGCCGCC+TGG | 0.516854 | 1_1:+66776777 | Msa0037660:CDS |
| TGAGAACGAGTGGCGGAAGA+AGG | 0.518411 | 1_1:-66774629 | None:intergenic |
| TGGAGAGGAACACACCGGTC+AGG | 0.525988 | 1_1:+66774537 | Msa0037660:CDS |
| GGGAGTAACATCTTTGCTGA+TGG | 0.529787 | 1_1:+66776729 | Msa0037660:CDS |
| AAAATTGCAGCAAGCTATTG+CGG | 0.532841 | 1_1:+66775940 | Msa0037660:intron |
| GCAAAGTGCAAGGAGCTTAG+TGG | 0.534359 | 1_1:+66776103 | Msa0037660:CDS |
| GAAGTGTGTGGTTTCCTGAC+CGG | 0.535007 | 1_1:-66774551 | None:intergenic |
| GAAGATGAGGCCCCAGAGGA+TGG | 0.538465 | 1_1:+66775787 | Msa0037660:CDS |
| AACCGGAATTCGCATGTACC+AGG | 0.538686 | 1_1:+66775834 | Msa0037660:CDS |
| GTGTTAATGGAAATAATCAA+TGG | 0.549038 | 1_1:-66777060 | None:intergenic |
| GCCTGCTTCATTGCCTGAGG+TGG | 0.550736 | 1_1:+66776012 | Msa0037660:CDS |
| ATGCGAGGAGTAATTGGCCG+AGG | 0.557491 | 1_1:-66776160 | None:intergenic |
| AACACTCTCTTCCTCGCCAA+AGG | 0.557790 | 1_1:-66775978 | None:intergenic |
| AGTGGAATATTTGTAGCCAA+TGG | 0.558445 | 1_1:+66775763 | Msa0037660:CDS |
| AGGTTGAGAGCTTAAACAAA+CGG | 0.563427 | 1_1:+66774822 | Msa0037660:CDS |
| TGTTACTCCCACTTATCTCT+CGG | 0.571485 | 1_1:-66776716 | None:intergenic |
| ACAAGAGAGAAAAGATAGTG+GGG | 0.571498 | 1_1:-66774497 | None:intergenic |
| TTGTTCGGAGTATAAGATGA+AGG | 0.575022 | 1_1:+66775729 | Msa0037660:CDS |
| CCTCGCATACTGGAGTTGAA+AGG | 0.579755 | 1_1:+66776175 | Msa0037660:CDS |
| TTCATCTTATACTCCGAACA+AGG | 0.583995 | 1_1:-66775727 | None:intergenic |
| GGAGTAACATCTTTGCTGAT+GGG | 0.589979 | 1_1:+66776730 | Msa0037660:CDS |
| TCCCAAAACCCAGAAATACA+AGG | 0.590755 | 1_1:-66776914 | None:intergenic |
| TAACATCTTTGCTGATGGGA+AGG | 0.591975 | 1_1:+66776734 | Msa0037660:CDS |
| GTTGGCACTGCCATCCTCTG+GGG | 0.593210 | 1_1:-66775797 | None:intergenic |
| GAACGAGTGGCGGAAGAAGG+AGG | 0.593909 | 1_1:-66774626 | None:intergenic |
| GCGTGAGCTCAGTGGAACAA+TGG | 0.596230 | 1_1:+66776042 | Msa0037660:CDS |
| GATTTCTCAGCAGCCAAAGG+TGG | 0.597007 | 1_1:-66776675 | None:intergenic |
| CTGGAGTTGAAAGGGAGCAT+AGG | 0.598124 | 1_1:+66776184 | Msa0037660:CDS |
| CTGCTGAGAAATCATTGAGT+GGG | 0.598754 | 1_1:+66776685 | Msa0037660:CDS |
| AACAAACAACCAATTAGCAA+TGG | 0.599628 | 1_1:-66776981 | None:intergenic |
| GCTTTCTGATGCAAAGTGCA+AGG | 0.600086 | 1_1:+66776093 | Msa0037660:CDS |
| GGCCGAGGTTTGATTTCTGG+TGG | 0.601150 | 1_1:-66776145 | None:intergenic |
| CAAAACTCCGAGAGATAAGT+GGG | 0.610976 | 1_1:+66776709 | Msa0037660:CDS |
| ATGCTGCTCTCGCCACCAGG+CGG | 0.612447 | 1_1:-66776792 | None:intergenic |
| GAGATCAAGATGCTACTACA+GGG | 0.614754 | 1_1:+66776568 | Msa0037660:CDS |
| CATCTTTGCTGATGGGAAGG+CGG | 0.619726 | 1_1:+66776737 | Msa0037660:CDS |
| TGCATACATGACTTTCTCCA+AGG | 0.621174 | 1_1:-66776207 | None:intergenic |
| TGTAGCCAATGGAGAAGATG+AGG | 0.623609 | 1_1:+66775774 | Msa0037660:CDS |
| GCCGTCGGATGGGATCAGTA+AGG | 0.631418 | 1_1:+66774769 | Msa0037660:intron |
| AATGATTTCTCAGCAGCCAA+AGG | 0.633502 | 1_1:-66776678 | None:intergenic |
| GCCAAGCAGCGTGAGCTCAG+TGG | 0.638579 | 1_1:+66776034 | Msa0037660:CDS |
| TGGTCAGGTTACTGATGAAG+AGG | 0.639819 | 1_1:+66774802 | Msa0037660:CDS |
| CCTTTCAACTCCAGTATGCG+AGG | 0.640438 | 1_1:-66776175 | None:intergenic |
| CACCACCAGAAATCAAACCT+CGG | 0.641332 | 1_1:+66776143 | Msa0037660:CDS |
| AAAGCCTGCTTCATTGCCTG+AGG | 0.644684 | 1_1:+66776009 | Msa0037660:CDS |
| GGCGTACGGAAGCCGCCTGG+TGG | 0.647825 | 1_1:+66776780 | Msa0037660:CDS |
| CAGTCATATCTCCTTTGGCG+AGG | 0.651432 | 1_1:+66775967 | Msa0037660:CDS |
| TACCTGATGAGAACGAGTGG+CGG | 0.652182 | 1_1:-66774636 | None:intergenic |
| GTCGGATGGGATCAGTAAGG+TGG | 0.653944 | 1_1:+66774772 | Msa0037660:CDS |
| GCTGCTGAGAAATCATTGAG+TGG | 0.655595 | 1_1:+66776684 | Msa0037660:CDS |
| TGGAGAAGATGAGGCCCCAG+AGG | 0.662591 | 1_1:+66775783 | Msa0037660:CDS |
| ACCTTACTGATCCCATCCGA+CGG | 0.677868 | 1_1:-66774770 | None:intergenic |
| TTTGGCGTGTGAATATGGAG+AGG | 0.686240 | 1_1:+66774522 | Msa0037660:exon |
| AGATCTGCAGTTGAAGTGTG+TGG | 0.688104 | 1_1:-66774563 | None:intergenic |
| ACTTACCTGATGAGAACGAG+TGG | 0.690550 | 1_1:-66774639 | None:intergenic |
| AGATCAAGATGCTACTACAG+GGG | 0.694326 | 1_1:+66776569 | Msa0037660:CDS |
| TGCTGAGAAATCATTGAGTG+GGG | 0.706728 | 1_1:+66776686 | Msa0037660:CDS |
| GAATATGGAGAGGAACACAC+CGG | 0.761577 | 1_1:+66774532 | Msa0037660:exon |
| GAGTCTAGAGACTATCTAGG+CGG | 0.855715 | 1_1:+66776759 | Msa0037660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATTTATATATAGTAC+AGG | + | chr1_1:66774312-66774331 | Msa0037660:five_prime_UTR | 10.0% |
| !!! | CTTATGATTTTATTTTTGTT+TGG | + | chr1_1:66774728-66774747 | Msa0037660:intron | 15.0% |
| !! | ATTTGAATTAGCTAAAAATA+AGG | - | chr1_1:66774866-66774885 | None:intergenic | 15.0% |
| !!! | TGGTTTTAATTAATTTTTAG+TGG | + | chr1_1:66776867-66776886 | Msa0037660:three_prime_UTR | 15.0% |
| !!! | GGTTTTAATTAATTTTTAGT+GGG | + | chr1_1:66776868-66776887 | Msa0037660:three_prime_UTR | 15.0% |
| !!! | GTTTTAATTAATTTTTAGTG+GGG | + | chr1_1:66776869-66776888 | Msa0037660:three_prime_UTR | 15.0% |
| !!! | TTTATTTTTGTTTGGTTGAT+TGG | + | chr1_1:66774736-66774755 | Msa0037660:intron | 20.0% |
| !! | ATAAAAATAAATACCTGTCA+CGG | + | chr1_1:66774925-66774944 | Msa0037660:intron | 20.0% |
| !!! | TCTGTTATTTACTATCTAAT+AGG | + | chr1_1:66775097-66775116 | Msa0037660:intron | 20.0% |
| !! | TTATTTACTATCTAATAGGA+AGG | + | chr1_1:66775101-66775120 | Msa0037660:intron | 20.0% |
| !! | TAAAAGCTTAAATATGTGTT+TGG | + | chr1_1:66775580-66775599 | Msa0037660:intron | 20.0% |
| !!! | CTCAATTTTTGTATCATTTA+TGG | + | chr1_1:66775610-66775629 | Msa0037660:intron | 20.0% |
| !!! | GATCCAAATTTTAAAATTGA+GGG | - | chr1_1:66776295-66776314 | None:intergenic | 20.0% |
| !!! | TGATCCAAATTTTAAAATTG+AGG | - | chr1_1:66776296-66776315 | None:intergenic | 20.0% |
| !!! | TTTTAAAGAGTTTAGTTGAG+TGG | - | chr1_1:66774471-66774490 | None:intergenic | 25.0% |
| !!! | ATCTAATAGGAAGGTATTAT+AGG | + | chr1_1:66775110-66775129 | Msa0037660:intron | 25.0% |
| !! | ATGTGGGATTATATTGTTTT+CGG | - | chr1_1:66775357-66775376 | None:intergenic | 25.0% |
| ! | AGCTATTAGTATCACATATA+GGG | + | chr1_1:66775379-66775398 | Msa0037660:intron | 25.0% |
| !! | GTATAGTTTTTCCTAAATTG+CGG | + | chr1_1:66775407-66775426 | Msa0037660:intron | 25.0% |
| ! | AACACCAAAACAAATTCATA+AGG | - | chr1_1:66775693-66775712 | None:intergenic | 25.0% |
| !!! | AGACTATCATATTTTTGCAA+TGG | + | chr1_1:66775881-66775900 | Msa0037660:intron | 25.0% |
| !! | TTGCTAACTTGAATTGTTTT+GGG | + | chr1_1:66776240-66776259 | Msa0037660:intron | 25.0% |
| !!! | TCACCCTCAATTTTAAAATT+TGG | + | chr1_1:66776289-66776308 | Msa0037660:intron | 25.0% |
| !! | GTTCATATAGTACTTTGTTT+AGG | + | chr1_1:66776347-66776366 | Msa0037660:intron | 25.0% |
| !! | ATAACTATAGCTTTTCGTTT+CGG | - | chr1_1:66776399-66776418 | None:intergenic | 25.0% |
| ! | TCAGGAAACAACATATTTAA+AGG | + | chr1_1:66776645-66776664 | Msa0037660:CDS | 25.0% |
| !!! | TTCATATACTGTCTTTGTTT+TGG | + | chr1_1:66776847-66776866 | Msa0037660:three_prime_UTR | 25.0% |
| ! | ATTATTTGACCTTGTATTTC+TGG | + | chr1_1:66776905-66776924 | Msa0037660:three_prime_UTR | 25.0% |
| ! | TTATTTGACCTTGTATTTCT+GGG | + | chr1_1:66776906-66776925 | Msa0037660:three_prime_UTR | 25.0% |
| ! | TATTAATCAAGGAACCTAAA+AGG | - | chr1_1:66776945-66776964 | None:intergenic | 25.0% |
| ! | TTTGGTCAAGATATTAATCA+AGG | - | chr1_1:66776956-66776975 | None:intergenic | 25.0% |
| ! | GATTAATATCTTGACCAAAA+AGG | + | chr1_1:66776957-66776976 | Msa0037660:three_prime_UTR | 25.0% |
| !! | TCATAATCATGTGTTTTCTT+CGG | + | chr1_1:66777003-66777022 | Msa0037660:three_prime_UTR | 25.0% |
| AACAAGAGAGAAAAGATAGT+GGG | - | chr1_1:66774501-66774520 | None:intergenic | 30.0% | |
| ! | ATCTTTTCTCTCTTGTTCTT+TGG | + | chr1_1:66774504-66774523 | Msa0037660:five_prime_UTR | 30.0% |
| ACGTAACATTTCGTTGTTAT+TGG | + | chr1_1:66774675-66774694 | Msa0037660:intron | 30.0% | |
| !!! | TTTTTTTGTTCCGTTGTTTC+AGG | + | chr1_1:66774956-66774975 | Msa0037660:intron | 30.0% |
| ACAAACAAAACCTGAAACAA+CGG | - | chr1_1:66774969-66774988 | None:intergenic | 30.0% | |
| !! | GAAGGTATTATAGGTGAAAA+GGG | + | chr1_1:66775119-66775138 | Msa0037660:intron | 30.0% |
| TATAGGTGAAAAGGGTTAAA+TGG | + | chr1_1:66775127-66775146 | Msa0037660:intron | 30.0% | |
| AGTTGTTGAATTTCAATGAG+TGG | + | chr1_1:66775160-66775179 | Msa0037660:intron | 30.0% | |
| AATTTCAATGAGTGGATCTA+TGG | + | chr1_1:66775168-66775187 | Msa0037660:intron | 30.0% | |
| GCTACTCTAAATGGTAAAAA+TGG | - | chr1_1:66775236-66775255 | None:intergenic | 30.0% | |
| GAAATCACATTTGCAACATT+GGG | + | chr1_1:66775256-66775275 | Msa0037660:intron | 30.0% | |
| TGATACTAATAGCTCAATGT+GGG | - | chr1_1:66775373-66775392 | None:intergenic | 30.0% | |
| GAGCTATTAGTATCACATAT+AGG | + | chr1_1:66775378-66775397 | Msa0037660:intron | 30.0% | |
| GACTATACGATATTGTGATT+TGG | + | chr1_1:66775438-66775457 | Msa0037660:intron | 30.0% | |
| ! | ATGATTTTGCCTAAATTGTC+CGG | + | chr1_1:66775476-66775495 | Msa0037660:intron | 30.0% |
| ! | CTAAAAGGCAAAAGTATGTT+TGG | - | chr1_1:66775537-66775556 | None:intergenic | 30.0% |
| ! | AAGCTTTTAATAAAGCAGCA+GGG | - | chr1_1:66775569-66775588 | None:intergenic | 30.0% |
| ! | TAAGCTTTTAATAAAGCAGC+AGG | - | chr1_1:66775570-66775589 | None:intergenic | 30.0% |
| ! | ATGGACTGAACTTATAATCT+TGG | + | chr1_1:66775629-66775648 | Msa0037660:intron | 30.0% |
| CTGAACTTATAATCTTGGAA+CGG | + | chr1_1:66775634-66775653 | Msa0037660:intron | 30.0% | |
| !! | TGTGCCTTATGAATTTGTTT+TGG | + | chr1_1:66775686-66775705 | Msa0037660:intron | 30.0% |
| !! | AATTTCTAGAAAGCCTTGTT+CGG | + | chr1_1:66775714-66775733 | Msa0037660:intron | 30.0% |
| TATAAGATGAAGGAGATTAC+TGG | + | chr1_1:66775739-66775758 | Msa0037660:CDS | 30.0% | |
| TACAATAAACGCAATATACC+TGG | - | chr1_1:66775855-66775874 | None:intergenic | 30.0% | |
| ! | TTCAAGTTAGCAACTTATAG+TGG | - | chr1_1:66776233-66776252 | None:intergenic | 30.0% |
| ! | GTTGCTAACTTGAATTGTTT+TGG | + | chr1_1:66776239-66776258 | Msa0037660:intron | 30.0% |
| AAGCTATAGTTATTGCATCA+TGG | + | chr1_1:66776406-66776425 | Msa0037660:intron | 30.0% | |
| GGTAACAACAACACAATAAA+TGG | - | chr1_1:66776533-66776552 | None:intergenic | 30.0% | |
| ! | TGTTGTTGTTACCTTGATTA+GGG | + | chr1_1:66776540-66776559 | Msa0037660:intron | 30.0% |
| AACAAACAACCAATTAGCAA+TGG | - | chr1_1:66776984-66777003 | None:intergenic | 30.0% | |
| ACAAGAGAGAAAAGATAGTG+GGG | - | chr1_1:66774500-66774519 | None:intergenic | 35.0% | |
| GAACAAGAGAGAAAAGATAG+TGG | - | chr1_1:66774502-66774521 | None:intergenic | 35.0% | |
| CATAAGCAATTGAACTCAAG+CGG | - | chr1_1:66774714-66774733 | None:intergenic | 35.0% | |
| AGGTTGAGAGCTTAAACAAA+CGG | + | chr1_1:66774822-66774841 | Msa0037660:CDS | 35.0% | |
| !! | GGAAGGTATTATAGGTGAAA+AGG | + | chr1_1:66775118-66775137 | Msa0037660:intron | 35.0% |
| TGTGATTTCGCTACTCTAAA+TGG | - | chr1_1:66775245-66775264 | None:intergenic | 35.0% | |
| CGAAATCACATTTGCAACAT+TGG | + | chr1_1:66775255-66775274 | Msa0037660:intron | 35.0% | |
| GTGATACTAATAGCTCAATG+TGG | - | chr1_1:66775374-66775393 | None:intergenic | 35.0% | |
| ACATAAACAAAACGTGCTAC+CGG | - | chr1_1:66775498-66775517 | None:intergenic | 35.0% | |
| ! | CAAAAGTATGTTTGGATTCG+TGG | - | chr1_1:66775529-66775548 | None:intergenic | 35.0% |
| TTCATCTTATACTCCGAACA+AGG | - | chr1_1:66775730-66775749 | None:intergenic | 35.0% | |
| TTGTTCGGAGTATAAGATGA+AGG | + | chr1_1:66775729-66775748 | Msa0037660:CDS | 35.0% | |
| AGTGGAATATTTGTAGCCAA+TGG | + | chr1_1:66775763-66775782 | Msa0037660:CDS | 35.0% | |
| AACCCTTCTGCAAATAAAAC+CGG | + | chr1_1:66775817-66775836 | Msa0037660:CDS | 35.0% | |
| !!! | TTCCGGTTTTATTTGCAGAA+GGG | - | chr1_1:66775822-66775841 | None:intergenic | 35.0% |
| !!! | ATTCCGGTTTTATTTGCAGA+AGG | - | chr1_1:66775823-66775842 | None:intergenic | 35.0% |
| AAAATTGCAGCAAGCTATTG+CGG | + | chr1_1:66775940-66775959 | Msa0037660:intron | 35.0% | |
| ! | GTGTTGTTGTTACCTTGATT+AGG | + | chr1_1:66776539-66776558 | Msa0037660:intron | 35.0% |
| !!! | TTCTTTGCTGTTTTCAGAAC+TGG | - | chr1_1:66776597-66776616 | None:intergenic | 35.0% |
| !! | TTGCGCTGGTATAATTTGTT+AGG | + | chr1_1:66776814-66776833 | Msa0037660:exon | 35.0% |
| !!! | ACCTTGTATTTCTGGGTTTT+GGG | + | chr1_1:66776913-66776932 | Msa0037660:three_prime_UTR | 35.0% |
| !!! | GTTTTGGGAATTTGCCTTTT+AGG | + | chr1_1:66776928-66776947 | Msa0037660:three_prime_UTR | 35.0% |
| ! | CAATTAGCAATGGTCCTTTT+TGG | - | chr1_1:66776974-66776993 | None:intergenic | 35.0% |
| CAAAAAGGACCATTGCTAAT+TGG | + | chr1_1:66776972-66776991 | Msa0037660:three_prime_UTR | 35.0% | |
| GCTTGCTTAATGAAGTGATT+TGG | + | chr1_1:66777027-66777046 | Msa0037660:three_prime_UTR | 35.0% | |
| TGTTCTTTGGCGTGTGAATA+TGG | + | chr1_1:66774517-66774536 | Msa0037660:exon | 40.0% | |
| CAACTGCAGATCTACTTGTT+TGG | + | chr1_1:66774573-66774592 | Msa0037660:CDS | 40.0% | |
| ! | ATTGGTGAATTTTCAGCCGT+CGG | + | chr1_1:66774754-66774773 | Msa0037660:intron | 40.0% |
| TCACATTTGCAACATTGGGT+TGG | + | chr1_1:66775260-66775279 | Msa0037660:intron | 40.0% | |
| GCAGGGCAGATTAAACTAAA+AGG | - | chr1_1:66775552-66775571 | None:intergenic | 40.0% | |
| ! | AATCTTGGAACGGTTTTGCT+TGG | + | chr1_1:66775644-66775663 | Msa0037660:intron | 40.0% |
| ATGAAGGAGATTACTGGTAG+TGG | + | chr1_1:66775745-66775764 | Msa0037660:CDS | 40.0% | |
| !!! | GGTTTTATTTGCAGAAGGGT+TGG | - | chr1_1:66775818-66775837 | None:intergenic | 40.0% |
| AAATTGCAGCAAGCTATTGC+GGG | + | chr1_1:66775941-66775960 | Msa0037660:intron | 40.0% | |
| GGAATCAGTCATATCTCCTT+TGG | + | chr1_1:66775962-66775981 | Msa0037660:CDS | 40.0% | |
| TGCATACATGACTTTCTCCA+AGG | - | chr1_1:66776210-66776229 | None:intergenic | 40.0% | |
| TGTTACCTTGATTAGGGTGA+TGG | + | chr1_1:66776546-66776565 | Msa0037660:intron | 40.0% | |
| GAGATCAAGATGCTACTACA+GGG | + | chr1_1:66776568-66776587 | Msa0037660:CDS | 40.0% | |
| AGATCAAGATGCTACTACAG+GGG | + | chr1_1:66776569-66776588 | Msa0037660:CDS | 40.0% | |
| CTGACAGTTCTGCAAATTTC+TGG | - | chr1_1:66776629-66776648 | None:intergenic | 40.0% | |
| CAGAAATTTGCAGAACTGTC+AGG | + | chr1_1:66776627-66776646 | Msa0037660:CDS | 40.0% | |
| AATGATTTCTCAGCAGCCAA+AGG | - | chr1_1:66776681-66776700 | None:intergenic | 40.0% | |
| CTGCTGAGAAATCATTGAGT+GGG | + | chr1_1:66776685-66776704 | Msa0037660:CDS | 40.0% | |
| TGCTGAGAAATCATTGAGTG+GGG | + | chr1_1:66776686-66776705 | Msa0037660:CDS | 40.0% | |
| CAAAACTCCGAGAGATAAGT+GGG | + | chr1_1:66776709-66776728 | Msa0037660:CDS | 40.0% | |
| TGTTACTCCCACTTATCTCT+CGG | - | chr1_1:66776719-66776738 | None:intergenic | 40.0% | |
| GGAGTAACATCTTTGCTGAT+GGG | + | chr1_1:66776730-66776749 | Msa0037660:CDS | 40.0% | |
| TAACATCTTTGCTGATGGGA+AGG | + | chr1_1:66776734-66776753 | Msa0037660:CDS | 40.0% | |
| !!! | GACCTTGTATTTCTGGGTTT+TGG | + | chr1_1:66776912-66776931 | Msa0037660:three_prime_UTR | 40.0% |
| TCCCAAAACCCAGAAATACA+AGG | - | chr1_1:66776917-66776936 | None:intergenic | 40.0% | |
| TTTGGCGTGTGAATATGGAG+AGG | + | chr1_1:66774522-66774541 | Msa0037660:exon | 45.0% | |
| GAATATGGAGAGGAACACAC+CGG | + | chr1_1:66774532-66774551 | Msa0037660:exon | 45.0% | |
| AGATCTGCAGTTGAAGTGTG+TGG | - | chr1_1:66774566-66774585 | None:intergenic | 45.0% | |
| GGAGCTGGAGAATCATTGAT+TGG | - | chr1_1:66774608-66774627 | None:intergenic | 45.0% | |
| ACTTACCTGATGAGAACGAG+TGG | - | chr1_1:66774642-66774661 | None:intergenic | 45.0% | |
| ! | TGAATTTTCAGCCGTCGGAT+GGG | + | chr1_1:66774759-66774778 | Msa0037660:intron | 45.0% |
| ATCAGTAAGGTGGTGTTTGG+TGG | + | chr1_1:66774782-66774801 | Msa0037660:CDS | 45.0% | |
| TGGTCAGGTTACTGATGAAG+AGG | + | chr1_1:66774802-66774821 | Msa0037660:CDS | 45.0% | |
| AAAAACACACAGACCGTGAC+AGG | - | chr1_1:66774941-66774960 | None:intergenic | 45.0% | |
| GTCTTGTGCTACCGCAATTT+AGG | - | chr1_1:66775421-66775440 | None:intergenic | 45.0% | |
| AACGTGCTACCGGACAATTT+AGG | - | chr1_1:66775488-66775507 | None:intergenic | 45.0% | |
| TGTAGCCAATGGAGAAGATG+AGG | + | chr1_1:66775774-66775793 | Msa0037660:CDS | 45.0% | |
| TACCTGGTACATGCGAATTC+CGG | - | chr1_1:66775839-66775858 | None:intergenic | 45.0% | |
| !!! | GGCAATGAAGCAGGCTTTTT+TGG | - | chr1_1:66776007-66776026 | None:intergenic | 45.0% |
| GCTTTCTGATGCAAAGTGCA+AGG | + | chr1_1:66776093-66776112 | Msa0037660:CDS | 45.0% | |
| CACCACCAGAAATCAAACCT+CGG | + | chr1_1:66776143-66776162 | Msa0037660:CDS | 45.0% | |
| ! | ATTGGCCGAGGTTTGATTTC+TGG | - | chr1_1:66776151-66776170 | None:intergenic | 45.0% |
| TCCAGTATGCGAGGAGTAAT+TGG | - | chr1_1:66776169-66776188 | None:intergenic | 45.0% | |
| CTCGCATACTGGAGTTGAAA+GGG | + | chr1_1:66776176-66776195 | Msa0037660:CDS | 45.0% | |
| GATCTCCATCACCCTAATCA+AGG | - | chr1_1:66776554-66776573 | None:intergenic | 45.0% | |
| GGAGATCAAGATGCTACTAC+AGG | + | chr1_1:66776567-66776586 | Msa0037660:CDS | 45.0% | |
| GCTGCTGAGAAATCATTGAG+TGG | + | chr1_1:66776684-66776703 | Msa0037660:CDS | 45.0% | |
| GCAAAACTCCGAGAGATAAG+TGG | + | chr1_1:66776708-66776727 | Msa0037660:CDS | 45.0% | |
| GGGAGTAACATCTTTGCTGA+TGG | + | chr1_1:66776729-66776748 | Msa0037660:CDS | 45.0% | |
| GAGTCTAGAGACTATCTAGG+CGG | + | chr1_1:66776759-66776778 | Msa0037660:CDS | 45.0% | |
| GAAGTGTGTGGTTTCCTGAC+CGG | - | chr1_1:66774554-66774573 | None:intergenic | 50.0% | |
| TACCTGATGAGAACGAGTGG+CGG | - | chr1_1:66774639-66774658 | None:intergenic | 50.0% | |
| ! | GTGAATTTTCAGCCGTCGGA+TGG | + | chr1_1:66774758-66774777 | Msa0037660:intron | 50.0% |
| ACCTTACTGATCCCATCCGA+CGG | - | chr1_1:66774773-66774792 | None:intergenic | 50.0% | |
| GGGATCAGTAAGGTGGTGTT+TGG | + | chr1_1:66774779-66774798 | Msa0037660:CDS | 50.0% | |
| ! | TAAGGTGGTGTTTGGTGGTC+AGG | + | chr1_1:66774787-66774806 | Msa0037660:CDS | 50.0% |
| AACCGGAATTCGCATGTACC+AGG | + | chr1_1:66775834-66775853 | Msa0037660:CDS | 50.0% | |
| CAGTCATATCTCCTTTGGCG+AGG | + | chr1_1:66775967-66775986 | Msa0037660:CDS | 50.0% | |
| AACACTCTCTTCCTCGCCAA+AGG | - | chr1_1:66775981-66776000 | None:intergenic | 50.0% | |
| AAAGCCTGCTTCATTGCCTG+AGG | + | chr1_1:66776009-66776028 | Msa0037660:CDS | 50.0% | |
| GCAAAGTGCAAGGAGCTTAG+TGG | + | chr1_1:66776103-66776122 | Msa0037660:CDS | 50.0% | |
| !! | CGAGGTTTGATTTCTGGTGG+TGG | - | chr1_1:66776145-66776164 | None:intergenic | 50.0% |
| GCCAATTACTCCTCGCATAC+TGG | + | chr1_1:66776165-66776184 | Msa0037660:CDS | 50.0% | |
| CCTTTCAACTCCAGTATGCG+AGG | - | chr1_1:66776178-66776197 | None:intergenic | 50.0% | |
| CCTCGCATACTGGAGTTGAA+AGG | + | chr1_1:66776175-66776194 | Msa0037660:CDS | 50.0% | |
| ! | CTGGAGTTGAAAGGGAGCAT+AGG | + | chr1_1:66776184-66776203 | Msa0037660:CDS | 50.0% |
| ! | TTGAAAGGGAGCATAGGCCT+TGG | + | chr1_1:66776190-66776209 | Msa0037660:CDS | 50.0% |
| TAAAGGCGACTCTCCACCTT+TGG | + | chr1_1:66776662-66776681 | Msa0037660:CDS | 50.0% | |
| GATTTCTCAGCAGCCAAAGG+TGG | - | chr1_1:66776678-66776697 | None:intergenic | 50.0% | |
| CATCTTTGCTGATGGGAAGG+CGG | + | chr1_1:66776737-66776756 | Msa0037660:CDS | 50.0% | |
| GCGGAGTCTAGAGACTATCT+AGG | + | chr1_1:66776756-66776775 | Msa0037660:CDS | 50.0% | |
| ! | TGAGAACGAGTGGCGGAAGA+AGG | - | chr1_1:66774632-66774651 | None:intergenic | 55.0% |
| TTCCGCCACTCGTTCTCATC+AGG | + | chr1_1:66774634-66774653 | Msa0037660:CDS | 55.0% | |
| GTCGGATGGGATCAGTAAGG+TGG | + | chr1_1:66774772-66774791 | Msa0037660:CDS | 55.0% | |
| TGGGGCCTCATCTTCTCCAT+TGG | - | chr1_1:66775782-66775801 | None:intergenic | 55.0% | |
| GCGTGAGCTCAGTGGAACAA+TGG | + | chr1_1:66776042-66776061 | Msa0037660:CDS | 55.0% | |
| ! | GGCCGAGGTTTGATTTCTGG+TGG | - | chr1_1:66776148-66776167 | None:intergenic | 55.0% |
| ATGCGAGGAGTAATTGGCCG+AGG | - | chr1_1:66776163-66776182 | None:intergenic | 55.0% | |
| GAGACTATCTAGGCGGCGTA+CGG | + | chr1_1:66776766-66776785 | Msa0037660:CDS | 55.0% | |
| TGGAGAGGAACACACCGGTC+AGG | + | chr1_1:66774537-66774556 | Msa0037660:CDS | 60.0% | |
| ! | GAACGAGTGGCGGAAGAAGG+AGG | - | chr1_1:66774629-66774648 | None:intergenic | 60.0% |
| GCCGTCGGATGGGATCAGTA+AGG | + | chr1_1:66774769-66774788 | Msa0037660:intron | 60.0% | |
| TGGAGAAGATGAGGCCCCAG+AGG | + | chr1_1:66775783-66775802 | Msa0037660:CDS | 60.0% | |
| GAAGATGAGGCCCCAGAGGA+TGG | + | chr1_1:66775787-66775806 | Msa0037660:CDS | 60.0% | |
| GTTGGCACTGCCATCCTCTG+GGG | - | chr1_1:66775800-66775819 | None:intergenic | 60.0% | |
| GGTTGGCACTGCCATCCTCT+GGG | - | chr1_1:66775801-66775820 | None:intergenic | 60.0% | |
| GCCTGCTTCATTGCCTGAGG+TGG | + | chr1_1:66776012-66776031 | Msa0037660:CDS | 60.0% | |
| GCCACCTCAGGCAATGAAGC+AGG | - | chr1_1:66776016-66776035 | None:intergenic | 60.0% | |
| TCCACTGAGCTCACGCTGCT+TGG | - | chr1_1:66776038-66776057 | None:intergenic | 60.0% | |
| ! | GTGGCGGAAGAAGGAGGAGC+TGG | - | chr1_1:66774623-66774642 | None:intergenic | 65.0% |
| ! | GGGTTGGCACTGCCATCCTC+TGG | - | chr1_1:66775802-66775821 | None:intergenic | 65.0% |
| TCACGCTGCTTGGCCACCTC+AGG | - | chr1_1:66776028-66776047 | None:intergenic | 65.0% | |
| GCCAAGCAGCGTGAGCTCAG+TGG | + | chr1_1:66776034-66776053 | Msa0037660:CDS | 65.0% | |
| ATGCTGCTCTCGCCACCAGG+CGG | - | chr1_1:66776795-66776814 | None:intergenic | 65.0% | |
| GCAATGCTGCTCTCGCCACC+AGG | - | chr1_1:66776798-66776817 | None:intergenic | 65.0% | |
| TGGCGAGAGCAGCATTGCGC+TGG | + | chr1_1:66776800-66776819 | Msa0037660:CDS | 65.0% | |
| GGCGTACGGAAGCCGCCTGG+TGG | + | chr1_1:66776780-66776799 | Msa0037660:CDS | 75.0% | |
| ! | GGCGGCGTACGGAAGCCGCC+TGG | + | chr1_1:66776777-66776796 | Msa0037660:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 66774301 | 66777081 | 66774301 | ID=Msa0037660;Name=Msa0037660 |
| chr1_1 | mRNA | 66774301 | 66777081 | 66774301 | ID=Msa0037660-mRNA-1;Parent=Msa0037660;Name=Msa0037660-mRNA-1;_AED=0.07;_eAED=0.07;_QI=235|1|1|1|1|1|5|254|288 |
| chr1_1 | exon | 66774301 | 66774655 | 66774301 | ID=Msa0037660-mRNA-1:exon:21585;Parent=Msa0037660-mRNA-1 |
| chr1_1 | exon | 66774770 | 66774843 | 66774770 | ID=Msa0037660-mRNA-1:exon:21586;Parent=Msa0037660-mRNA-1 |
| chr1_1 | exon | 66775723 | 66775855 | 66775723 | ID=Msa0037660-mRNA-1:exon:21587;Parent=Msa0037660-mRNA-1 |
| chr1_1 | exon | 66775950 | 66776222 | 66775950 | ID=Msa0037660-mRNA-1:exon:21588;Parent=Msa0037660-mRNA-1 |
| chr1_1 | exon | 66776561 | 66777081 | 66776561 | ID=Msa0037660-mRNA-1:exon:21589;Parent=Msa0037660-mRNA-1 |
| chr1_1 | five_prime_UTR | 66774301 | 66774535 | 66774301 | ID=Msa0037660-mRNA-1:five_prime_utr;Parent=Msa0037660-mRNA-1 |
| chr1_1 | CDS | 66774536 | 66774655 | 66774536 | ID=Msa0037660-mRNA-1:cds;Parent=Msa0037660-mRNA-1 |
| chr1_1 | CDS | 66774770 | 66774843 | 66774770 | ID=Msa0037660-mRNA-1:cds;Parent=Msa0037660-mRNA-1 |
| chr1_1 | CDS | 66775723 | 66775855 | 66775723 | ID=Msa0037660-mRNA-1:cds;Parent=Msa0037660-mRNA-1 |
| chr1_1 | CDS | 66775950 | 66776222 | 66775950 | ID=Msa0037660-mRNA-1:cds;Parent=Msa0037660-mRNA-1 |
| chr1_1 | CDS | 66776561 | 66776827 | 66776561 | ID=Msa0037660-mRNA-1:cds;Parent=Msa0037660-mRNA-1 |
| chr1_1 | three_prime_UTR | 66776828 | 66777081 | 66776828 | ID=Msa0037660-mRNA-1:three_prime_utr;Parent=Msa0037660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
