Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923480 | XP_027190237.1 | 78.571 | 70 | 8 | 2 | 28 | 96 | 97 | 160 | 1.53e-25 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923480 | sp|P26690|6DCS_SOYBN | 63.158 | 57 | 20 | 1 | 41 | 96 | 104 | 160 | 8.89e-18 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0313960 | Msa0923480 | 0.915709 | 4.264244e-85 | -8.615850e-47 |
| Msa0534230 | Msa0923480 | 0.898842 | 3.568014e-77 | -8.615850e-47 |
| Msa0923480 | Msa0986280 | 0.831028 | 2.105554e-55 | -8.615850e-47 |
| Msa0923480 | Msa1226990 | 0.878951 | 1.852811e-69 | -8.615850e-47 |
| Msa0923480 | Msa1388510 | 0.801335 | 9.452287e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923480 | MtrunA17_Chr3g0121001 | 78.571 | 70 | 8 | 2 | 28 | 96 | 98 | 161 | 6.43e-29 | 110 |
| Msa0923480 | MtrunA17_Chr3g0131301 | 80.952 | 63 | 12 | 0 | 151 | 213 | 591 | 653 | 1.40e-26 | 107 |
| Msa0923480 | MtrunA17_Chr3g0131291 | 68.254 | 63 | 20 | 0 | 151 | 213 | 517 | 579 | 1.37e-20 | 90.1 |
| Msa0923480 | MtrunA17_Chr1g0173621 | 64.912 | 57 | 19 | 1 | 41 | 96 | 105 | 161 | 6.49e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923480 | AT1G59960.1 | 47.368 | 57 | 29 | 1 | 41 | 96 | 106 | 162 | 1.46e-12 | 66.2 |
Find 91 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGGAAAACAAGTGTATT+TGG | 0.188508 | 6_2:-63967640 | Msa0923480:five_prime_UTR |
| ACTTCACCTGGTTTAGTAAT+TGG | 0.192844 | 6_2:+63964060 | None:intergenic |
| TACACATGACCTTCAATATT+AGG | 0.260645 | 6_2:-63962072 | None:intergenic |
| GCATGTCCTCTATTGGTAAT+TGG | 0.274613 | 6_2:-63967939 | Msa0923480:five_prime_UTR |
| TATTGAAGGTCATGTGTAAA+TGG | 0.285641 | 6_2:+63962077 | None:intergenic |
| GAAAAGCATAAGAGAGAGAT+TGG | 0.315271 | 6_2:-63963449 | Msa0923480:CDS |
| TAGACATAATTATCATGATA+TGG | 0.316274 | 6_2:-63965936 | Msa0923480:five_prime_UTR |
| CCTCTATTGGTAATTGGAAT+AGG | 0.324320 | 6_2:-63967933 | Msa0923480:five_prime_UTR |
| TTCCAATGCTCAATGTTGTT+TGG | 0.332869 | 6_2:-63965698 | Msa0923480:five_prime_UTR |
| ACAATCTCTGATACTTCAAT+AGG | 0.347637 | 6_2:+63964030 | None:intergenic |
| CCGTTCCTCCTTTGCATTAG+TGG | 0.351627 | 6_2:+63962157 | None:intergenic |
| TAAGATCTAATATTCAAATA+TGG | 0.361187 | 6_2:-63965838 | Msa0923480:five_prime_UTR |
| AGCTTCTATTCTTTGGGTGC+AGG | 0.364696 | 6_2:-63965863 | Msa0923480:five_prime_UTR |
| TGTGGAAAACAAGTGTATTT+GGG | 0.366345 | 6_2:-63967639 | Msa0923480:intron |
| AAAAGCGGTGAATTGGAGTT+TGG | 0.377599 | 6_2:+63962109 | None:intergenic |
| TTTCCACACTCAATGGTTGA+TGG | 0.380251 | 6_2:+63963399 | None:intergenic |
| GCATAAAGTTTCAACTTTGA+AGG | 0.381925 | 6_2:-63965729 | Msa0923480:five_prime_UTR |
| ATGTATTGAGGTTTGGTTGA+TGG | 0.386614 | 6_2:-63965484 | Msa0923480:five_prime_UTR |
| CGCAGAGGAAACAGAAGATC+AGG | 0.387361 | 6_2:+63963518 | None:intergenic |
| TAGAGTTGTTGATGAAGGTT+AGG | 0.394990 | 6_2:-63966193 | Msa0923480:five_prime_UTR |
| AACTTGGTATATATCAGATA+TGG | 0.395439 | 6_2:-63963960 | Msa0923480:CDS |
| CGTTCCTCCTTTGCATTAGT+GGG | 0.415154 | 6_2:+63962158 | None:intergenic |
| AATCTAAAGTGATCCTCTTC+AGG | 0.416483 | 6_2:-63967894 | Msa0923480:intron |
| AAACACAATGTATTGAGGTT+TGG | 0.421745 | 6_2:-63965491 | Msa0923480:five_prime_UTR |
| TTGGCCAATGGATCAAAATA+AGG | 0.425035 | 6_2:+63964079 | None:intergenic |
| TGCGCCTCTTCAAAATTGAT+TGG | 0.426096 | 6_2:-63965673 | Msa0923480:five_prime_UTR |
| GAGAGGGACGAAAGAGAGAA+AGG | 0.428730 | 6_2:-63968170 | Msa0923480:five_prime_UTR |
| CTACTCTGCAGAAATCTCTA+AGG | 0.431594 | 6_2:-63964219 | Msa0923480:intron |
| AAAAGCATAAGAGAGAGATT+GGG | 0.443286 | 6_2:-63963448 | Msa0923480:CDS |
| AAGTCATGCATGTCCTCTAT+TGG | 0.444684 | 6_2:-63967946 | Msa0923480:five_prime_UTR |
| CAATCTCTGATACTTCAATA+GGG | 0.455333 | 6_2:+63964031 | None:intergenic |
| ATGATCTTGGTGGCCGTCCT+AGG | 0.459779 | 6_2:-63965134 | Msa0923480:CDS |
| CCTATTCCAATTACCAATAG+AGG | 0.467383 | 6_2:+63967933 | None:intergenic |
| AATTGTAATTCCTACCTTTG+AGG | 0.471415 | 6_2:-63964810 | Msa0923480:CDS |
| GATTGTGGAATTTGATATGA+AGG | 0.479491 | 6_2:-63964013 | Msa0923480:CDS |
| CAAATTATTGCAAATTGTCA+TGG | 0.482936 | 6_2:-63965614 | Msa0923480:five_prime_UTR |
| GCTTATAGAGTTGTTGATGA+AGG | 0.484797 | 6_2:-63966198 | Msa0923480:five_prime_UTR |
| AGAATCATACCTAATATTGA+AGG | 0.492848 | 6_2:+63962063 | None:intergenic |
| TGAGCAAGAGCAATTCTTCA+AGG | 0.502577 | 6_2:-63962282 | Msa0923480:CDS |
| GACAGAAGGGAAGATGATCT+TGG | 0.506460 | 6_2:-63965147 | Msa0923480:CDS |
| GTTGATGAAGGTTAGGAATG+AGG | 0.513138 | 6_2:-63966186 | Msa0923480:intron |
| CCGTCCTAGGAGCATTGTGC+AGG | 0.514421 | 6_2:-63965121 | Msa0923480:intron |
| ATCGGTGCAGATCGGAGTGT+TGG | 0.515737 | 6_2:+63968124 | None:intergenic |
| GAGAGAAAGAGATGAAAGAG+AGG | 0.516056 | 6_2:-63968207 | Msa0923480:five_prime_UTR |
| AGGATAACTCTGATGCAAAT+CGG | 0.518725 | 6_2:+63968106 | None:intergenic |
| TGGAAATGGTTGCTGCAGAT+TGG | 0.522261 | 6_2:-63965179 | Msa0923480:CDS |
| GAAGGGTGTGTGGACATCAT+TGG | 0.524351 | 6_2:-63963995 | Msa0923480:CDS |
| GGAGTAGAGAAAGTTGAAGA+AGG | 0.530462 | 6_2:-63965995 | Msa0923480:five_prime_UTR |
| TCAACCTGCACAATGCTCCT+AGG | 0.532591 | 6_2:+63965117 | None:intergenic |
| TAAAAGAAATGCAAAGGAAG+AGG | 0.532671 | 6_2:-63962237 | Msa0923480:CDS |
| AGTAGAAACACAATGTATTG+AGG | 0.533857 | 6_2:-63965496 | Msa0923480:five_prime_UTR |
| ATAGGGTATTTAACTTCACC+TGG | 0.535676 | 6_2:+63964048 | None:intergenic |
| TGTTTGTGATGCAGGGATTG+TGG | 0.537930 | 6_2:-63967657 | Msa0923480:intron |
| TTCTAGATCAGATGCCTCAA+AGG | 0.539627 | 6_2:+63964796 | None:intergenic |
| GTGTTGGACGGCGAGGTCGA+CGG | 0.546335 | 6_2:+63968140 | None:intergenic |
| AAGGTGAAGAAGACAACTAC+TGG | 0.547743 | 6_2:-63962182 | Msa0923480:CDS |
| TATTGAAGTATCAGAGATTG+TGG | 0.554195 | 6_2:-63964028 | Msa0923480:CDS |
| GAGAAAGAGATGAAAGAGAG+GGG | 0.554499 | 6_2:-63968205 | Msa0923480:five_prime_UTR |
| AACCAAACAACATTGAGCAT+TGG | 0.555868 | 6_2:+63965696 | None:intergenic |
| AGAGGGACGAAAGAGAGAAA+GGG | 0.556648 | 6_2:-63968169 | Msa0923480:five_prime_UTR |
| CATTGGCCAATTACTAAACC+AGG | 0.561140 | 6_2:-63964066 | Msa0923480:CDS |
| CTGGTTTAGTAATTGGCCAA+TGG | 0.564395 | 6_2:+63964067 | None:intergenic |
| AGAGAAAGAGATGAAAGAGA+GGG | 0.565885 | 6_2:-63968206 | Msa0923480:five_prime_UTR |
| ATTGGTTGAGATCTGACAGA+AGG | 0.589843 | 6_2:-63965161 | Msa0923480:CDS |
| GCAGCAGGAAGAGCGTGAGA+AGG | 0.590681 | 6_2:-63962201 | Msa0923480:CDS |
| AAGGAGATGAGAAAGAAACT+AGG | 0.593005 | 6_2:-63965450 | Msa0923480:five_prime_UTR |
| TACTGGTCCCACTAATGCAA+AGG | 0.596786 | 6_2:-63962165 | Msa0923480:CDS |
| CCACTAATGCAAAGGAGGAA+CGG | 0.598770 | 6_2:-63962157 | Msa0923480:CDS |
| AGATCAGATGCCTCAAAGGT+AGG | 0.602073 | 6_2:+63964800 | None:intergenic |
| TAATTTGGTTCATTTGACTG+AGG | 0.602330 | 6_2:-63965521 | Msa0923480:five_prime_UTR |
| ACCATTTCCATAAAAGCAAG+TGG | 0.602451 | 6_2:+63965192 | None:intergenic |
| TTGGTTGAGATCTGACAGAA+GGG | 0.602460 | 6_2:-63965160 | Msa0923480:CDS |
| GTTGATGGATAATGTGACAA+AGG | 0.605584 | 6_2:-63965469 | Msa0923480:five_prime_UTR |
| TGATGCAAATCGGTGCAGAT+CGG | 0.607076 | 6_2:+63968116 | None:intergenic |
| AAGAGCAATTCTTCAAGGAA+CGG | 0.610038 | 6_2:-63962277 | Msa0923480:CDS |
| CCATGATAAAAGAAATGCAA+AGG | 0.612516 | 6_2:-63962243 | Msa0923480:CDS |
| AAAGCATAAGAGAGAGATTG+GGG | 0.614356 | 6_2:-63963447 | Msa0923480:CDS |
| GATCGGAGTGTTGGACGGCG+AGG | 0.614383 | 6_2:+63968133 | None:intergenic |
| GATCTAATATTCAAATATGG+AGG | 0.617365 | 6_2:-63965835 | Msa0923480:five_prime_UTR |
| GTGCAGATCGGAGTGTTGGA+CGG | 0.620791 | 6_2:+63968128 | None:intergenic |
| GAAACAGAAGATCAGGCAAG+TGG | 0.636731 | 6_2:+63963525 | None:intergenic |
| TGGTCCCACTAATGCAAAGG+AGG | 0.636844 | 6_2:-63962162 | Msa0923480:CDS |
| ACTCCATCAACCATTGAGTG+TGG | 0.639001 | 6_2:-63963402 | Msa0923480:CDS |
| GGGGAGCTACAGCTCCGTGT+CGG | 0.653257 | 6_2:-63963428 | Msa0923480:CDS |
| CCTGCACAATGCTCCTAGGA+CGG | 0.659595 | 6_2:+63965121 | None:intergenic |
| AGAAAGAGATGAAAGAGAGG+GGG | 0.666227 | 6_2:-63968204 | Msa0923480:five_prime_UTR |
| ATTGTGGAATTTGATATGAA+GGG | 0.667822 | 6_2:-63964012 | Msa0923480:CDS |
| AGAAGGGAAGATGATCTTGG+TGG | 0.671197 | 6_2:-63965144 | Msa0923480:CDS |
| TTGGACGGCGAGGTCGACGG+CGG | 0.673722 | 6_2:+63968143 | None:intergenic |
| AATTTGATATGAAGGGTGTG+TGG | 0.685210 | 6_2:-63964005 | Msa0923480:CDS |
| GTTGATGGAGTGATCCGACA+CGG | 0.688205 | 6_2:+63963414 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTTTTGTTATTAAAAT+TGG | - | chr6_2:63962742-63962761 | Msa0923480:intron | 10.0% |
| !!! | TTTTGATTAAATTTAAATTC+TGG | - | chr6_2:63965302-63965321 | Msa0923480:intron | 10.0% |
| !!! | TAATAGTATTTTTCTTTAAA+CGG | - | chr6_2:63966491-63966510 | Msa0923480:intron | 10.0% |
| !!! | CTATTTTTTATCAGAAATTT+TGG | + | chr6_2:63963472-63963491 | None:intergenic | 15.0% |
| !! | TTTGAAGAAATTATTAAAGA+TGG | + | chr6_2:63963547-63963566 | None:intergenic | 15.0% |
| !! | ATAATTAAAGCAAGAAAAAT+GGG | + | chr6_2:63964015-63964034 | None:intergenic | 15.0% |
| !! | TATAATTAAAGCAAGAAAAA+TGG | + | chr6_2:63964016-63964035 | None:intergenic | 15.0% |
| !! | TAAGATCTAATATTCAAATA+TGG | - | chr6_2:63964459-63964478 | Msa0923480:intron | 15.0% |
| !!! | AATGTCTCATTTTTTTAAAA+TGG | - | chr6_2:63965013-63965032 | Msa0923480:intron | 15.0% |
| !! | TCAAAATATTTGAGTAAAAA+TGG | - | chr6_2:63965558-63965577 | Msa0923480:five_prime_UTR | 15.0% |
| !! | AAGAAAAATACTATTATGAT+TGG | + | chr6_2:63966487-63966506 | None:intergenic | 15.0% |
| !! | GATTTATAATAAACACAAAT+TGG | + | chr6_2:63967742-63967761 | None:intergenic | 15.0% |
| !! | TCATGAAAAACAAAACAAAA+CGG | + | chr6_2:63962326-63962345 | None:intergenic | 20.0% |
| !! | TAAAAAAAATAAACCTGAAG+AGG | + | chr6_2:63962419-63962438 | None:intergenic | 20.0% |
| !!! | TTGATGTTGAATTATTTTCT+GGG | - | chr6_2:63962457-63962476 | Msa0923480:intron | 20.0% |
| !!! | TGATGTTTTTGTTATTGAAT+TGG | - | chr6_2:63962779-63962798 | Msa0923480:intron | 20.0% |
| !! | AATCAAATTCAAAGAAAGTT+AGG | + | chr6_2:63963065-63963084 | None:intergenic | 20.0% |
| !!! | TATATGAGTGTATGTTTTAA+AGG | - | chr6_2:63963290-63963309 | Msa0923480:intron | 20.0% |
| !! | TAATTAAAGCAAGAAAAATG+GGG | + | chr6_2:63964014-63964033 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTCTAATATTACT+TGG | - | chr6_2:63964073-63964092 | Msa0923480:CDS | 20.0% |
| !! | TAGACATAATTATCATGATA+TGG | - | chr6_2:63964361-63964380 | Msa0923480:intron | 20.0% |
| !!! | TATAGCTTTTTCTCTTAATT+TGG | - | chr6_2:63964761-63964780 | Msa0923480:intron | 20.0% |
| !! | TAGTGATTTCATGATATATA+AGG | - | chr6_2:63964921-63964940 | Msa0923480:intron | 20.0% |
| !!! | ATATAAGGTTTTGATGTTTA+TGG | - | chr6_2:63964936-63964955 | Msa0923480:intron | 20.0% |
| !! | ATATGTAAGTAATTACTTGA+TGG | + | chr6_2:63965243-63965262 | None:intergenic | 20.0% |
| !!! | TGAGTTTTGAATTTTCAAAA+TGG | - | chr6_2:63965761-63965780 | Msa0923480:five_prime_UTR | 20.0% |
| !!! | GAGTTTTGAATTTTCAAAAT+GGG | - | chr6_2:63965762-63965781 | Msa0923480:five_prime_UTR | 20.0% |
| !!! | AGTTTTGAATTTTCAAAATG+GGG | - | chr6_2:63965763-63965782 | Msa0923480:five_prime_UTR | 20.0% |
| !!! | TTTGTTCAATGTTTGAAATT+TGG | - | chr6_2:63965895-63965914 | Msa0923480:five_prime_UTR | 20.0% |
| !!! | TCTTTGTTACTTCTAAATTA+TGG | - | chr6_2:63966024-63966043 | Msa0923480:intron | 20.0% |
| !!! | CTTTGTTACTTCTAAATTAT+GGG | - | chr6_2:63966025-63966044 | Msa0923480:intron | 20.0% |
| !!! | TCTTTTATATATGTTGTTAC+AGG | + | chr6_2:63966368-63966387 | None:intergenic | 20.0% |
| !!! | GAAATTTTATATCAGTTTGA+TGG | - | chr6_2:63966517-63966536 | Msa0923480:intron | 20.0% |
| !! | ATCTATATATCTATCTATCA+AGG | + | chr6_2:63967286-63967305 | None:intergenic | 20.0% |
| !! | TGTATTTACCATACAAAAAA+TGG | - | chr6_2:63967468-63967487 | Msa0923480:intron | 20.0% |
| !! | CAAAAGAAAAGAGATAAAAT+GGG | + | chr6_2:63967844-63967863 | None:intergenic | 20.0% |
| !! | TCAAAAGAAAAGAGATAAAA+TGG | + | chr6_2:63967845-63967864 | None:intergenic | 20.0% |
| !! | CTTGATGTTGAATTATTTTC+TGG | - | chr6_2:63962456-63962475 | Msa0923480:intron | 25.0% |
| ! | TGTTCATCACAACAAATATT+AGG | - | chr6_2:63962547-63962566 | Msa0923480:intron | 25.0% |
| !! | TAGGTTTGAAATAGAAATCT+TGG | - | chr6_2:63962566-63962585 | Msa0923480:intron | 25.0% |
| !! | AGGTTTGAAATAGAAATCTT+GGG | - | chr6_2:63962567-63962586 | Msa0923480:intron | 25.0% |
| ! | TATAAGATCAGTTACATATG+TGG | - | chr6_2:63962699-63962718 | Msa0923480:intron | 25.0% |
| !!! | ATTTGAGCATTCATTTTAAC+AGG | + | chr6_2:63962860-63962879 | None:intergenic | 25.0% |
| ! | TAAATTTCTAACTGGATCTA+AGG | + | chr6_2:63962934-63962953 | None:intergenic | 25.0% |
| ! | ACTACAAAGATTACTTATGA+TGG | + | chr6_2:63962962-63962981 | None:intergenic | 25.0% |
| ! | GTTAAGATTATGATGTTAAC+TGG | - | chr6_2:63963019-63963038 | Msa0923480:intron | 25.0% |
| !!! | TTTTGAGTTGTTTGTTTTAG+AGG | - | chr6_2:63963328-63963347 | Msa0923480:intron | 25.0% |
| !! | TAAAGAAGGAAGTATATACA+TGG | + | chr6_2:63963445-63963464 | None:intergenic | 25.0% |
| ! | ATTAAAAAACATGAAACCTG+AGG | + | chr6_2:63963495-63963514 | None:intergenic | 25.0% |
| !!! | TCAGGTTTCATGTTTTTTAA+TGG | - | chr6_2:63963494-63963513 | Msa0923480:CDS | 25.0% |
| !!! | TTTCATGTTTTTTAATGGCT+TGG | - | chr6_2:63963499-63963518 | Msa0923480:CDS | 25.0% |
| !!! | AATATTTTGGATAACGAAGA+TGG | + | chr6_2:63963808-63963827 | None:intergenic | 25.0% |
| !! | AACTCATTTGGACAATATTT+TGG | + | chr6_2:63963821-63963840 | None:intergenic | 25.0% |
| !! | TATCAATTACCTTTTCAGTT+TGG | - | chr6_2:63963857-63963876 | Msa0923480:intron | 25.0% |
| !! | TACATAGACTAACATTTTGT+AGG | + | chr6_2:63964153-63964172 | None:intergenic | 25.0% |
| !! | AACTGAATTTTGAATTCTCT+TGG | + | chr6_2:63964181-63964200 | None:intergenic | 25.0% |
| !!! | TTGATTTTATGTGTTTCTGA+AGG | - | chr6_2:63964216-63964235 | Msa0923480:intron | 25.0% |
| ! | TTAGGGTTGAAAAATATTGT+TGG | - | chr6_2:63964239-63964258 | Msa0923480:intron | 25.0% |
| !!! | TCCTATTTTTTTTTTGTGAC+AGG | - | chr6_2:63964275-63964294 | Msa0923480:intron | 25.0% |
| ! | TCCTGTCACAAAAAAAAAAT+AGG | + | chr6_2:63964279-63964298 | None:intergenic | 25.0% |
| !!! | TGTTTTTAGCTTCTATTCTT+TGG | - | chr6_2:63964427-63964446 | Msa0923480:intron | 25.0% |
| !!! | GTTTTTAGCTTCTATTCTTT+GGG | - | chr6_2:63964428-63964447 | Msa0923480:intron | 25.0% |
| ! | GATCTAATATTCAAATATGG+AGG | - | chr6_2:63964462-63964481 | Msa0923480:intron | 25.0% |
| ! | CAAATTATTGCAAATTGTCA+TGG | - | chr6_2:63964683-63964702 | Msa0923480:intron | 25.0% |
| !!! | TTTCGTACAAGATATTTTTG+TGG | - | chr6_2:63964726-63964745 | Msa0923480:intron | 25.0% |
| ! | TTTAAATTCTGGTCAATAGA+TGG | - | chr6_2:63965313-63965332 | Msa0923480:intron | 25.0% |
| ! | TGAAAATTCAAAACTCATCT+TGG | + | chr6_2:63965758-63965777 | None:intergenic | 25.0% |
| ! | ATTGTGGAATTTGATATGAA+GGG | - | chr6_2:63966285-63966304 | Msa0923480:intron | 25.0% |
| ! | AACTTGGTATATATCAGATA+TGG | - | chr6_2:63966337-63966356 | Msa0923480:intron | 25.0% |
| !!! | TTTGTAGTAGGTTATTTTGT+AGG | + | chr6_2:63966394-63966413 | None:intergenic | 25.0% |
| ! | GTGTAACTTATATTTGTAGT+AGG | + | chr6_2:63966406-63966425 | None:intergenic | 25.0% |
| ! | ATGAAATATAAGTTACCTTG+AGG | + | chr6_2:63966428-63966447 | None:intergenic | 25.0% |
| ! | GAAAAAATAAGGAACTGAAT+GGG | - | chr6_2:63967219-63967238 | Msa0923480:intron | 25.0% |
| !!! | AAACTTATGAGCCATTTTTT+GGG | + | chr6_2:63967333-63967352 | None:intergenic | 25.0% |
| !!! | AAAACTTATGAGCCATTTTT+TGG | + | chr6_2:63967334-63967353 | None:intergenic | 25.0% |
| ! | TGACAACTATTCAAAAAACA+TGG | - | chr6_2:63967417-63967436 | Msa0923480:intron | 25.0% |
| ! | TATTCAAAAAACATGGTCAA+AGG | - | chr6_2:63967424-63967443 | Msa0923480:intron | 25.0% |
| ! | TCTTAGAAAGATTTGGATTT+GGG | - | chr6_2:63967667-63967686 | Msa0923480:intron | 25.0% |
| ! | ACAACTTATATGAAATTACC+AGG | + | chr6_2:63967791-63967810 | None:intergenic | 25.0% |
| !! | TTGTGTTAATTTTGCAAAGT+TGG | - | chr6_2:63967875-63967894 | Msa0923480:intron | 25.0% |
| AACAAAACGGAACAACAAAT+CGG | + | chr6_2:63962313-63962332 | None:intergenic | 30.0% | |
| ! | GGTTTGAAATAGAAATCTTG+GGG | - | chr6_2:63962568-63962587 | Msa0923480:intron | 30.0% |
| !! | TTGATGTTGATTGCTTTTCT+GGG | - | chr6_2:63962601-63962620 | Msa0923480:intron | 30.0% |
| TTGTGGAAAACAAGTGTATT+TGG | - | chr6_2:63962657-63962676 | Msa0923480:intron | 30.0% | |
| TGTGGAAAACAAGTGTATTT+GGG | - | chr6_2:63962658-63962677 | Msa0923480:intron | 30.0% | |
| ACATATGTGGTAGTTAAAAG+TGG | - | chr6_2:63962712-63962731 | Msa0923480:intron | 30.0% | |
| TCTTTCATGATTGAAGCATA+TGG | + | chr6_2:63962907-63962926 | None:intergenic | 30.0% | |
| !! | TGGAGTTCTAAATTTCTAAC+TGG | + | chr6_2:63962942-63962961 | None:intergenic | 30.0% |
| GATTATGATGTTAACTGGAT+TGG | - | chr6_2:63963024-63963043 | Msa0923480:intron | 30.0% | |
| ATTGAGACAATTGAGTGAAA+GGG | + | chr6_2:63963238-63963257 | None:intergenic | 30.0% | |
| AATTGAGACAATTGAGTGAA+AGG | + | chr6_2:63963239-63963258 | None:intergenic | 30.0% | |
| ACAATTGAGACAATCACATA+TGG | + | chr6_2:63963270-63963289 | None:intergenic | 30.0% | |
| !!! | GAAATTTTGGAGCATAAAGA+AGG | + | chr6_2:63963459-63963478 | None:intergenic | 30.0% |
| TTCTGATAAAAAATAGCCTC+AGG | - | chr6_2:63963476-63963495 | Msa0923480:CDS | 30.0% | |
| AAGCAATCTAAATAACACTG+AGG | + | chr6_2:63963607-63963626 | None:intergenic | 30.0% | |
| AAATCATCTTGGCTTCAAAA+TGG | + | chr6_2:63963770-63963789 | None:intergenic | 30.0% | |
| CACTAAAATCCAAACTGAAA+AGG | + | chr6_2:63963869-63963888 | None:intergenic | 30.0% | |
| ! | TTCTATAAGTTTAGGACTTG+AGG | - | chr6_2:63963960-63963979 | Msa0923480:CDS | 30.0% |
| ! | TTTAGGACTTGAGGATATAT+AGG | - | chr6_2:63963969-63963988 | Msa0923480:CDS | 30.0% |
| TTTCTCTAATATTACTTGGC+AGG | - | chr6_2:63964077-63964096 | Msa0923480:CDS | 30.0% | |
| ! | TTTATGTGTTTCTGAAGGTT+AGG | - | chr6_2:63964221-63964240 | Msa0923480:intron | 30.0% |
| ! | TTATGTGTTTCTGAAGGTTA+GGG | - | chr6_2:63964222-63964241 | Msa0923480:intron | 30.0% |
| !!! | TTTTTTTTTGTGACAGGAGA+TGG | - | chr6_2:63964281-63964300 | Msa0923480:intron | 30.0% |
| GCATAAAGTTTCAACTTTGA+AGG | - | chr6_2:63964568-63964587 | Msa0923480:intron | 30.0% | |
| !! | CAAACCAATCAATTTTGAAG+AGG | + | chr6_2:63964631-63964650 | None:intergenic | 30.0% |
| ! | TAATTTGGTTCATTTGACTG+AGG | - | chr6_2:63964776-63964795 | Msa0923480:intron | 30.0% |
| AGTAGAAACACAATGTATTG+AGG | - | chr6_2:63964801-63964820 | Msa0923480:CDS | 30.0% | |
| AAACACAATGTATTGAGGTT+TGG | - | chr6_2:63964806-63964825 | Msa0923480:CDS | 30.0% | |
| GTTTATGGTTCAGAAATTGT+TGG | - | chr6_2:63964951-63964970 | Msa0923480:intron | 30.0% | |
| !! | AATTTGACCACTTGCTTTTA+TGG | - | chr6_2:63965098-63965117 | Msa0923480:intron | 30.0% |
| TCTTGAAATGAGATGTGAAA+TGG | - | chr6_2:63965345-63965364 | Msa0923480:intron | 30.0% | |
| AATTGTAATTCCTACCTTTG+AGG | - | chr6_2:63965487-63965506 | Msa0923480:five_prime_UTR | 30.0% | |
| ! | GATCTAGAACAAGTATGTAA+AGG | - | chr6_2:63965515-63965534 | Msa0923480:five_prime_UTR | 30.0% |
| GCAATGAATGAATGATGATA+AGG | + | chr6_2:63965683-63965702 | None:intergenic | 30.0% | |
| TTGGAAATTATGGAAGATAC+AGG | + | chr6_2:63965734-63965753 | None:intergenic | 30.0% | |
| ! | TCATCTTGGATTGGAAATTA+TGG | + | chr6_2:63965744-63965763 | None:intergenic | 30.0% |
| ATTCAAAACTCATCTTGGAT+TGG | + | chr6_2:63965753-63965772 | None:intergenic | 30.0% | |
| ! | TTCTGAAAACATTGAAACCA+TGG | + | chr6_2:63965932-63965951 | None:intergenic | 30.0% |
| !!! | TAGACCTTATTTTGATCCAT+TGG | - | chr6_2:63966214-63966233 | Msa0923480:intron | 30.0% |
| CAATCTCTGATACTTCAATA+GGG | + | chr6_2:63966269-63966288 | None:intergenic | 30.0% | |
| ACAATCTCTGATACTTCAAT+AGG | + | chr6_2:63966270-63966289 | None:intergenic | 30.0% | |
| ! | TATTGAAGTATCAGAGATTG+TGG | - | chr6_2:63966269-63966288 | Msa0923480:intron | 30.0% |
| GATTGTGGAATTTGATATGA+AGG | - | chr6_2:63966284-63966303 | Msa0923480:intron | 30.0% | |
| TTGGAAGAATGTCAAAAACT+TGG | - | chr6_2:63966321-63966340 | Msa0923480:intron | 30.0% | |
| CAAATATAAGTTACACCTCA+AGG | - | chr6_2:63966410-63966429 | Msa0923480:intron | 30.0% | |
| CGATAGACACTAATTATCAA+AGG | + | chr6_2:63966546-63966565 | None:intergenic | 30.0% | |
| GTTTATGTGTTTACGAATTG+AGG | - | chr6_2:63966575-63966594 | Msa0923480:intron | 30.0% | |
| AATGTTACACATATAAGGAG+AGG | + | chr6_2:63966678-63966697 | None:intergenic | 30.0% | |
| CTCCTTATATGTGTAACATT+CGG | - | chr6_2:63966678-63966697 | Msa0923480:intron | 30.0% | |
| TTCCGAATGTTACACATATA+AGG | + | chr6_2:63966683-63966702 | None:intergenic | 30.0% | |
| AATCACACTTGAAATAGTAC+AGG | + | chr6_2:63966729-63966748 | None:intergenic | 30.0% | |
| TGAAAAATCTCAATTTGTGC+AGG | - | chr6_2:63966811-63966830 | Msa0923480:intron | 30.0% | |
| ! | AAAAGCATAAGAGAGAGATT+GGG | - | chr6_2:63966849-63966868 | Msa0923480:intron | 30.0% |
| ATAAAATCATATGACCAGAG+GGG | + | chr6_2:63966950-63966969 | None:intergenic | 30.0% | |
| CATAAAATCATATGACCAGA+GGG | + | chr6_2:63966951-63966970 | None:intergenic | 30.0% | |
| ACATAAAATCATATGACCAG+AGG | + | chr6_2:63966952-63966971 | None:intergenic | 30.0% | |
| ACAGTTAAGCGGAAAAAATA+AGG | - | chr6_2:63967208-63967227 | Msa0923480:intron | 30.0% | |
| GGAAAAAATAAGGAACTGAA+TGG | - | chr6_2:63967218-63967237 | Msa0923480:intron | 30.0% | |
| !! | ATGGGTTTTTGTTTATGATC+AGG | - | chr6_2:63967237-63967256 | Msa0923480:intron | 30.0% |
| !! | TGGGTTTTTGTTTATGATCA+GGG | - | chr6_2:63967238-63967257 | Msa0923480:intron | 30.0% |
| AGAAACAAAAGCCCAAAAAA+TGG | - | chr6_2:63967319-63967338 | Msa0923480:intron | 30.0% | |
| CTTCTCTATAATGCATTTGT+AGG | - | chr6_2:63967370-63967389 | Msa0923480:intron | 30.0% | |
| GTTGTCATGATGTTAAATAG+TGG | + | chr6_2:63967404-63967423 | None:intergenic | 30.0% | |
| !!! | CTTATGAGCCATTTTTTGTA+TGG | + | chr6_2:63967479-63967498 | None:intergenic | 30.0% |
| CTTCTCTATAATGCATTTGT+AGG | - | chr6_2:63967370-63967389 | Msa0923480:intron | 30.0% | |
| ! | GATAAACGTCCAATGTATTT+TGG | + | chr6_2:63967607-63967626 | None:intergenic | 30.0% |
| !!! | CTGCTTTCATTTTAAAGCAT+TGG | + | chr6_2:63967645-63967664 | None:intergenic | 30.0% |
| GTCTTAGAAAGATTTGGATT+TGG | - | chr6_2:63967666-63967685 | Msa0923480:intron | 30.0% | |
| !! | GTACTTATGTTTTGTTGTAG+AGG | - | chr6_2:63967694-63967713 | Msa0923480:intron | 30.0% |
| ! | GTTAATTTTGCAAAGTTGGA+TGG | - | chr6_2:63967879-63967898 | Msa0923480:intron | 30.0% |
| ! | CCTTTGCATTTCTTTTATCA+TGG | + | chr6_2:63968057-63968076 | None:intergenic | 30.0% |
| CCATGATAAAAGAAATGCAA+AGG | - | chr6_2:63968054-63968073 | Msa0923480:intron | 30.0% | |
| TAAAAGAAATGCAAAGGAAG+AGG | - | chr6_2:63968060-63968079 | Msa0923480:intron | 30.0% | |
| AAATGGTACCAAACAAAAAG+CGG | + | chr6_2:63968206-63968225 | None:intergenic | 30.0% | |
| TATTGAAGGTCATGTGTAAA+TGG | + | chr6_2:63968223-63968242 | None:intergenic | 30.0% | |
| AGAGAAAGAGATGAAAGAGA+GGG | - | chr6_2:63962091-63962110 | Msa0923480:CDS | 35.0% | |
| AGGATAACTCTGATGCAAAT+CGG | + | chr6_2:63962194-63962213 | None:intergenic | 35.0% | |
| AGGGGAAAATAACAATGAAG+AGG | + | chr6_2:63962214-63962233 | None:intergenic | 35.0% | |
| CCTATTCCAATTACCAATAG+AGG | + | chr6_2:63962367-63962386 | None:intergenic | 35.0% | |
| ! | CCTCTATTGGTAATTGGAAT+AGG | - | chr6_2:63962364-63962383 | Msa0923480:intron | 35.0% |
| ! | AATCTAAAGTGATCCTCTTC+AGG | - | chr6_2:63962403-63962422 | Msa0923480:intron | 35.0% |
| ACTTGCATGCGATTTATGTT+TGG | - | chr6_2:63962497-63962516 | Msa0923480:intron | 35.0% | |
| CTTGCATGCGATTTATGTTT+GGG | - | chr6_2:63962498-63962517 | Msa0923480:intron | 35.0% | |
| TTGCATGCGATTTATGTTTG+GGG | - | chr6_2:63962499-63962518 | Msa0923480:intron | 35.0% | |
| !! | CTTGATGTTGATTGCTTTTC+TGG | - | chr6_2:63962600-63962619 | Msa0923480:intron | 35.0% |
| ! | CTTTTCTGGGTTATCAGTTT+TGG | - | chr6_2:63962614-63962633 | Msa0923480:intron | 35.0% |
| ! | TATCCTCAATGGTAATGATG+AGG | + | chr6_2:63963415-63963434 | None:intergenic | 35.0% |
| ! | GGAAGTATATACATGGCTTT+AGG | + | chr6_2:63963438-63963457 | None:intergenic | 35.0% |
| ATTAAAGATGGAGTTTCCAG+AGG | + | chr6_2:63963535-63963554 | None:intergenic | 35.0% | |
| ! | AGTCTACTCAAGTTGTTCAA+GGG | + | chr6_2:63963584-63963603 | None:intergenic | 35.0% |
| GAGATTCACAATGATGCTAA+TGG | + | chr6_2:63963696-63963715 | None:intergenic | 35.0% | |
| GTCAAAGAGCAAAATCATCT+TGG | + | chr6_2:63963781-63963800 | None:intergenic | 35.0% | |
| ! | ATTTTGGATAACGAAGATGG+TGG | + | chr6_2:63963805-63963824 | None:intergenic | 35.0% |
| CAGAGAGTTAGAAACTCATT+TGG | + | chr6_2:63963833-63963852 | None:intergenic | 35.0% | |
| CAAATGAGTTTCTAACTCTC+TGG | - | chr6_2:63963831-63963850 | Msa0923480:intron | 35.0% | |
| ! | GGATGTACTAAAAGCATAGT+GGG | - | chr6_2:63963931-63963950 | Msa0923480:intron | 35.0% |
| GGTTCTGCTTCTATAAGTTT+AGG | - | chr6_2:63963952-63963971 | Msa0923480:CDS | 35.0% | |
| ! | GCTTATAGAGTTGTTGATGA+AGG | - | chr6_2:63964099-63964118 | Msa0923480:CDS | 35.0% |
| ! | TAGAGTTGTTGATGAAGGTT+AGG | - | chr6_2:63964104-63964123 | Msa0923480:CDS | 35.0% |
| TTCCAATGCTCAATGTTGTT+TGG | - | chr6_2:63964599-63964618 | Msa0923480:intron | 35.0% | |
| AACCAAACAACATTGAGCAT+TGG | + | chr6_2:63964604-63964623 | None:intergenic | 35.0% | |
| !! | ACAAGATATTTTTGTGGCCT+TGG | - | chr6_2:63964732-63964751 | Msa0923480:intron | 35.0% |
| ! | ATGTATTGAGGTTTGGTTGA+TGG | - | chr6_2:63964813-63964832 | Msa0923480:CDS | 35.0% |
| ! | GTTGATGGATAATGTGACAA+AGG | - | chr6_2:63964828-63964847 | Msa0923480:intron | 35.0% |
| AAGGAGATGAGAAAGAAACT+AGG | - | chr6_2:63964847-63964866 | Msa0923480:intron | 35.0% | |
| ! | AGCAATTGATAGCAGAATTG+AGG | - | chr6_2:63965049-63965068 | Msa0923480:intron | 35.0% |
| AAAGCAAGTGGTCAAATTTC+TGG | + | chr6_2:63965096-63965115 | None:intergenic | 35.0% | |
| !! | ACCACTTGCTTTTATGGAAA+TGG | - | chr6_2:63965104-63965123 | Msa0923480:intron | 35.0% |
| ACCATTTCCATAAAAGCAAG+TGG | + | chr6_2:63965108-63965127 | None:intergenic | 35.0% | |
| AGCTGCAAAACAAAATTGTG+AGG | + | chr6_2:63965385-63965404 | None:intergenic | 35.0% | |
| ! | GCATTGTTGATCACATTTTC+TGG | - | chr6_2:63965451-63965470 | Msa0923480:five_prime_UTR | 35.0% |
| ! | TTGTTGATCACATTTTCTGG+TGG | - | chr6_2:63965454-63965473 | Msa0923480:five_prime_UTR | 35.0% |
| AGGTAGGAATTACAATTTCC+TGG | + | chr6_2:63965484-63965503 | None:intergenic | 35.0% | |
| !!! | ATTTGGTGTCTCTTTTTCCA+TGG | - | chr6_2:63965912-63965931 | Msa0923480:five_prime_UTR | 35.0% |
| ! | AAAGAGATTGATTCAGCTGA+TGG | + | chr6_2:63966009-63966028 | None:intergenic | 35.0% |
| !!! | GTATACGTGTTTGTTTTTGC+AGG | - | chr6_2:63966172-63966191 | Msa0923480:intron | 35.0% |
| TTGGCCAATGGATCAAAATA+AGG | + | chr6_2:63966221-63966240 | None:intergenic | 35.0% | |
| ACTTCACCTGGTTTAGTAAT+TGG | + | chr6_2:63966240-63966259 | None:intergenic | 35.0% | |
| ! | ATAGGGTATTTAACTTCACC+TGG | + | chr6_2:63966252-63966271 | None:intergenic | 35.0% |
| ! | AATTTGATATGAAGGGTGTG+TGG | - | chr6_2:63966292-63966311 | Msa0923480:intron | 35.0% |
| ! | GAAAAGCATAAGAGAGAGAT+TGG | - | chr6_2:63966848-63966867 | Msa0923480:intron | 35.0% |
| AAAGCATAAGAGAGAGATTG+GGG | - | chr6_2:63966850-63966869 | Msa0923480:intron | 35.0% | |
| TAAAATCATATGACCAGAGG+GGG | + | chr6_2:63966949-63966968 | None:intergenic | 35.0% | |
| ! | TATTTTCCTTTGTCGTGGAA+TGG | - | chr6_2:63967007-63967026 | Msa0923480:intron | 35.0% |
| ! | ATTTTCCTTTGTCGTGGAAT+GGG | - | chr6_2:63967008-63967027 | Msa0923480:intron | 35.0% |
| TGCATTAGAAACAGAAGTTG+AGG | - | chr6_2:63967057-63967076 | Msa0923480:intron | 35.0% | |
| GCAAAAACTCTTCACATTAC+TGG | - | chr6_2:63967086-63967105 | Msa0923480:intron | 35.0% | |
| CATGATGTTAAATAGTGGTG+TGG | + | chr6_2:63967399-63967418 | None:intergenic | 35.0% | |
| CTTGATGTTAAACAGTGATG+TGG | + | chr6_2:63967548-63967567 | None:intergenic | 35.0% | |
| AAACGTGTGCCAAAATACAT+TGG | - | chr6_2:63967595-63967614 | Msa0923480:intron | 35.0% | |
| TACATTGGACGTTTATCCAA+AGG | - | chr6_2:63967610-63967629 | Msa0923480:intron | 35.0% | |
| AGCAGAGTCTTAGAAAGATT+TGG | - | chr6_2:63967660-63967679 | Msa0923480:intron | 35.0% | |
| AATTTCTCTATCATGTGTCC+TGG | - | chr6_2:63967770-63967789 | Msa0923480:intron | 35.0% | |
| TCAAGACAAGAAACCCATAA+GGG | + | chr6_2:63967918-63967937 | None:intergenic | 35.0% | |
| TTCAAGACAAGAAACCCATA+AGG | + | chr6_2:63967919-63967938 | None:intergenic | 35.0% | |
| ACATCTTCCATCAAGTAACA+GGG | + | chr6_2:63967994-63968013 | None:intergenic | 35.0% | |
| TACATCTTCCATCAAGTAAC+AGG | + | chr6_2:63967995-63968014 | None:intergenic | 35.0% | |
| AAGAGCAATTCTTCAAGGAA+CGG | - | chr6_2:63968020-63968039 | Msa0923480:intron | 35.0% | |
| GAGAGAAAGAGATGAAAGAG+AGG | - | chr6_2:63962090-63962109 | Msa0923480:CDS | 40.0% | |
| GAGAAAGAGATGAAAGAGAG+GGG | - | chr6_2:63962092-63962111 | Msa0923480:CDS | 40.0% | |
| AGAAAGAGATGAAAGAGAGG+GGG | - | chr6_2:63962093-63962112 | Msa0923480:CDS | 40.0% | |
| AAGTCATGCATGTCCTCTAT+TGG | - | chr6_2:63962351-63962370 | Msa0923480:intron | 40.0% | |
| ! | GCATGTCCTCTATTGGTAAT+TGG | - | chr6_2:63962358-63962377 | Msa0923480:intron | 40.0% |
| !! | TTTGGTTCTGTTTGTGATGC+AGG | - | chr6_2:63962632-63962651 | Msa0923480:intron | 40.0% |
| !! | TTGGTTCTGTTTGTGATGCA+GGG | - | chr6_2:63962633-63962652 | Msa0923480:intron | 40.0% |
| TGACCTCATCATTACCATTG+AGG | - | chr6_2:63963409-63963428 | Msa0923480:CDS | 40.0% | |
| !! | ATGGCTTTAGGTATCCTCAA+TGG | + | chr6_2:63963426-63963445 | None:intergenic | 40.0% |
| ! | GAGTCTACTCAAGTTGTTCA+AGG | + | chr6_2:63963585-63963604 | None:intergenic | 40.0% |
| CTACTAATGTCGCGGAAATT+AGG | + | chr6_2:63963668-63963687 | None:intergenic | 40.0% | |
| TGAGTCCTTCTGATGTTACT+TGG | - | chr6_2:63963909-63963928 | Msa0923480:intron | 40.0% | |
| ! | GAGTCCTTCTGATGTTACTT+GGG | - | chr6_2:63963910-63963929 | Msa0923480:intron | 40.0% |
| ACATCCCAAGTAACATCAGA+AGG | + | chr6_2:63963917-63963936 | None:intergenic | 40.0% | |
| ! | GGGATGTACTAAAAGCATAG+TGG | - | chr6_2:63963930-63963949 | Msa0923480:intron | 40.0% |
| ! | GTTGATGAAGGTTAGGAATG+AGG | - | chr6_2:63964111-63964130 | Msa0923480:intron | 40.0% |
| GGAGTAGAGAAAGTTGAAGA+AGG | - | chr6_2:63964302-63964321 | Msa0923480:intron | 40.0% | |
| TGCGCCTCTTCAAAATTGAT+TGG | - | chr6_2:63964624-63964643 | Msa0923480:intron | 40.0% | |
| AAAAAGCTATATGTGCGCCA+AGG | + | chr6_2:63964752-63964771 | None:intergenic | 40.0% | |
| TCAGAAATTGTTGGATGCAG+TGG | - | chr6_2:63964960-63964979 | Msa0923480:intron | 40.0% | |
| ! | TGCAGTGGTTTGAAATAAGC+AGG | - | chr6_2:63964975-63964994 | Msa0923480:intron | 40.0% |
| ATTGGTTGAGATCTGACAGA+AGG | - | chr6_2:63965136-63965155 | Msa0923480:CDS | 40.0% | |
| TTGGTTGAGATCTGACAGAA+GGG | - | chr6_2:63965137-63965156 | Msa0923480:CDS | 40.0% | |
| CTGGTCAATAGATGGATGAT+TGG | - | chr6_2:63965321-63965340 | Msa0923480:intron | 40.0% | |
| TTCTAGATCAGATGCCTCAA+AGG | + | chr6_2:63965504-63965523 | None:intergenic | 40.0% | |
| GTTGCAACGGATATATGACA+AGG | + | chr6_2:63965618-63965637 | None:intergenic | 40.0% | |
| ! | ATTGATTCAGCTGATGGTGA+GGG | + | chr6_2:63966003-63966022 | None:intergenic | 40.0% |
| CTTAGAGATTTCTGCAGAGT+AGG | + | chr6_2:63966080-63966099 | None:intergenic | 40.0% | |
| CTACTCTGCAGAAATCTCTA+AGG | - | chr6_2:63966078-63966097 | Msa0923480:intron | 40.0% | |
| CTGGTTTAGTAATTGGCCAA+TGG | + | chr6_2:63966233-63966252 | None:intergenic | 40.0% | |
| CATTGGCCAATTACTAAACC+AGG | - | chr6_2:63966231-63966250 | Msa0923480:intron | 40.0% | |
| TTAGTGTCTATCGCTGAGTA+TGG | - | chr6_2:63966553-63966572 | Msa0923480:intron | 40.0% | |
| TTTCCACACTCAATGGTTGA+TGG | + | chr6_2:63966901-63966920 | None:intergenic | 40.0% | |
| ACCATTGAGTGTGGAAAAAG+AGG | - | chr6_2:63966904-63966923 | Msa0923480:intron | 40.0% | |
| ! | ACCTCTTTTTCCACACTCAA+TGG | + | chr6_2:63966908-63966927 | None:intergenic | 40.0% |
| ! | TCCTCTATTTTCCTTTGTCG+TGG | - | chr6_2:63967002-63967021 | Msa0923480:intron | 40.0% |
| TCCACGACAAAGGAAAATAG+AGG | + | chr6_2:63967006-63967025 | None:intergenic | 40.0% | |
| ! | TGTTTTCGCACACAGTTAAG+CGG | - | chr6_2:63967197-63967216 | Msa0923480:intron | 40.0% |
| GCATTGGAAAACAACACCTT+TGG | + | chr6_2:63967629-63967648 | None:intergenic | 40.0% | |
| CCATCAAGTAACAGGGAAAA+TGG | + | chr6_2:63967987-63968006 | None:intergenic | 40.0% | |
| !! | CCATTTTCCCTGTTACTTGA+TGG | - | chr6_2:63967984-63968003 | Msa0923480:intron | 40.0% |
| TGAGCAAGAGCAATTCTTCA+AGG | - | chr6_2:63968015-63968034 | Msa0923480:intron | 40.0% | |
| ! | CAAAGGAAGAGGATTTTGAG+AGG | - | chr6_2:63968071-63968090 | Msa0923480:intron | 40.0% |
| AAGGTGAAGAAGACAACTAC+TGG | - | chr6_2:63968115-63968134 | Msa0923480:five_prime_UTR | 40.0% | |
| AAAAGCGGTGAATTGGAGTT+TGG | + | chr6_2:63968191-63968210 | None:intergenic | 40.0% | |
| CCAAACAAAAAGCGGTGAAT+TGG | + | chr6_2:63968198-63968217 | None:intergenic | 40.0% | |
| !!! | CCAATTCACCGCTTTTTGTT+TGG | - | chr6_2:63968195-63968214 | Msa0923480:five_prime_UTR | 40.0% |
| AGAGGGACGAAAGAGAGAAA+GGG | - | chr6_2:63962128-63962147 | Msa0923480:CDS | 45.0% | |
| TGATGCAAATCGGTGCAGAT+CGG | + | chr6_2:63962184-63962203 | None:intergenic | 45.0% | |
| AGAAACGCGTACAGAACAGA+GGG | + | chr6_2:63962239-63962258 | None:intergenic | 45.0% | |
| ! | TGGTGAGTTGAAGGAGGAAA+GGG | + | chr6_2:63962262-63962281 | None:intergenic | 45.0% |
| ! | ACCGTCGTCTACCAATTTTC+CGG | - | chr6_2:63962281-63962300 | Msa0923480:CDS | 45.0% |
| TGTTTGTGATGCAGGGATTG+TGG | - | chr6_2:63962640-63962659 | Msa0923480:intron | 45.0% | |
| ! | GCTTGGTTGATTTCTTCCTC+TGG | - | chr6_2:63963516-63963535 | Msa0923480:CDS | 45.0% |
| !! | TGGTGTTGCTACTAATGTCG+CGG | + | chr6_2:63963676-63963695 | None:intergenic | 45.0% |
| AGCTTCTATTCTTTGGGTGC+AGG | - | chr6_2:63964434-63964453 | Msa0923480:intron | 45.0% | |
| TGGAAATGGTTGCTGCAGAT+TGG | - | chr6_2:63965118-63965137 | Msa0923480:intron | 45.0% | |
| GACAGAAGGGAAGATGATCT+TGG | - | chr6_2:63965150-63965169 | Msa0923480:CDS | 45.0% | |
| AGAAGGGAAGATGATCTTGG+TGG | - | chr6_2:63965153-63965172 | Msa0923480:CDS | 45.0% | |
| ! | AGCATTGTGCAGGTTGACTT+TGG | - | chr6_2:63965186-63965205 | Msa0923480:exon | 45.0% |
| !!! | GCAGGTTGACTTTGGTGTTT+TGG | - | chr6_2:63965194-63965213 | Msa0923480:exon | 45.0% |
| !! | ACATTTTCTGGTGGCTATCC+AGG | - | chr6_2:63965463-63965482 | Msa0923480:five_prime_UTR | 45.0% |
| AGATCAGATGCCTCAAAGGT+AGG | + | chr6_2:63965500-63965519 | None:intergenic | 45.0% | |
| CTGTGACTCGAAAGTTGCAA+CGG | + | chr6_2:63965631-63965650 | None:intergenic | 45.0% | |
| AGCTGCTTGCAATCTCTCTA+TGG | - | chr6_2:63965960-63965979 | Msa0923480:five_prime_UTR | 45.0% | |
| ! | GATTGATTCAGCTGATGGTG+AGG | + | chr6_2:63966004-63966023 | None:intergenic | 45.0% |
| TCAGGCAAGTGGCTAGAAAA+AGG | + | chr6_2:63966764-63966783 | None:intergenic | 45.0% | |
| GAAACAGAAGATCAGGCAAG+TGG | + | chr6_2:63966775-63966794 | None:intergenic | 45.0% | |
| ! | TTTTCAGACATCAGACGCAG+AGG | + | chr6_2:63966797-63966816 | None:intergenic | 45.0% |
| ACTCCATCAACCATTGAGTG+TGG | - | chr6_2:63966895-63966914 | Msa0923480:intron | 45.0% | |
| TCAAACCCATTCCACGACAA+AGG | + | chr6_2:63967016-63967035 | None:intergenic | 45.0% | |
| CCATCCACATTCTCCCTTAT+GGG | - | chr6_2:63967902-63967921 | Msa0923480:five_prime_UTR | 45.0% | |
| GAAACCCATAAGGGAGAATG+TGG | + | chr6_2:63967909-63967928 | None:intergenic | 45.0% | |
| TACTGGTCCCACTAATGCAA+AGG | - | chr6_2:63968132-63968151 | Msa0923480:five_prime_UTR | 45.0% | |
| CGTTCCTCCTTTGCATTAGT+GGG | + | chr6_2:63968142-63968161 | None:intergenic | 45.0% | |
| CCACTAATGCAAAGGAGGAA+CGG | - | chr6_2:63968140-63968159 | Msa0923480:five_prime_UTR | 45.0% | |
| GAGAGGGACGAAAGAGAGAA+AGG | - | chr6_2:63962127-63962146 | Msa0923480:CDS | 50.0% | |
| GAGAAACGCGTACAGAACAG+AGG | + | chr6_2:63962240-63962259 | None:intergenic | 50.0% | |
| ! | GTGGTGAGTTGAAGGAGGAA+AGG | + | chr6_2:63962263-63962282 | None:intergenic | 50.0% |
| GGAAAATTGGTAGACGACGG+TGG | + | chr6_2:63962282-63962301 | None:intergenic | 50.0% | |
| GCCGGAAAATTGGTAGACGA+CGG | + | chr6_2:63962285-63962304 | None:intergenic | 50.0% | |
| ! | TCGTCTACCAATTTTCCGGC+CGG | - | chr6_2:63962285-63962304 | Msa0923480:CDS | 50.0% |
| ACGGAACAACAAATCGGAGC+CGG | + | chr6_2:63962307-63962326 | None:intergenic | 50.0% | |
| TCAACCTGCACAATGCTCCT+AGG | + | chr6_2:63965183-63965202 | None:intergenic | 50.0% | |
| ! | CTTTCGAGTCACAGACACTC+TGG | - | chr6_2:63965637-63965656 | Msa0923480:five_prime_UTR | 50.0% |
| ! | GAAGGGTGTGTGGACATCAT+TGG | - | chr6_2:63966302-63966321 | Msa0923480:intron | 50.0% |
| CGCAGAGGAAACAGAAGATC+AGG | + | chr6_2:63966782-63966801 | None:intergenic | 50.0% | |
| ! | GTTGATGGAGTGATCCGACA+CGG | + | chr6_2:63966886-63966905 | None:intergenic | 50.0% |
| TATTGCTCTTTGTCCCCCTC+TGG | - | chr6_2:63966933-63966952 | Msa0923480:intron | 50.0% | |
| GCCATCCACATTCTCCCTTA+TGG | - | chr6_2:63967901-63967920 | Msa0923480:five_prime_UTR | 50.0% | |
| CCCATAAGGGAGAATGTGGA+TGG | + | chr6_2:63967905-63967924 | None:intergenic | 50.0% | |
| !! | GGATTTTGAGAGGATGCAGC+AGG | - | chr6_2:63968081-63968100 | Msa0923480:intron | 50.0% |
| TGGTCCCACTAATGCAAAGG+AGG | - | chr6_2:63968135-63968154 | Msa0923480:five_prime_UTR | 50.0% | |
| CCGTTCCTCCTTTGCATTAG+TGG | + | chr6_2:63968143-63968162 | None:intergenic | 50.0% | |
| GATGAAAGAGAGGGGGTCGA+CGG | - | chr6_2:63962100-63962119 | Msa0923480:CDS | 55.0% | |
| !! | GTGCAGATCGGAGTGTTGGA+CGG | + | chr6_2:63962172-63962191 | None:intergenic | 55.0% |
| ATCGGTGCAGATCGGAGTGT+TGG | + | chr6_2:63962176-63962195 | None:intergenic | 55.0% | |
| CGTACAGAACAGAGGGAGAG+GGG | + | chr6_2:63962232-63962251 | None:intergenic | 55.0% | |
| GCGTACAGAACAGAGGGAGA+GGG | + | chr6_2:63962233-63962252 | None:intergenic | 55.0% | |
| ! | AGACGACGGTGGTGAGTTGA+AGG | + | chr6_2:63962271-63962290 | None:intergenic | 55.0% |
| AACAACAAATCGGAGCCGGC+CGG | + | chr6_2:63962303-63962322 | None:intergenic | 55.0% | |
| ! | ATGATCTTGGTGGCCGTCCT+AGG | - | chr6_2:63965163-63965182 | Msa0923480:CDS | 55.0% |
| CCTGCACAATGCTCCTAGGA+CGG | + | chr6_2:63965179-63965198 | None:intergenic | 55.0% | |
| CGCGTACAGAACAGAGGGAG+AGG | + | chr6_2:63962234-63962253 | None:intergenic | 60.0% | |
| ! | CGACGGTGGTGAGTTGAAGG+AGG | + | chr6_2:63962268-63962287 | None:intergenic | 60.0% |
| ATCGGAGCCGGCCGGAAAAT+TGG | + | chr6_2:63962295-63962314 | None:intergenic | 60.0% | |
| !! | CCGTCCTAGGAGCATTGTGC+AGG | - | chr6_2:63965176-63965195 | Msa0923480:CDS | 60.0% |
| ! | GCAGCAGGAAGAGCGTGAGA+AGG | - | chr6_2:63968096-63968115 | Msa0923480:intron | 60.0% |
| AAGAGAGGGGGTCGACGGAG+AGG | - | chr6_2:63962105-63962124 | Msa0923480:CDS | 65.0% | |
| GTGTTGGACGGCGAGGTCGA+CGG | + | chr6_2:63962160-63962179 | None:intergenic | 65.0% | |
| !! | GATCGGAGTGTTGGACGGCG+AGG | + | chr6_2:63962167-63962186 | None:intergenic | 65.0% |
| GGGGAGCTACAGCTCCGTGT+CGG | - | chr6_2:63966869-63966888 | Msa0923480:intron | 65.0% | |
| AGGGGGTCGACGGAGAGGAG+AGG | - | chr6_2:63962110-63962129 | Msa0923480:CDS | 70.0% | |
| GGGGGTCGACGGAGAGGAGA+GGG | - | chr6_2:63962111-63962130 | Msa0923480:CDS | 70.0% | |
| TTGGACGGCGAGGTCGACGG+CGG | + | chr6_2:63962157-63962176 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 63962073 | 63968246 | 63962073 | ID=Msa0923480;Name=Msa0923480 |
| chr6_2 | mRNA | 63962073 | 63968246 | 63962073 | ID=Msa0923480-mRNA-1;Parent=Msa0923480;Name=Msa0923480-mRNA-1;_AED=0.39;_eAED=0.39;_QI=880|0.7|0.63|0.81|0.7|0.54|11|0|232 |
| chr6_2 | exon | 63962073 | 63962309 | 63962073 | ID=Msa0923480-mRNA-1:exon:9983;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63963394 | 63963547 | 63963394 | ID=Msa0923480-mRNA-1:exon:9982;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63963952 | 63964125 | 63963952 | ID=Msa0923480-mRNA-1:exon:9981;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63964220 | 63964230 | 63964220 | ID=Msa0923480-mRNA-1:exon:9980;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63964793 | 63964834 | 63964793 | ID=Msa0923480-mRNA-1:exon:9979;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63965122 | 63965222 | 63965122 | ID=Msa0923480-mRNA-1:exon:9978;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63965428 | 63966022 | 63965428 | ID=Msa0923480-mRNA-1:exon:9977;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63966187 | 63966220 | 63966187 | ID=Msa0923480-mRNA-1:exon:9976;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63967640 | 63967665 | 63967640 | ID=Msa0923480-mRNA-1:exon:9975;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63967895 | 63967965 | 63967895 | ID=Msa0923480-mRNA-1:exon:9974;Parent=Msa0923480-mRNA-1 |
| chr6_2 | exon | 63968113 | 63968246 | 63968113 | ID=Msa0923480-mRNA-1:exon:9973;Parent=Msa0923480-mRNA-1 |
| chr6_2 | five_prime_UTR | 63968113 | 63968246 | 63968113 | ID=Msa0923480-mRNA-1:five_prime_utr;Parent=Msa0923480-mRNA-1 |
| chr6_2 | five_prime_UTR | 63967895 | 63967965 | 63967895 | ID=Msa0923480-mRNA-1:five_prime_utr;Parent=Msa0923480-mRNA-1 |
| chr6_2 | five_prime_UTR | 63967640 | 63967665 | 63967640 | ID=Msa0923480-mRNA-1:five_prime_utr;Parent=Msa0923480-mRNA-1 |
| chr6_2 | five_prime_UTR | 63966187 | 63966220 | 63966187 | ID=Msa0923480-mRNA-1:five_prime_utr;Parent=Msa0923480-mRNA-1 |
| chr6_2 | five_prime_UTR | 63965428 | 63966022 | 63965428 | ID=Msa0923480-mRNA-1:five_prime_utr;Parent=Msa0923480-mRNA-1 |
| chr6_2 | five_prime_UTR | 63965203 | 63965222 | 63965203 | ID=Msa0923480-mRNA-1:five_prime_utr;Parent=Msa0923480-mRNA-1 |
| chr6_2 | CDS | 63965122 | 63965202 | 63965122 | ID=Msa0923480-mRNA-1:cds;Parent=Msa0923480-mRNA-1 |
| chr6_2 | CDS | 63964793 | 63964834 | 63964793 | ID=Msa0923480-mRNA-1:cds;Parent=Msa0923480-mRNA-1 |
| chr6_2 | CDS | 63964220 | 63964230 | 63964220 | ID=Msa0923480-mRNA-1:cds;Parent=Msa0923480-mRNA-1 |
| chr6_2 | CDS | 63963952 | 63964125 | 63963952 | ID=Msa0923480-mRNA-1:cds;Parent=Msa0923480-mRNA-1 |
| chr6_2 | CDS | 63963394 | 63963547 | 63963394 | ID=Msa0923480-mRNA-1:cds;Parent=Msa0923480-mRNA-1 |
| chr6_2 | CDS | 63962073 | 63962309 | 63962073 | ID=Msa0923480-mRNA-1:cds;Parent=Msa0923480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
