AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0891700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0891700 MtrunA17_Chr6g0472571 97.335 638 15 1 1 638 1 636 0.0 1296
Msa0891700 MtrunA17_Chr1g0203741 71.569 612 156 6 24 629 19 618 0.0 921
Msa0891700 MtrunA17_Chr7g0246701 63.465 635 211 6 17 636 5 633 0.0 854
Msa0891700 MtrunA17_Chr8g0350391 62.679 627 216 5 22 636 18 638 0.0 853
Msa0891700 MtrunA17_Chr8g0388881 58.292 609 242 6 32 636 28 628 0.0 771
Msa0891700 MtrunA17_Chr4g0055031 55.974 611 254 7 27 637 17 612 0.0 737
Msa0891700 MtrunA17_Chr8g0361791 54.690 629 258 8 15 637 2 609 0.0 713
Msa0891700 MtrunA17_Chr5g0416991 55.065 612 249 8 31 637 18 608 0.0 697
Msa0891700 MtrunA17_Chr3g0092501 52.209 611 260 8 31 637 21 603 0.0 652
Msa0891700 MtrunA17_Chr7g0214551 53.571 532 236 5 87 612 26 552 0.0 608
Msa0891700 MtrunA17_Chr8g0369481 50.662 529 248 9 107 630 70 590 0.0 532
Msa0891700 MtrunA17_Chr5g0409411 45.183 602 290 11 32 628 24 590 3.40e-176 513
Msa0891700 MtrunA17_Chr8g0350351 43.962 530 268 9 110 629 91 601 3.09e-165 486
Msa0891700 MtrunA17_Chr7g0246681 44.612 529 264 9 110 628 78 587 1.50e-162 478
Msa0891700 MtrunA17_Chr1g0167381 39.232 599 315 13 31 604 14 588 9.34e-149 444
Msa0891700 MtrunA17_Chr3g0112341 42.125 527 277 11 110 625 156 665 5.32e-147 441
Msa0891700 MtrunA17_Chr5g0435751 40.832 529 269 9 106 625 124 617 7.70e-144 431
Msa0891700 MtrunA17_Chr1g0183721 40.104 576 303 12 76 633 39 590 6.03e-143 428
Msa0891700 MtrunA17_Chr1g0187601 42.259 549 283 12 107 637 91 623 7.95e-143 429
Msa0891700 MtrunA17_Chr1g0159741 39.785 558 305 13 84 627 118 658 7.97e-140 422
Msa0891700 MtrunA17_Chr3g0130381 39.905 629 311 21 44 628 171 776 1.62e-139 426
Msa0891700 MtrunA17_Chr8g0384431 42.155 529 261 19 116 624 298 801 1.05e-135 416
Msa0891700 MtrunA17_Chr3g0125511 40.445 539 276 14 111 628 228 742 4.78e-131 403
Msa0891700 MtrunA17_Chr1g0171781 37.816 632 336 16 19 629 9 604 2.83e-130 396
Msa0891700 MtrunA17_Chr5g0437501 40.296 541 267 16 112 628 97 605 8.53e-130 395
Msa0891700 MtrunA17_Chr8g0372471 40.467 514 277 12 115 615 386 883 1.91e-128 400
Msa0891700 MtrunA17_Chr3g0113981 41.551 503 255 15 115 603 174 651 5.40e-126 387
Msa0891700 MtrunA17_Chr1g0155141 37.079 534 282 17 111 628 204 699 6.34e-104 330
Msa0891700 MtrunA17_Chr3g0115931 32.014 556 325 13 110 632 157 692 9.06e-93 301
Msa0891700 MtrunA17_Chr5g0426281 32.973 555 311 17 110 632 149 674 2.97e-92 299
Msa0891700 MtrunA17_Chr5g0404771 48.347 242 100 6 116 341 329 561 1.73e-70 239
Msa0891700 MtrunA17_Chr5g0404761 36.594 276 156 7 356 619 1 269 3.15e-55 189
Msa0891700 MtrunA17_Chr4g0043121 31.646 316 198 6 110 414 89 397 4.95e-52 185
Msa0891700 MtrunA17_Chr4g0043131 44.118 136 72 3 485 617 40 174 4.19e-33 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0891700 AT2G45750.1 62.379 622 215 6 24 636 12 623 0.0 842
Msa0891700 AT4G00750.1 60.692 636 227 9 14 637 7 631 0.0 823
Msa0891700 AT1G33170.1 56.381 619 250 5 32 633 24 639 0.0 762
Msa0891700 AT4G10440.1 58.049 615 245 6 24 634 17 622 0.0 761
Msa0891700 AT1G26850.2 55.195 616 256 7 25 634 13 614 0.0 716
Msa0891700 AT1G26850.1 55.195 616 256 7 25 634 13 614 0.0 716
Msa0891700 AT4G18030.1 54.925 599 255 5 32 630 22 605 0.0 699
Msa0891700 AT2G43200.2 52.207 521 240 5 107 623 91 606 0.0 581
Msa0891700 AT2G43200.1 52.207 521 240 5 107 623 91 606 0.0 581
Msa0891700 AT1G26850.3 52.381 504 220 7 25 522 13 502 0.0 545
Msa0891700 AT1G31850.1 45.902 610 285 15 31 630 24 598 0.0 538
Msa0891700 AT1G31850.2 45.902 610 285 15 31 630 24 598 0.0 538
Msa0891700 AT1G31850.4 45.902 610 285 15 31 630 24 598 0.0 538
Msa0891700 AT1G31850.3 45.902 610 285 15 31 630 24 598 0.0 538
Msa0891700 AT4G19120.1 43.902 615 299 12 31 637 23 599 2.77e-178 519
Msa0891700 AT4G19120.2 43.902 615 299 12 31 637 23 599 2.77e-178 519
Msa0891700 AT4G00740.1 44.382 534 270 7 110 634 84 599 6.31e-165 485
Msa0891700 AT4G00740.2 44.382 534 270 7 110 634 84 599 6.31e-165 485
Msa0891700 AT2G39750.1 43.364 535 269 12 106 626 176 690 2.71e-154 461
Msa0891700 AT5G06050.1 40.106 566 309 11 77 630 119 666 1.81e-149 448
Msa0891700 AT4G19120.3 44.163 514 242 11 31 536 23 499 2.16e-147 436
Msa0891700 AT1G04430.1 38.679 636 326 15 31 633 14 618 4.51e-147 440
Msa0891700 AT1G04430.3 38.679 636 326 15 31 633 14 618 4.51e-147 440
Msa0891700 AT1G04430.2 38.679 636 326 15 31 633 14 618 4.51e-147 440
Msa0891700 AT4G14360.1 43.520 517 261 10 103 604 72 572 8.05e-144 431
Msa0891700 AT4G14360.2 43.520 517 261 10 103 604 72 572 8.05e-144 431
Msa0891700 AT1G77260.1 41.210 529 279 12 110 626 146 654 7.13e-142 428
Msa0891700 AT5G14430.1 42.831 544 276 12 108 632 81 608 1.06e-141 426
Msa0891700 AT3G23300.2 42.278 518 268 10 103 605 75 576 3.63e-140 422
Msa0891700 AT3G23300.1 42.278 518 268 10 103 605 75 576 3.63e-140 422
Msa0891700 AT5G14430.2 42.279 544 279 12 108 632 81 608 1.69e-139 420
Msa0891700 AT2G34300.2 41.220 541 270 15 116 635 250 763 6.49e-133 408
Msa0891700 AT2G34300.3 41.220 541 270 15 116 635 250 763 6.49e-133 408
Msa0891700 AT2G34300.1 41.220 541 270 15 116 635 250 763 6.49e-133 408
Msa0891700 AT3G51070.1 42.026 533 267 17 115 628 380 889 7.11e-133 412
Msa0891700 AT3G56080.1 40.152 528 268 14 116 628 114 608 1.68e-132 402
Msa0891700 AT5G04060.1 38.750 560 302 9 87 629 63 598 4.63e-132 400
Msa0891700 AT5G64030.1 41.243 531 272 15 116 628 308 816 9.54e-132 407
Msa0891700 AT3G10200.1 40.296 541 276 13 110 629 75 589 1.56e-131 399
Msa0891700 AT1G29470.1 40.301 531 281 15 116 631 250 759 1.80e-131 405
Msa0891700 AT1G29470.2 40.301 531 281 15 116 631 250 759 1.80e-131 405
Msa0891700 AT2G40280.1 40.417 527 267 17 115 628 89 581 1.65e-129 394
Msa0891700 AT3G10200.2 40.272 514 259 13 110 601 75 562 1.17e-122 376
Msa0891700 AT3G51070.2 43.656 465 228 15 115 562 380 827 9.85e-117 368
Msa0891700 AT3G56080.2 40.909 462 233 13 116 562 114 550 1.11e-116 359
Msa0891700 AT1G19430.1 37.406 532 284 16 111 628 226 722 9.54e-104 331
Msa0891700 AT1G19430.3 37.406 532 284 16 111 628 226 722 9.54e-104 331
Msa0891700 AT1G13860.4 30.051 589 340 13 61 617 44 592 1.75e-91 295
Msa0891700 AT1G13860.3 30.051 589 340 13 61 617 44 592 1.75e-91 295
Msa0891700 AT1G13860.1 30.051 589 340 13 61 617 44 592 1.75e-91 295
Msa0891700 AT1G13860.5 30.051 589 340 13 61 617 44 592 1.75e-91 295
Msa0891700 AT1G78240.1 32.613 555 312 17 110 627 149 678 4.08e-88 289
Msa0891700 AT1G78240.2 32.613 555 312 17 110 627 149 678 4.08e-88 289
Msa0891700 AT2G03480.2 30.499 541 306 11 106 617 85 584 8.67e-86 280
Msa0891700 AT2G03480.1 31.144 533 324 12 106 617 85 595 2.62e-85 279
Msa0891700 AT1G13860.2 32.898 459 252 12 188 617 5 436 1.34e-80 262
Msa0891700 AT1G19430.2 33.250 400 224 13 111 497 226 595 7.19e-57 203
Msa0891700 AT2G03480.3 32.155 283 178 3 106 379 85 362 7.25e-48 174

Find 175 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGACATGAATGCTTATT+TGG 0.073772 6_1:-67752887 Msa0891700:CDS
CACTTGTTAAATATCCTATT+TGG 0.102129 6_1:-67752849 Msa0891700:CDS
TTTAGCTACATTCTCAATTT+TGG 0.149493 6_1:+67754642 None:intergenic
TTGGAGGGTTTGAAGGGTTT+TGG 0.222257 6_1:+67759171 None:intergenic
CTTCTTTGTTGGACACTTTA+GGG 0.225235 6_1:+67753100 None:intergenic
AGAGGTGTTCCTGCAATTAT+TGG 0.248757 6_1:-67755363 Msa0891700:CDS
TGATTGGAATGTATCATAAT+TGG 0.257260 6_1:-67752762 Msa0891700:intron
TTTAAGATTTCATGTTTCTT+AGG 0.258970 6_1:+67758772 None:intergenic
ATTTCAAAGGGGACCATTAA+AGG 0.260047 6_1:-67753018 Msa0891700:CDS
TCTTCTTTGTTGGACACTTT+AGG 0.260669 6_1:+67753099 None:intergenic
TTAAATACATTGTCTATTAG+AGG 0.263740 6_1:-67751859 Msa0891700:three_prime_UTR
TATTTGCTGTGAAGAAATAT+TGG 0.264293 6_1:-67752087 Msa0891700:CDS
ATTGCAAATTCACTCAAAAT+AGG 0.265035 6_1:-67754549 Msa0891700:CDS
GACAATGTATTTAACTAATA+AGG 0.265408 6_1:+67751868 None:intergenic
AGCACATACCATGCTTTATC+AGG 0.274972 6_1:+67754502 None:intergenic
CATATTCAGGCCATGGAATA+AGG 0.284184 6_1:+67755274 None:intergenic
ACCTGAAATTTCTTCTTTGT+TGG 0.284477 6_1:+67753089 None:intergenic
TTGATGTAGTGTTGTTGTTT+TGG 0.296047 6_1:+67759061 None:intergenic
TTATTCTGCTCTTGGCAAAA+AGG 0.302945 6_1:+67754526 None:intergenic
CAATTCGCTGGAAGAAATAT+TGG 0.311579 6_1:-67754708 Msa0891700:CDS
CTCAAATGACAATACTATTT+AGG 0.311881 6_1:-67752053 Msa0891700:exon
TAGAGATGATGTTGATATAT+TGG 0.313175 6_1:-67752197 Msa0891700:CDS
CTTATTCCATGGCCTGAATA+TGG 0.319290 6_1:-67755273 Msa0891700:intron
TTGAGGTGTGACACCTTTAA+TGG 0.321435 6_1:+67753005 None:intergenic
GATAAGTACATTGATGATAT+TGG 0.332251 6_1:-67758562 Msa0891700:CDS
AATAAGCATTCATGTCTAAT+AGG 0.333573 6_1:+67752890 None:intergenic
GAGGTGTTCCTGCAATTATT+GGG 0.334013 6_1:-67755362 Msa0891700:CDS
GTTCGAACTGCTGTTGATAC+TGG 0.335844 6_1:-67758511 Msa0891700:CDS
CTAATTATTACACTTCCTTC+TGG 0.339638 6_1:+67752217 None:intergenic
TTGGTGTGACTTTCTTGATT+TGG 0.342753 6_1:+67759025 None:intergenic
TTTCAAGAGGCCCATCTTCA+TGG 0.344644 6_1:+67752122 None:intergenic
AGAAAGGTGATATTGCTATT+TGG 0.345270 6_1:-67754594 Msa0891700:CDS
TCCAACAAAGAAGAAATTTC+AGG 0.345485 6_1:-67753090 Msa0891700:CDS
CAATATTTCTTCCAGCGAAT+TGG 0.347489 6_1:+67754709 None:intergenic
ACTTGTTAAATATCCTATTT+GGG 0.348847 6_1:-67752848 Msa0891700:CDS
ATGTATACCTGTCATTATAA+AGG 0.354957 6_1:+67752595 None:intergenic
TTATTATAGATTGAGGAGTT+TGG 0.361375 6_1:+67759284 None:intergenic
AAGAAAACTATACCATATTC+AGG 0.368879 6_1:+67755261 None:intergenic
TTAGACATGAATGCTTATTT+GGG 0.377741 6_1:-67752886 Msa0891700:CDS
TTCTACGTCCTGGTGGGTAT+TGG 0.381477 6_1:-67754747 Msa0891700:CDS
ACACAGAATCAGCATGAATT+AGG 0.382074 6_1:+67752622 None:intergenic
ACCACATTCATAACCCAAAT+AGG 0.383835 6_1:+67752835 None:intergenic
GTTGTTGTGGACGTGGTTGT+TGG 0.385659 6_1:+67758910 None:intergenic
TCTCAAAAGACAATCAACTA+TGG 0.388474 6_1:-67752978 Msa0891700:CDS
ATAAGTACATTGATGATATT+GGG 0.396472 6_1:-67758561 Msa0891700:CDS
TTCGGATGTGTATGGTGATC+TGG 0.396642 6_1:-67751914 Msa0891700:three_prime_UTR
ATGTATGCAGGTTGCTAGTT+GGG 0.397277 6_1:-67755472 Msa0891700:intron
GCCATGTCAAAGGCTCTAGA+AGG 0.400141 6_1:+67755312 None:intergenic
TATCAGGATTATTCTGCTCT+TGG 0.402241 6_1:+67754518 None:intergenic
TGCAAGCAAACTTTGTTGAA+TGG 0.402919 6_1:-67751765 Msa0891700:three_prime_UTR
GGTGGGTATTGGATTCTATC+TGG 0.410013 6_1:-67754736 Msa0891700:CDS
AGAGCGCGTGTGGTCTTCAC+AGG 0.420340 6_1:+67758840 None:intergenic
GTATCAACTTTAGCTTGAAT+AGG 0.420482 6_1:+67752811 None:intergenic
TTCTTGTAACCGTTTGGTGC+TGG 0.420744 6_1:+67758739 None:intergenic
TTCGAACGACATAAGTTGTT+CGG 0.421737 6_1:-67751974 Msa0891700:three_prime_UTR
ATGTCTCTACTTGTGGGCCA+TGG 0.424197 6_1:+67758709 None:intergenic
TGAATTAGGTCATAAGTTCT+AGG 0.424421 6_1:+67752636 None:intergenic
AAAGGATTCTTGTAACCGTT+TGG 0.425376 6_1:+67758733 None:intergenic
TGTACCTTACCGTCATTTAA+CGG 0.426177 6_1:-67758671 Msa0891700:CDS
GTTCAATTTGCTCTTGAAAG+AGG 0.426870 6_1:-67755381 Msa0891700:CDS
AGACAACAATCCTTGATTCC+AGG 0.429180 6_1:-67751723 None:intergenic
TCTGCTTTGTAGATGTGAAT+TGG 0.430180 6_1:-67752275 Msa0891700:intron
GTCATAAAGCCCTGGAATCA+AGG 0.436257 6_1:+67751713 None:intergenic
AACAATCAACTTGGAAAAGC+TGG 0.441002 6_1:-67752925 Msa0891700:CDS
ATGTAGCTAAAAGCCTTTGT+TGG 0.443086 6_1:-67754630 Msa0891700:CDS
CCATGCCATGTCTCTACTTG+TGG 0.447399 6_1:+67758702 None:intergenic
TTGTTGGACACTTTAGGGAG+TGG 0.452460 6_1:+67753105 None:intergenic
ATATATGAAAGAGGGTTGAT+TGG 0.453552 6_1:-67752778 Msa0891700:CDS
GGAAGAAATATTGGAAAGGA+TGG 0.455736 6_1:-67754699 Msa0891700:CDS
GTTCTCGCTGCCTTATTCCA+TGG 0.455747 6_1:-67755284 Msa0891700:CDS
AGTGTATTTGGAGGGTTTGA+AGG 0.458351 6_1:+67759164 None:intergenic
TGTTTAGCCTTTATAATGAC+AGG 0.459506 6_1:-67752602 Msa0891700:intron
CAGGTGGGGAATTAAACAAT+TGG 0.462584 6_1:-67753071 Msa0891700:CDS
GCAAAGACCCCAATAATTGC+AGG 0.463464 6_1:+67755354 None:intergenic
GTGGTGATTATTTGTGTTTG+AGG 0.464317 6_1:+67759309 None:intergenic
ATGTACTTATCAGCACCATT+AGG 0.469341 6_1:+67758574 None:intergenic
ATGGTCCCCTTTGAAATCCT+AGG 0.473543 6_1:+67753024 None:intergenic
GGTGGTACTATGTTTCCTAA+TGG 0.474022 6_1:-67758589 Msa0891700:CDS
GGAACTTATCACCGTCAAAA+CGG 0.476216 6_1:+67758623 None:intergenic
CAAATTGTGGACCATGAAGA+TGG 0.476768 6_1:-67752133 Msa0891700:CDS
TTGGAAAAGCTGGTAGATAC+AGG 0.480976 6_1:-67752915 Msa0891700:CDS
AAAGAGCATAATCAATGGCT+TGG 0.481691 6_1:-67752167 Msa0891700:CDS
AATACAAAAGTGAGGAAGGA+AGG 0.482029 6_1:+67751811 None:intergenic
CATAATCAATGGCTTGGAAT+GGG 0.484368 6_1:-67752161 Msa0891700:CDS
TTGAGTTGAGTGATGAAGAT+GGG 0.484456 6_1:+67759248 None:intergenic
CCTTTGTTGGAATAAAATAG+TGG 0.487141 6_1:-67754617 Msa0891700:CDS
TATTTCTTCCAGCGAATTGG+TGG 0.489851 6_1:+67754712 None:intergenic
CTACTTGTGGGCCATGGGAA+AGG 0.490397 6_1:+67758715 None:intergenic
CAAGCTAAAGTTGATACACT+TGG 0.491094 6_1:-67752805 Msa0891700:CDS
TCAATCATCAACATGGCAAA+TGG 0.492051 6_1:-67759207 Msa0891700:exon
TAGTACCACCACCAGGAAAA+CGG 0.493127 6_1:+67758602 None:intergenic
TTTGCTTGCACTATCCCAAA+AGG 0.493533 6_1:+67751778 None:intergenic
AAGTTGATTAATCTTGAAGA+TGG 0.495272 6_1:-67758538 Msa0891700:CDS
TATCTGGTCCACCAATTCGC+TGG 0.497419 6_1:-67754720 Msa0891700:CDS
TTATAGATTGAGGAGTTTGG+TGG 0.500799 6_1:+67759287 None:intergenic
GAGTGAGTTATTATAGATTG+AGG 0.504255 6_1:+67759277 None:intergenic
AGAGGATGTTGTTGTGGACG+TGG 0.504783 6_1:+67758903 None:intergenic
TCCTATTTGGGTTATGAATG+TGG 0.505514 6_1:-67752836 Msa0891700:CDS
AAAAGTTTCTCTCTTTCAAG+AGG 0.510531 6_1:+67752109 None:intergenic
ACCCCACCTAGGATTTCAAA+GGG 0.515316 6_1:-67753030 Msa0891700:CDS
AACAGTGTCAATTGCACCAA+GGG 0.515618 6_1:-67755421 Msa0891700:CDS
CTAAATAGTATTGTCATTTG+AGG 0.516055 6_1:+67752054 None:intergenic
CCCCTTTGAAATCCTAGGTG+GGG 0.516176 6_1:+67753029 None:intergenic
TGTCTCTACTTGTGGGCCAT+GGG 0.516352 6_1:+67758710 None:intergenic
TGGAATAAAATAGTGGAGAA+AGG 0.516837 6_1:-67754610 Msa0891700:CDS
GCATAATCAATGGCTTGGAA+TGG 0.517234 6_1:-67752162 Msa0891700:CDS
TAGATTGAGGAGTTTGGTGG+TGG 0.518796 6_1:+67759290 None:intergenic
ACTGCTGTTGATACTGGCTG+TGG 0.520180 6_1:-67758505 Msa0891700:CDS
GTGTATTTGGAGGGTTTGAA+GGG 0.520547 6_1:+67759165 None:intergenic
ACATATTGCTAGAGATGGAT+AGG 0.520899 6_1:-67752249 Msa0891700:CDS
CATGCCATGTCTCTACTTGT+GGG 0.521512 6_1:+67758703 None:intergenic
GATGTATGCAGGTTGCTAGT+TGG 0.525030 6_1:-67755473 Msa0891700:intron
CCCTTCTAGAGCCTTTGACA+TGG 0.525416 6_1:-67755313 Msa0891700:CDS
TCTTAGGACAGTGTCGTTCG+CGG 0.526064 6_1:+67758788 None:intergenic
GACATGAATGCTTATTTGGG+TGG 0.530858 6_1:-67752883 Msa0891700:CDS
GGAAGACATATTGCTAGAGA+TGG 0.531377 6_1:-67752254 Msa0891700:CDS
ATAGTATTGTCATTTGAGGC+AGG 0.531671 6_1:+67752058 None:intergenic
TCCCCTTTGAAATCCTAGGT+GGG 0.532337 6_1:+67753028 None:intergenic
TTGAGTGATGAAGATGGGTT+TGG 0.532812 6_1:+67759253 None:intergenic
TCCACCGTTAAATGACGGTA+AGG 0.535817 6_1:+67758667 None:intergenic
TATGTCACGTGATAGTAGAT+AGG 0.536542 6_1:+67755446 None:intergenic
TTAAAATACAAAAGTGAGGA+AGG 0.541004 6_1:+67751807 None:intergenic
ACTATACCATATTCAGGCCA+TGG 0.542687 6_1:+67755267 None:intergenic
GTTGATAGAATTCTACGTCC+TGG 0.555005 6_1:-67754757 Msa0891700:CDS
TGTGCTTCATGAGTATCCCT+TGG 0.555852 6_1:+67755405 None:intergenic
TGTGTATGGTGATCTGGTGT+TGG 0.556268 6_1:-67751908 Msa0891700:three_prime_UTR
AAAGTAAAGAGCATAATCAA+TGG 0.558091 6_1:-67752172 Msa0891700:CDS
CTTGGAGCAATATATGAAAG+AGG 0.559920 6_1:-67752787 Msa0891700:CDS
TTTGAGTTGAGTGATGAAGA+TGG 0.565727 6_1:+67759247 None:intergenic
CTGCTGTTGATACTGGCTGT+GGG 0.566827 6_1:-67758504 Msa0891700:CDS
CGCTGGAAGAAATATTGGAA+AGG 0.570543 6_1:-67754703 Msa0891700:CDS
GAGCGCGTGTGGTCTTCACA+GGG 0.573413 6_1:+67758841 None:intergenic
CAAAGAAGAAATTTCAGGTG+GGG 0.578360 6_1:-67753085 Msa0891700:CDS
AGAACAATGTGCCATGTCAA+AGG 0.578937 6_1:+67755302 None:intergenic
AACCCCACCTAGGATTTCAA+AGG 0.579195 6_1:-67753031 Msa0891700:CDS
ATGTGAGAAGAAATCTAAGT+TGG 0.585176 6_1:+67758948 None:intergenic
GAAGAAATATTGGAAAGGAT+GGG 0.586262 6_1:-67754698 Msa0891700:CDS
AAAAGTATGAAATGATGCAA+AGG 0.586323 6_1:+67759094 None:intergenic
AACAAAGAAGAAATTTCAGG+TGG 0.587726 6_1:-67753087 Msa0891700:CDS
GGGGTGTAGTCAGTTAAAGA+GGG 0.591990 6_1:+67758862 None:intergenic
GCGCGTGTGGTCTTCACAGG+GGG 0.592206 6_1:+67758843 None:intergenic
AGAATAATCCTGATAAAGCA+TGG 0.595250 6_1:-67754510 Msa0891700:intron
TGTCGTGTTCCAGCACCAAA+CGG 0.596625 6_1:-67758748 Msa0891700:CDS
GGAATGGGAGAGTCAAATTG+TGG 0.598742 6_1:-67752146 Msa0891700:CDS
ATTGTCATTTGAGGCAGGAG+AGG 0.601191 6_1:+67752063 None:intergenic
AAATTGTGGACCATGAAGAT+GGG 0.601433 6_1:-67752132 Msa0891700:CDS
GATAGGATTCTTAGACCAGA+AGG 0.608500 6_1:-67752232 Msa0891700:CDS
TCAAAGGCTCTAGAAGGGAA+AGG 0.608892 6_1:+67755318 None:intergenic
GTTACAAGAATCCTTTCCCA+TGG 0.609267 6_1:-67758726 Msa0891700:CDS
GATAGAATTCTACGTCCTGG+TGG 0.611198 6_1:-67754754 Msa0891700:CDS
CCATGTCAAAGGCTCTAGAA+GGG 0.611499 6_1:+67755313 None:intergenic
AGGTGTTCCTGCAATTATTG+GGG 0.614069 6_1:-67755361 Msa0891700:CDS
CACACTCTCAATCATCAACA+TGG 0.615469 6_1:-67759214 Msa0891700:exon
GTATTGAGAGGATGTTGTTG+TGG 0.626968 6_1:+67758897 None:intergenic
GTCCCCTTTGAAATCCTAGG+TGG 0.627138 6_1:+67753027 None:intergenic
ACAAAGAAGAAATTTCAGGT+GGG 0.634673 6_1:-67753086 Msa0891700:CDS
TGTATGCAGGTTGCTAGTTG+GGG 0.635603 6_1:-67755471 Msa0891700:intron
TTGGAGCAATATATGAAAGA+GGG 0.636053 6_1:-67752786 Msa0891700:CDS
ATAGAATTCTACGTCCTGGT+GGG 0.639209 6_1:-67754753 Msa0891700:CDS
ACAATTAAAATACAAAAGTG+AGG 0.641655 6_1:+67751803 None:intergenic
GTATGGTGATCTGGTGTTGG+AGG 0.645732 6_1:-67751905 Msa0891700:three_prime_UTR
TGCTGTTGATACTGGCTGTG+GGG 0.658528 6_1:-67758503 Msa0891700:intron
CCACAAGTAGAGACATGGCA+TGG 0.660470 6_1:-67758702 Msa0891700:CDS
AGCGCGTGTGGTCTTCACAG+GGG 0.661355 6_1:+67758842 None:intergenic
GACTAAAATCAACCCCACCT+AGG 0.665392 6_1:-67753041 Msa0891700:CDS
ACCTTACCGTCATTTAACGG+TGG 0.667967 6_1:-67758668 Msa0891700:CDS
GGTGCATGGTGGGTATTGAG+AGG 0.671405 6_1:+67758885 None:intergenic
GGAAACATAGTACCACCACC+AGG 0.673211 6_1:+67758595 None:intergenic
ATGGCCCACAAGTAGAGACA+TGG 0.675055 6_1:-67758707 Msa0891700:CDS
TGTGTTTGAGAGAGCGCGTG+TGG 0.682004 6_1:+67758830 None:intergenic
GATAGAATCCAATACCCACC+AGG 0.684534 6_1:+67754739 None:intergenic
TAACAGTGTCAATTGCACCA+AGG 0.686736 6_1:-67755422 Msa0891700:CDS
GGGTGTAGTCAGTTAAAGAG+GGG 0.699749 6_1:+67758863 None:intergenic
GGTGTAGTCAGTTAAAGAGG+GGG 0.715881 6_1:+67758864 None:intergenic
CCCCACCTAGGATTTCAAAG+GGG 0.775769 6_1:-67753029 Msa0891700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTCTTTTTTTTTTTTTT+TGG + chr6_1:67754561-67754580 None:intergenic 10.0%
!! AGAAAAAAATATAAAGAAAA+AGG + chr6_1:67754667-67754686 None:intergenic 10.0%
!!! TTAATGTTATTTTTTTAATG+GGG + chr6_1:67755287-67755306 None:intergenic 10.0%
!!! CTTTAATGTTATTTTTTTAA+TGG + chr6_1:67755289-67755308 None:intergenic 10.0%
!! AATATAAAAATTAACTATCA+CGG - chr6_1:67755436-67755455 Msa0891700:CDS 10.0%
!!! TTATATCCTTTAAAAATTAT+CGG + chr6_1:67757029-67757048 None:intergenic 10.0%
!! ACATAAGAATAAAAAATAAT+TGG + chr6_1:67757534-67757553 None:intergenic 10.0%
!! AATGAATTATATATATTGTT+TGG + chr6_1:67757705-67757724 None:intergenic 10.0%
!!! TTGATGATTTTTTTTTTTAA+AGG - chr6_1:67758330-67758349 Msa0891700:intron 10.0%
!!! TGATGATTTTTTTTTTTAAA+GGG - chr6_1:67758331-67758350 Msa0891700:intron 10.0%
!!! ATAATAAAAATTGTGTTTTT+CGG - chr6_1:67759103-67759122 Msa0891700:CDS 10.0%
!!! TTTTTGGATTTTGATTTTTT+TGG + chr6_1:67752043-67752062 None:intergenic 15.0%
!! TTTCATTCATCAAATAATTA+CGG - chr6_1:67753061-67753080 Msa0891700:CDS 15.0%
!!! TTTCTAGATTTTTTTATAAG+AGG - chr6_1:67753380-67753399 Msa0891700:intron 15.0%
!! ATTTCAAATTATTGAACTTT+AGG + chr6_1:67753510-67753529 None:intergenic 15.0%
!!! ATTTTGGGATATTATTATAA+TGG - chr6_1:67753561-67753580 Msa0891700:intron 15.0%
!!! TTTTGGGATATTATTATAAT+GGG - chr6_1:67753562-67753581 Msa0891700:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr6_1:67753859-67753878 Msa0891700:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr6_1:67753860-67753879 Msa0891700:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr6_1:67753924-67753943 Msa0891700:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr6_1:67753925-67753944 Msa0891700:intron 15.0%
!!! TTTAGCTATTAGTAATTTTT+AGG + chr6_1:67754254-67754273 None:intergenic 15.0%
!! TAAATGACTAGATTAATTAA+TGG - chr6_1:67754270-67754289 Msa0891700:intron 15.0%
!! TTTATATAATCCATATTTCA+AGG + chr6_1:67755921-67755940 None:intergenic 15.0%
!! TACAAAAAAATGCAATAATT+TGG + chr6_1:67756674-67756693 None:intergenic 15.0%
!! TTTCAAAATAATTTAGTACA+GGG + chr6_1:67757149-67757168 None:intergenic 15.0%
!!! TTTTCAAAATAATTTAGTAC+AGG + chr6_1:67757150-67757169 None:intergenic 15.0%
!! TGACAATATAAACATAAATT+TGG - chr6_1:67757433-67757452 Msa0891700:intron 15.0%
!!! ATAAATTTGGTTTACATTTT+TGG - chr6_1:67757446-67757465 Msa0891700:intron 15.0%
!!! TAAATTTGGTTTACATTTTT+GGG - chr6_1:67757447-67757466 Msa0891700:intron 15.0%
!!! CATGTTAGTAATTATTATTT+TGG - chr6_1:67757869-67757888 Msa0891700:intron 15.0%
!!! ATTTTTTTTTTTAAAGGGTT+TGG - chr6_1:67758336-67758355 Msa0891700:intron 15.0%
!! ATAATTCTTATATTGTGATT+TGG + chr6_1:67758704-67758723 None:intergenic 15.0%
!!! TATTTTAATTGTTACCTTTT+GGG - chr6_1:67759243-67759262 Msa0891700:five_prime_UTR 15.0%
!!! TTTAAGATTTCATGTTTCTT+AGG + chr6_1:67752266-67752285 None:intergenic 20.0%
!!! ATAAGTACATTGATGATATT+GGG - chr6_1:67752474-67752493 Msa0891700:intron 20.0%
!!! ATTTTGTTTCCTAAAAAAAC+TGG + chr6_1:67752623-67752642 None:intergenic 20.0%
!!! TTTTTTAGGAAACAAAATTG+AGG - chr6_1:67752625-67752644 Msa0891700:CDS 20.0%
!!! TTTTTAGGAAACAAAATTGA+GGG - chr6_1:67752626-67752645 Msa0891700:CDS 20.0%
!!! CACTTATATTGCTTTTATTA+AGG + chr6_1:67753182-67753201 None:intergenic 20.0%
!!! ATGTTTTTTCTTTCTTGAAA+GGG - chr6_1:67753246-67753265 Msa0891700:intron 20.0%
!!! ACAAAATTTTTATGAACCTA+AGG - chr6_1:67753351-67753370 Msa0891700:intron 20.0%
!!! TAGATTTTTTTATAAGAGGA+TGG - chr6_1:67753384-67753403 Msa0891700:intron 20.0%
!! TATCACTTTCTCTATAAAAT+AGG - chr6_1:67753467-67753486 Msa0891700:intron 20.0%
!!! TTCAATAATTTGAAATTGTG+AGG - chr6_1:67753514-67753533 Msa0891700:intron 20.0%
!!! TTTGGGATATTATTATAATG+GGG - chr6_1:67753563-67753582 Msa0891700:intron 20.0%
!! CTAGTCAATTTATGTTATTA+AGG - chr6_1:67753620-67753639 Msa0891700:intron 20.0%
!! CAATTTATGTTATTAAGGAA+TGG - chr6_1:67753625-67753644 Msa0891700:intron 20.0%
!! GTAAAGAATCTTTATGAAAA+AGG + chr6_1:67753747-67753766 None:intergenic 20.0%
!! TCTTTACGTTAATTAATTCT+TGG - chr6_1:67753760-67753779 Msa0891700:intron 20.0%
!! CTTTACGTTAATTAATTCTT+GGG - chr6_1:67753761-67753780 Msa0891700:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr6_1:67753861-67753880 Msa0891700:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr6_1:67753994-67754013 Msa0891700:intron 20.0%
!! ATAGCATACTAGTAAAAATT+AGG - chr6_1:67754059-67754078 Msa0891700:intron 20.0%
!! TAGCATACTAGTAAAAATTA+GGG - chr6_1:67754060-67754079 Msa0891700:intron 20.0%
!! AATTCTATACTATGGTATTA+TGG + chr6_1:67754523-67754542 None:intergenic 20.0%
!!! TTTTATGGAATTCTATACTA+TGG + chr6_1:67754531-67754550 None:intergenic 20.0%
!!! TTTTTTGGTCAAGTATTTTA+TGG + chr6_1:67754546-67754565 None:intergenic 20.0%
!! ATTCCTTCATAAAAAGAAAA+AGG - chr6_1:67754615-67754634 Msa0891700:CDS 20.0%
!!! TTTCCTTTTTCTTTTTATGA+AGG + chr6_1:67754621-67754640 None:intergenic 20.0%
!! AAATTTCAAAAGATCTGATT+TGG - chr6_1:67754711-67754730 Msa0891700:CDS 20.0%
!!! ATATATACATTGACTATATC+TGG - chr6_1:67754798-67754817 Msa0891700:intron 20.0%
!!! TATATACATTGACTATATCT+GGG - chr6_1:67754799-67754818 Msa0891700:intron 20.0%
!! GTACAATAATAAACTAAGTT+GGG + chr6_1:67755116-67755135 None:intergenic 20.0%
!! TGTACAATAATAAACTAAGT+TGG + chr6_1:67755117-67755136 None:intergenic 20.0%
!!! TTTTCTTTTGATGAGTTTTT+TGG + chr6_1:67755805-67755824 None:intergenic 20.0%
!! ATGTATATAATAGACAACAA+AGG + chr6_1:67755858-67755877 None:intergenic 20.0%
!! AATGTTACACATATTCTTAA+AGG + chr6_1:67755890-67755909 None:intergenic 20.0%
!!! GAATATGTGTAACATTATTT+TGG - chr6_1:67755894-67755913 Msa0891700:intron 20.0%
!! AGCATAATTCATACTTTAAA+AGG - chr6_1:67756110-67756129 Msa0891700:intron 20.0%
!!! TTTTACTTTGTTGAATTAGA+TGG - chr6_1:67756239-67756258 Msa0891700:intron 20.0%
!!! TTGCAATCTAAATGATTTTT+TGG + chr6_1:67756473-67756492 None:intergenic 20.0%
!! ATAAAAAATTCAAACACAAG+AGG + chr6_1:67756571-67756590 None:intergenic 20.0%
!! AAAAATGCAATAATTTGGAA+GGG + chr6_1:67756669-67756688 None:intergenic 20.0%
!! AAAAAATGCAATAATTTGGA+AGG + chr6_1:67756670-67756689 None:intergenic 20.0%
!! ACTACAAATTATGATTTGAT+TGG + chr6_1:67756790-67756809 None:intergenic 20.0%
!!! CATAATTTGTAGTATTAAAG+TGG - chr6_1:67756797-67756816 Msa0891700:intron 20.0%
!! TTATCAAGTTATATCTTAAG+AGG + chr6_1:67756894-67756913 None:intergenic 20.0%
!! TCTTATATATAGAGATTAGT+GGG + chr6_1:67757256-67757275 None:intergenic 20.0%
!! TTCTTATATATAGAGATTAG+TGG + chr6_1:67757257-67757276 None:intergenic 20.0%
!! TTATAAATCATGGAATCATA+GGG + chr6_1:67757382-67757401 None:intergenic 20.0%
!! ATCCAATAAATACAACTATT+TGG + chr6_1:67757414-67757433 None:intergenic 20.0%
!!! TATGTTTTTCATTTAGTGTA+AGG - chr6_1:67757549-67757568 Msa0891700:intron 20.0%
!! TATATATATTGTTTGGATAG+AGG + chr6_1:67757698-67757717 None:intergenic 20.0%
!!! TTATTATTTTGGTCACTTTT+AGG - chr6_1:67757880-67757899 Msa0891700:intron 20.0%
!! AAAAAAGTTAACAATCAACT+TGG - chr6_1:67758101-67758120 Msa0891700:intron 20.0%
!!! ACTTGTTAAATATCCTATTT+GGG - chr6_1:67758187-67758206 Msa0891700:intron 20.0%
!!! ATTTGACTTTATAATCTGAA+GGG + chr6_1:67758561-67758580 None:intergenic 20.0%
!!! AATTTGACTTTATAATCTGA+AGG + chr6_1:67758562-67758581 None:intergenic 20.0%
!! GACAATGTATTTAACTAATA+AGG + chr6_1:67759170-67759189 None:intergenic 20.0%
!! TTAAATACATTGTCTATTAG+AGG - chr6_1:67759176-67759195 Msa0891700:CDS 20.0%
!! ACAATTAAAATACAAAAGTG+AGG + chr6_1:67759235-67759254 None:intergenic 20.0%
!!! GTATTTTAATTGTTACCTTT+TGG - chr6_1:67759242-67759261 Msa0891700:five_prime_UTR 20.0%
! TTATTATAGATTGAGGAGTT+TGG + chr6_1:67751754-67751773 None:intergenic 25.0%
!!! TGTTTTTTTGCAGTTGAAAA+AGG + chr6_1:67751898-67751917 None:intergenic 25.0%
!! AAAAGTATGAAATGATGCAA+AGG + chr6_1:67751944-67751963 None:intergenic 25.0%
!!! TGCATCATTTCATACTTTTT+AGG - chr6_1:67751945-67751964 Msa0891700:three_prime_UTR 25.0%
!!! TGATTTTTTTGGAGACATTT+TGG + chr6_1:67752032-67752051 None:intergenic 25.0%
!!! GTTTTTGTGTTTGTTGTTTT+TGG + chr6_1:67752059-67752078 None:intergenic 25.0%
!! GATAAGTACATTGATGATAT+TGG - chr6_1:67752473-67752492 Msa0891700:intron 25.0%
!! AAGTTGATTAATCTTGAAGA+TGG - chr6_1:67752497-67752516 Msa0891700:intron 25.0%
!!! ATATTGCTACCAGTTTTTTT+AGG - chr6_1:67752611-67752630 Msa0891700:CDS 25.0%
!!! GTGACACATTTTACTTTTTT+AGG - chr6_1:67752744-67752763 Msa0891700:intron 25.0%
!!! ATGCTGTTTTTTATCGTTTT+GGG - chr6_1:67752776-67752795 Msa0891700:CDS 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr6_1:67752862-67752881 Msa0891700:CDS 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr6_1:67752875-67752894 Msa0891700:CDS 25.0%
! AAAAAGATATATGTTGTCCT+TGG + chr6_1:67753028-67753047 None:intergenic 25.0%
!!! GATGTTTTTTCTTTCTTGAA+AGG - chr6_1:67753245-67753264 Msa0891700:intron 25.0%
! ACTTTCTTGTAAACTAACTA+AGG - chr6_1:67753300-67753319 Msa0891700:intron 25.0%
! AATCTAGAAAAACTTTCCTT+AGG + chr6_1:67753370-67753389 None:intergenic 25.0%
! TATGAAAAAGGAATCATTAC+TGG + chr6_1:67753735-67753754 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr6_1:67753883-67753902 Msa0891700:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - chr6_1:67753971-67753990 Msa0891700:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr6_1:67753972-67753991 Msa0891700:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr6_1:67753993-67754012 Msa0891700:intron 25.0%
!!! GTATTTATTTTGCGTTTTAG+TGG - chr6_1:67754476-67754495 Msa0891700:intron 25.0%
! CCATTTATAGGCAATTAATT+CGG + chr6_1:67755089-67755108 None:intergenic 25.0%
!!! ACGGATTTGATTTTAATAGA+AGG - chr6_1:67755455-67755474 Msa0891700:CDS 25.0%
!!! CGGATTTGATTTTAATAGAA+GGG - chr6_1:67755456-67755475 Msa0891700:CDS 25.0%
!!! GGATTTGATTTTAATAGAAG+GGG - chr6_1:67755457-67755476 Msa0891700:CDS 25.0%
! AAGAAAACTATACCATATTC+AGG + chr6_1:67755777-67755796 None:intergenic 25.0%
!!! TTATTTTGGTCCTTGAAATA+TGG - chr6_1:67755908-67755927 Msa0891700:intron 25.0%
!! TTTAGCTACATTCTCAATTT+TGG + chr6_1:67756396-67756415 None:intergenic 25.0%
! ATTGCAAATTCACTCAAAAT+AGG - chr6_1:67756486-67756505 Msa0891700:intron 25.0%
!! GCTTACATTTTATTGAAGTT+TGG - chr6_1:67756601-67756620 Msa0891700:intron 25.0%
! AAGTTTGGTTAAAAGATGTT+AGG - chr6_1:67756616-67756635 Msa0891700:intron 25.0%
!! AGGTAACCGATAATTTTTAA+AGG - chr6_1:67757020-67757039 Msa0891700:intron 25.0%
! ATCAACTATAGTTAGTTGAT+AGG - chr6_1:67757201-67757220 Msa0891700:intron 25.0%
! GTTATAAATCATGGAATCAT+AGG + chr6_1:67757383-67757402 None:intergenic 25.0%
!! GAATTTTCTCCAAACTTTAA+TGG + chr6_1:67757480-67757499 None:intergenic 25.0%
! ATGTAATGTCTTTATCACTA+CGG + chr6_1:67757599-67757618 None:intergenic 25.0%
! TGAAAATTGCATAAAACAGA+TGG + chr6_1:67757744-67757763 None:intergenic 25.0%
! AATAAGCATTCATGTCTAAT+AGG + chr6_1:67758148-67758167 None:intergenic 25.0%
! ATTAGACATGAATGCTTATT+TGG - chr6_1:67758148-67758167 Msa0891700:intron 25.0%
! TTAGACATGAATGCTTATTT+GGG - chr6_1:67758149-67758168 Msa0891700:intron 25.0%
!! CACTTGTTAAATATCCTATT+TGG - chr6_1:67758186-67758205 Msa0891700:intron 25.0%
! TGATTGGAATGTATCATAAT+TGG - chr6_1:67758273-67758292 Msa0891700:intron 25.0%
!!! TTGGATTTTAATTGTTTTGC+AGG - chr6_1:67758355-67758374 Msa0891700:intron 25.0%
! ATGTATACCTGTCATTATAA+AGG + chr6_1:67758443-67758462 None:intergenic 25.0%
!!! TATATTGTGATTTGGTTGAA+TGG + chr6_1:67758696-67758715 None:intergenic 25.0%
! TAGAGATGATGTTGATATAT+TGG - chr6_1:67758838-67758857 Msa0891700:CDS 25.0%
!! AAAGTAAAGAGCATAATCAA+TGG - chr6_1:67758863-67758882 Msa0891700:CDS 25.0%
!!! TATTTGCTGTGAAGAAATAT+TGG - chr6_1:67758948-67758967 Msa0891700:CDS 25.0%
!! CTAAATAGTATTGTCATTTG+AGG + chr6_1:67758984-67759003 None:intergenic 25.0%
! CTCAAATGACAATACTATTT+AGG - chr6_1:67758982-67759001 Msa0891700:CDS 25.0%
!!! TAAGACTTTTTAGAAGCAAA+TGG + chr6_1:67759023-67759042 None:intergenic 25.0%
! TTAAAATACAAAAGTGAGGA+AGG + chr6_1:67759231-67759250 None:intergenic 25.0%
GAGTGAGTTATTATAGATTG+AGG + chr6_1:67751761-67751780 None:intergenic 30.0%
! AAAAAGGAAGTGTATTTGGA+GGG + chr6_1:67751882-67751901 None:intergenic 30.0%
! GTTGAAAAAGGAAGTGTATT+TGG + chr6_1:67751886-67751905 None:intergenic 30.0%
!!! TTGATGTAGTGTTGTTGTTT+TGG + chr6_1:67751977-67751996 None:intergenic 30.0%
ATGTGAGAAGAAATCTAAGT+TGG + chr6_1:67752090-67752109 None:intergenic 30.0%
TTTCTATCTCTTTCTCTGTT+TGG - chr6_1:67752568-67752587 Msa0891700:intron 30.0%
TTCTATCTCTTTCTCTGTTT+GGG - chr6_1:67752569-67752588 Msa0891700:intron 30.0%
!!! GATGCTGTTTTTTATCGTTT+TGG - chr6_1:67752775-67752794 Msa0891700:CDS 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr6_1:67752888-67752907 Msa0891700:CDS 30.0%
! AACCACTTCTTGACAATTTT+TGG + chr6_1:67752960-67752979 None:intergenic 30.0%
TGTGAAAGCAAGTAATTGAA+AGG + chr6_1:67753000-67753019 None:intergenic 30.0%
ATATGATAGAAACCTTCCTT+AGG + chr6_1:67753426-67753445 None:intergenic 30.0%
TCATATGAACCTAACTAACA+AGG - chr6_1:67753440-67753459 Msa0891700:intron 30.0%
TGATAAAGACCTTGTTAGTT+AGG + chr6_1:67753452-67753471 None:intergenic 30.0%
CAACGATTTACATTTGTCAT+GGG + chr6_1:67753652-67753671 None:intergenic 30.0%
ACAACGATTTACATTTGTCA+TGG + chr6_1:67753653-67753672 None:intergenic 30.0%
CTATTATGTAAGACAATGAC+AGG + chr6_1:67753698-67753717 None:intergenic 30.0%
CTGTCATTGTCTTACATAAT+AGG - chr6_1:67753696-67753715 Msa0891700:intron 30.0%
TAATTCTTGGGTACTTTAAG+TGG - chr6_1:67753773-67753792 Msa0891700:intron 30.0%
AATTCTTGGGTACTTTAAGT+GGG - chr6_1:67753774-67753793 Msa0891700:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr6_1:67753868-67753887 Msa0891700:intron 30.0%
! TCTATACGTTACTTTGTTCA+TGG + chr6_1:67754391-67754410 None:intergenic 30.0%
CAAAGTAACGTATAGAAAGA+AGG - chr6_1:67754395-67754414 Msa0891700:intron 30.0%
ATATATATGTCCACATTACC+CGG + chr6_1:67754784-67754803 None:intergenic 30.0%
!!! CACTGTGTTACTGTTTTTTA+AGG + chr6_1:67754885-67754904 None:intergenic 30.0%
GAATTAATTGAGTAGCACTT+TGG - chr6_1:67754937-67754956 Msa0891700:intron 30.0%
! ATACTTCCATGACATAGTTT+TGG + chr6_1:67755063-67755082 None:intergenic 30.0%
CCGAATTAATTGCCTATAAA+TGG - chr6_1:67755086-67755105 Msa0891700:intron 30.0%
GCTATCAAGAAAATTAGTTG+TGG + chr6_1:67755193-67755212 None:intergenic 30.0%
ATAACATTAAAGTCATGTGC+TGG - chr6_1:67755297-67755316 Msa0891700:CDS 30.0%
!! AAAACATTGATGATGTATGC+AGG - chr6_1:67755551-67755570 Msa0891700:intron 30.0%
TAATTCTAACCTATGAAGCA+TGG - chr6_1:67755944-67755963 Msa0891700:intron 30.0%
GAAGAAATATTGGAAAGGAT+GGG - chr6_1:67756337-67756356 Msa0891700:intron 30.0%
! CCACTATTTTATTCCAACAA+AGG + chr6_1:67756421-67756440 None:intergenic 30.0%
CCTTTGTTGGAATAAAATAG+TGG - chr6_1:67756418-67756437 Msa0891700:intron 30.0%
! TGGAATAAAATAGTGGAGAA+AGG - chr6_1:67756425-67756444 Msa0891700:intron 30.0%
! AGAAAGGTGATATTGCTATT+TGG - chr6_1:67756441-67756460 Msa0891700:intron 30.0%
AGAATAATCCTGATAAAGCA+TGG - chr6_1:67756525-67756544 Msa0891700:intron 30.0%
TAGACTCATTAGAAAATGAG+TGG + chr6_1:67756838-67756857 None:intergenic 30.0%
TTGACAATTTACTCTTCACT+TGG + chr6_1:67756988-67757007 None:intergenic 30.0%
ATTGTCAACCAAATGATTCT+AGG - chr6_1:67757000-67757019 Msa0891700:intron 30.0%
TACTCACTACTATAAATGTG+TGG - chr6_1:67757107-67757126 Msa0891700:intron 30.0%
TCCATGATTTATAACAGATG+TGG - chr6_1:67757388-67757407 Msa0891700:intron 30.0%
GGCCAAATAGTTGTATTTAT+TGG - chr6_1:67757409-67757428 Msa0891700:intron 30.0%
!! TTGGTTAGTTGGTTTGAAAT+TGG + chr6_1:67757769-67757788 None:intergenic 30.0%
!! GTTTGTTATACTTGGTTAGT+TGG + chr6_1:67757780-67757799 None:intergenic 30.0%
! CCAACATTTGTTAGTTGAAA+GGG + chr6_1:67757809-67757828 None:intergenic 30.0%
! ACCAACATTTGTTAGTTGAA+AGG + chr6_1:67757810-67757829 None:intergenic 30.0%
TCCAACAAAGAAGAAATTTC+AGG - chr6_1:67757945-67757964 Msa0891700:intron 30.0%
ACCTGAAATTTCTTCTTTGT+TGG + chr6_1:67757949-67757968 None:intergenic 30.0%
AACAAAGAAGAAATTTCAGG+TGG - chr6_1:67757948-67757967 Msa0891700:intron 30.0%
! ACAAAGAAGAAATTTCAGGT+GGG - chr6_1:67757949-67757968 Msa0891700:intron 30.0%
!! TTGTCTTTTGAGAATGTTTG+AGG + chr6_1:67758050-67758069 None:intergenic 30.0%
TCTCAAAAGACAATCAACTA+TGG - chr6_1:67758057-67758076 Msa0891700:intron 30.0%
!! GTATCAACTTTAGCTTGAAT+AGG + chr6_1:67758227-67758246 None:intergenic 30.0%
TTGGAGCAATATATGAAAGA+GGG - chr6_1:67758249-67758268 Msa0891700:intron 30.0%
! ATATATGAAAGAGGGTTGAT+TGG - chr6_1:67758257-67758276 Msa0891700:intron 30.0%
TGAATTAGGTCATAAGTTCT+AGG + chr6_1:67758402-67758421 None:intergenic 30.0%
! TGTTTAGCCTTTATAATGAC+AGG - chr6_1:67758433-67758452 Msa0891700:intron 30.0%
TTGTTTATTTGTGAGTTCAG+TGG + chr6_1:67758589-67758608 None:intergenic 30.0%
CTAATTATTACACTTCCTTC+TGG + chr6_1:67758821-67758840 None:intergenic 30.0%
AAAAGTTTCTCTCTTTCAAG+AGG + chr6_1:67758929-67758948 None:intergenic 30.0%
AGCAAATGGAGAAAAAAGTA+GGG + chr6_1:67759009-67759028 None:intergenic 30.0%
AAGCAAATGGAGAAAAAAGT+AGG + chr6_1:67759010-67759029 None:intergenic 30.0%
GTGGTGATTATTTGTGTTTG+AGG + chr6_1:67751729-67751748 None:intergenic 35.0%
TTATAGATTGAGGAGTTTGG+TGG + chr6_1:67751751-67751770 None:intergenic 35.0%
!! TTGAGTTGAGTGATGAAGAT+GGG + chr6_1:67751790-67751809 None:intergenic 35.0%
!! TTTGAGTTGAGTGATGAAGA+TGG + chr6_1:67751791-67751810 None:intergenic 35.0%
TCAATCATCAACATGGCAAA+TGG - chr6_1:67751828-67751847 Msa0891700:three_prime_UTR 35.0%
! GAAAAAGGAAGTGTATTTGG+AGG + chr6_1:67751883-67751902 None:intergenic 35.0%
TTGGTGTGACTTTCTTGATT+TGG + chr6_1:67752013-67752032 None:intergenic 35.0%
AAAGGATTCTTGTAACCGTT+TGG + chr6_1:67752305-67752324 None:intergenic 35.0%
TGTACCTTACCGTCATTTAA+CGG - chr6_1:67752364-67752383 Msa0891700:intron 35.0%
! CTTTTTCCACCGTTAAATGA+CGG + chr6_1:67752376-67752395 None:intergenic 35.0%
TGGAAAAAGCTGGTCAAAAT+TGG - chr6_1:67752387-67752406 Msa0891700:intron 35.0%
! CAAAATTGGATCCGTTTTGA+CGG - chr6_1:67752401-67752420 Msa0891700:intron 35.0%
ATGTACTTATCAGCACCATT+AGG + chr6_1:67752464-67752483 None:intergenic 35.0%
TCTATCTCTTTCTCTGTTTG+GGG - chr6_1:67752570-67752589 Msa0891700:intron 35.0%
!!! TCTTTGTCCTTGTCTTGTTT+TGG - chr6_1:67752672-67752691 Msa0891700:intron 35.0%
GATTTCACCAAAACAAGACA+AGG + chr6_1:67752682-67752701 None:intergenic 35.0%
GTCCAAAAATTGTCAAGAAG+TGG - chr6_1:67752955-67752974 Msa0891700:CDS 35.0%
! ATTTTCTTGCGATGAACCTA+AGG - chr6_1:67753407-67753426 Msa0891700:intron 35.0%
! AATTGTGAGGTCTTTTGTCT+TGG - chr6_1:67753527-67753546 Msa0891700:intron 35.0%
! TTGGTATGGGGTAAGATTTT+GGG - chr6_1:67753546-67753565 Msa0891700:intron 35.0%
ATTCTTGGGTACTTTAAGTG+GGG - chr6_1:67753775-67753794 Msa0891700:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG + chr6_1:67753824-67753843 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG + chr6_1:67753825-67753844 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + chr6_1:67753838-67753857 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr6_1:67754007-67754026 Msa0891700:intron 35.0%
AGTCGTATGAATATGATGCA+TGG - chr6_1:67754328-67754347 Msa0891700:intron 35.0%
ATGCCCTTTGATTATCAGTT+TGG - chr6_1:67754360-67754379 Msa0891700:intron 35.0%
TGCCCTTTGATTATCAGTTT+GGG - chr6_1:67754361-67754380 Msa0891700:intron 35.0%
! TACGTTACTTTGTTCATGGA+TGG + chr6_1:67754387-67754406 None:intergenic 35.0%
ATGGATCTTAGCGAATTTCT+AGG + chr6_1:67754504-67754523 None:intergenic 35.0%
AAAAGGACAAATTGTCGTGA+TGG + chr6_1:67754650-67754669 None:intergenic 35.0%
!!! TGACATAGTTTTGGTGTCAT+TGG + chr6_1:67755054-67755073 None:intergenic 35.0%
ATGACACCAAAACTATGTCA+TGG - chr6_1:67755054-67755073 Msa0891700:intron 35.0%
! AAGTTGGGTATGCCATTTAT+AGG + chr6_1:67755101-67755120 None:intergenic 35.0%
! CGAGATTTTTCTCAAATCAG+AGG - chr6_1:67755161-67755180 Msa0891700:intron 35.0%
ACATGTTGAGCAACATTGTA+GGG + chr6_1:67755361-67755380 None:intergenic 35.0%
TACATGTTGAGCAACATTGT+AGG + chr6_1:67755362-67755381 None:intergenic 35.0%
! TGTAACACCAATGATGATGT+AGG - chr6_1:67755378-67755397 Msa0891700:CDS 35.0%
TCATCAACCTACATCATCAT+TGG + chr6_1:67755388-67755407 None:intergenic 35.0%
TATGTCACGTGATAGTAGAT+AGG + chr6_1:67755592-67755611 None:intergenic 35.0%
! GTTCAATTTGCTCTTGAAAG+AGG - chr6_1:67755654-67755673 Msa0891700:intron 35.0%
CAATATTTCTTCCAGCGAAT+TGG + chr6_1:67756329-67756348 None:intergenic 35.0%
CAATTCGCTGGAAGAAATAT+TGG - chr6_1:67756327-67756346 Msa0891700:intron 35.0%
GGAAGAAATATTGGAAAGGA+TGG - chr6_1:67756336-67756355 Msa0891700:intron 35.0%
ATGTAGCTAAAAGCCTTTGT+TGG - chr6_1:67756405-67756424 Msa0891700:intron 35.0%
TTATTCTGCTCTTGGCAAAA+AGG + chr6_1:67756512-67756531 None:intergenic 35.0%
TATCAGGATTATTCTGCTCT+TGG + chr6_1:67756520-67756539 None:intergenic 35.0%
! GTTACATTAGATGCCATTTG+TGG - chr6_1:67756638-67756657 Msa0891700:intron 35.0%
ATCGGTTACCTAGAATCATT+TGG + chr6_1:67757011-67757030 None:intergenic 35.0%
CTTTATGAGTATCTTCCTCA+TGG - chr6_1:67757313-67757332 Msa0891700:intron 35.0%
TCATGGAATCATAGGGAATA+AGG + chr6_1:67757375-67757394 None:intergenic 35.0%
GCCACATCTGTTATAAATCA+TGG + chr6_1:67757392-67757411 None:intergenic 35.0%
!! GGACTTAGGTTTGTTATACT+TGG + chr6_1:67757788-67757807 None:intergenic 35.0%
TTGTTAGTTGAAAGGGACTT+AGG + chr6_1:67757802-67757821 None:intergenic 35.0%
CCCTTTCAACTAACAAATGT+TGG - chr6_1:67757806-67757825 Msa0891700:intron 35.0%
ATTGGCAGAAATTAAGTGTG+AGG + chr6_1:67757833-67757852 None:intergenic 35.0%
CTTCTTTGTTGGACACTTTA+GGG + chr6_1:67757938-67757957 None:intergenic 35.0%
TCTTCTTTGTTGGACACTTT+AGG + chr6_1:67757939-67757958 None:intergenic 35.0%
! CAAAGAAGAAATTTCAGGTG+GGG - chr6_1:67757950-67757969 Msa0891700:intron 35.0%
ATTTCAAAGGGGACCATTAA+AGG - chr6_1:67758017-67758036 Msa0891700:intron 35.0%
AACAATCAACTTGGAAAAGC+TGG - chr6_1:67758110-67758129 Msa0891700:intron 35.0%
! TCCTATTTGGGTTATGAATG+TGG - chr6_1:67758199-67758218 Msa0891700:intron 35.0%
ACCACATTCATAACCCAAAT+AGG + chr6_1:67758203-67758222 None:intergenic 35.0%
!! CAAGCTAAAGTTGATACACT+TGG - chr6_1:67758230-67758249 Msa0891700:intron 35.0%
CTTGGAGCAATATATGAAAG+AGG - chr6_1:67758248-67758267 Msa0891700:intron 35.0%
ACACAGAATCAGCATGAATT+AGG + chr6_1:67758416-67758435 None:intergenic 35.0%
TCTGCTTTGTAGATGTGAAT+TGG - chr6_1:67758760-67758779 Msa0891700:CDS 35.0%
ACATATTGCTAGAGATGGAT+AGG - chr6_1:67758786-67758805 Msa0891700:CDS 35.0%
! AAAGAGCATAATCAATGGCT+TGG - chr6_1:67758868-67758887 Msa0891700:CDS 35.0%
! CATAATCAATGGCTTGGAAT+GGG - chr6_1:67758874-67758893 Msa0891700:CDS 35.0%
AAATTGTGGACCATGAAGAT+GGG - chr6_1:67758903-67758922 Msa0891700:CDS 35.0%
! ATAGTATTGTCATTTGAGGC+AGG + chr6_1:67758980-67758999 None:intergenic 35.0%
TTCGAACGACATAAGTTGTT+CGG - chr6_1:67759061-67759080 Msa0891700:CDS 35.0%
!! TTGTGTTTTTCGGATGTGTA+TGG - chr6_1:67759113-67759132 Msa0891700:CDS 35.0%
AATACAAAAGTGAGGAAGGA+AGG + chr6_1:67759227-67759246 None:intergenic 35.0%
TGCAAGCAAACTTTGTTGAA+TGG - chr6_1:67759270-67759289 Msa0891700:five_prime_UTR 35.0%
! TTGAGTGATGAAGATGGGTT+TGG + chr6_1:67751785-67751804 None:intergenic 40.0%
CACACTCTCAATCATCAACA+TGG - chr6_1:67751821-67751840 Msa0891700:three_prime_UTR 40.0%
GTGTATTTGGAGGGTTTGAA+GGG + chr6_1:67751873-67751892 None:intergenic 40.0%
AGTGTATTTGGAGGGTTTGA+AGG + chr6_1:67751874-67751893 None:intergenic 40.0%
GTATTGAGAGGATGTTGTTG+TGG + chr6_1:67752141-67752160 None:intergenic 40.0%
GTTACAAGAATCCTTTCCCA+TGG - chr6_1:67752309-67752328 Msa0891700:intron 40.0%
CATTTAACGGTGGAAAAAGC+TGG - chr6_1:67752377-67752396 Msa0891700:intron 40.0%
GGAACTTATCACCGTCAAAA+CGG + chr6_1:67752415-67752434 None:intergenic 40.0%
GGTGGTACTATGTTTCCTAA+TGG - chr6_1:67752446-67752465 Msa0891700:intron 40.0%
! TGAGGTCTTTTGTCTTGGTA+TGG - chr6_1:67753532-67753551 Msa0891700:intron 40.0%
! GAGGTCTTTTGTCTTGGTAT+GGG - chr6_1:67753533-67753552 Msa0891700:intron 40.0%
! AGGTCTTTTGTCTTGGTATG+GGG - chr6_1:67753534-67753553 Msa0891700:intron 40.0%
! CTTGGTATGGGGTAAGATTT+TGG - chr6_1:67753545-67753564 Msa0891700:intron 40.0%
CCGGTTTAATTGACCTACTT+TGG - chr6_1:67753822-67753841 Msa0891700:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr6_1:67754008-67754027 Msa0891700:intron 40.0%
AAAATGTTAACGAGTGCCCT+CGG + chr6_1:67754231-67754250 None:intergenic 40.0%
GGCCCAAACTGATAATCAAA+GGG + chr6_1:67754366-67754385 None:intergenic 40.0%
TGGCCCAAACTGATAATCAA+AGG + chr6_1:67754367-67754386 None:intergenic 40.0%
AAGTGCATCTACAGTAGGAA+TGG - chr6_1:67754737-67754756 Msa0891700:CDS 40.0%
!!! TATGCTTTTTCCGGGTAATG+TGG - chr6_1:67754771-67754790 Msa0891700:CDS 40.0%
! TGTGCTGGTCACATGATTAA+AGG - chr6_1:67755312-67755331 Msa0891700:CDS 40.0%
! GTGCTGGTCACATGATTAAA+GGG - chr6_1:67755313-67755332 Msa0891700:CDS 40.0%
ATGTATGCAGGTTGCTAGTT+GGG - chr6_1:67755563-67755582 Msa0891700:intron 40.0%
TAACAGTGTCAATTGCACCA+AGG - chr6_1:67755613-67755632 Msa0891700:intron 40.0%
AACAGTGTCAATTGCACCAA+GGG - chr6_1:67755614-67755633 Msa0891700:intron 40.0%
!! AGAGGTGTTCCTGCAATTAT+TGG - chr6_1:67755672-67755691 Msa0891700:intron 40.0%
! GAGGTGTTCCTGCAATTATT+GGG - chr6_1:67755673-67755692 Msa0891700:intron 40.0%
AGGTGTTCCTGCAATTATTG+GGG - chr6_1:67755674-67755693 Msa0891700:intron 40.0%
AGAACAATGTGCCATGTCAA+AGG + chr6_1:67755736-67755755 None:intergenic 40.0%
CATATTCAGGCCATGGAATA+AGG + chr6_1:67755764-67755783 None:intergenic 40.0%
CTTATTCCATGGCCTGAATA+TGG - chr6_1:67755762-67755781 Msa0891700:intron 40.0%
ACTATACCATATTCAGGCCA+TGG + chr6_1:67755771-67755790 None:intergenic 40.0%
GATGTTTGTCCATGCTTCAT+AGG + chr6_1:67755956-67755975 None:intergenic 40.0%
GACAAACATCAGACAAGACA+CGG - chr6_1:67755966-67755985 Msa0891700:intron 40.0%
GCACAGACACTTCTAATCAA+AGG + chr6_1:67756078-67756097 None:intergenic 40.0%
! GTTGATAGAATTCTACGTCC+TGG - chr6_1:67756278-67756297 Msa0891700:intron 40.0%
ATAGAATTCTACGTCCTGGT+GGG - chr6_1:67756282-67756301 Msa0891700:intron 40.0%
TATTTCTTCCAGCGAATTGG+TGG + chr6_1:67756326-67756345 None:intergenic 40.0%
CGCTGGAAGAAATATTGGAA+AGG - chr6_1:67756332-67756351 Msa0891700:intron 40.0%
AGCACATACCATGCTTTATC+AGG + chr6_1:67756536-67756555 None:intergenic 40.0%
AGATGTGATAAAGGGTGAAG+AGG - chr6_1:67756731-67756750 Msa0891700:intron 40.0%
! GCACACTCATTTGATAGTAG+AGG + chr6_1:67756921-67756940 None:intergenic 40.0%
ATGAGTGTGCAGATCTTACA+AGG - chr6_1:67756931-67756950 Msa0891700:intron 40.0%
ATGAGTATCTTCCTCATGGA+TGG - chr6_1:67757317-67757336 Msa0891700:intron 40.0%
GGCGTGTATCCATTAAAGTT+TGG - chr6_1:67757468-67757487 Msa0891700:intron 40.0%
CAGGTGGGGAATTAAACAAT+TGG - chr6_1:67757964-67757983 Msa0891700:intron 40.0%
!! GGGGTTGATTTTAGTCTTTG+AGG + chr6_1:67757990-67758009 None:intergenic 40.0%
TTGAGGTGTGACACCTTTAA+TGG + chr6_1:67758033-67758052 None:intergenic 40.0%
TTGGAAAAGCTGGTAGATAC+AGG - chr6_1:67758120-67758139 Msa0891700:intron 40.0%
GACATGAATGCTTATTTGGG+TGG - chr6_1:67758152-67758171 Msa0891700:intron 40.0%
! TTGTTAAGAGTGTGTGTTGC+TGG + chr6_1:67758728-67758747 None:intergenic 40.0%
GGAAGACATATTGCTAGAGA+TGG - chr6_1:67758781-67758800 Msa0891700:CDS 40.0%
GATAGGATTCTTAGACCAGA+AGG - chr6_1:67758803-67758822 Msa0891700:CDS 40.0%
! GCATAATCAATGGCTTGGAA+TGG - chr6_1:67758873-67758892 Msa0891700:CDS 40.0%
CAAATTGTGGACCATGAAGA+TGG - chr6_1:67758902-67758921 Msa0891700:CDS 40.0%
TTTGCTTGCACTATCCCAAA+AGG + chr6_1:67759260-67759279 None:intergenic 40.0%
! TAGATTGAGGAGTTTGGTGG+TGG + chr6_1:67751748-67751767 None:intergenic 45.0%
!! GAAGGGTTTTGGTGAAGTTG+AGG + chr6_1:67751856-67751875 None:intergenic 45.0%
! TTGGAGGGTTTGAAGGGTTT+TGG + chr6_1:67751867-67751886 None:intergenic 45.0%
GGTGTAGTCAGTTAAAGAGG+GGG + chr6_1:67752174-67752193 None:intergenic 45.0%
GGGTGTAGTCAGTTAAAGAG+GGG + chr6_1:67752175-67752194 None:intergenic 45.0%
GGGGTGTAGTCAGTTAAAGA+GGG + chr6_1:67752176-67752195 None:intergenic 45.0%
!! TTCTTGTAACCGTTTGGTGC+TGG + chr6_1:67752299-67752318 None:intergenic 45.0%
CATGCCATGTCTCTACTTGT+GGG + chr6_1:67752335-67752354 None:intergenic 45.0%
ACCTTACCGTCATTTAACGG+TGG - chr6_1:67752367-67752386 Msa0891700:intron 45.0%
TCCACCGTTAAATGACGGTA+AGG + chr6_1:67752371-67752390 None:intergenic 45.0%
! GGTGATAAGTTCCGTTTTCC+TGG - chr6_1:67752422-67752441 Msa0891700:intron 45.0%
! GATAAGTTCCGTTTTCCTGG+TGG - chr6_1:67752425-67752444 Msa0891700:intron 45.0%
TAGTACCACCACCAGGAAAA+CGG + chr6_1:67752436-67752455 None:intergenic 45.0%
GTTCGAACTGCTGTTGATAC+TGG - chr6_1:67752524-67752543 Msa0891700:intron 45.0%
ATCTCTTTCTCTGTTTGGGG+TGG - chr6_1:67752573-67752592 Msa0891700:intron 45.0%
CTTGCTTTCACATTCGTCCA+AGG - chr6_1:67753008-67753027 Msa0891700:CDS 45.0%
TCTTGCGATGAACCTAAGGA+AGG - chr6_1:67753411-67753430 Msa0891700:intron 45.0%
GTAGGTCAATTAAACCGGGA+CGG + chr6_1:67753820-67753839 None:intergenic 45.0%
AAATGTTAACGAGTGCCCTC+GGG + chr6_1:67754230-67754249 None:intergenic 45.0%
GGTACAAGTGCATCTACAGT+AGG - chr6_1:67754732-67754751 Msa0891700:CDS 45.0%
ATCTACAGTAGGAATGGACC+TGG - chr6_1:67754743-67754762 Msa0891700:CDS 45.0%
!!! CTGGCTAGGTATGCTTTTTC+CGG - chr6_1:67754762-67754781 Msa0891700:CDS 45.0%
!!! TGGCTAGGTATGCTTTTTCC+GGG - chr6_1:67754763-67754782 Msa0891700:CDS 45.0%
GATTCAAGCTATGGCACCAA+TGG + chr6_1:67754965-67754984 None:intergenic 45.0%
! TGTGGTGGAGATTCAAGCTA+TGG + chr6_1:67754974-67754993 None:intergenic 45.0%
TGATGTGTGTGGATGTGTGT+GGG + chr6_1:67755007-67755026 None:intergenic 45.0%
TTGATGTGTGTGGATGTGTG+TGG + chr6_1:67755008-67755027 None:intergenic 45.0%
ATCCACACACATCAATGACC+AGG - chr6_1:67755013-67755032 Msa0891700:intron 45.0%
ATCCTGGTCATTGATGTGTG+TGG + chr6_1:67755018-67755037 None:intergenic 45.0%
AATGACCAGGATTTCCCCAA+TGG - chr6_1:67755026-67755045 Msa0891700:intron 45.0%
!! TTGGTGTCATTGGTGCCATT+GGG + chr6_1:67755044-67755063 None:intergenic 45.0%
!! TTTGGTGTCATTGGTGCCAT+TGG + chr6_1:67755045-67755064 None:intergenic 45.0%
GTTGAGCAACATTGTAGGGA+TGG + chr6_1:67755357-67755376 None:intergenic 45.0%
GATGTATGCAGGTTGCTAGT+TGG - chr6_1:67755562-67755581 Msa0891700:intron 45.0%
TGTATGCAGGTTGCTAGTTG+GGG - chr6_1:67755564-67755583 Msa0891700:intron 45.0%
TGTGCTTCATGAGTATCCCT+TGG + chr6_1:67755633-67755652 None:intergenic 45.0%
GCAAAGACCCCAATAATTGC+AGG + chr6_1:67755684-67755703 None:intergenic 45.0%
!! TCAAAGGCTCTAGAAGGGAA+AGG + chr6_1:67755720-67755739 None:intergenic 45.0%
!! CCATGTCAAAGGCTCTAGAA+GGG + chr6_1:67755725-67755744 None:intergenic 45.0%
GATAGAATTCTACGTCCTGG+TGG - chr6_1:67756281-67756300 Msa0891700:intron 45.0%
GATAGAATCCAATACCCACC+AGG + chr6_1:67756299-67756318 None:intergenic 45.0%
!! GGTGGGTATTGGATTCTATC+TGG - chr6_1:67756299-67756318 Msa0891700:intron 45.0%
CAAGCATAAGACCATCCATG+AGG + chr6_1:67757331-67757350 None:intergenic 45.0%
! TTGTTGGACACTTTAGGGAG+TGG + chr6_1:67757933-67757952 None:intergenic 45.0%
GACTAAAATCAACCCCACCT+AGG - chr6_1:67757994-67758013 Msa0891700:intron 45.0%
AACCCCACCTAGGATTTCAA+AGG - chr6_1:67758004-67758023 Msa0891700:intron 45.0%
ACCCCACCTAGGATTTCAAA+GGG - chr6_1:67758005-67758024 Msa0891700:intron 45.0%
!! TCCCCTTTGAAATCCTAGGT+GGG + chr6_1:67758010-67758029 None:intergenic 45.0%
!! ATGGTCCCCTTTGAAATCCT+AGG + chr6_1:67758014-67758033 None:intergenic 45.0%
GGAATGGGAGAGTCAAATTG+TGG - chr6_1:67758889-67758908 Msa0891700:CDS 45.0%
TTTCAAGAGGCCCATCTTCA+TGG + chr6_1:67758916-67758935 None:intergenic 45.0%
! ATTGTCATTTGAGGCAGGAG+AGG + chr6_1:67758975-67758994 None:intergenic 45.0%
TTCGGATGTGTATGGTGATC+TGG - chr6_1:67759121-67759140 Msa0891700:CDS 45.0%
TGTGTATGGTGATCTGGTGT+TGG - chr6_1:67759127-67759146 Msa0891700:CDS 45.0%
!!! ATAAAAATTTTGTAAAAATT+AGG + chr6_1:67753344-67753363 None:intergenic 5.0%
!!! TTTAATGTTATTTTTTTAAT+GGG + chr6_1:67755288-67755307 None:intergenic 5.0%
!! TGAAAAAAAAAATATTTAAT+TGG + chr6_1:67757851-67757870 None:intergenic 5.0%
GTTGTTGTGGACGTGGTTGT+TGG + chr6_1:67752128-67752147 None:intergenic 50.0%
AGAGGATGTTGTTGTGGACG+TGG + chr6_1:67752135-67752154 None:intergenic 50.0%
! TTAAAGAGGGGGTGCATGGT+GGG + chr6_1:67752163-67752182 None:intergenic 50.0%
! TCAGTTAAAGAGGGGGTGCA+TGG + chr6_1:67752167-67752186 None:intergenic 50.0%
! GGGGGTGTAGTCAGTTAAAG+AGG + chr6_1:67752177-67752196 None:intergenic 50.0%
! TCTTAGGACAGTGTCGTTCG+CGG + chr6_1:67752250-67752269 None:intergenic 50.0%
TGTCGTGTTCCAGCACCAAA+CGG - chr6_1:67752287-67752306 Msa0891700:intron 50.0%
TGTCTCTACTTGTGGGCCAT+GGG + chr6_1:67752328-67752347 None:intergenic 50.0%
ATGTCTCTACTTGTGGGCCA+TGG + chr6_1:67752329-67752348 None:intergenic 50.0%
ATGGCCCACAAGTAGAGACA+TGG - chr6_1:67752328-67752347 Msa0891700:intron 50.0%
CCATGCCATGTCTCTACTTG+TGG + chr6_1:67752336-67752355 None:intergenic 50.0%
CCACAAGTAGAGACATGGCA+TGG - chr6_1:67752333-67752352 Msa0891700:intron 50.0%
! AAGTTCCGTTTTCCTGGTGG+TGG - chr6_1:67752428-67752447 Msa0891700:intron 50.0%
GGAAACATAGTACCACCACC+AGG + chr6_1:67752443-67752462 None:intergenic 50.0%
! ACTGCTGTTGATACTGGCTG+TGG - chr6_1:67752530-67752549 Msa0891700:intron 50.0%
! CTGCTGTTGATACTGGCTGT+GGG - chr6_1:67752531-67752550 Msa0891700:intron 50.0%
! TGCTGTTGATACTGGCTGTG+GGG - chr6_1:67752532-67752551 Msa0891700:intron 50.0%
ATAACATACTCCCTCCGTCC+CGG - chr6_1:67753803-67753822 Msa0891700:intron 50.0%
GTCAATTAAACCGGGACGGA+GGG + chr6_1:67753816-67753835 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr6_1:67754012-67754031 Msa0891700:intron 50.0%
TTCCTTAACCAGTACCCCGA+GGG - chr6_1:67754212-67754231 Msa0891700:intron 50.0%
AATGTTAACGAGTGCCCTCG+GGG + chr6_1:67754229-67754248 None:intergenic 50.0%
! CGGAAAAAGCATACCTAGCC+AGG + chr6_1:67754764-67754783 None:intergenic 50.0%
!! GAGTAGCACTTTGGTGCCAT+TGG - chr6_1:67754946-67754965 Msa0891700:intron 50.0%
TGTGTGGGGATGTATGTGTG+TGG + chr6_1:67754992-67755011 None:intergenic 50.0%
GATGTGTGTGGATGTGTGTG+GGG + chr6_1:67755006-67755025 None:intergenic 50.0%
!! TGGTGTCATTGGTGCCATTG+GGG + chr6_1:67755043-67755062 None:intergenic 50.0%
GGGATGGATCGAATCTCTGA+CGG + chr6_1:67755341-67755360 None:intergenic 50.0%
!! CCCTTCTAGAGCCTTTGACA+TGG - chr6_1:67755722-67755741 Msa0891700:intron 50.0%
!! GCCATGTCAAAGGCTCTAGA+AGG + chr6_1:67755726-67755745 None:intergenic 50.0%
! GTTCTCGCTGCCTTATTCCA+TGG - chr6_1:67755751-67755770 Msa0891700:intron 50.0%
! TTCTACGTCCTGGTGGGTAT+TGG - chr6_1:67756288-67756307 Msa0891700:intron 50.0%
TATCTGGTCCACCAATTCGC+TGG - chr6_1:67756315-67756334 Msa0891700:intron 50.0%
TGGAAGGGAGTCTCCACAAA+TGG + chr6_1:67756654-67756673 None:intergenic 50.0%
!! CCCCTTTGAAATCCTAGGTG+GGG + chr6_1:67758009-67758028 None:intergenic 50.0%
CCCCACCTAGGATTTCAAAG+GGG - chr6_1:67758006-67758025 Msa0891700:intron 50.0%
!! GTCCCCTTTGAAATCCTAGG+TGG + chr6_1:67758011-67758030 None:intergenic 50.0%
! GTATGGTGATCTGGTGTTGG+AGG - chr6_1:67759130-67759149 Msa0891700:CDS 50.0%
!! GGTGCATGGTGGGTATTGAG+AGG + chr6_1:67752153-67752172 None:intergenic 55.0%
! GTTAAAGAGGGGGTGCATGG+TGG + chr6_1:67752164-67752183 None:intergenic 55.0%
! TGTGTTTGAGAGAGCGCGTG+TGG + chr6_1:67752208-67752227 None:intergenic 55.0%
CTACTTGTGGGCCATGGGAA+AGG + chr6_1:67752323-67752342 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG + chr6_1:67753817-67753836 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr6_1:67754016-67754035 Msa0891700:intron 55.0%
!! GGTCTTGTTAACCAGTGCCC+CGG - chr6_1:67754081-67754100 Msa0891700:intron 55.0%
! GTCTTGTTAACCAGTGCCCC+GGG - chr6_1:67754082-67754101 Msa0891700:intron 55.0%
TCTTGTTAACCAGTGCCCCG+GGG - chr6_1:67754083-67754102 Msa0891700:intron 55.0%
TGCTTCCTTAACCAGTGCCC+CGG + chr6_1:67754103-67754122 None:intergenic 55.0%
CTTCCTTAACCAGTACCCCG+AGG - chr6_1:67754211-67754230 Msa0891700:intron 55.0%
CAGTAGGAATGGACCTGGCT+AGG - chr6_1:67754748-67754767 Msa0891700:CDS 55.0%
GTGGGGATGTATGTGTGTGG+TGG + chr6_1:67754989-67755008 None:intergenic 55.0%
!! TGGTGCCATTGGGGAAATCC+TGG + chr6_1:67755034-67755053 None:intergenic 55.0%
AGCGCGTGTGGTCTTCACAG+GGG + chr6_1:67752196-67752215 None:intergenic 60.0%
GAGCGCGTGTGGTCTTCACA+GGG + chr6_1:67752197-67752216 None:intergenic 60.0%
AGAGCGCGTGTGGTCTTCAC+AGG + chr6_1:67752198-67752217 None:intergenic 60.0%
! CTCTGTTTGGGGTGGCACGT+CGG - chr6_1:67752581-67752600 Msa0891700:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr6_1:67754015-67754034 Msa0891700:intron 60.0%
ATTCCGGGACGGAGGGAGTA+AGG - chr6_1:67754023-67754042 Msa0891700:intron 60.0%
TGTCCTTACTCCCTCCGTCC+CGG + chr6_1:67754029-67754048 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG + chr6_1:67754101-67754120 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG + chr6_1:67754102-67754121 None:intergenic 60.0%
!! TGCCCTCGGGGTACTGGTTA+AGG + chr6_1:67754217-67754236 None:intergenic 60.0%
GCGCGTGTGGTCTTCACAGG+GGG + chr6_1:67752195-67752214 None:intergenic 65.0%
AACGAGTGCCCTCGGGGTAC+TGG + chr6_1:67754223-67754242 None:intergenic 65.0%
TAACCAGTGCCCCGGGGCAC+TGG - chr6_1:67754089-67754108 Msa0891700:intron 70.0%
TAACCAGTGCCCCGGGGCAC+TGG + chr6_1:67754089-67754108 None:intergenic 70.0%
!! GTGCCCCGGGGCACTGGTTA+AGG - chr6_1:67754095-67754114 Msa0891700:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 67751726 67759331 67751726 ID=Msa0891700;Name=Msa0891700
chr6_1 mRNA 67751726 67759331 67751726 ID=Msa0891700-mRNA-1;Parent=Msa0891700;Name=Msa0891700-mRNA-1;_AED=0.04;_eAED=0.04;_QI=114|1|1|1|1|1|6|328|638
chr6_1 exon 67751726 67752285 67751726 ID=Msa0891700-mRNA-1:exon:12043;Parent=Msa0891700-mRNA-1
chr6_1 exon 67752603 67752680 67752603 ID=Msa0891700-mRNA-1:exon:12042;Parent=Msa0891700-mRNA-1
chr6_1 exon 67752763 67753155 67752763 ID=Msa0891700-mRNA-1:exon:12041;Parent=Msa0891700-mRNA-1
chr6_1 exon 67754511 67754799 67754511 ID=Msa0891700-mRNA-1:exon:12040;Parent=Msa0891700-mRNA-1
chr6_1 exon 67755274 67755484 67755274 ID=Msa0891700-mRNA-1:exon:12039;Parent=Msa0891700-mRNA-1
chr6_1 exon 67758504 67759331 67758504 ID=Msa0891700-mRNA-1:exon:12038;Parent=Msa0891700-mRNA-1
chr6_1 five_prime_UTR 67759218 67759331 67759218 ID=Msa0891700-mRNA-1:five_prime_utr;Parent=Msa0891700-mRNA-1
chr6_1 CDS 67758504 67759217 67758504 ID=Msa0891700-mRNA-1:cds;Parent=Msa0891700-mRNA-1
chr6_1 CDS 67755274 67755484 67755274 ID=Msa0891700-mRNA-1:cds;Parent=Msa0891700-mRNA-1
chr6_1 CDS 67754511 67754799 67754511 ID=Msa0891700-mRNA-1:cds;Parent=Msa0891700-mRNA-1
chr6_1 CDS 67752763 67753155 67752763 ID=Msa0891700-mRNA-1:cds;Parent=Msa0891700-mRNA-1
chr6_1 CDS 67752603 67752680 67752603 ID=Msa0891700-mRNA-1:cds;Parent=Msa0891700-mRNA-1
chr6_1 CDS 67752054 67752285 67752054 ID=Msa0891700-mRNA-1:cds;Parent=Msa0891700-mRNA-1
chr6_1 three_prime_UTR 67751726 67752053 67751726 ID=Msa0891700-mRNA-1:three_prime_utr;Parent=Msa0891700-mRNA-1
Gene Sequence

>Msa0891700

ATGGCAAATGGTACCTCAACTTCACCAAAACCCTTCAAACCCTCCAAATACACTTCCTTTTTCAACTGCAAAAAAACAAATCTTTACTCTTTCATAGCTCTCCTTTGCATCATTTCATACTTTTTAGGCTCATACCAAAACAACAACACTACATCAACTAACAAAAATATCCAAATCAAGAAAGTCACACCAAAATGTCTCCAAAAAAATCAAAATCCAAAAACAACAAACACAAAAACAAAAACAACCAACTTAGATTTCTTCTCACATCACAACTTAACAAATCCAACAACCACGTCCACAACAACATCCTCTCAATACCCACCATGCACCCCCTCTTTAACTGACTACACCCCCTGTGAAGACCACACGCGCTCTCTCAAACACACGCGCGACAGAATGATATACCGCGAACGACACTGTCCTAAGAAACATGAAATCTTAAAGTGTCGTGTTCCAGCACCAAACGGTTACAAGAATCCTTTCCCATGGCCCACAAGTAGAGACATGGCATGGTATGCAAATGTACCTTACCGTCATTTAACGGTGGAAAAAGCTGGTCAAAATTGGATCCGTTTTGACGGTGATAAGTTCCGTTTTCCTGGTGGTGGTACTATGTTTCCTAATGGTGCTGATAAGTACATTGATGATATTGGGAAGTTGATTAATCTTGAAGATGGTTCTGTTCGAACTGCTGTTGATACTGGCTGTGGGGTTGCTAGTTGGGGAGCCTATCTACTATCACGTGACATATTAACAGTGTCAATTGCACCAAGGGATACTCATGAAGCACAAGTTCAATTTGCTCTTGAAAGAGGTGTTCCTGCAATTATTGGGGTCTTTGCTTCAAAGAGATTACCTTTCCCTTCTAGAGCCTTTGACATGGCACATTGTTCTCGCTGCCTTATTCCATGGCCTGAATATGATGGACTTTATCTAAATGAAGTTGATAGAATTCTACGTCCTGGTGGGTATTGGATTCTATCTGGTCCACCAATTCGCTGGAAGAAATATTGGAAAGGATGGGAAAGAACAAAAGAAGACTTGAATGAAGAGCAAACCAAAATTGAGAATGTAGCTAAAAGCCTTTGTTGGAATAAAATAGTGGAGAAAGGTGATATTGCTATTTGGCAGAAACCAAAAAATCATTTAGATTGCAAATTCACTCAAAATAGGCCTTTTTGCCAAGAGCAGAATAATCCTGATAAAGCATGGTACACAAACATGCAAACATGTTTAAATCCACTCCCTAAAGTGTCCAACAAAGAAGAAATTTCAGGTGGGGAATTAAACAATTGGCCTCAAAGACTAAAATCAACCCCACCTAGGATTTCAAAGGGGACCATTAAAGGTGTCACACCTCAAACATTCTCAAAAGACAATCAACTATGGAACAAAAGAGTATCATATTACAAAAAAGTTAACAATCAACTTGGAAAAGCTGGTAGATACAGGAACCTATTAGACATGAATGCTTATTTGGGTGGATTTGCAGCTTCACTTGTTAAATATCCTATTTGGGTTATGAATGTGGTTCCTATTCAAGCTAAAGTTGATACACTTGGAGCAATATATGAAAGAGGGTTGATTGGAATGTATCATAATTGGTGTGAAGCTATGTCTACTTATCCTAGAACTTATGACCTAATTCATGCTGATTCTGTGTTTAGCCTTTATAATGACAGATGTGAATTGGAAGACATATTGCTAGAGATGGATAGGATTCTTAGACCAGAAGGAAGTGTAATAATTAGAGATGATGTTGATATATTGGTCAAAGTAAAGAGCATAATCAATGGCTTGGAATGGGAGAGTCAAATTGTGGACCATGAAGATGGGCCTCTTGAAAGAGAGAAACTTTTATTTGCTGTGAAGAAATATTGGACCTCTCCTGCCTCAAATGACAATACTATTTAG
Protein sequence

>Msa0891700

MANGTSTSPKPFKPSKYTSFFNCKKTNLYSFIALLCIISYFLGSYQNNNTTSTNKNIQIKKVTPKCLQKNQNPKTTNTKTKTTNLDFFSHHNLTNPTTTSTTTSSQYPPCTPSLTDYTPCEDHTRSLKHTRDRMIYRERHCPKKHEILKCRVPAPNGYKNPFPWPTSRDMAWYANVPYRHLTVEKAGQNWIRFDGDKFRFPGGGTMFPNGADKYIDDIGKLINLEDGSVRTAVDTGCGVASWGAYLLSRDILTVSIAPRDTHEAQVQFALERGVPAIIGVFASKRLPFPSRAFDMAHCSRCLIPWPEYDGLYLNEVDRILRPGGYWILSGPPIRWKKYWKGWERTKEDLNEEQTKIENVAKSLCWNKIVEKGDIAIWQKPKNHLDCKFTQNRPFCQEQNNPDKAWYTNMQTCLNPLPKVSNKEEISGGELNNWPQRLKSTPPRISKGTIKGVTPQTFSKDNQLWNKRVSYYKKVNNQLGKAGRYRNLLDMNAYLGGFAASLVKYPIWVMNVVPIQAKVDTLGAIYERGLIGMYHNWCEAMSTYPRTYDLIHADSVFSLYNDRCELEDILLEMDRILRPEGSVIIRDDVDILVKVKSIINGLEWESQIVDHEDGPLEREKLLFAVKKYWTSPASNDNTI*