Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313960 | XP_027190237.1 | 78.571 | 70 | 8 | 2 | 28 | 96 | 97 | 160 | 1.08e-25 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313960 | sp|P26690|6DCS_SOYBN | 63.158 | 57 | 20 | 1 | 41 | 96 | 104 | 160 | 4.69e-18 | 84.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313960 | A0A3Q7YB43 | 78.571 | 70 | 8 | 2 | 28 | 96 | 97 | 160 | 5.13e-26 | 112 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0131770 | Msa0313960 | 0.820420 | 6.923051e-53 | -8.615850e-47 |
| Msa0194440 | Msa0313960 | 0.822719 | 2.037874e-53 | -8.615850e-47 |
| Msa0313960 | Msa0340470 | 0.817562 | 3.091618e-52 | -8.615850e-47 |
| Msa0313960 | Msa0342750 | 0.828334 | 9.522263e-55 | -8.615850e-47 |
| Msa0313960 | Msa0375630 | 0.821934 | 3.100386e-53 | -8.615850e-47 |
| Msa0313960 | Msa0475600 | 0.827013 | 1.977363e-54 | -8.615850e-47 |
| Msa0313960 | Msa0493000 | 0.807880 | 4.071179e-50 | -8.615850e-47 |
| Msa0313960 | Msa0534230 | 0.913888 | 3.647815e-84 | -8.615850e-47 |
| Msa0313960 | Msa0594560 | 0.805775 | 1.134532e-49 | -8.615850e-47 |
| Msa0313960 | Msa0602390 | 0.800594 | 1.339437e-48 | -8.615850e-47 |
| Msa0313960 | Msa0610800 | 0.816954 | 4.237131e-52 | -8.615850e-47 |
| Msa0313960 | Msa0649110 | 0.801684 | 8.018468e-49 | -8.615850e-47 |
| Msa0313960 | Msa0663810 | 0.811381 | 7.204566e-51 | -8.615850e-47 |
| Msa0313960 | Msa0748970 | 0.814656 | 1.378663e-51 | -8.615850e-47 |
| Msa0313960 | Msa0768290 | 0.822320 | 2.523542e-53 | -8.615850e-47 |
| Msa0313960 | Msa0768370 | 0.813278 | 2.775286e-51 | -8.615850e-47 |
| Msa0313960 | Msa0899450 | 0.801130 | 1.041067e-48 | -8.615850e-47 |
| Msa0313960 | Msa0901070 | 0.828387 | 9.246219e-55 | -8.615850e-47 |
| Msa0313960 | Msa0923480 | 0.915709 | 4.264244e-85 | -8.615850e-47 |
| Msa0313960 | Msa0924050 | 0.811329 | 7.391558e-51 | -8.615850e-47 |
| Msa0313960 | Msa0925290 | 0.836653 | 8.249559e-57 | -8.615850e-47 |
| Msa0313960 | Msa0927290 | 0.819625 | 1.052935e-52 | -8.615850e-47 |
| Msa0313960 | Msa0927380 | 0.818508 | 1.889728e-52 | -8.615850e-47 |
| Msa0313960 | Msa0964900 | 0.803265 | 3.786676e-49 | -8.615850e-47 |
| Msa0313960 | Msa0966750 | 0.808282 | 3.342907e-50 | -8.615850e-47 |
| Msa0313960 | Msa0976670 | 0.809901 | 1.504799e-50 | -8.615850e-47 |
| Msa0313960 | Msa0986280 | 0.871212 | 8.115009e-67 | -8.615850e-47 |
| Msa0313960 | Msa0997500 | 0.805432 | 1.338738e-49 | -8.615850e-47 |
| Msa0313960 | Msa0999120 | 0.801549 | 8.545652e-49 | -8.615850e-47 |
| Msa0313960 | Msa1069220 | 0.805061 | 1.600883e-49 | -8.615850e-47 |
| Msa0313960 | Msa1121480 | 0.800639 | 1.311537e-48 | -8.615850e-47 |
| Msa0313960 | Msa1226990 | 0.894762 | 1.817673e-75 | -8.615850e-47 |
| Msa0313960 | Msa1284680 | 0.801472 | 8.859728e-49 | -8.615850e-47 |
| Msa0313960 | Msa1388510 | 0.805131 | 1.547988e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313960 | MtrunA17_Chr3g0121001 | 76.389 | 72 | 10 | 2 | 28 | 98 | 98 | 163 | 4.45e-29 | 110 |
| Msa0313960 | MtrunA17_Chr3g0131301 | 86.275 | 51 | 7 | 0 | 151 | 201 | 591 | 641 | 3.59e-21 | 91.3 |
| Msa0313960 | MtrunA17_Chr1g0173621 | 64.912 | 57 | 19 | 1 | 41 | 96 | 105 | 161 | 3.81e-17 | 78.2 |
| Msa0313960 | MtrunA17_Chr3g0131291 | 78.723 | 47 | 10 | 0 | 151 | 197 | 517 | 563 | 1.08e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313960 | AT1G59960.1 | 47.368 | 57 | 29 | 1 | 41 | 96 | 106 | 162 | 5.96e-13 | 67.0 |
Find 51 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCAAGTGGTCAAATTTC+TGG | 0.189388 | 2_4:-9475313 | None:intergenic |
| ACTTCACCTGGTTTAGTAAT+TGG | 0.192844 | 2_4:-9476458 | None:intergenic |
| GTTGCAGGAGCTGGTGTGGC+AGG | 0.289751 | 2_4:+9479225 | Msa0313960:intron |
| GAAAAGCATAAGAGAGAGAT+TGG | 0.315271 | 2_4:+9477069 | Msa0313960:CDS |
| ACAATCTCTGATACTTCAAT+AGG | 0.347637 | 2_4:-9476488 | None:intergenic |
| TTTCCACACTCAATGGTTGA+TGG | 0.380251 | 2_4:-9477119 | None:intergenic |
| CGCAGAGGAAACAGAAGATC+AGG | 0.387361 | 2_4:-9477000 | None:intergenic |
| AACTTGGTATATATCAGATA+TGG | 0.395439 | 2_4:+9476558 | Msa0313960:CDS |
| TTGGCCAATGGATCAAAATA+AGG | 0.425035 | 2_4:-9476439 | None:intergenic |
| CTACTCTGCAGAAATCTCTA+AGG | 0.431594 | 2_4:+9476299 | Msa0313960:intron |
| TTGCAGGAGCTGGTGTGGCA+GGG | 0.432662 | 2_4:+9479226 | Msa0313960:intron |
| AAAAGCATAAGAGAGAGATT+GGG | 0.443286 | 2_4:+9477070 | Msa0313960:CDS |
| TGCAGGAGCTGGTGTGGCAG+GGG | 0.444125 | 2_4:+9479227 | Msa0313960:intron |
| CAATCTCTGATACTTCAATA+GGG | 0.455333 | 2_4:-9476487 | None:intergenic |
| TGCAGTGGTTTGAAATAAGC+AGG | 0.458333 | 2_4:+9475195 | Msa0313960:five_prime_UTR |
| ATGATCTTGGTGGCCGTCCT+AGG | 0.459779 | 2_4:+9475383 | Msa0313960:CDS |
| AATTGTAATTCCTACCTTTG+AGG | 0.471415 | 2_4:+9475708 | Msa0313960:CDS |
| AGCAATTGATAGCAGAATTG+AGG | 0.479084 | 2_4:+9475269 | Msa0313960:five_prime_UTR |
| GATTGTGGAATTTGATATGA+AGG | 0.479491 | 2_4:+9476505 | Msa0313960:CDS |
| TGAGCAAGAGCAATTCTTCA+AGG | 0.502577 | 2_4:+9478236 | Msa0313960:CDS |
| GACAGAAGGGAAGATGATCT+TGG | 0.506460 | 2_4:+9475370 | Msa0313960:CDS |
| CCGTCCTAGGAGCATTGTGC+AGG | 0.514421 | 2_4:+9475396 | Msa0313960:CDS |
| TGGAAATGGTTGCTGCAGAT+TGG | 0.522261 | 2_4:+9475338 | Msa0313960:CDS |
| GAAGGGTGTGTGGACATCAT+TGG | 0.524351 | 2_4:+9476523 | Msa0313960:CDS |
| TCAACCTGCACAATGCTCCT+AGG | 0.532591 | 2_4:-9475400 | None:intergenic |
| TAAAAGAAATGCAAAGGAAG+AGG | 0.532671 | 2_4:+9478281 | Msa0313960:CDS |
| TGCTGTTGCAGGAGCTGGTG+TGG | 0.535178 | 2_4:+9479221 | Msa0313960:intron |
| ATAGGGTATTTAACTTCACC+TGG | 0.535676 | 2_4:-9476470 | None:intergenic |
| GGGGCTTTAGGTGCTGCAGC+AGG | 0.539473 | 2_4:+9479261 | Msa0313960:CDS |
| TTCTAGATCAGATGCCTCAA+AGG | 0.539627 | 2_4:-9475722 | None:intergenic |
| TCAGAAATTGTTGGATGCAG+TGG | 0.545844 | 2_4:+9475180 | None:intergenic |
| AAGGTGAAGAAGACAACTAC+TGG | 0.547743 | 2_4:+9478336 | Msa0313960:CDS |
| TATTGAAGTATCAGAGATTG+TGG | 0.554195 | 2_4:+9476490 | Msa0313960:CDS |
| CATTGGCCAATTACTAAACC+AGG | 0.561140 | 2_4:+9476452 | Msa0313960:CDS |
| CTGGTTTAGTAATTGGCCAA+TGG | 0.564395 | 2_4:-9476451 | None:intergenic |
| ATTGGTTGAGATCTGACAGA+AGG | 0.589843 | 2_4:+9475356 | Msa0313960:CDS |
| GCAGCAGGAAGAGCGTGAGA+AGG | 0.590681 | 2_4:+9478317 | Msa0313960:CDS |
| AGATCAGATGCCTCAAAGGT+AGG | 0.602073 | 2_4:-9475718 | None:intergenic |
| ACCATTTCCATAAAAGCAAG+TGG | 0.602451 | 2_4:-9475325 | None:intergenic |
| TTGGTTGAGATCTGACAGAA+GGG | 0.602460 | 2_4:+9475357 | Msa0313960:CDS |
| AAGAGCAATTCTTCAAGGAA+CGG | 0.610038 | 2_4:+9478241 | Msa0313960:CDS |
| CCATGATAAAAGAAATGCAA+AGG | 0.612516 | 2_4:+9478275 | Msa0313960:CDS |
| AAAGCATAAGAGAGAGATTG+GGG | 0.614356 | 2_4:+9477071 | Msa0313960:CDS |
| GAAACAGAAGATCAGGCAAG+TGG | 0.636731 | 2_4:-9476993 | None:intergenic |
| ACTCCATCAACCATTGAGTG+TGG | 0.639001 | 2_4:+9477116 | Msa0313960:CDS |
| GGGGAGCTACAGCTCCGTGT+CGG | 0.653257 | 2_4:+9477090 | Msa0313960:CDS |
| CCTGCACAATGCTCCTAGGA+CGG | 0.659595 | 2_4:-9475396 | None:intergenic |
| ATTGTGGAATTTGATATGAA+GGG | 0.667822 | 2_4:+9476506 | Msa0313960:CDS |
| AGAAGGGAAGATGATCTTGG+TGG | 0.671197 | 2_4:+9475373 | Msa0313960:CDS |
| AATTTGATATGAAGGGTGTG+TGG | 0.685210 | 2_4:+9476513 | Msa0313960:CDS |
| GTTGATGGAGTGATCCGACA+CGG | 0.688205 | 2_4:-9477104 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAGTATTTTTCTTTAAA+CGG | + | chr2_4:9476712-9476731 | Msa0313960:intron | 10.0% |
| !!! | TAATAGTATTTTTCTTTAAA+CGG | + | chr2_4:9476712-9476731 | Msa0313960:intron | 10.0% |
| !!! | AATGTCTCATTTTTTTAAAA+TGG | + | chr2_4:9475233-9475252 | Msa0313960:five_prime_UTR | 15.0% |
| !! | TTTGATTAAATGTTAAATTC+TGG | + | chr2_4:9475523-9475542 | Msa0313960:intron | 15.0% |
| !! | TCAAAATATTTGAGTAAAAA+TGG | + | chr2_4:9475779-9475798 | Msa0313960:intron | 15.0% |
| !! | AAGAAAAATACTATTATGAT+TGG | - | chr2_4:9476708-9476727 | None:intergenic | 15.0% |
| !! | GATTTATAATAAACACAAAT+TGG | - | chr2_4:9477963-9477982 | None:intergenic | 15.0% |
| !! | AAAACGATAATAATAATCTT+TGG | - | chr2_4:9478614-9478633 | None:intergenic | 15.0% |
| !!! | AATGTCTCATTTTTTTAAAA+TGG | + | chr2_4:9475233-9475252 | Msa0313960:five_prime_UTR | 15.0% |
| !! | TTTGATTAAATGTTAAATTC+TGG | + | chr2_4:9475523-9475542 | Msa0313960:intron | 15.0% |
| !! | TCAAAATATTTGAGTAAAAA+TGG | + | chr2_4:9475779-9475798 | Msa0313960:intron | 15.0% |
| !! | AAGAAAAATACTATTATGAT+TGG | - | chr2_4:9476708-9476727 | None:intergenic | 15.0% |
| !! | GATTTATAATAAACACAAAT+TGG | - | chr2_4:9477963-9477982 | None:intergenic | 15.0% |
| !! | AAAACGATAATAATAATCTT+TGG | - | chr2_4:9478614-9478633 | None:intergenic | 15.0% |
| !! | ATATGTAAGTAATTACTTGA+TGG | - | chr2_4:9475463-9475482 | None:intergenic | 20.0% |
| !!! | TGAGTTTTGAATTTTCAAAA+TGG | + | chr2_4:9475982-9476001 | Msa0313960:intron | 20.0% |
| !!! | GAGTTTTGAATTTTCAAAAT+GGG | + | chr2_4:9475983-9476002 | Msa0313960:intron | 20.0% |
| !!! | AGTTTTGAATTTTCAAAATG+GGG | + | chr2_4:9475984-9476003 | Msa0313960:intron | 20.0% |
| !!! | TTTGTTCAATGTTTGAAATT+TGG | + | chr2_4:9476116-9476135 | Msa0313960:intron | 20.0% |
| !!! | TCTTTGTTACTTCTAAATTA+TGG | + | chr2_4:9476245-9476264 | Msa0313960:intron | 20.0% |
| !!! | CTTTGTTACTTCTAAATTAT+GGG | + | chr2_4:9476246-9476265 | Msa0313960:intron | 20.0% |
| !!! | TCTTTTATATATGTTGTTAC+AGG | - | chr2_4:9476589-9476608 | None:intergenic | 20.0% |
| !!! | GAAATTTTATATCAGTTTGA+TGG | + | chr2_4:9476738-9476757 | Msa0313960:intron | 20.0% |
| !! | ATCTATATATCTATCTATCA+AGG | - | chr2_4:9477507-9477526 | None:intergenic | 20.0% |
| !! | TGTATTTACCATACAAAAAA+TGG | + | chr2_4:9477689-9477708 | Msa0313960:intron | 20.0% |
| !! | CAAAAGAAAAGAGATAAAAT+GGG | - | chr2_4:9478065-9478084 | None:intergenic | 20.0% |
| !! | TCAAAAGAAAAGAGATAAAA+TGG | - | chr2_4:9478066-9478085 | None:intergenic | 20.0% |
| !! | ACGATTAAAAATCACTAAAT+AGG | - | chr2_4:9478544-9478563 | None:intergenic | 20.0% |
| !! | ACTATTAGTAGAGAAAAATA+AGG | + | chr2_4:9479085-9479104 | Msa0313960:intron | 20.0% |
| !! | ATATGTAAGTAATTACTTGA+TGG | - | chr2_4:9475463-9475482 | None:intergenic | 20.0% |
| !!! | TGAGTTTTGAATTTTCAAAA+TGG | + | chr2_4:9475982-9476001 | Msa0313960:intron | 20.0% |
| !!! | GAGTTTTGAATTTTCAAAAT+GGG | + | chr2_4:9475983-9476002 | Msa0313960:intron | 20.0% |
| !!! | AGTTTTGAATTTTCAAAATG+GGG | + | chr2_4:9475984-9476003 | Msa0313960:intron | 20.0% |
| !!! | TTTGTTCAATGTTTGAAATT+TGG | + | chr2_4:9476116-9476135 | Msa0313960:intron | 20.0% |
| !!! | TCTTTGTTACTTCTAAATTA+TGG | + | chr2_4:9476245-9476264 | Msa0313960:intron | 20.0% |
| !!! | CTTTGTTACTTCTAAATTAT+GGG | + | chr2_4:9476246-9476265 | Msa0313960:intron | 20.0% |
| !!! | TCTTTTATATATGTTGTTAC+AGG | - | chr2_4:9476589-9476608 | None:intergenic | 20.0% |
| !!! | GAAATTTTATATCAGTTTGA+TGG | + | chr2_4:9476738-9476757 | Msa0313960:intron | 20.0% |
| !! | ATCTATATATCTATCTATCA+AGG | - | chr2_4:9477507-9477526 | None:intergenic | 20.0% |
| !! | TGTATTTACCATACAAAAAA+TGG | + | chr2_4:9477689-9477708 | Msa0313960:intron | 20.0% |
| !! | CAAAAGAAAAGAGATAAAAT+GGG | - | chr2_4:9478065-9478084 | None:intergenic | 20.0% |
| !! | TCAAAAGAAAAGAGATAAAA+TGG | - | chr2_4:9478066-9478085 | None:intergenic | 20.0% |
| !! | ACGATTAAAAATCACTAAAT+AGG | - | chr2_4:9478544-9478563 | None:intergenic | 20.0% |
| !! | ACTATTAGTAGAGAAAAATA+AGG | + | chr2_4:9479085-9479104 | Msa0313960:intron | 20.0% |
| ! | TGAAAATTCAAAACTCATCT+TGG | - | chr2_4:9475979-9475998 | None:intergenic | 25.0% |
| ! | ATTGTGGAATTTGATATGAA+GGG | + | chr2_4:9476506-9476525 | Msa0313960:CDS | 25.0% |
| ! | AACTTGGTATATATCAGATA+TGG | + | chr2_4:9476558-9476577 | Msa0313960:CDS | 25.0% |
| !!! | TTTGTAGTAGGTTATTTTGT+AGG | - | chr2_4:9476615-9476634 | None:intergenic | 25.0% |
| ! | GTGTAACTTATATTTGTAGT+AGG | - | chr2_4:9476627-9476646 | None:intergenic | 25.0% |
| ! | ATGAAATATAAGTTACCTTG+AGG | - | chr2_4:9476649-9476668 | None:intergenic | 25.0% |
| ! | GAAAAAATAAGGAACTGAAT+GGG | + | chr2_4:9477440-9477459 | Msa0313960:intron | 25.0% |
| !!! | AAACTTATGAGCCATTTTTT+GGG | - | chr2_4:9477554-9477573 | None:intergenic | 25.0% |
| !!! | AAAACTTATGAGCCATTTTT+TGG | - | chr2_4:9477555-9477574 | None:intergenic | 25.0% |
| ! | TGACAACTATTCAAAAAACA+TGG | + | chr2_4:9477638-9477657 | Msa0313960:intron | 25.0% |
| ! | TATTCAAAAAACATGGTCAA+AGG | + | chr2_4:9477645-9477664 | Msa0313960:intron | 25.0% |
| ! | TCTTAGAAAGATTTGGATTT+GGG | + | chr2_4:9477888-9477907 | Msa0313960:intron | 25.0% |
| ! | ACAACTTATATGAAATTACC+AGG | - | chr2_4:9478012-9478031 | None:intergenic | 25.0% |
| !! | TTGTGTTAATTTTGCAAAGT+TGG | + | chr2_4:9478096-9478115 | Msa0313960:intron | 25.0% |
| ! | AGAATCATACCTAATATTGA+AGG | - | chr2_4:9478458-9478477 | None:intergenic | 25.0% |
| ! | TATGCTGTTATCATCTATAT+TGG | + | chr2_4:9478707-9478726 | Msa0313960:intron | 25.0% |
| !!! | CTATTTTTTGCATTCCAATA+TGG | + | chr2_4:9478770-9478789 | Msa0313960:intron | 25.0% |
| !!! | GAGTATTTTTTTGTTCCTTT+GGG | + | chr2_4:9478847-9478866 | Msa0313960:intron | 25.0% |
| !!! | AGTATTTTTTTGTTCCTTTG+GGG | + | chr2_4:9478848-9478867 | Msa0313960:intron | 25.0% |
| !!! | TTCTGGTTTTTATGTTGTAT+TGG | + | chr2_4:9478901-9478920 | Msa0313960:intron | 25.0% |
| ! | TGTGTTATCTTCATAAGTTT+GGG | + | chr2_4:9478992-9479011 | Msa0313960:intron | 25.0% |
| ! | TGAAAATTCAAAACTCATCT+TGG | - | chr2_4:9475979-9475998 | None:intergenic | 25.0% |
| ! | ATTGTGGAATTTGATATGAA+GGG | + | chr2_4:9476506-9476525 | Msa0313960:CDS | 25.0% |
| ! | AACTTGGTATATATCAGATA+TGG | + | chr2_4:9476558-9476577 | Msa0313960:CDS | 25.0% |
| !!! | TTTGTAGTAGGTTATTTTGT+AGG | - | chr2_4:9476615-9476634 | None:intergenic | 25.0% |
| ! | GTGTAACTTATATTTGTAGT+AGG | - | chr2_4:9476627-9476646 | None:intergenic | 25.0% |
| ! | ATGAAATATAAGTTACCTTG+AGG | - | chr2_4:9476649-9476668 | None:intergenic | 25.0% |
| ! | GAAAAAATAAGGAACTGAAT+GGG | + | chr2_4:9477440-9477459 | Msa0313960:intron | 25.0% |
| !!! | AAACTTATGAGCCATTTTTT+GGG | - | chr2_4:9477554-9477573 | None:intergenic | 25.0% |
| !!! | AAAACTTATGAGCCATTTTT+TGG | - | chr2_4:9477555-9477574 | None:intergenic | 25.0% |
| ! | TGACAACTATTCAAAAAACA+TGG | + | chr2_4:9477638-9477657 | Msa0313960:intron | 25.0% |
| ! | TATTCAAAAAACATGGTCAA+AGG | + | chr2_4:9477645-9477664 | Msa0313960:intron | 25.0% |
| ! | TCTTAGAAAGATTTGGATTT+GGG | + | chr2_4:9477888-9477907 | Msa0313960:intron | 25.0% |
| ! | ACAACTTATATGAAATTACC+AGG | - | chr2_4:9478012-9478031 | None:intergenic | 25.0% |
| !! | TTGTGTTAATTTTGCAAAGT+TGG | + | chr2_4:9478096-9478115 | Msa0313960:intron | 25.0% |
| ! | AGAATCATACCTAATATTGA+AGG | - | chr2_4:9478458-9478477 | None:intergenic | 25.0% |
| ! | TATGCTGTTATCATCTATAT+TGG | + | chr2_4:9478707-9478726 | Msa0313960:intron | 25.0% |
| !!! | CTATTTTTTGCATTCCAATA+TGG | + | chr2_4:9478770-9478789 | Msa0313960:intron | 25.0% |
| !!! | GAGTATTTTTTTGTTCCTTT+GGG | + | chr2_4:9478847-9478866 | Msa0313960:intron | 25.0% |
| !!! | AGTATTTTTTTGTTCCTTTG+GGG | + | chr2_4:9478848-9478867 | Msa0313960:intron | 25.0% |
| !!! | TTCTGGTTTTTATGTTGTAT+TGG | + | chr2_4:9478901-9478920 | Msa0313960:intron | 25.0% |
| ! | TGTGTTATCTTCATAAGTTT+GGG | + | chr2_4:9478992-9479011 | Msa0313960:intron | 25.0% |
| !! | AATTTGACCACTTGCTTTTA+TGG | + | chr2_4:9475318-9475337 | Msa0313960:exon | 30.0% |
| GTTAAATTCTGGTCAATAGA+TGG | + | chr2_4:9475534-9475553 | Msa0313960:intron | 30.0% | |
| TCTTGAAATGAGATGTGAAA+TGG | + | chr2_4:9475566-9475585 | Msa0313960:intron | 30.0% | |
| AATTGTAATTCCTACCTTTG+AGG | + | chr2_4:9475708-9475727 | Msa0313960:CDS | 30.0% | |
| ! | GATCTAGAACAAGTATGTAA+AGG | + | chr2_4:9475736-9475755 | Msa0313960:intron | 30.0% |
| GCAATGAATGAATGATGATA+AGG | - | chr2_4:9475904-9475923 | None:intergenic | 30.0% | |
| TTGGAAATTATGGAAGATAC+AGG | - | chr2_4:9475955-9475974 | None:intergenic | 30.0% | |
| ! | TCATCTTGGATTGGAAATTA+TGG | - | chr2_4:9475965-9475984 | None:intergenic | 30.0% |
| ATTCAAAACTCATCTTGGAT+TGG | - | chr2_4:9475974-9475993 | None:intergenic | 30.0% | |
| ! | TTCTGAAAACATTGAAACCA+TGG | - | chr2_4:9476153-9476172 | None:intergenic | 30.0% |
| !!! | TAGACCTTATTTTGATCCAT+TGG | + | chr2_4:9476435-9476454 | Msa0313960:CDS | 30.0% |
| CAATCTCTGATACTTCAATA+GGG | - | chr2_4:9476490-9476509 | None:intergenic | 30.0% | |
| ACAATCTCTGATACTTCAAT+AGG | - | chr2_4:9476491-9476510 | None:intergenic | 30.0% | |
| ! | TATTGAAGTATCAGAGATTG+TGG | + | chr2_4:9476490-9476509 | Msa0313960:CDS | 30.0% |
| GATTGTGGAATTTGATATGA+AGG | + | chr2_4:9476505-9476524 | Msa0313960:CDS | 30.0% | |
| TTGGAAGAATGTCAAAAACT+TGG | + | chr2_4:9476542-9476561 | Msa0313960:CDS | 30.0% | |
| CAAATATAAGTTACACCTCA+AGG | + | chr2_4:9476631-9476650 | Msa0313960:intron | 30.0% | |
| CGATAGACACTAATTATCAA+AGG | - | chr2_4:9476767-9476786 | None:intergenic | 30.0% | |
| GTTTATGTGTTTACGAATTG+AGG | + | chr2_4:9476796-9476815 | Msa0313960:intron | 30.0% | |
| AATGTTACACATATAAGGAG+AGG | - | chr2_4:9476899-9476918 | None:intergenic | 30.0% | |
| CTCCTTATATGTGTAACATT+CGG | + | chr2_4:9476899-9476918 | Msa0313960:intron | 30.0% | |
| TTCCGAATGTTACACATATA+AGG | - | chr2_4:9476904-9476923 | None:intergenic | 30.0% | |
| AATCACACTTGAAATAGTAC+AGG | - | chr2_4:9476950-9476969 | None:intergenic | 30.0% | |
| TGAAAAATCTCAATTTGTGC+AGG | + | chr2_4:9477032-9477051 | Msa0313960:CDS | 30.0% | |
| ! | AAAAGCATAAGAGAGAGATT+GGG | + | chr2_4:9477070-9477089 | Msa0313960:CDS | 30.0% |
| ATAAAATCATATGACCAGAG+GGG | - | chr2_4:9477171-9477190 | None:intergenic | 30.0% | |
| CATAAAATCATATGACCAGA+GGG | - | chr2_4:9477172-9477191 | None:intergenic | 30.0% | |
| ACATAAAATCATATGACCAG+AGG | - | chr2_4:9477173-9477192 | None:intergenic | 30.0% | |
| ACAGTTAAGCGGAAAAAATA+AGG | + | chr2_4:9477429-9477448 | Msa0313960:intron | 30.0% | |
| GGAAAAAATAAGGAACTGAA+TGG | + | chr2_4:9477439-9477458 | Msa0313960:intron | 30.0% | |
| !! | ATGGGTTTTTGTTTATGATC+AGG | + | chr2_4:9477458-9477477 | Msa0313960:intron | 30.0% |
| !! | TGGGTTTTTGTTTATGATCA+GGG | + | chr2_4:9477459-9477478 | Msa0313960:intron | 30.0% |
| AGAAACAAAAGCCCAAAAAA+TGG | + | chr2_4:9477540-9477559 | Msa0313960:intron | 30.0% | |
| CTTCTCTATAATGCATTTGT+AGG | + | chr2_4:9477591-9477610 | Msa0313960:intron | 30.0% | |
| GTTGTCATGATGTTAAATAG+TGG | - | chr2_4:9477625-9477644 | None:intergenic | 30.0% | |
| !!! | CTTATGAGCCATTTTTTGTA+TGG | - | chr2_4:9477700-9477719 | None:intergenic | 30.0% |
| CTTCTCTATAATGCATTTGT+AGG | + | chr2_4:9477591-9477610 | Msa0313960:intron | 30.0% | |
| ! | GATAAACGTCCAATGTATTT+TGG | - | chr2_4:9477828-9477847 | None:intergenic | 30.0% |
| !!! | CTGCTTTCATTTTAAAGCAT+TGG | - | chr2_4:9477866-9477885 | None:intergenic | 30.0% |
| GTCTTAGAAAGATTTGGATT+TGG | + | chr2_4:9477887-9477906 | Msa0313960:intron | 30.0% | |
| !! | GTACTTATGTTTTGTTGTAG+AGG | + | chr2_4:9477915-9477934 | Msa0313960:intron | 30.0% |
| ! | GTTAATTTTGCAAAGTTGGA+TGG | + | chr2_4:9478100-9478119 | Msa0313960:intron | 30.0% |
| ! | CCTTTGCATTTCTTTTATCA+TGG | - | chr2_4:9478278-9478297 | None:intergenic | 30.0% |
| CCATGATAAAAGAAATGCAA+AGG | + | chr2_4:9478275-9478294 | Msa0313960:CDS | 30.0% | |
| TAAAAGAAATGCAAAGGAAG+AGG | + | chr2_4:9478281-9478300 | Msa0313960:CDS | 30.0% | |
| AAATGGTACCAAACAAAAAG+CGG | - | chr2_4:9478427-9478446 | None:intergenic | 30.0% | |
| TATTGAAGGTCATGTGTAAA+TGG | - | chr2_4:9478444-9478463 | None:intergenic | 30.0% | |
| TACACATGACCTTCAATATT+AGG | + | chr2_4:9478446-9478465 | Msa0313960:intron | 30.0% | |
| !!! | ATCTATATTGGTTTTCCTTC+TGG | + | chr2_4:9478719-9478738 | Msa0313960:intron | 30.0% |
| ! | TCTAGATTTTGTGTTAGTCA+AGG | + | chr2_4:9478747-9478766 | Msa0313960:intron | 30.0% |
| ATTCCAATATGGTTCGTAAT+TGG | + | chr2_4:9478781-9478800 | Msa0313960:intron | 30.0% | |
| ATACCAATTACGAACCATAT+TGG | - | chr2_4:9478787-9478806 | None:intergenic | 30.0% | |
| ! | ATATTCTTTTGCGACTGTTA+TGG | + | chr2_4:9478825-9478844 | Msa0313960:intron | 30.0% |
| !!! | GGAGTATTTTTTTGTTCCTT+TGG | + | chr2_4:9478846-9478865 | Msa0313960:intron | 30.0% |
| !!! | TGTTTTTTTCCTGTCATTTC+TGG | + | chr2_4:9478884-9478903 | Msa0313960:intron | 30.0% |
| ACATAAAAACCAGAAATGAC+AGG | - | chr2_4:9478896-9478915 | None:intergenic | 30.0% | |
| GTGTGTTATCTTCATAAGTT+TGG | + | chr2_4:9478991-9479010 | Msa0313960:intron | 30.0% | |
| !! | AATTTGACCACTTGCTTTTA+TGG | + | chr2_4:9475318-9475337 | Msa0313960:exon | 30.0% |
| GTTAAATTCTGGTCAATAGA+TGG | + | chr2_4:9475534-9475553 | Msa0313960:intron | 30.0% | |
| TCTTGAAATGAGATGTGAAA+TGG | + | chr2_4:9475566-9475585 | Msa0313960:intron | 30.0% | |
| AATTGTAATTCCTACCTTTG+AGG | + | chr2_4:9475708-9475727 | Msa0313960:CDS | 30.0% | |
| ! | GATCTAGAACAAGTATGTAA+AGG | + | chr2_4:9475736-9475755 | Msa0313960:intron | 30.0% |
| GCAATGAATGAATGATGATA+AGG | - | chr2_4:9475904-9475923 | None:intergenic | 30.0% | |
| TTGGAAATTATGGAAGATAC+AGG | - | chr2_4:9475955-9475974 | None:intergenic | 30.0% | |
| ! | TCATCTTGGATTGGAAATTA+TGG | - | chr2_4:9475965-9475984 | None:intergenic | 30.0% |
| ATTCAAAACTCATCTTGGAT+TGG | - | chr2_4:9475974-9475993 | None:intergenic | 30.0% | |
| ! | TTCTGAAAACATTGAAACCA+TGG | - | chr2_4:9476153-9476172 | None:intergenic | 30.0% |
| !!! | TAGACCTTATTTTGATCCAT+TGG | + | chr2_4:9476435-9476454 | Msa0313960:CDS | 30.0% |
| CAATCTCTGATACTTCAATA+GGG | - | chr2_4:9476490-9476509 | None:intergenic | 30.0% | |
| ACAATCTCTGATACTTCAAT+AGG | - | chr2_4:9476491-9476510 | None:intergenic | 30.0% | |
| ! | TATTGAAGTATCAGAGATTG+TGG | + | chr2_4:9476490-9476509 | Msa0313960:CDS | 30.0% |
| GATTGTGGAATTTGATATGA+AGG | + | chr2_4:9476505-9476524 | Msa0313960:CDS | 30.0% | |
| TTGGAAGAATGTCAAAAACT+TGG | + | chr2_4:9476542-9476561 | Msa0313960:CDS | 30.0% | |
| CAAATATAAGTTACACCTCA+AGG | + | chr2_4:9476631-9476650 | Msa0313960:intron | 30.0% | |
| CGATAGACACTAATTATCAA+AGG | - | chr2_4:9476767-9476786 | None:intergenic | 30.0% | |
| GTTTATGTGTTTACGAATTG+AGG | + | chr2_4:9476796-9476815 | Msa0313960:intron | 30.0% | |
| AATGTTACACATATAAGGAG+AGG | - | chr2_4:9476899-9476918 | None:intergenic | 30.0% | |
| CTCCTTATATGTGTAACATT+CGG | + | chr2_4:9476899-9476918 | Msa0313960:intron | 30.0% | |
| TTCCGAATGTTACACATATA+AGG | - | chr2_4:9476904-9476923 | None:intergenic | 30.0% | |
| AATCACACTTGAAATAGTAC+AGG | - | chr2_4:9476950-9476969 | None:intergenic | 30.0% | |
| TGAAAAATCTCAATTTGTGC+AGG | + | chr2_4:9477032-9477051 | Msa0313960:CDS | 30.0% | |
| ! | AAAAGCATAAGAGAGAGATT+GGG | + | chr2_4:9477070-9477089 | Msa0313960:CDS | 30.0% |
| ATAAAATCATATGACCAGAG+GGG | - | chr2_4:9477171-9477190 | None:intergenic | 30.0% | |
| CATAAAATCATATGACCAGA+GGG | - | chr2_4:9477172-9477191 | None:intergenic | 30.0% | |
| ACATAAAATCATATGACCAG+AGG | - | chr2_4:9477173-9477192 | None:intergenic | 30.0% | |
| ACAGTTAAGCGGAAAAAATA+AGG | + | chr2_4:9477429-9477448 | Msa0313960:intron | 30.0% | |
| GGAAAAAATAAGGAACTGAA+TGG | + | chr2_4:9477439-9477458 | Msa0313960:intron | 30.0% | |
| !! | ATGGGTTTTTGTTTATGATC+AGG | + | chr2_4:9477458-9477477 | Msa0313960:intron | 30.0% |
| !! | TGGGTTTTTGTTTATGATCA+GGG | + | chr2_4:9477459-9477478 | Msa0313960:intron | 30.0% |
| AGAAACAAAAGCCCAAAAAA+TGG | + | chr2_4:9477540-9477559 | Msa0313960:intron | 30.0% | |
| CTTCTCTATAATGCATTTGT+AGG | + | chr2_4:9477591-9477610 | Msa0313960:intron | 30.0% | |
| GTTGTCATGATGTTAAATAG+TGG | - | chr2_4:9477625-9477644 | None:intergenic | 30.0% | |
| !!! | CTTATGAGCCATTTTTTGTA+TGG | - | chr2_4:9477700-9477719 | None:intergenic | 30.0% |
| CTTCTCTATAATGCATTTGT+AGG | + | chr2_4:9477591-9477610 | Msa0313960:intron | 30.0% | |
| ! | GATAAACGTCCAATGTATTT+TGG | - | chr2_4:9477828-9477847 | None:intergenic | 30.0% |
| !!! | CTGCTTTCATTTTAAAGCAT+TGG | - | chr2_4:9477866-9477885 | None:intergenic | 30.0% |
| GTCTTAGAAAGATTTGGATT+TGG | + | chr2_4:9477887-9477906 | Msa0313960:intron | 30.0% | |
| !! | GTACTTATGTTTTGTTGTAG+AGG | + | chr2_4:9477915-9477934 | Msa0313960:intron | 30.0% |
| ! | GTTAATTTTGCAAAGTTGGA+TGG | + | chr2_4:9478100-9478119 | Msa0313960:intron | 30.0% |
| ! | CCTTTGCATTTCTTTTATCA+TGG | - | chr2_4:9478278-9478297 | None:intergenic | 30.0% |
| CCATGATAAAAGAAATGCAA+AGG | + | chr2_4:9478275-9478294 | Msa0313960:CDS | 30.0% | |
| TAAAAGAAATGCAAAGGAAG+AGG | + | chr2_4:9478281-9478300 | Msa0313960:CDS | 30.0% | |
| AAATGGTACCAAACAAAAAG+CGG | - | chr2_4:9478427-9478446 | None:intergenic | 30.0% | |
| TATTGAAGGTCATGTGTAAA+TGG | - | chr2_4:9478444-9478463 | None:intergenic | 30.0% | |
| TACACATGACCTTCAATATT+AGG | + | chr2_4:9478446-9478465 | Msa0313960:intron | 30.0% | |
| !!! | ATCTATATTGGTTTTCCTTC+TGG | + | chr2_4:9478719-9478738 | Msa0313960:intron | 30.0% |
| ! | TCTAGATTTTGTGTTAGTCA+AGG | + | chr2_4:9478747-9478766 | Msa0313960:intron | 30.0% |
| ATTCCAATATGGTTCGTAAT+TGG | + | chr2_4:9478781-9478800 | Msa0313960:intron | 30.0% | |
| ATACCAATTACGAACCATAT+TGG | - | chr2_4:9478787-9478806 | None:intergenic | 30.0% | |
| ! | ATATTCTTTTGCGACTGTTA+TGG | + | chr2_4:9478825-9478844 | Msa0313960:intron | 30.0% |
| !!! | GGAGTATTTTTTTGTTCCTT+TGG | + | chr2_4:9478846-9478865 | Msa0313960:intron | 30.0% |
| !!! | TGTTTTTTTCCTGTCATTTC+TGG | + | chr2_4:9478884-9478903 | Msa0313960:intron | 30.0% |
| ACATAAAAACCAGAAATGAC+AGG | - | chr2_4:9478896-9478915 | None:intergenic | 30.0% | |
| GTGTGTTATCTTCATAAGTT+TGG | + | chr2_4:9478991-9479010 | Msa0313960:intron | 30.0% | |
| ! | AGCAATTGATAGCAGAATTG+AGG | + | chr2_4:9475269-9475288 | Msa0313960:five_prime_UTR | 35.0% |
| AAAGCAAGTGGTCAAATTTC+TGG | - | chr2_4:9475316-9475335 | None:intergenic | 35.0% | |
| !! | ACCACTTGCTTTTATGGAAA+TGG | + | chr2_4:9475324-9475343 | Msa0313960:exon | 35.0% |
| ACCATTTCCATAAAAGCAAG+TGG | - | chr2_4:9475328-9475347 | None:intergenic | 35.0% | |
| AGCTGCAAAACAAAATTGTG+AGG | - | chr2_4:9475606-9475625 | None:intergenic | 35.0% | |
| AGGTAGGAATTACAATTTCC+TGG | - | chr2_4:9475705-9475724 | None:intergenic | 35.0% | |
| !!! | ATTTGGTGTCTCTTTTTCCA+TGG | + | chr2_4:9476133-9476152 | Msa0313960:intron | 35.0% |
| ! | AAAGAGATTGATTCAGCTGA+TGG | - | chr2_4:9476230-9476249 | None:intergenic | 35.0% |
| !!! | GTATACGTGTTTGTTTTTGC+AGG | + | chr2_4:9476393-9476412 | Msa0313960:intron | 35.0% |
| TTGGCCAATGGATCAAAATA+AGG | - | chr2_4:9476442-9476461 | None:intergenic | 35.0% | |
| ACTTCACCTGGTTTAGTAAT+TGG | - | chr2_4:9476461-9476480 | None:intergenic | 35.0% | |
| ! | ATAGGGTATTTAACTTCACC+TGG | - | chr2_4:9476473-9476492 | None:intergenic | 35.0% |
| ! | AATTTGATATGAAGGGTGTG+TGG | + | chr2_4:9476513-9476532 | Msa0313960:CDS | 35.0% |
| ! | GAAAAGCATAAGAGAGAGAT+TGG | + | chr2_4:9477069-9477088 | Msa0313960:CDS | 35.0% |
| AAAGCATAAGAGAGAGATTG+GGG | + | chr2_4:9477071-9477090 | Msa0313960:CDS | 35.0% | |
| TAAAATCATATGACCAGAGG+GGG | - | chr2_4:9477170-9477189 | None:intergenic | 35.0% | |
| ! | TATTTTCCTTTGTCGTGGAA+TGG | + | chr2_4:9477228-9477247 | Msa0313960:intron | 35.0% |
| ! | ATTTTCCTTTGTCGTGGAAT+GGG | + | chr2_4:9477229-9477248 | Msa0313960:intron | 35.0% |
| TGCATTAGAAACAGAAGTTG+AGG | + | chr2_4:9477278-9477297 | Msa0313960:intron | 35.0% | |
| GCAAAAACTCTTCACATTAC+TGG | + | chr2_4:9477307-9477326 | Msa0313960:intron | 35.0% | |
| CATGATGTTAAATAGTGGTG+TGG | - | chr2_4:9477620-9477639 | None:intergenic | 35.0% | |
| CTTGATGTTAAACAGTGATG+TGG | - | chr2_4:9477769-9477788 | None:intergenic | 35.0% | |
| AAACGTGTGCCAAAATACAT+TGG | + | chr2_4:9477816-9477835 | Msa0313960:intron | 35.0% | |
| TACATTGGACGTTTATCCAA+AGG | + | chr2_4:9477831-9477850 | Msa0313960:intron | 35.0% | |
| AGCAGAGTCTTAGAAAGATT+TGG | + | chr2_4:9477881-9477900 | Msa0313960:intron | 35.0% | |
| AATTTCTCTATCATGTGTCC+TGG | + | chr2_4:9477991-9478010 | Msa0313960:intron | 35.0% | |
| TCAAGACAAGAAACCCATAA+GGG | - | chr2_4:9478139-9478158 | None:intergenic | 35.0% | |
| TTCAAGACAAGAAACCCATA+AGG | - | chr2_4:9478140-9478159 | None:intergenic | 35.0% | |
| ACATCTTCCATCAAGTAACA+GGG | - | chr2_4:9478215-9478234 | None:intergenic | 35.0% | |
| TACATCTTCCATCAAGTAAC+AGG | - | chr2_4:9478216-9478235 | None:intergenic | 35.0% | |
| AAGAGCAATTCTTCAAGGAA+CGG | + | chr2_4:9478241-9478260 | Msa0313960:CDS | 35.0% | |
| !!! | TATTGGTTTTCCTTCTGGTA+TGG | + | chr2_4:9478724-9478743 | Msa0313960:intron | 35.0% |
| AAAATCTAGACCATACCAGA+AGG | - | chr2_4:9478737-9478756 | None:intergenic | 35.0% | |
| TGGACACAGTTATTATGTTG+TGG | + | chr2_4:9478921-9478940 | Msa0313960:intron | 35.0% | |
| ATTTGCATCGAAACGATGAA+TGG | - | chr2_4:9479043-9479062 | None:intergenic | 35.0% | |
| !! | CTATGCTTAAATTTTGGTGG+AGG | - | chr2_4:9479134-9479153 | None:intergenic | 35.0% |
| ! | GGACTATGCTTAAATTTTGG+TGG | - | chr2_4:9479137-9479156 | None:intergenic | 35.0% |
| ! | GGAGGACTATGCTTAAATTT+TGG | - | chr2_4:9479140-9479159 | None:intergenic | 35.0% |
| TTCATGTTCAACATCAAAGG+AGG | - | chr2_4:9479158-9479177 | None:intergenic | 35.0% | |
| CAGTTCATGTTCAACATCAA+AGG | - | chr2_4:9479161-9479180 | None:intergenic | 35.0% | |
| TTGATGTTGAACATGAACTG+AGG | + | chr2_4:9479161-9479180 | Msa0313960:intron | 35.0% | |
| TGATGTTGAACATGAACTGA+GGG | + | chr2_4:9479162-9479181 | Msa0313960:intron | 35.0% | |
| ! | AGCAATTGATAGCAGAATTG+AGG | + | chr2_4:9475269-9475288 | Msa0313960:five_prime_UTR | 35.0% |
| AAAGCAAGTGGTCAAATTTC+TGG | - | chr2_4:9475316-9475335 | None:intergenic | 35.0% | |
| !! | ACCACTTGCTTTTATGGAAA+TGG | + | chr2_4:9475324-9475343 | Msa0313960:exon | 35.0% |
| ACCATTTCCATAAAAGCAAG+TGG | - | chr2_4:9475328-9475347 | None:intergenic | 35.0% | |
| AGCTGCAAAACAAAATTGTG+AGG | - | chr2_4:9475606-9475625 | None:intergenic | 35.0% | |
| AGGTAGGAATTACAATTTCC+TGG | - | chr2_4:9475705-9475724 | None:intergenic | 35.0% | |
| !!! | ATTTGGTGTCTCTTTTTCCA+TGG | + | chr2_4:9476133-9476152 | Msa0313960:intron | 35.0% |
| ! | AAAGAGATTGATTCAGCTGA+TGG | - | chr2_4:9476230-9476249 | None:intergenic | 35.0% |
| !!! | GTATACGTGTTTGTTTTTGC+AGG | + | chr2_4:9476393-9476412 | Msa0313960:intron | 35.0% |
| TTGGCCAATGGATCAAAATA+AGG | - | chr2_4:9476442-9476461 | None:intergenic | 35.0% | |
| ACTTCACCTGGTTTAGTAAT+TGG | - | chr2_4:9476461-9476480 | None:intergenic | 35.0% | |
| ! | ATAGGGTATTTAACTTCACC+TGG | - | chr2_4:9476473-9476492 | None:intergenic | 35.0% |
| ! | AATTTGATATGAAGGGTGTG+TGG | + | chr2_4:9476513-9476532 | Msa0313960:CDS | 35.0% |
| ! | GAAAAGCATAAGAGAGAGAT+TGG | + | chr2_4:9477069-9477088 | Msa0313960:CDS | 35.0% |
| AAAGCATAAGAGAGAGATTG+GGG | + | chr2_4:9477071-9477090 | Msa0313960:CDS | 35.0% | |
| TAAAATCATATGACCAGAGG+GGG | - | chr2_4:9477170-9477189 | None:intergenic | 35.0% | |
| ! | TATTTTCCTTTGTCGTGGAA+TGG | + | chr2_4:9477228-9477247 | Msa0313960:intron | 35.0% |
| ! | ATTTTCCTTTGTCGTGGAAT+GGG | + | chr2_4:9477229-9477248 | Msa0313960:intron | 35.0% |
| TGCATTAGAAACAGAAGTTG+AGG | + | chr2_4:9477278-9477297 | Msa0313960:intron | 35.0% | |
| GCAAAAACTCTTCACATTAC+TGG | + | chr2_4:9477307-9477326 | Msa0313960:intron | 35.0% | |
| CATGATGTTAAATAGTGGTG+TGG | - | chr2_4:9477620-9477639 | None:intergenic | 35.0% | |
| CTTGATGTTAAACAGTGATG+TGG | - | chr2_4:9477769-9477788 | None:intergenic | 35.0% | |
| AAACGTGTGCCAAAATACAT+TGG | + | chr2_4:9477816-9477835 | Msa0313960:intron | 35.0% | |
| TACATTGGACGTTTATCCAA+AGG | + | chr2_4:9477831-9477850 | Msa0313960:intron | 35.0% | |
| AGCAGAGTCTTAGAAAGATT+TGG | + | chr2_4:9477881-9477900 | Msa0313960:intron | 35.0% | |
| AATTTCTCTATCATGTGTCC+TGG | + | chr2_4:9477991-9478010 | Msa0313960:intron | 35.0% | |
| TCAAGACAAGAAACCCATAA+GGG | - | chr2_4:9478139-9478158 | None:intergenic | 35.0% | |
| TTCAAGACAAGAAACCCATA+AGG | - | chr2_4:9478140-9478159 | None:intergenic | 35.0% | |
| ACATCTTCCATCAAGTAACA+GGG | - | chr2_4:9478215-9478234 | None:intergenic | 35.0% | |
| TACATCTTCCATCAAGTAAC+AGG | - | chr2_4:9478216-9478235 | None:intergenic | 35.0% | |
| AAGAGCAATTCTTCAAGGAA+CGG | + | chr2_4:9478241-9478260 | Msa0313960:CDS | 35.0% | |
| !!! | TATTGGTTTTCCTTCTGGTA+TGG | + | chr2_4:9478724-9478743 | Msa0313960:intron | 35.0% |
| AAAATCTAGACCATACCAGA+AGG | - | chr2_4:9478737-9478756 | None:intergenic | 35.0% | |
| TGGACACAGTTATTATGTTG+TGG | + | chr2_4:9478921-9478940 | Msa0313960:intron | 35.0% | |
| ATTTGCATCGAAACGATGAA+TGG | - | chr2_4:9479043-9479062 | None:intergenic | 35.0% | |
| !! | CTATGCTTAAATTTTGGTGG+AGG | - | chr2_4:9479134-9479153 | None:intergenic | 35.0% |
| ! | GGACTATGCTTAAATTTTGG+TGG | - | chr2_4:9479137-9479156 | None:intergenic | 35.0% |
| ! | GGAGGACTATGCTTAAATTT+TGG | - | chr2_4:9479140-9479159 | None:intergenic | 35.0% |
| TTCATGTTCAACATCAAAGG+AGG | - | chr2_4:9479158-9479177 | None:intergenic | 35.0% | |
| CAGTTCATGTTCAACATCAA+AGG | - | chr2_4:9479161-9479180 | None:intergenic | 35.0% | |
| TTGATGTTGAACATGAACTG+AGG | + | chr2_4:9479161-9479180 | Msa0313960:intron | 35.0% | |
| TGATGTTGAACATGAACTGA+GGG | + | chr2_4:9479162-9479181 | Msa0313960:intron | 35.0% | |
| ! | TGCAGTGGTTTGAAATAAGC+AGG | + | chr2_4:9475195-9475214 | Msa0313960:five_prime_UTR | 40.0% |
| ATTGGTTGAGATCTGACAGA+AGG | + | chr2_4:9475356-9475375 | Msa0313960:CDS | 40.0% | |
| TTGGTTGAGATCTGACAGAA+GGG | + | chr2_4:9475357-9475376 | Msa0313960:CDS | 40.0% | |
| CTGGTCAATAGATGGATGAT+TGG | + | chr2_4:9475542-9475561 | Msa0313960:intron | 40.0% | |
| GCATTGTTGATCACACTTTC+TGG | + | chr2_4:9475672-9475691 | Msa0313960:intron | 40.0% | |
| TTGTTGATCACACTTTCTGG+TGG | + | chr2_4:9475675-9475694 | Msa0313960:intron | 40.0% | |
| TTCTAGATCAGATGCCTCAA+AGG | - | chr2_4:9475725-9475744 | None:intergenic | 40.0% | |
| GTTGCAACGGATATATGACA+AGG | - | chr2_4:9475839-9475858 | None:intergenic | 40.0% | |
| ! | ATTGATTCAGCTGATGGTGA+GGG | - | chr2_4:9476224-9476243 | None:intergenic | 40.0% |
| CTTAGAGATTTCTGCAGAGT+AGG | - | chr2_4:9476301-9476320 | None:intergenic | 40.0% | |
| CTACTCTGCAGAAATCTCTA+AGG | + | chr2_4:9476299-9476318 | Msa0313960:intron | 40.0% | |
| CTGGTTTAGTAATTGGCCAA+TGG | - | chr2_4:9476454-9476473 | None:intergenic | 40.0% | |
| CATTGGCCAATTACTAAACC+AGG | + | chr2_4:9476452-9476471 | Msa0313960:CDS | 40.0% | |
| TTAGTGTCTATCGCTGAGTA+TGG | + | chr2_4:9476774-9476793 | Msa0313960:intron | 40.0% | |
| TTTCCACACTCAATGGTTGA+TGG | - | chr2_4:9477122-9477141 | None:intergenic | 40.0% | |
| ACCATTGAGTGTGGAAAAAG+AGG | + | chr2_4:9477125-9477144 | Msa0313960:CDS | 40.0% | |
| ! | ACCTCTTTTTCCACACTCAA+TGG | - | chr2_4:9477129-9477148 | None:intergenic | 40.0% |
| ! | TCCTCTATTTTCCTTTGTCG+TGG | + | chr2_4:9477223-9477242 | Msa0313960:intron | 40.0% |
| TCCACGACAAAGGAAAATAG+AGG | - | chr2_4:9477227-9477246 | None:intergenic | 40.0% | |
| ! | TGTTTTCGCACACAGTTAAG+CGG | + | chr2_4:9477418-9477437 | Msa0313960:intron | 40.0% |
| GCATTGGAAAACAACACCTT+TGG | - | chr2_4:9477850-9477869 | None:intergenic | 40.0% | |
| CCATCAAGTAACAGGGAAAA+TGG | - | chr2_4:9478208-9478227 | None:intergenic | 40.0% | |
| !! | CCATTTTCCCTGTTACTTGA+TGG | + | chr2_4:9478205-9478224 | Msa0313960:intron | 40.0% |
| TGAGCAAGAGCAATTCTTCA+AGG | + | chr2_4:9478236-9478255 | Msa0313960:CDS | 40.0% | |
| ! | CAAAGGAAGAGGATTTTGAG+AGG | + | chr2_4:9478292-9478311 | Msa0313960:CDS | 40.0% |
| AAGGTGAAGAAGACAACTAC+TGG | + | chr2_4:9478336-9478355 | Msa0313960:CDS | 40.0% | |
| AAAAGCGGTGAATTGGAGTT+TGG | - | chr2_4:9478412-9478431 | None:intergenic | 40.0% | |
| CCAAACAAAAAGCGGTGAAT+TGG | - | chr2_4:9478419-9478438 | None:intergenic | 40.0% | |
| !!! | CCAATTCACCGCTTTTTGTT+TGG | + | chr2_4:9478416-9478435 | Msa0313960:intron | 40.0% |
| ! | CGTTTTTCCTTTTCCACGAA+AGG | + | chr2_4:9478628-9478647 | Msa0313960:intron | 40.0% |
| !!! | TGCTGCTGTTCTGTTTTGAT+AGG | + | chr2_4:9478944-9478963 | Msa0313960:intron | 40.0% |
| !! | GGAGGAAGCATTAGTGTTAA+TGG | - | chr2_4:9479116-9479135 | None:intergenic | 40.0% |
| AGGGTGATTGAGGTAATGAA+GGG | + | chr2_4:9479181-9479200 | Msa0313960:intron | 40.0% | |
| TGAGGTAATGAAGGGACTAA+TGG | + | chr2_4:9479189-9479208 | Msa0313960:intron | 40.0% | |
| !!! | GAAGGGACTAATGGTTTTGT+TGG | + | chr2_4:9479198-9479217 | Msa0313960:intron | 40.0% |
| ! | TGCAGTGGTTTGAAATAAGC+AGG | + | chr2_4:9475195-9475214 | Msa0313960:five_prime_UTR | 40.0% |
| ATTGGTTGAGATCTGACAGA+AGG | + | chr2_4:9475356-9475375 | Msa0313960:CDS | 40.0% | |
| TTGGTTGAGATCTGACAGAA+GGG | + | chr2_4:9475357-9475376 | Msa0313960:CDS | 40.0% | |
| CTGGTCAATAGATGGATGAT+TGG | + | chr2_4:9475542-9475561 | Msa0313960:intron | 40.0% | |
| GCATTGTTGATCACACTTTC+TGG | + | chr2_4:9475672-9475691 | Msa0313960:intron | 40.0% | |
| TTGTTGATCACACTTTCTGG+TGG | + | chr2_4:9475675-9475694 | Msa0313960:intron | 40.0% | |
| TTCTAGATCAGATGCCTCAA+AGG | - | chr2_4:9475725-9475744 | None:intergenic | 40.0% | |
| GTTGCAACGGATATATGACA+AGG | - | chr2_4:9475839-9475858 | None:intergenic | 40.0% | |
| ! | ATTGATTCAGCTGATGGTGA+GGG | - | chr2_4:9476224-9476243 | None:intergenic | 40.0% |
| CTTAGAGATTTCTGCAGAGT+AGG | - | chr2_4:9476301-9476320 | None:intergenic | 40.0% | |
| CTACTCTGCAGAAATCTCTA+AGG | + | chr2_4:9476299-9476318 | Msa0313960:intron | 40.0% | |
| CTGGTTTAGTAATTGGCCAA+TGG | - | chr2_4:9476454-9476473 | None:intergenic | 40.0% | |
| CATTGGCCAATTACTAAACC+AGG | + | chr2_4:9476452-9476471 | Msa0313960:CDS | 40.0% | |
| TTAGTGTCTATCGCTGAGTA+TGG | + | chr2_4:9476774-9476793 | Msa0313960:intron | 40.0% | |
| TTTCCACACTCAATGGTTGA+TGG | - | chr2_4:9477122-9477141 | None:intergenic | 40.0% | |
| ACCATTGAGTGTGGAAAAAG+AGG | + | chr2_4:9477125-9477144 | Msa0313960:CDS | 40.0% | |
| ! | ACCTCTTTTTCCACACTCAA+TGG | - | chr2_4:9477129-9477148 | None:intergenic | 40.0% |
| ! | TCCTCTATTTTCCTTTGTCG+TGG | + | chr2_4:9477223-9477242 | Msa0313960:intron | 40.0% |
| TCCACGACAAAGGAAAATAG+AGG | - | chr2_4:9477227-9477246 | None:intergenic | 40.0% | |
| ! | TGTTTTCGCACACAGTTAAG+CGG | + | chr2_4:9477418-9477437 | Msa0313960:intron | 40.0% |
| GCATTGGAAAACAACACCTT+TGG | - | chr2_4:9477850-9477869 | None:intergenic | 40.0% | |
| CCATCAAGTAACAGGGAAAA+TGG | - | chr2_4:9478208-9478227 | None:intergenic | 40.0% | |
| !! | CCATTTTCCCTGTTACTTGA+TGG | + | chr2_4:9478205-9478224 | Msa0313960:intron | 40.0% |
| TGAGCAAGAGCAATTCTTCA+AGG | + | chr2_4:9478236-9478255 | Msa0313960:CDS | 40.0% | |
| ! | CAAAGGAAGAGGATTTTGAG+AGG | + | chr2_4:9478292-9478311 | Msa0313960:CDS | 40.0% |
| AAGGTGAAGAAGACAACTAC+TGG | + | chr2_4:9478336-9478355 | Msa0313960:CDS | 40.0% | |
| AAAAGCGGTGAATTGGAGTT+TGG | - | chr2_4:9478412-9478431 | None:intergenic | 40.0% | |
| CCAAACAAAAAGCGGTGAAT+TGG | - | chr2_4:9478419-9478438 | None:intergenic | 40.0% | |
| !!! | CCAATTCACCGCTTTTTGTT+TGG | + | chr2_4:9478416-9478435 | Msa0313960:intron | 40.0% |
| ! | CGTTTTTCCTTTTCCACGAA+AGG | + | chr2_4:9478628-9478647 | Msa0313960:intron | 40.0% |
| !!! | TGCTGCTGTTCTGTTTTGAT+AGG | + | chr2_4:9478944-9478963 | Msa0313960:intron | 40.0% |
| !! | GGAGGAAGCATTAGTGTTAA+TGG | - | chr2_4:9479116-9479135 | None:intergenic | 40.0% |
| AGGGTGATTGAGGTAATGAA+GGG | + | chr2_4:9479181-9479200 | Msa0313960:intron | 40.0% | |
| TGAGGTAATGAAGGGACTAA+TGG | + | chr2_4:9479189-9479208 | Msa0313960:intron | 40.0% | |
| !!! | GAAGGGACTAATGGTTTTGT+TGG | + | chr2_4:9479198-9479217 | Msa0313960:intron | 40.0% |
| TGGAAATGGTTGCTGCAGAT+TGG | + | chr2_4:9475338-9475357 | Msa0313960:CDS | 45.0% | |
| GACAGAAGGGAAGATGATCT+TGG | + | chr2_4:9475370-9475389 | Msa0313960:CDS | 45.0% | |
| AGAAGGGAAGATGATCTTGG+TGG | + | chr2_4:9475373-9475392 | Msa0313960:CDS | 45.0% | |
| ! | AGCATTGTGCAGGTTGACTT+TGG | + | chr2_4:9475406-9475425 | Msa0313960:intron | 45.0% |
| !!! | GCAGGTTGACTTTGGTGTTT+TGG | + | chr2_4:9475414-9475433 | Msa0313960:intron | 45.0% |
| AGATCAGATGCCTCAAAGGT+AGG | - | chr2_4:9475721-9475740 | None:intergenic | 45.0% | |
| CTGTGACTCGAAAGTTGCAA+CGG | - | chr2_4:9475852-9475871 | None:intergenic | 45.0% | |
| AGCTGCTTGCAATCTCTCTA+TGG | + | chr2_4:9476181-9476200 | Msa0313960:intron | 45.0% | |
| ! | GATTGATTCAGCTGATGGTG+AGG | - | chr2_4:9476225-9476244 | None:intergenic | 45.0% |
| TCAGGCAAGTGGCTAGAAAA+AGG | - | chr2_4:9476985-9477004 | None:intergenic | 45.0% | |
| GAAACAGAAGATCAGGCAAG+TGG | - | chr2_4:9476996-9477015 | None:intergenic | 45.0% | |
| ! | TTTTCAGACATCAGACGCAG+AGG | - | chr2_4:9477018-9477037 | None:intergenic | 45.0% |
| ACTCCATCAACCATTGAGTG+TGG | + | chr2_4:9477116-9477135 | Msa0313960:CDS | 45.0% | |
| TCAAACCCATTCCACGACAA+AGG | - | chr2_4:9477237-9477256 | None:intergenic | 45.0% | |
| CCATCCACATTCTCCCTTAT+GGG | + | chr2_4:9478123-9478142 | Msa0313960:intron | 45.0% | |
| GAAACCCATAAGGGAGAATG+TGG | - | chr2_4:9478130-9478149 | None:intergenic | 45.0% | |
| TACTGGTCCCACTAATGCAA+AGG | + | chr2_4:9478353-9478372 | Msa0313960:intron | 45.0% | |
| CGTTCCTCCTTTGCATTAGT+GGG | - | chr2_4:9478363-9478382 | None:intergenic | 45.0% | |
| CCACTAATGCAAAGGAGGAA+CGG | + | chr2_4:9478361-9478380 | Msa0313960:intron | 45.0% | |
| ! | TCCTTTTCCACGAAAGGTTG+AGG | + | chr2_4:9478634-9478653 | Msa0313960:intron | 45.0% |
| TCCTCAACCTTTCGTGGAAA+AGG | - | chr2_4:9478638-9478657 | None:intergenic | 45.0% | |
| !!! | GTTCCTTTGGGGCAGTTTTT+CGG | + | chr2_4:9478859-9478878 | Msa0313960:intron | 45.0% |
| !!! | TTCCTTTGGGGCAGTTTTTC+GGG | + | chr2_4:9478860-9478879 | Msa0313960:intron | 45.0% |
| ACATGAACTGAGGGTGATTG+AGG | + | chr2_4:9479171-9479190 | Msa0313960:intron | 45.0% | |
| GAGGGTGATTGAGGTAATGA+AGG | + | chr2_4:9479180-9479199 | Msa0313960:intron | 45.0% | |
| TGGAAATGGTTGCTGCAGAT+TGG | + | chr2_4:9475338-9475357 | Msa0313960:CDS | 45.0% | |
| GACAGAAGGGAAGATGATCT+TGG | + | chr2_4:9475370-9475389 | Msa0313960:CDS | 45.0% | |
| AGAAGGGAAGATGATCTTGG+TGG | + | chr2_4:9475373-9475392 | Msa0313960:CDS | 45.0% | |
| ! | AGCATTGTGCAGGTTGACTT+TGG | + | chr2_4:9475406-9475425 | Msa0313960:intron | 45.0% |
| !!! | GCAGGTTGACTTTGGTGTTT+TGG | + | chr2_4:9475414-9475433 | Msa0313960:intron | 45.0% |
| AGATCAGATGCCTCAAAGGT+AGG | - | chr2_4:9475721-9475740 | None:intergenic | 45.0% | |
| CTGTGACTCGAAAGTTGCAA+CGG | - | chr2_4:9475852-9475871 | None:intergenic | 45.0% | |
| AGCTGCTTGCAATCTCTCTA+TGG | + | chr2_4:9476181-9476200 | Msa0313960:intron | 45.0% | |
| ! | GATTGATTCAGCTGATGGTG+AGG | - | chr2_4:9476225-9476244 | None:intergenic | 45.0% |
| TCAGGCAAGTGGCTAGAAAA+AGG | - | chr2_4:9476985-9477004 | None:intergenic | 45.0% | |
| GAAACAGAAGATCAGGCAAG+TGG | - | chr2_4:9476996-9477015 | None:intergenic | 45.0% | |
| ! | TTTTCAGACATCAGACGCAG+AGG | - | chr2_4:9477018-9477037 | None:intergenic | 45.0% |
| ACTCCATCAACCATTGAGTG+TGG | + | chr2_4:9477116-9477135 | Msa0313960:CDS | 45.0% | |
| TCAAACCCATTCCACGACAA+AGG | - | chr2_4:9477237-9477256 | None:intergenic | 45.0% | |
| CCATCCACATTCTCCCTTAT+GGG | + | chr2_4:9478123-9478142 | Msa0313960:intron | 45.0% | |
| GAAACCCATAAGGGAGAATG+TGG | - | chr2_4:9478130-9478149 | None:intergenic | 45.0% | |
| TACTGGTCCCACTAATGCAA+AGG | + | chr2_4:9478353-9478372 | Msa0313960:intron | 45.0% | |
| CGTTCCTCCTTTGCATTAGT+GGG | - | chr2_4:9478363-9478382 | None:intergenic | 45.0% | |
| CCACTAATGCAAAGGAGGAA+CGG | + | chr2_4:9478361-9478380 | Msa0313960:intron | 45.0% | |
| ! | TCCTTTTCCACGAAAGGTTG+AGG | + | chr2_4:9478634-9478653 | Msa0313960:intron | 45.0% |
| TCCTCAACCTTTCGTGGAAA+AGG | - | chr2_4:9478638-9478657 | None:intergenic | 45.0% | |
| !!! | GTTCCTTTGGGGCAGTTTTT+CGG | + | chr2_4:9478859-9478878 | Msa0313960:intron | 45.0% |
| !!! | TTCCTTTGGGGCAGTTTTTC+GGG | + | chr2_4:9478860-9478879 | Msa0313960:intron | 45.0% |
| ACATGAACTGAGGGTGATTG+AGG | + | chr2_4:9479171-9479190 | Msa0313960:intron | 45.0% | |
| GAGGGTGATTGAGGTAATGA+AGG | + | chr2_4:9479180-9479199 | Msa0313960:intron | 45.0% | |
| TCAACCTGCACAATGCTCCT+AGG | - | chr2_4:9475403-9475422 | None:intergenic | 50.0% | |
| ! | ACACTTTCTGGTGGCTATCC+AGG | + | chr2_4:9475684-9475703 | Msa0313960:intron | 50.0% |
| ! | CTTTCGAGTCACAGACACTC+TGG | + | chr2_4:9475858-9475877 | Msa0313960:intron | 50.0% |
| ! | GAAGGGTGTGTGGACATCAT+TGG | + | chr2_4:9476523-9476542 | Msa0313960:CDS | 50.0% |
| CGCAGAGGAAACAGAAGATC+AGG | - | chr2_4:9477003-9477022 | None:intergenic | 50.0% | |
| ! | GTTGATGGAGTGATCCGACA+CGG | - | chr2_4:9477107-9477126 | None:intergenic | 50.0% |
| TATTGCTCTTTGTCCCCCTC+TGG | + | chr2_4:9477154-9477173 | Msa0313960:intron | 50.0% | |
| GCCATCCACATTCTCCCTTA+TGG | + | chr2_4:9478122-9478141 | Msa0313960:intron | 50.0% | |
| CCCATAAGGGAGAATGTGGA+TGG | - | chr2_4:9478126-9478145 | None:intergenic | 50.0% | |
| !! | GGATTTTGAGAGGATGCAGC+AGG | + | chr2_4:9478302-9478321 | Msa0313960:CDS | 50.0% |
| TGGTCCCACTAATGCAAAGG+AGG | + | chr2_4:9478356-9478375 | Msa0313960:intron | 50.0% | |
| CCGTTCCTCCTTTGCATTAG+TGG | - | chr2_4:9478364-9478383 | None:intergenic | 50.0% | |
| CTCGATTCCTCAACCTTTCG+TGG | - | chr2_4:9478644-9478663 | None:intergenic | 50.0% | |
| CACGAAAGGTTGAGGAATCG+AGG | + | chr2_4:9478642-9478661 | Msa0313960:intron | 50.0% | |
| GGTTGAGGAATCGAGGATCT+AGG | + | chr2_4:9478649-9478668 | Msa0313960:intron | 50.0% | |
| TGAGGAATCGAGGATCTAGG+TGG | + | chr2_4:9478652-9478671 | Msa0313960:intron | 50.0% | |
| AACCCGAAAAACTGCCCCAA+AGG | - | chr2_4:9478865-9478884 | None:intergenic | 50.0% | |
| !!! | GGTTTTGTTGGTGCTGTTGC+AGG | + | chr2_4:9479210-9479229 | Msa0313960:intron | 50.0% |
| ! | GCATGTTTTGTCGGGGCTTT+AGG | + | chr2_4:9479249-9479268 | Msa0313960:CDS | 50.0% |
| TCAACCTGCACAATGCTCCT+AGG | - | chr2_4:9475403-9475422 | None:intergenic | 50.0% | |
| ! | ACACTTTCTGGTGGCTATCC+AGG | + | chr2_4:9475684-9475703 | Msa0313960:intron | 50.0% |
| ! | CTTTCGAGTCACAGACACTC+TGG | + | chr2_4:9475858-9475877 | Msa0313960:intron | 50.0% |
| ! | GAAGGGTGTGTGGACATCAT+TGG | + | chr2_4:9476523-9476542 | Msa0313960:CDS | 50.0% |
| CGCAGAGGAAACAGAAGATC+AGG | - | chr2_4:9477003-9477022 | None:intergenic | 50.0% | |
| ! | GTTGATGGAGTGATCCGACA+CGG | - | chr2_4:9477107-9477126 | None:intergenic | 50.0% |
| TATTGCTCTTTGTCCCCCTC+TGG | + | chr2_4:9477154-9477173 | Msa0313960:intron | 50.0% | |
| GCCATCCACATTCTCCCTTA+TGG | + | chr2_4:9478122-9478141 | Msa0313960:intron | 50.0% | |
| CCCATAAGGGAGAATGTGGA+TGG | - | chr2_4:9478126-9478145 | None:intergenic | 50.0% | |
| !! | GGATTTTGAGAGGATGCAGC+AGG | + | chr2_4:9478302-9478321 | Msa0313960:CDS | 50.0% |
| TGGTCCCACTAATGCAAAGG+AGG | + | chr2_4:9478356-9478375 | Msa0313960:intron | 50.0% | |
| CCGTTCCTCCTTTGCATTAG+TGG | - | chr2_4:9478364-9478383 | None:intergenic | 50.0% | |
| CTCGATTCCTCAACCTTTCG+TGG | - | chr2_4:9478644-9478663 | None:intergenic | 50.0% | |
| CACGAAAGGTTGAGGAATCG+AGG | + | chr2_4:9478642-9478661 | Msa0313960:intron | 50.0% | |
| GGTTGAGGAATCGAGGATCT+AGG | + | chr2_4:9478649-9478668 | Msa0313960:intron | 50.0% | |
| TGAGGAATCGAGGATCTAGG+TGG | + | chr2_4:9478652-9478671 | Msa0313960:intron | 50.0% | |
| AACCCGAAAAACTGCCCCAA+AGG | - | chr2_4:9478865-9478884 | None:intergenic | 50.0% | |
| !!! | GGTTTTGTTGGTGCTGTTGC+AGG | + | chr2_4:9479210-9479229 | Msa0313960:intron | 50.0% |
| ! | GCATGTTTTGTCGGGGCTTT+AGG | + | chr2_4:9479249-9479268 | Msa0313960:CDS | 50.0% |
| ! | ATGATCTTGGTGGCCGTCCT+AGG | + | chr2_4:9475383-9475402 | Msa0313960:CDS | 55.0% |
| CCTGCACAATGCTCCTAGGA+CGG | - | chr2_4:9475399-9475418 | None:intergenic | 55.0% | |
| !! | GTGGCAGGGGCATGTTTTGT+CGG | + | chr2_4:9479240-9479259 | Msa0313960:CDS | 55.0% |
| !! | TGGCAGGGGCATGTTTTGTC+GGG | + | chr2_4:9479241-9479260 | Msa0313960:CDS | 55.0% |
| ! | ATGATCTTGGTGGCCGTCCT+AGG | + | chr2_4:9475383-9475402 | Msa0313960:CDS | 55.0% |
| CCTGCACAATGCTCCTAGGA+CGG | - | chr2_4:9475399-9475418 | None:intergenic | 55.0% | |
| !! | GTGGCAGGGGCATGTTTTGT+CGG | + | chr2_4:9479240-9479259 | Msa0313960:CDS | 55.0% |
| !! | TGGCAGGGGCATGTTTTGTC+GGG | + | chr2_4:9479241-9479260 | Msa0313960:CDS | 55.0% |
| !! | CCGTCCTAGGAGCATTGTGC+AGG | + | chr2_4:9475396-9475415 | Msa0313960:CDS | 60.0% |
| ! | GCAGCAGGAAGAGCGTGAGA+AGG | + | chr2_4:9478317-9478336 | Msa0313960:CDS | 60.0% |
| !! | GTTGGTGCTGTTGCAGGAGC+TGG | + | chr2_4:9479216-9479235 | Msa0313960:intron | 60.0% |
| TGCTGTTGCAGGAGCTGGTG+TGG | + | chr2_4:9479221-9479240 | Msa0313960:intron | 60.0% | |
| TTGCAGGAGCTGGTGTGGCA+GGG | + | chr2_4:9479226-9479245 | Msa0313960:intron | 60.0% | |
| !! | GGCAGGGGCATGTTTTGTCG+GGG | + | chr2_4:9479242-9479261 | Msa0313960:CDS | 60.0% |
| !! | CCGTCCTAGGAGCATTGTGC+AGG | + | chr2_4:9475396-9475415 | Msa0313960:CDS | 60.0% |
| ! | GCAGCAGGAAGAGCGTGAGA+AGG | + | chr2_4:9478317-9478336 | Msa0313960:CDS | 60.0% |
| !! | GTTGGTGCTGTTGCAGGAGC+TGG | + | chr2_4:9479216-9479235 | Msa0313960:intron | 60.0% |
| TGCTGTTGCAGGAGCTGGTG+TGG | + | chr2_4:9479221-9479240 | Msa0313960:intron | 60.0% | |
| TTGCAGGAGCTGGTGTGGCA+GGG | + | chr2_4:9479226-9479245 | Msa0313960:intron | 60.0% | |
| !! | GGCAGGGGCATGTTTTGTCG+GGG | + | chr2_4:9479242-9479261 | Msa0313960:CDS | 60.0% |
| GGGGAGCTACAGCTCCGTGT+CGG | + | chr2_4:9477090-9477109 | Msa0313960:CDS | 65.0% | |
| GTTGCAGGAGCTGGTGTGGC+AGG | + | chr2_4:9479225-9479244 | Msa0313960:intron | 65.0% | |
| TGCAGGAGCTGGTGTGGCAG+GGG | + | chr2_4:9479227-9479246 | Msa0313960:intron | 65.0% | |
| !! | GGGGCTTTAGGTGCTGCAGC+AGG | + | chr2_4:9479261-9479280 | Msa0313960:CDS | 65.0% |
| GGGGAGCTACAGCTCCGTGT+CGG | + | chr2_4:9477090-9477109 | Msa0313960:CDS | 65.0% | |
| GTTGCAGGAGCTGGTGTGGC+AGG | + | chr2_4:9479225-9479244 | Msa0313960:intron | 65.0% | |
| TGCAGGAGCTGGTGTGGCAG+GGG | + | chr2_4:9479227-9479246 | Msa0313960:intron | 65.0% | |
| !! | GGGGCTTTAGGTGCTGCAGC+AGG | + | chr2_4:9479261-9479280 | Msa0313960:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 9475195 | 9479290 | 9475195 | ID=Msa0313960;Name=Msa0313960 |
| chr2_4 | mRNA | 9475195 | 9479290 | 9475195 | ID=Msa0313960-mRNA-1;Parent=Msa0313960;Name=Msa0313960-mRNA-1;_AED=0.46;_eAED=0.46;_QI=142|0.33|0.28|0.57|1|1|7|0|215 |
| chr2_4 | exon | 9475195 | 9475417 | 9475195 | ID=Msa0313960-mRNA-1:exon:3648;Parent=Msa0313960-mRNA-1 |
| chr2_4 | exon | 9475706 | 9475747 | 9475706 | ID=Msa0313960-mRNA-1:exon:3649;Parent=Msa0313960-mRNA-1 |
| chr2_4 | exon | 9476310 | 9476320 | 9476310 | ID=Msa0313960-mRNA-1:exon:3650;Parent=Msa0313960-mRNA-1 |
| chr2_4 | exon | 9476415 | 9476588 | 9476415 | ID=Msa0313960-mRNA-1:exon:3651;Parent=Msa0313960-mRNA-1 |
| chr2_4 | exon | 9476993 | 9477146 | 9476993 | ID=Msa0313960-mRNA-1:exon:3652;Parent=Msa0313960-mRNA-1 |
| chr2_4 | exon | 9478231 | 9478357 | 9478231 | ID=Msa0313960-mRNA-1:exon:3653;Parent=Msa0313960-mRNA-1 |
| chr2_4 | exon | 9479232 | 9479290 | 9479232 | ID=Msa0313960-mRNA-1:exon:3654;Parent=Msa0313960-mRNA-1 |
| chr2_4 | five_prime_UTR | 9475195 | 9475336 | 9475195 | ID=Msa0313960-mRNA-1:five_prime_utr;Parent=Msa0313960-mRNA-1 |
| chr2_4 | CDS | 9475337 | 9475417 | 9475337 | ID=Msa0313960-mRNA-1:cds;Parent=Msa0313960-mRNA-1 |
| chr2_4 | CDS | 9475706 | 9475747 | 9475706 | ID=Msa0313960-mRNA-1:cds;Parent=Msa0313960-mRNA-1 |
| chr2_4 | CDS | 9476310 | 9476320 | 9476310 | ID=Msa0313960-mRNA-1:cds;Parent=Msa0313960-mRNA-1 |
| chr2_4 | CDS | 9476415 | 9476588 | 9476415 | ID=Msa0313960-mRNA-1:cds;Parent=Msa0313960-mRNA-1 |
| chr2_4 | CDS | 9476993 | 9477146 | 9476993 | ID=Msa0313960-mRNA-1:cds;Parent=Msa0313960-mRNA-1 |
| chr2_4 | CDS | 9478231 | 9478357 | 9478231 | ID=Msa0313960-mRNA-1:cds;Parent=Msa0313960-mRNA-1 |
| chr2_4 | CDS | 9479232 | 9479290 | 9479232 | ID=Msa0313960-mRNA-1:cds;Parent=Msa0313960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
