Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923830 | XP_013442684.1 | 90.411 | 584 | 41 | 2 | 1 | 579 | 1 | 574 | 0.0 | 1036 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923830 | sp|Q8L6Z7|EXO1_ARATH | 43.768 | 345 | 179 | 5 | 1 | 342 | 1 | 333 | 1.92e-86 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0153210 | Msa0923830 | 0.800395 | 1.470429e-48 | -8.615850e-47 |
| Msa0901890 | Msa0923830 | 0.900571 | 6.415434e-78 | -8.615850e-47 |
| Msa0923830 | Msa0962890 | 0.863675 | 2.101364e-64 | -8.615850e-47 |
| Msa0923830 | Msa1454010 | 0.803454 | 3.460009e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923830 | MtrunA17_Chr6g0482931 | 90.411 | 584 | 41 | 2 | 1 | 579 | 1 | 574 | 0.0 | 1036 |
| Msa0923830 | MtrunA17_Chr8g0380081 | 42.284 | 324 | 168 | 6 | 1 | 319 | 1 | 310 | 3.55e-84 | 265 |
| Msa0923830 | MtrunA17_Chr1g0193411 | 24.496 | 347 | 236 | 10 | 1 | 333 | 1 | 335 | 1.94e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923830 | AT1G18090.1 | 54.832 | 476 | 197 | 5 | 1 | 471 | 1 | 463 | 7.50e-179 | 518 |
| Msa0923830 | AT1G18090.2 | 54.622 | 476 | 198 | 5 | 1 | 471 | 1 | 463 | 2.35e-178 | 516 |
| Msa0923830 | AT1G29630.2 | 43.768 | 345 | 179 | 5 | 1 | 342 | 1 | 333 | 1.95e-87 | 286 |
| Msa0923830 | AT1G29630.1 | 48.947 | 190 | 90 | 2 | 1 | 190 | 1 | 183 | 1.88e-51 | 187 |
| Msa0923830 | AT1G29630.3 | 40.000 | 175 | 97 | 3 | 171 | 342 | 10 | 179 | 1.84e-31 | 129 |
Find 92 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGCTTCAGAACTCTTTC+AGG | 0.171774 | 6_2:-64897795 | Msa0923830:intron |
| CCAATTAACTTTCAAGAAAA+AGG | 0.183419 | 6_2:-64894398 | Msa0923830:CDS |
| CTTCCATCTGTTCCTGGAAT+TGG | 0.223676 | 6_2:-64896553 | Msa0923830:CDS |
| TTCGATTCCAGATACCATTT+TGG | 0.245906 | 6_2:-64894766 | Msa0923830:intron |
| CTTCATGTGCTTGAGCTCTT+TGG | 0.248708 | 6_2:+64895976 | None:intergenic |
| GTCACTGATGAACAGGTTTC+AGG | 0.261774 | 6_2:-64894317 | Msa0923830:CDS |
| TGAGTTTCATCAAATGTAAA+TGG | 0.262758 | 6_2:+64894560 | None:intergenic |
| ACACGAGGAGGAAATAAATT+TGG | 0.270972 | 6_2:-64894498 | Msa0923830:CDS |
| TGATGCTTTATGCTTGAATA+TGG | 0.271831 | 6_2:-64894273 | Msa0923830:CDS |
| AAAGAAATCCAAGAAGAAAA+AGG | 0.282205 | 6_2:-64894183 | Msa0923830:CDS |
| TCCAACCTTGAAACTGAAAA+AGG | 0.300940 | 6_2:-64897096 | Msa0923830:CDS |
| TTTAGCTTATTCGTGTAGTA+TGG | 0.302754 | 6_2:-64898129 | Msa0923830:intron |
| GCATATTCATGGCTTCATAA+AGG | 0.327393 | 6_2:-64899564 | Msa0923830:CDS |
| CTGAAGTGCCGTTACTTCAT+TGG | 0.329550 | 6_2:+64894625 | None:intergenic |
| TCAAAGGCTTCCTTAGTTGA+TGG | 0.343464 | 6_2:+64895451 | None:intergenic |
| GAAGGATTTGGCATAATCTT+CGG | 0.358784 | 6_2:+64896134 | None:intergenic |
| ATCCGAAAAGGATTATTGTT+AGG | 0.361413 | 6_2:+64894527 | None:intergenic |
| AAGGATTTGGCATAATCTTC+GGG | 0.365199 | 6_2:+64896135 | None:intergenic |
| CATATTCATGGCTTCATAAA+GGG | 0.367960 | 6_2:-64899563 | Msa0923830:CDS |
| ACAGTATCAATATTCCAAAA+TGG | 0.374302 | 6_2:+64894752 | None:intergenic |
| AAGTGCATCCTTGAAGGATT+TGG | 0.375301 | 6_2:+64896122 | None:intergenic |
| CAAGCACATGAAGCCTCTTC+CGG | 0.378622 | 6_2:-64895966 | Msa0923830:CDS |
| ACATATACCATGCTAGAAAC+TGG | 0.387867 | 6_2:+64894711 | None:intergenic |
| TATGGCTCATAAGCTAATTC+AGG | 0.388193 | 6_2:-64897293 | Msa0923830:intron |
| GCGTAGTTCTTGATATGAAT+TGG | 0.392195 | 6_2:+64899723 | None:intergenic |
| AAATGAAGGTTTACAAGATT+CGG | 0.392719 | 6_2:+64896841 | None:intergenic |
| AGTGACTCAAGAAAACTTTC+CGG | 0.394862 | 6_2:+64895947 | None:intergenic |
| AATAAATTTGGTTCAGAAAG+AGG | 0.396492 | 6_2:-64894486 | Msa0923830:CDS |
| AAACCTACGAACATTGCAAA+TGG | 0.398614 | 6_2:-64899787 | Msa0923830:exon |
| ATATCGAAACTTTGAAATGA+AGG | 0.404770 | 6_2:+64896827 | None:intergenic |
| TTCTTTCGCCATTCCCGTCA+CGG | 0.413869 | 6_2:+64896888 | None:intergenic |
| AACTGAGCATCTGCTTCATA+TGG | 0.416714 | 6_2:+64897129 | None:intergenic |
| ATTGTTTCATTTGTTTCCAA+TGG | 0.417616 | 6_2:+64894590 | None:intergenic |
| TCCTGAGTTGACCAATGGTA+TGG | 0.418566 | 6_2:+64895386 | None:intergenic |
| CCAATGGTATGGGGATCAAT+GGG | 0.419906 | 6_2:+64895397 | None:intergenic |
| ATTTGATGAAACTCATTTGA+AGG | 0.420604 | 6_2:-64894552 | Msa0923830:CDS |
| AGTAGAAGTCACTGATGAAC+AGG | 0.422610 | 6_2:-64894324 | Msa0923830:CDS |
| ACCAATGGTATGGGGATCAA+TGG | 0.429092 | 6_2:+64895396 | None:intergenic |
| TACAACAAACTCAATGTTCT+CGG | 0.429534 | 6_2:+64897155 | None:intergenic |
| TTCTCAGTTGCTGCTTTGCA+AGG | 0.434081 | 6_2:+64897984 | None:intergenic |
| TGGGTATTGATGCATATTCA+TGG | 0.440605 | 6_2:-64899575 | Msa0923830:CDS |
| TGGGGATCAATGGGGTGTAA+AGG | 0.443266 | 6_2:+64895406 | None:intergenic |
| AACAGCAAGTGCATCCTTGA+AGG | 0.446780 | 6_2:+64896116 | None:intergenic |
| ATATGAATTGGTTCAACGTA+AGG | 0.447887 | 6_2:+64899735 | None:intergenic |
| TCAAGAAAACTTTCCGGAAG+AGG | 0.455673 | 6_2:+64895953 | None:intergenic |
| AGTGAATATTACTCCCGTTA+TGG | 0.456097 | 6_2:-64897311 | Msa0923830:CDS |
| GCTCGAGCAACACCAATTCC+AGG | 0.467358 | 6_2:+64896541 | None:intergenic |
| TATTCCGATACTTCAAAACT+AGG | 0.469117 | 6_2:+64896512 | None:intergenic |
| TGCATAGAGTGAATCTGCTT+CGG | 0.473122 | 6_2:-64898052 | Msa0923830:CDS |
| CTATAAGTCTCTCAAAGAAA+AGG | 0.481150 | 6_2:-64894373 | Msa0923830:CDS |
| AGTTCTGATTTGAAAGGAAG+TGG | 0.482769 | 6_2:-64894215 | Msa0923830:CDS |
| GAAGTGTAAAGTCTAAGATT+AGG | 0.486053 | 6_2:-64894241 | Msa0923830:CDS |
| CCTGAGTTGACCAATGGTAT+GGG | 0.491119 | 6_2:+64895387 | None:intergenic |
| AAACTTGAATCCATCAACTA+AGG | 0.492672 | 6_2:-64895461 | Msa0923830:CDS |
| TCTGTTCTTAAGCTTGAGAA+AGG | 0.495968 | 6_2:-64896168 | Msa0923830:CDS |
| ATTGCTTTGACTATAGTTGA+GGG | 0.500256 | 6_2:+64895493 | None:intergenic |
| AACCTACGAACATTGCAAAT+GGG | 0.502158 | 6_2:-64899786 | Msa0923830:exon |
| ATATTGATACTGTGCGAACT+AGG | 0.514948 | 6_2:-64894742 | Msa0923830:CDS |
| TCAGAAACTGATCATGCCAT+TGG | 0.517797 | 6_2:-64894606 | Msa0923830:CDS |
| CGAAAGAATAGAGTTAGAGA+AGG | 0.520110 | 6_2:-64896873 | Msa0923830:CDS |
| GCAATGGCTAAGCTCAAAGA+AGG | 0.521067 | 6_2:-64897827 | Msa0923830:CDS |
| ATTAGCTTATGAGCCATAAC+GGG | 0.524793 | 6_2:+64897298 | None:intergenic |
| TATTGCTTTGACTATAGTTG+AGG | 0.533953 | 6_2:+64895492 | None:intergenic |
| AGATTATGCCAAATCCTTCA+AGG | 0.535204 | 6_2:-64896130 | Msa0923830:CDS |
| GTCTTGATTCTGATAGTGAA+AGG | 0.537551 | 6_2:-64898100 | Msa0923830:CDS |
| AATTAGCTTATGAGCCATAA+CGG | 0.541559 | 6_2:+64897297 | None:intergenic |
| AAGATGGACCGTGACGGGAA+TGG | 0.545823 | 6_2:-64896896 | Msa0923830:CDS |
| AGGAATAGTTCTGATTTGAA+AGG | 0.551955 | 6_2:-64894221 | Msa0923830:CDS |
| CCCATTGATCCCCATACCAT+TGG | 0.554789 | 6_2:-64895397 | Msa0923830:CDS |
| ATTTAATCCAGTTTCTAGCA+TGG | 0.562068 | 6_2:-64894718 | Msa0923830:CDS |
| GATAGTGATCTGTTAACGTA+TGG | 0.564904 | 6_2:-64897048 | Msa0923830:CDS |
| CCCATACCATTGGTCAACTC+AGG | 0.567256 | 6_2:-64895387 | Msa0923830:CDS |
| AGAACATTCAGATTTATCAA+AGG | 0.570621 | 6_2:+64895435 | None:intergenic |
| TAAGTATTCCAATGAAGTAA+CGG | 0.577244 | 6_2:-64894633 | Msa0923830:CDS |
| ACACCAATTCCAGGAACAGA+TGG | 0.577825 | 6_2:+64896550 | None:intergenic |
| CTGAGTTGACCAATGGTATG+GGG | 0.582491 | 6_2:+64895388 | None:intergenic |
| ATTCATATCAAGAACTACGC+TGG | 0.588166 | 6_2:-64899720 | Msa0923830:CDS |
| TCTCTTTATCTGCAGTGACA+AGG | 0.588984 | 6_2:-64894670 | Msa0923830:CDS |
| ATAGTCAAAGCAATAGCTGA+AGG | 0.594326 | 6_2:-64895484 | Msa0923830:CDS |
| ATTCCGATACTTCAAAACTA+GGG | 0.596042 | 6_2:+64896513 | None:intergenic |
| TCTGATTTGAAAGGAAGTGG+TGG | 0.597202 | 6_2:-64894212 | Msa0923830:CDS |
| TTCCCATTTGCAATGTTCGT+AGG | 0.598469 | 6_2:+64899784 | None:intergenic |
| AAGCAGCAACTGAGAAAGAG+AGG | 0.604690 | 6_2:-64897977 | Msa0923830:CDS |
| GGTTCAGAAAGAGGAAACAA+TGG | 0.605526 | 6_2:-64894477 | Msa0923830:CDS |
| ATATTCATGGCTTCATAAAG+GGG | 0.632304 | 6_2:-64899562 | Msa0923830:CDS |
| GGTTTCAGGAGTGACTGAAG+TGG | 0.640700 | 6_2:-64894303 | Msa0923830:CDS |
| CTGATAGTGAAAGGAAATTG+CGG | 0.646657 | 6_2:-64898091 | Msa0923830:CDS |
| TCGGATAAGAAAACACGAGG+AGG | 0.676541 | 6_2:-64894510 | Msa0923830:CDS |
| CAATGGCTAAGCTCAAAGAA+GGG | 0.677217 | 6_2:-64897826 | Msa0923830:CDS |
| CAATGGTATGGGGATCAATG+GGG | 0.687422 | 6_2:+64895398 | None:intergenic |
| TATTCATGGCTTCATAAAGG+GGG | 0.697515 | 6_2:-64899561 | Msa0923830:intron |
| TGCTTGAATATGGAGTCACA+AGG | 0.699784 | 6_2:-64894263 | Msa0923830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATATATGTGATAAT+AGG | + | chr6_2:64897680-64897699 | None:intergenic | 10.0% |
| !! | TAAAACTAATTACATATATA+AGG | + | chr6_2:64898375-64898394 | None:intergenic | 10.0% |
| !!! | AATATTTATGGTGATATTTT+AGG | - | chr6_2:64894673-64894692 | Msa0923830:CDS | 15.0% |
| !! | TAGAAATAAATCTTAAAAGT+AGG | - | chr6_2:64894769-64894788 | Msa0923830:intron | 15.0% |
| !!! | ATTTAATTTATATACACTGA+CGG | - | chr6_2:64894792-64894811 | Msa0923830:intron | 15.0% |
| !!! | AATATTTATGGAGATATTTT+AGG | - | chr6_2:64894860-64894879 | Msa0923830:intron | 15.0% |
| !! | AAAAAACAATGGTTATTTAT+GGG | - | chr6_2:64896211-64896230 | Msa0923830:intron | 15.0% |
| !!! | TGTTTTTATAACAAAAGATA+AGG | - | chr6_2:64896411-64896430 | Msa0923830:intron | 15.0% |
| !! | CTTATATATAATCACTTAAA+CGG | + | chr6_2:64898148-64898167 | None:intergenic | 15.0% |
| !!! | TTTTAATTCATCTTTTGAAA+TGG | + | chr6_2:64898177-64898196 | None:intergenic | 15.0% |
| !!! | ACAATTTTTATTGATATTCT+GGG | + | chr6_2:64898644-64898663 | None:intergenic | 15.0% |
| !!! | TACAATTTTTATTGATATTC+TGG | + | chr6_2:64898645-64898664 | None:intergenic | 15.0% |
| !! | AATATCAATAAAAATTGTAC+AGG | - | chr6_2:64898646-64898665 | Msa0923830:intron | 15.0% |
| !! | GTAAAAATCAAAACTTTGAA+TGG | + | chr6_2:64894281-64894300 | None:intergenic | 20.0% |
| !!! | TTTTTACTCAAAATTTCATC+TGG | - | chr6_2:64894294-64894313 | Msa0923830:CDS | 20.0% |
| !!! | TTTTACTCAAAATTTCATCT+GGG | - | chr6_2:64894295-64894314 | Msa0923830:CDS | 20.0% |
| !! | ATTCATATTGAAAAATCTTC+AGG | - | chr6_2:64894352-64894371 | Msa0923830:CDS | 20.0% |
| !! | TTCTATCAAGATTTGTAATA+TGG | + | chr6_2:64894565-64894584 | None:intergenic | 20.0% |
| !!! | ATTTAATTTATATACACCGA+CGG | - | chr6_2:64894605-64894624 | Msa0923830:CDS | 20.0% |
| !! | TCATGCATTGTAAATATTTA+TGG | - | chr6_2:64894661-64894680 | Msa0923830:CDS | 20.0% |
| !!! | CATTGTAATGTGATTTTATT+GGG | - | chr6_2:64894713-64894732 | Msa0923830:CDS | 20.0% |
| !! | TATCTCCATAAATATTTACA+AGG | + | chr6_2:64894856-64894875 | None:intergenic | 20.0% |
| !! | ATTATAACTAAGTGTATGTT+TGG | - | chr6_2:64895066-64895085 | Msa0923830:intron | 20.0% |
| !! | TAGATGCATTTATATAAAAG+TGG | - | chr6_2:64895165-64895184 | Msa0923830:intron | 20.0% |
| !!! | AGAATTGATTTTAAGATGTT+TGG | + | chr6_2:64895300-64895319 | None:intergenic | 20.0% |
| !! | TAAACAAACTGAATGTTATT+TGG | - | chr6_2:64895496-64895515 | Msa0923830:CDS | 20.0% |
| !!! | AATTGCTTATAATTGCTTTT+TGG | - | chr6_2:64895710-64895729 | Msa0923830:intron | 20.0% |
| !! | TTTATGATGTTTGTTTGATT+TGG | - | chr6_2:64896066-64896085 | Msa0923830:intron | 20.0% |
| !!! | AACATTTTTCAGTTTTGAAA+TGG | - | chr6_2:64896183-64896202 | Msa0923830:intron | 20.0% |
| !! | GAAAAAACAATGGTTATTTA+TGG | - | chr6_2:64896210-64896229 | Msa0923830:intron | 20.0% |
| !! | AAAAACAATGGTTATTTATG+GGG | - | chr6_2:64896212-64896231 | Msa0923830:intron | 20.0% |
| !!! | ATGCCAATTTTATACTTTTT+TGG | - | chr6_2:64896335-64896354 | Msa0923830:intron | 20.0% |
| !!! | TGACCAAAAAAGTATAAAAT+TGG | + | chr6_2:64896341-64896360 | None:intergenic | 20.0% |
| !!! | ATTTTATACTTTTTTGGTCA+TGG | - | chr6_2:64896341-64896360 | Msa0923830:intron | 20.0% |
| !!! | TTCTTTAAAAAAAAGACACA+TGG | + | chr6_2:64897205-64897224 | None:intergenic | 20.0% |
| !! | GTCATAAATCGAAAAAATAA+TGG | + | chr6_2:64897310-64897329 | None:intergenic | 20.0% |
| !! | ATTTGAAAAGATGTTATCAT+TGG | + | chr6_2:64897930-64897949 | None:intergenic | 20.0% |
| !! | AAACAATTATCCTGTTTAAA+TGG | + | chr6_2:64898607-64898626 | None:intergenic | 20.0% |
| !!! | GATAATTGTTTTTCAATCTT+TGG | - | chr6_2:64898616-64898635 | Msa0923830:intron | 20.0% |
| !! | TGTAACTTTAATGATCATTA+TGG | + | chr6_2:64899020-64899039 | None:intergenic | 20.0% |
| !! | CAATTAACTTTCAAGAAAAA+GGG | - | chr6_2:64899553-64899572 | Msa0923830:intron | 20.0% |
| ! | ATATTGAAAAATCTTCAGGT+GGG | - | chr6_2:64894356-64894375 | Msa0923830:CDS | 25.0% |
| ! | TTACAAATCTTGATAGAACA+TGG | - | chr6_2:64894567-64894586 | Msa0923830:CDS | 25.0% |
| !! | GCATTGTAATGTGATTTTAT+TGG | - | chr6_2:64894712-64894731 | Msa0923830:CDS | 25.0% |
| ! | TCATGCCTTGTAAATATTTA+TGG | - | chr6_2:64894848-64894867 | Msa0923830:intron | 25.0% |
| ! | TTTAGGAAGTAACATATAAG+TGG | - | chr6_2:64894877-64894896 | Msa0923830:intron | 25.0% |
| ! | TCGTTAATCAATATACTTTG+AGG | + | chr6_2:64894969-64894988 | None:intergenic | 25.0% |
| !! | AAAGTATATTGATTAACGAG+AGG | - | chr6_2:64894970-64894989 | Msa0923830:intron | 25.0% |
| !!! | AGGATTGTTGTTTATATGAA+GGG | - | chr6_2:64894990-64895009 | Msa0923830:intron | 25.0% |
| !!! | GATTTTGAGTAAATTGATTC+TGG | - | chr6_2:64895108-64895127 | Msa0923830:intron | 25.0% |
| ! | TGGATTTATCAGTGAATTTA+AGG | - | chr6_2:64895185-64895204 | Msa0923830:intron | 25.0% |
| !! | TGAGAGAATTGATTTATGTT+TGG | - | chr6_2:64895452-64895471 | Msa0923830:CDS | 25.0% |
| ! | ACTAAAATAGACATAGCTAA+AGG | - | chr6_2:64895555-64895574 | Msa0923830:intron | 25.0% |
| ! | TAAAGGAGAATTGATAAAGA+AGG | - | chr6_2:64895572-64895591 | Msa0923830:intron | 25.0% |
| ! | TAAAGAAGGAGAATTGATAA+AGG | - | chr6_2:64895586-64895605 | Msa0923830:intron | 25.0% |
| ! | AAAGAAGGAGAATTGATAAA+GGG | - | chr6_2:64895587-64895606 | Msa0923830:intron | 25.0% |
| ! | TATTAGATGTACAACATGTT+TGG | + | chr6_2:64895774-64895793 | None:intergenic | 25.0% |
| !! | AAGAAATACTTTTCGTGATT+TGG | - | chr6_2:64896101-64896120 | Msa0923830:CDS | 25.0% |
| !!! | TTTTCAGTTTTGAAATGGAA+AGG | - | chr6_2:64896188-64896207 | Msa0923830:intron | 25.0% |
| ! | AAATGGAAAGGAAAAAACAA+TGG | - | chr6_2:64896200-64896219 | Msa0923830:intron | 25.0% |
| ! | CGATTAATTAGATGAATCAT+AGG | - | chr6_2:64896254-64896273 | Msa0923830:intron | 25.0% |
| ! | TCAAAAGAAAGCAAAGAATA+AGG | - | chr6_2:64896301-64896320 | Msa0923830:intron | 25.0% |
| !! | TTTTCTATTTCACATGATGA+TGG | - | chr6_2:64896561-64896580 | Msa0923830:CDS | 25.0% |
| ! | TTATGAAGCAAAACAATTGA+AGG | - | chr6_2:64896590-64896609 | Msa0923830:intron | 25.0% |
| !!! | TGAACAGGTTATTTTTAAGA+TGG | - | chr6_2:64897038-64897057 | Msa0923830:CDS | 25.0% |
| ! | AAATGAAGGTTTACAAGATT+CGG | + | chr6_2:64897112-64897131 | None:intergenic | 25.0% |
| !!! | ATATCGAAACTTTGAAATGA+AGG | + | chr6_2:64897126-64897145 | None:intergenic | 25.0% |
| ! | TTGTTGAATGCAATAATACA+TGG | - | chr6_2:64897169-64897188 | Msa0923830:intron | 25.0% |
| ! | AGTAAAAGTCCAATAAATCA+AGG | + | chr6_2:64898060-64898079 | None:intergenic | 25.0% |
| !!! | GTTGAGAGTATTGAAAATAA+TGG | + | chr6_2:64898091-64898110 | None:intergenic | 25.0% |
| ! | CAAGGAAAAAATTACATGTT+CGG | + | chr6_2:64898409-64898428 | None:intergenic | 25.0% |
| ! | TCTCTAATTACATTTGGATT+TGG | + | chr6_2:64898433-64898452 | None:intergenic | 25.0% |
| ! | GGAATTTCTCTAATTACATT+TGG | + | chr6_2:64898439-64898458 | None:intergenic | 25.0% |
| ! | AGAACATTCAGATTTATCAA+AGG | + | chr6_2:64898518-64898537 | None:intergenic | 25.0% |
| ! | TATTGCTCCAAATATTTACA+TGG | - | chr6_2:64898816-64898835 | Msa0923830:intron | 25.0% |
| ! | TATCTCACCATGTAAATATT+TGG | + | chr6_2:64898826-64898845 | None:intergenic | 25.0% |
| !! | AATTTAACTTATGCAACGAA+AGG | + | chr6_2:64898881-64898900 | None:intergenic | 25.0% |
| !! | CAAATGTATGCATATTTTTC+TGG | - | chr6_2:64898919-64898938 | Msa0923830:intron | 25.0% |
| ! | TACTTGAAAGTTGAAATTGT+AGG | - | chr6_2:64898959-64898978 | Msa0923830:intron | 25.0% |
| !! | AATCTAGTCTTTCACATTAT+CGG | - | chr6_2:64898990-64899009 | Msa0923830:intron | 25.0% |
| ! | TCTAGTCTGTGTAAATATTA+TGG | + | chr6_2:64899066-64899085 | None:intergenic | 25.0% |
| ! | ACAGTATCAATATTCCAAAA+TGG | + | chr6_2:64899201-64899220 | None:intergenic | 25.0% |
| ! | TAAGTATTCCAATGAAGTAA+CGG | - | chr6_2:64899317-64899336 | Msa0923830:intron | 25.0% |
| ! | ATTGTTTCATTTGTTTCCAA+TGG | + | chr6_2:64899363-64899382 | None:intergenic | 25.0% |
| ! | TGAGTTTCATCAAATGTAAA+TGG | + | chr6_2:64899393-64899412 | None:intergenic | 25.0% |
| ! | ATTTGATGAAACTCATTTGA+AGG | - | chr6_2:64899398-64899417 | Msa0923830:intron | 25.0% |
| !! | TTCCTAACAATAATCCTTTT+CGG | - | chr6_2:64899421-64899440 | Msa0923830:intron | 25.0% |
| !! | AATAAATTTGGTTCAGAAAG+AGG | - | chr6_2:64899464-64899483 | Msa0923830:intron | 25.0% |
| !! | CCTTTTTCTTGAAAGTTAAT+TGG | + | chr6_2:64899555-64899574 | None:intergenic | 25.0% |
| ! | CCAATTAACTTTCAAGAAAA+AGG | - | chr6_2:64899552-64899571 | Msa0923830:intron | 25.0% |
| ! | AAAGAAATCCAAGAAGAAAA+AGG | - | chr6_2:64899767-64899786 | Msa0923830:CDS | 25.0% |
| ! | AAGAAATCCAAGAAGAAAAA+GGG | - | chr6_2:64899768-64899787 | Msa0923830:CDS | 25.0% |
| ! | ATATGAATTGGTTCAACGTA+AGG | + | chr6_2:64894218-64894237 | None:intergenic | 30.0% |
| CATATTGAAAAATCTTCAGG+TGG | - | chr6_2:64894355-64894374 | Msa0923830:CDS | 30.0% | |
| CATATTCATGGCTTCATAAA+GGG | - | chr6_2:64894387-64894406 | Msa0923830:CDS | 30.0% | |
| ATATTCATGGCTTCATAAAG+GGG | - | chr6_2:64894388-64894407 | Msa0923830:CDS | 30.0% | |
| TGTAAGTAGAAAGTAAGTTG+TGG | - | chr6_2:64894520-64894539 | Msa0923830:CDS | 30.0% | |
| ! | GAACATGGTAGAAAAGTATA+TGG | - | chr6_2:64894582-64894601 | Msa0923830:CDS | 30.0% |
| GTAAAAAAACTTTACACCGT+CGG | + | chr6_2:64894624-64894643 | None:intergenic | 30.0% | |
| TTTAGGAACTAACATACAAG+TGG | - | chr6_2:64894690-64894709 | Msa0923830:CDS | 30.0% | |
| GCATTGTAATGTGATTTGAT+TGG | - | chr6_2:64894899-64894918 | Msa0923830:intron | 30.0% | |
| TTGAGGTTAATTTCTATGCA+CGG | + | chr6_2:64894952-64894971 | None:intergenic | 30.0% | |
| !! | GAGGATTGTTGTTTATATGA+AGG | - | chr6_2:64894989-64895008 | Msa0923830:intron | 30.0% |
| GAATTGATAAAGGGCAATAA+AGG | - | chr6_2:64895596-64895615 | Msa0923830:intron | 30.0% | |
| GGGCAATAAAGGAAAATAAT+AGG | - | chr6_2:64895607-64895626 | Msa0923830:intron | 30.0% | |
| ! | TTTAGCTTATTCGTGTAGTA+TGG | - | chr6_2:64895821-64895840 | Msa0923830:intron | 30.0% |
| ! | AATTAGCTTATGAGCCATAA+CGG | + | chr6_2:64896656-64896675 | None:intergenic | 30.0% |
| TACAACAAACTCAATGTTCT+CGG | + | chr6_2:64896798-64896817 | None:intergenic | 30.0% | |
| CGTATTACAATCCAAAACAA+AGG | + | chr6_2:64897009-64897028 | None:intergenic | 30.0% | |
| ! | TTCGATATGAAACTTTTCAC+AGG | - | chr6_2:64897138-64897157 | Msa0923830:CDS | 30.0% |
| CTAAAACACACATACCTAAA+AGG | + | chr6_2:64897363-64897382 | None:intergenic | 30.0% | |
| ATTCCGATACTTCAAAACTA+GGG | + | chr6_2:64897440-64897459 | None:intergenic | 30.0% | |
| TATTCCGATACTTCAAAACT+AGG | + | chr6_2:64897441-64897460 | None:intergenic | 30.0% | |
| ATATCAAGCAAGTGATTCTT+GGG | + | chr6_2:64897548-64897567 | None:intergenic | 30.0% | |
| TATATCAAGCAAGTGATTCT+TGG | + | chr6_2:64897549-64897568 | None:intergenic | 30.0% | |
| TCTTAGATGACATTCACTAT+TGG | - | chr6_2:64897631-64897650 | Msa0923830:intron | 30.0% | |
| ATAATGACTTCAGGAAACAT+CGG | + | chr6_2:64897727-64897746 | None:intergenic | 30.0% | |
| ! | ATTAGTCTCATAATGACTTC+AGG | + | chr6_2:64897736-64897755 | None:intergenic | 30.0% |
| AGTCCAATAAATCAAGGATA+CGG | + | chr6_2:64898054-64898073 | None:intergenic | 30.0% | |
| !!! | GCTGTTTTTATAAGCTATGA+CGG | - | chr6_2:64898223-64898242 | Msa0923830:intron | 30.0% |
| !!! | CTGTTTTTATAAGCTATGAC+GGG | - | chr6_2:64898224-64898243 | Msa0923830:intron | 30.0% |
| !! | TGTTTTTATAAGCTATGACG+GGG | - | chr6_2:64898225-64898244 | Msa0923830:intron | 30.0% |
| !! | TAAGCACTTTGAGATTGTTT+AGG | + | chr6_2:64898314-64898333 | None:intergenic | 30.0% |
| ! | ATTACATTTGGATTTGGTCA+AGG | + | chr6_2:64898427-64898446 | None:intergenic | 30.0% |
| ATTGCTTTGACTATAGTTGA+GGG | + | chr6_2:64898460-64898479 | None:intergenic | 30.0% | |
| TATTGCTTTGACTATAGTTG+AGG | + | chr6_2:64898461-64898480 | None:intergenic | 30.0% | |
| AAACTTGAATCCATCAACTA+AGG | - | chr6_2:64898489-64898508 | Msa0923830:intron | 30.0% | |
| TTATCCTGTTTAAATGGTGT+AGG | + | chr6_2:64898601-64898620 | None:intergenic | 30.0% | |
| GTCTGTGTAAATATTATGGA+CGG | + | chr6_2:64899062-64899081 | None:intergenic | 30.0% | |
| CAATATTCCAAAATGGTATC+TGG | + | chr6_2:64899194-64899213 | None:intergenic | 30.0% | |
| !! | ATTTAATCCAGTTTCTAGCA+TGG | - | chr6_2:64899232-64899251 | Msa0923830:intron | 30.0% |
| ATCCGAAAAGGATTATTGTT+AGG | + | chr6_2:64899426-64899445 | None:intergenic | 30.0% | |
| !! | CTTTTCTTTGAGAGACTTAT+AGG | + | chr6_2:64899579-64899598 | None:intergenic | 30.0% |
| CTATAAGTCTCTCAAAGAAA+AGG | - | chr6_2:64899577-64899596 | Msa0923830:CDS | 30.0% | |
| TGATGCTTTATGCTTGAATA+TGG | - | chr6_2:64899677-64899696 | Msa0923830:intron | 30.0% | |
| ! | GAAGTGTAAAGTCTAAGATT+AGG | - | chr6_2:64899709-64899728 | Msa0923830:intron | 30.0% |
| !! | AGGAATAGTTCTGATTTGAA+AGG | - | chr6_2:64899729-64899748 | Msa0923830:CDS | 30.0% |
| AGAAATCCAAGAAGAAAAAG+GGG | - | chr6_2:64899769-64899788 | Msa0923830:CDS | 30.0% | |
| !!! | GGTTTTTGTTTCTGGGTTTT+GGG | + | chr6_2:64894148-64894167 | None:intergenic | 35.0% |
| !!! | AGGTTTTTGTTTCTGGGTTT+TGG | + | chr6_2:64894149-64894168 | None:intergenic | 35.0% |
| !! | GTTCGTAGGTTTTTGTTTCT+GGG | + | chr6_2:64894155-64894174 | None:intergenic | 35.0% |
| !! | TGTTCGTAGGTTTTTGTTTC+TGG | + | chr6_2:64894156-64894175 | None:intergenic | 35.0% |
| AAACCTACGAACATTGCAAA+TGG | - | chr6_2:64894163-64894182 | Msa0923830:CDS | 35.0% | |
| AACCTACGAACATTGCAAAT+GGG | - | chr6_2:64894164-64894183 | Msa0923830:CDS | 35.0% | |
| GCGTAGTTCTTGATATGAAT+TGG | + | chr6_2:64894230-64894249 | None:intergenic | 35.0% | |
| ATTCATATCAAGAACTACGC+TGG | - | chr6_2:64894230-64894249 | Msa0923830:CDS | 35.0% | |
| !! | TGGGTATTGATGCATATTCA+TGG | - | chr6_2:64894375-64894394 | Msa0923830:CDS | 35.0% |
| GCATATTCATGGCTTCATAA+AGG | - | chr6_2:64894386-64894405 | Msa0923830:CDS | 35.0% | |
| TATTCATGGCTTCATAAAGG+GGG | - | chr6_2:64894389-64894408 | Msa0923830:CDS | 35.0% | |
| ! | GTCATGTTTCAATTCTAGAG+AGG | + | chr6_2:64895345-64895364 | None:intergenic | 35.0% |
| ATGACTATTACGTGTGTGTT+TGG | - | chr6_2:64895360-64895379 | Msa0923830:intron | 35.0% | |
| ! | AGCTATGATTTGTAGCTTCA+TGG | - | chr6_2:64895685-64895704 | Msa0923830:intron | 35.0% |
| GATGTACAACATGTTTGGTT+TGG | + | chr6_2:64895769-64895788 | None:intergenic | 35.0% | |
| ! | GTCTTGATTCTGATAGTGAA+AGG | - | chr6_2:64895850-64895869 | Msa0923830:intron | 35.0% |
| ! | CTGATAGTGAAAGGAAATTG+CGG | - | chr6_2:64895859-64895878 | Msa0923830:intron | 35.0% |
| !!! | ACACCAGTTGTTGTTTTTGA+TGG | - | chr6_2:64895933-64895952 | Msa0923830:CDS | 35.0% |
| !! | TACTTTTCGTGATTTGGCAA+TGG | - | chr6_2:64896107-64896126 | Msa0923830:CDS | 35.0% |
| AGTGAATATTACTCCCGTTA+TGG | - | chr6_2:64896639-64896658 | Msa0923830:intron | 35.0% | |
| ! | ATTAGCTTATGAGCCATAAC+GGG | + | chr6_2:64896655-64896674 | None:intergenic | 35.0% |
| TATGGCTCATAAGCTAATTC+AGG | - | chr6_2:64896657-64896676 | Msa0923830:intron | 35.0% | |
| TCTGCAACACAATTATACGA+AGG | + | chr6_2:64896766-64896785 | None:intergenic | 35.0% | |
| TCCAACCTTGAAACTGAAAA+AGG | - | chr6_2:64896854-64896873 | Msa0923830:CDS | 35.0% | |
| AACCTTGAAACTGAAAAAGG+CGG | - | chr6_2:64896857-64896876 | Msa0923830:CDS | 35.0% | |
| GATAGTGATCTGTTAACGTA+TGG | - | chr6_2:64896902-64896921 | Msa0923830:CDS | 35.0% | |
| ATCCAAAACAAAGGACTTCT+CGG | + | chr6_2:64897000-64897019 | None:intergenic | 35.0% | |
| !!! | AATACGCAGTTGTTTTGAAC+AGG | - | chr6_2:64897023-64897042 | Msa0923830:intron | 35.0% |
| !!! | ATTTTTAAGATGGACCGTGA+CGG | - | chr6_2:64897048-64897067 | Msa0923830:CDS | 35.0% |
| CGAAAGAATAGAGTTAGAGA+AGG | - | chr6_2:64897077-64897096 | Msa0923830:CDS | 35.0% | |
| TGAACAAGCTGAAAGAAACT+AGG | - | chr6_2:64897278-64897297 | Msa0923830:intron | 35.0% | |
| !!! | TTAGGTATGTGTGTTTTAGC+TGG | - | chr6_2:64897364-64897383 | Msa0923830:intron | 35.0% |
| !!! | ATGCCCTAGTTTTGAAGTAT+CGG | - | chr6_2:64897434-64897453 | Msa0923830:intron | 35.0% |
| TATCAAGCAAGTGATTCTTG+GGG | + | chr6_2:64897547-64897566 | None:intergenic | 35.0% | |
| TCTGTTCTTAAGCTTGAGAA+AGG | - | chr6_2:64897782-64897801 | Msa0923830:intron | 35.0% | |
| AAGGATTTGGCATAATCTTC+GGG | + | chr6_2:64897818-64897837 | None:intergenic | 35.0% | |
| GAAGGATTTGGCATAATCTT+CGG | + | chr6_2:64897819-64897838 | None:intergenic | 35.0% | |
| AGATTATGCCAAATCCTTCA+AGG | - | chr6_2:64897820-64897839 | Msa0923830:CDS | 35.0% | |
| AGTGACTCAAGAAAACTTTC+CGG | + | chr6_2:64898006-64898025 | None:intergenic | 35.0% | |
| !!! | TGACGAAGACCTCAATTTTT+TGG | - | chr6_2:64898026-64898045 | Msa0923830:CDS | 35.0% |
| !!! | GACGAAGACCTCAATTTTTT+GGG | - | chr6_2:64898027-64898046 | Msa0923830:CDS | 35.0% |
| !!! | ACGAAGACCTCAATTTTTTG+GGG | - | chr6_2:64898028-64898047 | Msa0923830:CDS | 35.0% |
| ATCACTTAAACGGTGTTTGA+TGG | + | chr6_2:64898138-64898157 | None:intergenic | 35.0% | |
| ATAGTCAAAGCAATAGCTGA+AGG | - | chr6_2:64898466-64898485 | Msa0923830:intron | 35.0% | |
| AGTTCCTACACCATTTAAAC+AGG | - | chr6_2:64898594-64898613 | Msa0923830:intron | 35.0% | |
| GGTGAGATATGATTGAATCT+CGG | - | chr6_2:64898837-64898856 | Msa0923830:intron | 35.0% | |
| ! | TTCGATTCCAGATACCATTT+TGG | - | chr6_2:64899184-64899203 | Msa0923830:intron | 35.0% |
| ATATTGATACTGTGCGAACT+AGG | - | chr6_2:64899208-64899227 | Msa0923830:intron | 35.0% | |
| ACATATACCATGCTAGAAAC+TGG | + | chr6_2:64899242-64899261 | None:intergenic | 35.0% | |
| ! | TCGTGTTTTCTTATCCGAAA+AGG | + | chr6_2:64899438-64899457 | None:intergenic | 35.0% |
| ! | TTTTCGGATAAGAAAACACG+AGG | - | chr6_2:64899437-64899456 | Msa0923830:intron | 35.0% |
| ACACGAGGAGGAAATAAATT+TGG | - | chr6_2:64899452-64899471 | Msa0923830:intron | 35.0% | |
| ! | AGTTCTGATTTGAAAGGAAG+TGG | - | chr6_2:64899735-64899754 | Msa0923830:CDS | 35.0% |
| TTCCCATTTGCAATGTTCGT+AGG | + | chr6_2:64894169-64894188 | None:intergenic | 40.0% | |
| AGAGGCAAAAGTGATTCTAG+AGG | + | chr6_2:64895327-64895346 | None:intergenic | 40.0% | |
| TGCATAGAGTGAATCTGCTT+CGG | - | chr6_2:64895898-64895917 | Msa0923830:intron | 40.0% | |
| CCACCATCAAAAACAACAAC+TGG | + | chr6_2:64895939-64895958 | None:intergenic | 40.0% | |
| !!! | CCAGTTGTTGTTTTTGATGG+TGG | - | chr6_2:64895936-64895955 | Msa0923830:CDS | 40.0% |
| CAATGGCTAAGCTCAAAGAA+GGG | - | chr6_2:64896124-64896143 | Msa0923830:CDS | 40.0% | |
| !! | GCTGTTTTCATAAACTGTCC+TGG | - | chr6_2:64896464-64896483 | Msa0923830:intron | 40.0% |
| CTGCTCTCTACACAGAAATA+TGG | + | chr6_2:64896621-64896640 | None:intergenic | 40.0% | |
| AACTGAGCATCTGCTTCATA+TGG | + | chr6_2:64896824-64896843 | None:intergenic | 40.0% | |
| !!! | GCCTTTTTCAGTTTCAAGGT+TGG | + | chr6_2:64896858-64896877 | None:intergenic | 40.0% |
| TTTGGAGAAGTTCTTACAGC+TGG | + | chr6_2:64896932-64896951 | None:intergenic | 40.0% | |
| ! | GACGCACAAGATCATAGTTT+TGG | + | chr6_2:64896950-64896969 | None:intergenic | 40.0% |
| AGGACTTCTCGGAAATTGAA+AGG | + | chr6_2:64896989-64897008 | None:intergenic | 40.0% | |
| !! | TTCCGAGAAGTCCTTTGTTT+TGG | - | chr6_2:64896995-64897014 | Msa0923830:intron | 40.0% |
| !!! | TTTTTAAGATGGACCGTGAC+GGG | - | chr6_2:64897049-64897068 | Msa0923830:CDS | 40.0% |
| ! | TCAGCTTGTTCATCATCTCA+AGG | + | chr6_2:64897270-64897289 | None:intergenic | 40.0% |
| ACACATACCTAAAAGGAGAG+GGG | + | chr6_2:64897356-64897375 | None:intergenic | 40.0% | |
| CACACATACCTAAAAGGAGA+GGG | + | chr6_2:64897357-64897376 | None:intergenic | 40.0% | |
| ACACACATACCTAAAAGGAG+AGG | + | chr6_2:64897358-64897377 | None:intergenic | 40.0% | |
| ! | GATTTTCTTCCATCTGTTCC+TGG | - | chr6_2:64897391-64897410 | Msa0923830:intron | 40.0% |
| ATCGATCGTGTAAGTACTTG+TGG | - | chr6_2:64897460-64897479 | Msa0923830:intron | 40.0% | |
| AAGTGCATCCTTGAAGGATT+TGG | + | chr6_2:64897831-64897850 | None:intergenic | 40.0% | |
| TCAAGAAAACTTTCCGGAAG+AGG | + | chr6_2:64898000-64898019 | None:intergenic | 40.0% | |
| TGGATGCAACAAATGCAGAA+TGG | + | chr6_2:64898118-64898137 | None:intergenic | 40.0% | |
| TCAAAGGCTTCCTTAGTTGA+TGG | + | chr6_2:64898502-64898521 | None:intergenic | 40.0% | |
| !! | ACTTTTCCTGAGTTGACCAA+TGG | + | chr6_2:64898572-64898591 | None:intergenic | 40.0% |
| TCTCTTTATCTGCAGTGACA+AGG | - | chr6_2:64899280-64899299 | Msa0923830:intron | 40.0% | |
| TCAGAAACTGATCATGCCAT+TGG | - | chr6_2:64899344-64899363 | Msa0923830:intron | 40.0% | |
| GGTTCAGAAAGAGGAAACAA+TGG | - | chr6_2:64899473-64899492 | Msa0923830:intron | 40.0% | |
| AGTAGAAGTCACTGATGAAC+AGG | - | chr6_2:64899626-64899645 | Msa0923830:intron | 40.0% | |
| TGCTTGAATATGGAGTCACA+AGG | - | chr6_2:64899687-64899706 | Msa0923830:intron | 40.0% | |
| ! | TCTGATTTGAAAGGAAGTGG+TGG | - | chr6_2:64899738-64899757 | Msa0923830:CDS | 40.0% |
| ! | GTTACTCCCCTTTTTCTTCT+TGG | + | chr6_2:64899778-64899797 | None:intergenic | 40.0% |
| !! | TTCTCAGTTGCTGCTTTGCA+AGG | + | chr6_2:64895969-64895988 | None:intergenic | 45.0% |
| AAGCAGCAACTGAGAAAGAG+AGG | - | chr6_2:64895973-64895992 | Msa0923830:CDS | 45.0% | |
| GCAATGGCTAAGCTCAAAGA+AGG | - | chr6_2:64896123-64896142 | Msa0923830:CDS | 45.0% | |
| ! | TGCTGCTTCAGAACTCTTTC+AGG | - | chr6_2:64896155-64896174 | Msa0923830:CDS | 45.0% |
| AAACTGTCCTGGAGAGCTTA+TGG | - | chr6_2:64896475-64896494 | Msa0923830:intron | 45.0% | |
| !!! | TGCCGCCTTTTTCAGTTTCA+AGG | + | chr6_2:64896862-64896881 | None:intergenic | 45.0% |
| AACTATGATCTTGTGCGTCG+AGG | - | chr6_2:64896951-64896970 | Msa0923830:intron | 45.0% | |
| ! | TTTTTCCCCCCTCTCCTTTT+AGG | - | chr6_2:64897346-64897365 | Msa0923830:intron | 45.0% |
| ACATACCTAAAAGGAGAGGG+GGG | + | chr6_2:64897354-64897373 | None:intergenic | 45.0% | |
| CACATACCTAAAAGGAGAGG+GGG | + | chr6_2:64897355-64897374 | None:intergenic | 45.0% | |
| CTTCCATCTGTTCCTGGAAT+TGG | - | chr6_2:64897397-64897416 | Msa0923830:intron | 45.0% | |
| ACACCAATTCCAGGAACAGA+TGG | + | chr6_2:64897403-64897422 | None:intergenic | 45.0% | |
| AGCAAGTGATTCTTGGGGAT+AGG | + | chr6_2:64897542-64897561 | None:intergenic | 45.0% | |
| AACAGCAAGTGCATCCTTGA+AGG | + | chr6_2:64897837-64897856 | None:intergenic | 45.0% | |
| CTTCATGTGCTTGAGCTCTT+TGG | + | chr6_2:64897977-64897996 | None:intergenic | 45.0% | |
| GATACGGCCCCAAAAAATTG+AGG | + | chr6_2:64898038-64898057 | None:intergenic | 45.0% | |
| GGGCCGTATCCTTGATTTAT+TGG | - | chr6_2:64898048-64898067 | Msa0923830:CDS | 45.0% | |
| GCAACAAATGCAGAATGGAG+AGG | + | chr6_2:64898113-64898132 | None:intergenic | 45.0% | |
| CAATGGTATGGGGATCAATG+GGG | + | chr6_2:64898555-64898574 | None:intergenic | 45.0% | |
| CCAATGGTATGGGGATCAAT+GGG | + | chr6_2:64898556-64898575 | None:intergenic | 45.0% | |
| ACCAATGGTATGGGGATCAA+TGG | + | chr6_2:64898557-64898576 | None:intergenic | 45.0% | |
| ! | CTGAGTTGACCAATGGTATG+GGG | + | chr6_2:64898565-64898584 | None:intergenic | 45.0% |
| ! | CCTGAGTTGACCAATGGTAT+GGG | + | chr6_2:64898566-64898585 | None:intergenic | 45.0% |
| ! | TCCTGAGTTGACCAATGGTA+TGG | + | chr6_2:64898567-64898586 | None:intergenic | 45.0% |
| !! | CTGAAGTGCCGTTACTTCAT+TGG | + | chr6_2:64899328-64899347 | None:intergenic | 45.0% |
| TCGGATAAGAAAACACGAGG+AGG | - | chr6_2:64899440-64899459 | Msa0923830:intron | 45.0% | |
| GTCACTGATGAACAGGTTTC+AGG | - | chr6_2:64899633-64899652 | Msa0923830:intron | 45.0% | |
| !!! | TTTATTTATTTTAAGTTTTA+AGG | - | chr6_2:64896008-64896027 | Msa0923830:intron | 5.0% |
| GACATGTCCATAAGCTCTCC+AGG | + | chr6_2:64896485-64896504 | None:intergenic | 50.0% | |
| TTCTTTCGCCATTCCCGTCA+CGG | + | chr6_2:64897065-64897084 | None:intergenic | 50.0% | |
| CACGTTGTGCACACACTACA+CGG | - | chr6_2:64897600-64897619 | Msa0923830:intron | 50.0% | |
| CAAGCACATGAAGCCTCTTC+CGG | - | chr6_2:64897984-64898003 | Msa0923830:CDS | 50.0% | |
| TGGGGATCAATGGGGTGTAA+AGG | + | chr6_2:64898547-64898566 | None:intergenic | 50.0% | |
| CCCATTGATCCCCATACCAT+TGG | - | chr6_2:64898553-64898572 | Msa0923830:intron | 50.0% | |
| CCCATACCATTGGTCAACTC+AGG | - | chr6_2:64898563-64898582 | Msa0923830:intron | 50.0% | |
| GGTTTCAGGAGTGACTGAAG+TGG | - | chr6_2:64899647-64899666 | Msa0923830:intron | 50.0% | |
| ! | AAGATGGACCGTGACGGGAA+TGG | - | chr6_2:64897054-64897073 | Msa0923830:CDS | 55.0% |
| GCTCGAGCAACACCAATTCC+AGG | + | chr6_2:64897412-64897431 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 64894139 | 64899833 | 64894139 | ID=Msa0923830;Name=Msa0923830 |
| chr6_2 | mRNA | 64894139 | 64899833 | 64894139 | ID=Msa0923830-mRNA-1;Parent=Msa0923830;Name=Msa0923830-mRNA-1;_AED=0.10;_eAED=0.10;_QI=43|0.81|0.75|1|1|1|12|0|579 |
| chr6_2 | exon | 64894139 | 64894777 | 64894139 | ID=Msa0923830-mRNA-1:exon:10201;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64895378 | 64895522 | 64895378 | ID=Msa0923830-mRNA-1:exon:10200;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64895920 | 64896012 | 64895920 | ID=Msa0923830-mRNA-1:exon:10199;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64896099 | 64896196 | 64896099 | ID=Msa0923830-mRNA-1:exon:10198;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64896504 | 64896589 | 64896504 | ID=Msa0923830-mRNA-1:exon:10197;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64896813 | 64896927 | 64896813 | ID=Msa0923830-mRNA-1:exon:10196;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64897038 | 64897187 | 64897038 | ID=Msa0923830-mRNA-1:exon:10195;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64897294 | 64897338 | 64897294 | ID=Msa0923830-mRNA-1:exon:10194;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64897796 | 64897874 | 64897796 | ID=Msa0923830-mRNA-1:exon:10193;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64897972 | 64898146 | 64897972 | ID=Msa0923830-mRNA-1:exon:10192;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64899562 | 64899598 | 64899562 | ID=Msa0923830-mRNA-1:exon:10191;Parent=Msa0923830-mRNA-1 |
| chr6_2 | exon | 64899713 | 64899833 | 64899713 | ID=Msa0923830-mRNA-1:exon:10190;Parent=Msa0923830-mRNA-1 |
| chr6_2 | five_prime_UTR | 64899791 | 64899833 | 64899791 | ID=Msa0923830-mRNA-1:five_prime_utr;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64899713 | 64899790 | 64899713 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64899562 | 64899598 | 64899562 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64897972 | 64898146 | 64897972 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64897796 | 64897874 | 64897796 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64897294 | 64897338 | 64897294 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64897038 | 64897187 | 64897038 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64896813 | 64896927 | 64896813 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64896504 | 64896589 | 64896504 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64896099 | 64896196 | 64896099 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64895920 | 64896012 | 64895920 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64895378 | 64895522 | 64895378 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| chr6_2 | CDS | 64894139 | 64894777 | 64894139 | ID=Msa0923830-mRNA-1:cds;Parent=Msa0923830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
