AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0153210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0153210 MtrunA17_Chr1g0162841 95.641 390 17 0 1 390 1 390 0.0 769
Msa0153210 MtrunA17_Chr3g0113931 34.028 144 94 1 72 215 15 157 3.16e-24 104
Msa0153210 MtrunA17_Chr4g0040351 27.517 149 102 2 57 205 1 143 7.33e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0153210 AT2G33560.2 55.087 403 158 6 2 390 3 396 4.03e-150 430
Msa0153210 AT2G33560.1 55.224 402 158 7 2 390 3 395 1.38e-149 429
Msa0153210 AT5G05510.1 33.571 140 92 1 72 211 19 157 1.85e-21 96.3
Msa0153210 AT2G20635.1 38.519 135 82 1 79 212 11 145 1.64e-19 90.5

Find 112 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTCATGTAACAATTTA+TGG 0.081181 1_4:+16419667 Msa0153210:three_prime_UTR
TGCAAAATGGAAATCCTTTA+AGG 0.118247 1_4:+16418711 Msa0153210:CDS
AGCATTTGAATCTTTATAAA+TGG 0.182533 1_4:-16418593 None:intergenic
GGCGAAAATCAGCACCTTAA+AGG 0.243628 1_4:-16418725 None:intergenic
TCCCACAGCGAACTGGAATT+AGG 0.287201 1_4:+16418859 Msa0153210:CDS
CGTGTTCCAACTATGAATTT+TGG 0.294547 1_4:-16415797 None:intergenic
ACAATGCAATTCCTGCAAAA+TGG 0.312255 1_4:+16418698 Msa0153210:CDS
TTGGCATTCGGAACGGTATA+AGG 0.315818 1_4:+16417209 Msa0153210:CDS
CATTTCATGTAACAATTTAT+GGG 0.315985 1_4:+16419668 Msa0153210:three_prime_UTR
AGCAATGTGTCCGTGCATTT+TGG 0.329337 1_4:+16417190 Msa0153210:CDS
AAACACATGTGTAGCTTTCC+AGG 0.334465 1_4:-16419701 None:intergenic
GAGGACTTACCCTCTGCTTT+CGG 0.357727 1_4:-16419389 None:intergenic
ATAATCAGTTTGTACTTGTA+TGG 0.359054 1_4:+16419780 Msa0153210:three_prime_UTR
CCCACAGCGAACTGGAATTA+GGG 0.370316 1_4:+16418860 Msa0153210:CDS
CTTCTCGCCAAGGGAGATAA+TGG 0.383418 1_4:+16418111 Msa0153210:CDS
GGCAGAAAATTGCTTTGATA+AGG 0.384613 1_4:+16417371 Msa0153210:intron
AGATTTCTTGAGGTAATTAT+CGG 0.385309 1_4:-16416009 None:intergenic
GAGGCACCTGTGCGTAGCTT+TGG 0.395057 1_4:+16418084 Msa0153210:CDS
CAGAACCATTACTGTTCAAT+GGG 0.401858 1_4:-16418227 None:intergenic
TTGCCTAGTCTTCAAATTTG+AGG 0.403651 1_4:-16419408 None:intergenic
TTCTTTGAAAGTTTCCCATT+CGG 0.413014 1_4:-16415922 None:intergenic
AGCATATGAAATGTAGAAAT+CGG 0.414170 1_4:-16417442 None:intergenic
GCAGAACCATTACTGTTCAA+TGG 0.418471 1_4:-16418228 None:intergenic
CAGAAAGATTACTGCTCAAA+GGG 0.419258 1_4:-16418263 None:intergenic
ATCTTTCTGTTAAGAATGAT+AGG 0.426195 1_4:+16418277 Msa0153210:CDS
GCTCTTCCAAAATTCATAGT+TGG 0.438635 1_4:+16415791 Msa0153210:five_prime_UTR
ATCCAGACCCGTCACACTCT+TGG 0.440039 1_4:+16418638 Msa0153210:CDS
CATTTCATATGCTTCGCACT+TGG 0.440560 1_4:+16417452 Msa0153210:CDS
CTATGCCAAGTTCAAATGTC+TGG 0.447120 1_4:-16417503 None:intergenic
CGGGTCTGGATGAGGTGGGC+AGG 0.447626 1_4:-16418626 None:intergenic
AATGCTAGAAACTCTGTCTC+TGG 0.451174 1_4:-16415882 None:intergenic
CCTCCAGGTGGAGATAGCTC+AGG 0.451234 1_4:+16417150 Msa0153210:CDS
AGCCAAGAGTGTGACGGGTC+TGG 0.456101 1_4:-16418640 None:intergenic
ATCTGGGGAGGCTGCTATGC+GGG 0.457917 1_4:-16419599 None:intergenic
GACTAGGCAAGACGACGAAA+AGG 0.475024 1_4:+16419421 Msa0153210:CDS
CTAGCATTGAAGAGAGAAAC+GGG 0.485326 1_4:+16415897 Msa0153210:CDS
TTTCAGGTCCCACAGCGAAC+TGG 0.488532 1_4:+16418852 Msa0153210:intron
TCTAGCATTGAAGAGAGAAA+CGG 0.489301 1_4:+16415896 Msa0153210:CDS
CACTCTTGGCTCAAACTTGG+TGG 0.494308 1_4:+16418652 Msa0153210:CDS
GAAGAGAAACCGAGTTACTA+AGG 0.496845 1_4:+16419556 Msa0153210:intron
AGGTGGAGATAGCTCAGGGC+TGG 0.499562 1_4:+16417155 Msa0153210:CDS
TCACACTCTTGGCTCAAACT+TGG 0.500855 1_4:+16418649 Msa0153210:CDS
GGTTGAGAATGTTAACGTTA+CGG 0.502066 1_4:-16415968 None:intergenic
GCGAAGATCCTCTTCTCCCT+TGG 0.503308 1_4:+16416167 Msa0153210:CDS
AGTCCTCAAATTTGAAGACT+AGG 0.504667 1_4:+16419405 Msa0153210:CDS
GAATCTTTATAAATGGAAAG+TGG 0.506850 1_4:-16418586 None:intergenic
CCCTAATTCCAGTTCGCTGT+GGG 0.510029 1_4:-16418860 None:intergenic
ACGACGAAAAGGACTTCAAA+AGG 0.511321 1_4:+16419432 Msa0153210:CDS
TGATAGCATGTTGCTGCAAA+GGG 0.512872 1_4:-16419647 None:intergenic
CTATGCGGGAAGTTGCGTAA+TGG 0.514966 1_4:-16419585 None:intergenic
ATTACTGCTCAAAGGGGCCA+AGG 0.521220 1_4:-16418256 None:intergenic
TTGTGTTGTAGGTGCGCCCT+TGG 0.521457 1_4:+16418203 Msa0153210:intron
GAGAGAAACGGGAACCGAAT+GGG 0.521715 1_4:+16415908 Msa0153210:CDS
GACCTAACCATTATCTCCCT+TGG 0.523632 1_4:-16418118 None:intergenic
CACTCTAACCAAGGGAGAAG+AGG 0.525625 1_4:-16416175 None:intergenic
TTGGCCCCATTGAACAGTAA+TGG 0.526038 1_4:+16418222 Msa0153210:CDS
TGGATCCTTCCTTAGTAACT+CGG 0.526271 1_4:-16419565 None:intergenic
ACAGAAAGATTACTGCTCAA+AGG 0.527970 1_4:-16418264 None:intergenic
GTTCAAGAAGCGTTTCCTCC+AGG 0.530661 1_4:+16417135 Msa0153210:CDS
AACGTGAGACCTTTGAAAAG+AGG 0.533683 1_4:+16415945 Msa0153210:CDS
ATCAACAAACACCGGGATGC+AGG 0.534208 1_4:-16418904 None:intergenic
TAATGGTTCTGCTAAGCCCT+TGG 0.541098 1_4:+16418239 Msa0153210:CDS
GTTTGAGCCAAGAGTGTGAC+GGG 0.542618 1_4:-16418645 None:intergenic
GCTAACCAGACATTTGAACT+TGG 0.546783 1_4:+16417498 Msa0153210:CDS
TTTGGAACTCTTCTCGCCAA+GGG 0.546864 1_4:+16418102 Msa0153210:CDS
GAGTGTGACGGGTCTGGATG+AGG 0.550155 1_4:-16418634 None:intergenic
ATTACTGTTCAATGGGGCCA+AGG 0.550814 1_4:-16418220 None:intergenic
CTCCAGGTGGAGATAGCTCA+GGG 0.552572 1_4:+16417151 Msa0153210:CDS
GTTGAATAAGAGATTTCTTG+AGG 0.555118 1_4:-16416019 None:intergenic
CATTTGAACTTGGCATAGCT+AGG 0.559506 1_4:+16417508 Msa0153210:CDS
AGAAACCGAGTTACTAAGGA+AGG 0.560277 1_4:+16419560 Msa0153210:CDS
TTCTTGTACGCTCAATGTCA+AGG 0.562298 1_4:+16417923 Msa0153210:CDS
TGGAGATAGCTCAGGGCTGG+TGG 0.563908 1_4:+16417158 Msa0153210:CDS
TGTGACGGGTCTGGATGAGG+TGG 0.564742 1_4:-16418631 None:intergenic
GGAATTAGGGCTACAGTGGT+TGG 0.569381 1_4:+16418873 Msa0153210:CDS
CTTTGGAACTCTTCTCGCCA+AGG 0.569504 1_4:+16418101 Msa0153210:CDS
CATTCTTCATCAACAAACAC+CGG 0.569992 1_4:-16418912 None:intergenic
ATGATAGCATGTTGCTGCAA+AGG 0.571911 1_4:-16419648 None:intergenic
TGGTGCAAGTGCCTGCATCC+CGG 0.572563 1_4:+16418893 Msa0153210:CDS
CGGTGTGACACTTGAGAGCA+TGG 0.576550 1_4:-16415989 None:intergenic
ATGAATACTCACTCTAACCA+AGG 0.581627 1_4:-16416184 None:intergenic
AATCTCTTATTCAACAGCGA+AGG 0.583146 1_4:+16416027 Msa0153210:CDS
GCCCTAATTCCAGTTCGCTG+TGG 0.587920 1_4:-16418861 None:intergenic
AACACATGTGTAGCTTTCCA+GGG 0.588893 1_4:-16419700 None:intergenic
TATAAAGATTCAAATGCTAG+TGG 0.592975 1_4:+16418598 Msa0153210:CDS
AGAGAGAAACGGGAACCGAA+TGG 0.595749 1_4:+16415907 Msa0153210:CDS
AGAGTTCCAAAGCTACGCAC+AGG 0.601818 1_4:-16418090 None:intergenic
AGCCCTGAGCTATCTCCACC+TGG 0.603020 1_4:-16417153 None:intergenic
GTTCCGAATGCCAAAATGCA+CGG 0.610220 1_4:-16417200 None:intergenic
GATGGTGAAGGTGTATGAAG+TGG 0.612717 1_4:+16417112 Msa0153210:intron
TTTGTTGATGAAGAATGTCA+AGG 0.612992 1_4:+16418918 Msa0153210:CDS
TTCATTAAATCCGAAAGCAG+AGG 0.613152 1_4:+16419379 Msa0153210:CDS
TTACTGCTCAAAGGGGCCAA+GGG 0.614551 1_4:-16418255 None:intergenic
GTGACGGGTCTGGATGAGGT+GGG 0.615219 1_4:-16418630 None:intergenic
TGGTCGTGCCGAAAGAAACA+AGG 0.616341 1_4:+16418672 Msa0153210:CDS
TTACTGTTCAATGGGGCCAA+GGG 0.617013 1_4:-16418219 None:intergenic
TCATTAAATCCGAAAGCAGA+GGG 0.617997 1_4:+16419380 Msa0153210:CDS
ATGGTGAAGGTGTATGAAGT+GGG 0.619853 1_4:+16417113 Msa0153210:intron
CAAGAAGCGTTTCCTCCAGG+TGG 0.638066 1_4:+16417138 Msa0153210:CDS
AGATAATTAAAACTTCTGAA+AGG 0.639773 1_4:+16419618 Msa0153210:exon
TGAATACTCACTCTAACCAA+GGG 0.640887 1_4:-16416183 None:intergenic
AGCTTCAGCAACAACAACAA+TGG 0.642912 1_4:+16415833 Msa0153210:exon
AACTGGAATTAGGGCTACAG+TGG 0.642915 1_4:+16418869 Msa0153210:CDS
GAAGCGATTGATGATTACAA+AGG 0.660086 1_4:+16416145 Msa0153210:CDS
TTGTTGATGAAGAATGTCAA+GGG 0.663241 1_4:+16418919 Msa0153210:CDS
ATTTGCGATATCTCAAAGTG+TGG 0.664209 1_4:+16417235 Msa0153210:CDS
ATTCTTCATCAACAAACACC+GGG 0.674711 1_4:-16418911 None:intergenic
AGAAAGATTACTGCTCAAAG+GGG 0.678568 1_4:-16418262 None:intergenic
AGTTTGAGCCAAGAGTGTGA+CGG 0.680288 1_4:-16418646 None:intergenic
TATCTGGGGAGGCTGCTATG+CGG 0.695957 1_4:-16419600 None:intergenic
CCTGAGCTATCTCCACCTGG+AGG 0.737732 1_4:-16417150 None:intergenic
AGAACCATTACTGTTCAATG+GGG 0.751717 1_4:-16418226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTTCAGTTAAAAAATT+AGG + chr1_4:16416481-16416500 Msa0153210:intron 10.0%
!!! AAAAAGCTTAAAATTAATTT+TGG + chr1_4:16416512-16416531 Msa0153210:intron 10.0%
!!! ATTTTCTATTTTTTTATTGA+TGG + chr1_4:16417094-16417113 Msa0153210:intron 10.0%
!! GTATTATATTCAAATAAAAA+TGG - chr1_4:16419265-16419284 None:intergenic 10.0%
!!! TTATAGCCTTTTTAATTTTA+GGG + chr1_4:16416253-16416272 Msa0153210:intron 15.0%
!! AAATAACCCTAAAATTAAAA+AGG - chr1_4:16416262-16416281 None:intergenic 15.0%
!!! TTTAATTTTAGGGTTATTTT+AGG + chr1_4:16416263-16416282 Msa0153210:intron 15.0%
!!! TGATATGATTTTGAATTTTT+AGG + chr1_4:16416311-16416330 Msa0153210:intron 15.0%
!!! TGATTATGTAAAATTGATTT+TGG + chr1_4:16416800-16416819 Msa0153210:intron 15.0%
!!! TTTCATTTTTGCATTAATTA+TGG + chr1_4:16417659-16417678 Msa0153210:intron 15.0%
!!! ATATTATAAAATTTTGGAAG+AGG - chr1_4:16417986-16418005 None:intergenic 15.0%
!! TTTGAAAAATGAAGTATATA+TGG - chr1_4:16418390-16418409 None:intergenic 15.0%
!!! TTTTCATTATTAAATCTTGT+AGG + chr1_4:16418551-16418570 Msa0153210:intron 15.0%
!!! ATATTTTAAACCCATTTTTA+AGG - chr1_4:16419169-16419188 None:intergenic 15.0%
!! TTATATTCAAATAAAAATGG+CGG - chr1_4:16419262-16419281 None:intergenic 15.0%
!! ATAAAATGATGTATATGTTT+AGG - chr1_4:16419510-16419529 None:intergenic 15.0%
!!! CATTTAAATTGATGAGTTTT+TGG + chr1_4:16416104-16416123 Msa0153210:intron 20.0%
!!! GTTATAGCCTTTTTAATTTT+AGG + chr1_4:16416252-16416271 Msa0153210:intron 20.0%
!!! TTTTAGGATATTGTTGATTT+AGG + chr1_4:16416279-16416298 Msa0153210:intron 20.0%
!!! AAGCTTAAAATTAATTTTGG+AGG + chr1_4:16416515-16416534 Msa0153210:intron 20.0%
!!! CAATTTTACACAATCAATTA+TGG + chr1_4:16416584-16416603 Msa0153210:intron 20.0%
!!! AGAGTAAAATGTTTTATGTT+TGG + chr1_4:16416837-16416856 Msa0153210:intron 20.0%
!! CTATTATAAATCAAATCTAG+AGG + chr1_4:16416900-16416919 Msa0153210:intron 20.0%
!! TGTTATTATAAACCTATGTT+TGG - chr1_4:16417060-16417079 None:intergenic 20.0%
!!! TATTTTTTTATTGATGGTGA+AGG + chr1_4:16417100-16417119 Msa0153210:intron 20.0%
!! AATTAACAGTTAACAAACAA+AGG - chr1_4:16417285-16417304 None:intergenic 20.0%
!!! GGAAGTTATATATTCTTTTT+TGG + chr1_4:16417392-16417411 Msa0153210:CDS 20.0%
!! AAGATAAGAATTTCATTACA+AGG - chr1_4:16417563-16417582 None:intergenic 20.0%
!! GGTTTCAATTTATACAAATT+TGG + chr1_4:16417721-16417740 Msa0153210:intron 20.0%
!! CAATTTATACAAATTTGGAA+AGG + chr1_4:16417726-16417745 Msa0153210:intron 20.0%
!!! CTAAATATTCTATTTTGCTA+TGG + chr1_4:16417841-16417860 Msa0153210:intron 20.0%
!! ATGAAGTATATATGGAAATA+AGG - chr1_4:16418382-16418401 None:intergenic 20.0%
!! TATATGAATAATGAGTTTCT+AGG + chr1_4:16418448-16418467 Msa0153210:intron 20.0%
!! AGCATTTGAATCTTTATAAA+TGG - chr1_4:16418596-16418615 None:intergenic 20.0%
!!! TTCAGAAGTTTTAATTATCT+GGG - chr1_4:16419618-16419637 None:intergenic 20.0%
!!! TTTCAGAAGTTTTAATTATC+TGG - chr1_4:16419619-16419638 None:intergenic 20.0%
!! AGATAATTAAAACTTCTGAA+AGG + chr1_4:16419618-16419637 Msa0153210:exon 20.0%
!! TCATTTCATGTAACAATTTA+TGG + chr1_4:16419667-16419686 Msa0153210:three_prime_UTR 20.0%
!! CATTTCATGTAACAATTTAT+GGG + chr1_4:16419668-16419687 Msa0153210:three_prime_UTR 20.0%
! AGATTTCTTGAGGTAATTAT+CGG - chr1_4:16416012-16416031 None:intergenic 25.0%
!!! ATATTGTTGATTTAGGAGAT+TGG + chr1_4:16416286-16416305 Msa0153210:intron 25.0%
! AAAGCAAGTGAAATGTAAAA+TGG + chr1_4:16416418-16416437 Msa0153210:intron 25.0%
! AATGTAAAATGGTCTATGTT+TGG + chr1_4:16416429-16416448 Msa0153210:intron 25.0%
! TTAATGTTCAACTCAAGTTT+GGG - chr1_4:16416464-16416483 None:intergenic 25.0%
! TTTAATGTTCAACTCAAGTT+TGG - chr1_4:16416465-16416484 None:intergenic 25.0%
!!! TTTTTGGCTAAAAGTCATTT+TGG + chr1_4:16416710-16416729 Msa0153210:intron 25.0%
!! GATTTGATTTATAATAGCCT+TGG - chr1_4:16416897-16416916 None:intergenic 25.0%
! TTCAGACTTAAAGCTAATAT+TGG - chr1_4:16416935-16416954 None:intergenic 25.0%
! AGTCTGAATTAATTCTCTAA+AGG + chr1_4:16416947-16416966 Msa0153210:intron 25.0%
!!! AATTTTCCTTGCTTTTAAAC+TGG + chr1_4:16417032-16417051 Msa0153210:intron 25.0%
!! TTTTTGGATGCAAATGAAAT+TGG + chr1_4:16417408-16417427 Msa0153210:CDS 25.0%
! AGCATATGAAATGTAGAAAT+CGG - chr1_4:16417445-16417464 None:intergenic 25.0%
! TGGTTTCTTATCTTATATCT+TGG + chr1_4:16417536-16417555 Msa0153210:intron 25.0%
! CAAAAGGATATAATTGTTCA+AGG + chr1_4:16417685-16417704 Msa0153210:intron 25.0%
! TTGTATAAATTGAAACCACA+TGG - chr1_4:16417718-16417737 None:intergenic 25.0%
! TATTGAGACAAAAAGTAATG+TGG - chr1_4:16418163-16418182 None:intergenic 25.0%
!!! CTGAATATTTTTTGTGTTGT+AGG + chr1_4:16418192-16418211 Msa0153210:intron 25.0%
! ATCTTTCTGTTAAGAATGAT+AGG + chr1_4:16418277-16418296 Msa0153210:CDS 25.0%
!!! ATTGTAGCTTTGGATTTATT+TGG + chr1_4:16418316-16418335 Msa0153210:intron 25.0%
! GAACATATATAAAATGACCT+TGG + chr1_4:16418470-16418489 Msa0153210:intron 25.0%
! GAATCTTTATAAATGGAAAG+TGG - chr1_4:16418589-16418608 None:intergenic 25.0%
! TATAAAGATTCAAATGCTAG+TGG + chr1_4:16418598-16418617 Msa0153210:CDS 25.0%
!!! ATTGTTTTCCTTGTTTCTTT+CGG - chr1_4:16418683-16418702 None:intergenic 25.0%
! TTTGCTAACACCTTAAAAAT+GGG + chr1_4:16419156-16419175 Msa0153210:intron 25.0%
!!! TCAGAAGTTTTAATTATCTG+GGG - chr1_4:16419617-16419636 None:intergenic 25.0%
! ATAATCAGTTTGTACTTGTA+TGG + chr1_4:16419780-16419799 Msa0153210:three_prime_UTR 25.0%
!!! TGAATGCAATTCTTTTTAGT+TGG + chr1_4:16419865-16419884 Msa0153210:three_prime_UTR 25.0%
! TTCTTTGAAAGTTTCCCATT+CGG - chr1_4:16415925-16415944 None:intergenic 30.0%
GTTGAATAAGAGATTTCTTG+AGG - chr1_4:16416022-16416041 None:intergenic 30.0%
TGTTACTAATTGTATCGCAT+CGG + chr1_4:16416214-16416233 Msa0153210:intron 30.0%
!!! TTGAATTTTTAGGACCTGAT+TGG + chr1_4:16416321-16416340 Msa0153210:intron 30.0%
TCATATGTGAAACCAAACAT+AGG + chr1_4:16416612-16416631 Msa0153210:intron 30.0%
! GCAAGGAAAATTGATTCTAA+AGG - chr1_4:16417024-16417043 None:intergenic 30.0%
TTTAAACTGGAACCAAACAT+AGG + chr1_4:16417045-16417064 Msa0153210:intron 30.0%
!!! TTTGCTGTTTTGATTTTGAG+TGG + chr1_4:16417315-16417334 Msa0153210:intron 30.0%
! GAGATGTTGTTATTGTTTAC+AGG + chr1_4:16417350-16417369 Msa0153210:intron 30.0%
GCATTAATTATGGATGCAAA+AGG + chr1_4:16417669-16417688 Msa0153210:intron 30.0%
GGAACTTAGGCTTAAAATTT+GGG - chr1_4:16417778-16417797 None:intergenic 30.0%
TGGAACTTAGGCTTAAAATT+TGG - chr1_4:16417779-16417798 None:intergenic 30.0%
ACAAAAGCTATAGATGTATG+TGG + chr1_4:16417946-16417965 Msa0153210:intron 30.0%
AATGTGGAGAGAATTGAAAA+GGG - chr1_4:16418147-16418166 None:intergenic 30.0%
TAATGTGGAGAGAATTGAAA+AGG - chr1_4:16418148-16418167 None:intergenic 30.0%
TAAATCCAAAGCTACAATAC+TGG - chr1_4:16418314-16418333 None:intergenic 30.0%
AACAAGAAGAGGAAGAAATA+AGG - chr1_4:16418351-16418370 None:intergenic 30.0%
!!! TTCTTCCTCTTCTTGTTTTT+TGG + chr1_4:16418354-16418373 Msa0153210:intron 30.0%
ATTGGAATTTCACAATTCCA+AGG - chr1_4:16418490-16418509 None:intergenic 30.0%
! TTAAAGGATTTCCATTTTGC+AGG - chr1_4:16418712-16418731 None:intergenic 30.0%
TGCAAAATGGAAATCCTTTA+AGG + chr1_4:16418711-16418730 Msa0153210:CDS 30.0%
ATCATCGATCAATCTTGAAA+AGG - chr1_4:16418772-16418791 None:intergenic 30.0%
CAATGTTTCTTAATGCTTTC+AGG + chr1_4:16418836-16418855 Msa0153210:intron 30.0%
! TTTGTTGATGAAGAATGTCA+AGG + chr1_4:16418918-16418937 Msa0153210:CDS 30.0%
! TTGTTGATGAAGAATGTCAA+GGG + chr1_4:16418919-16418938 Msa0153210:CDS 30.0%
!! TTTCACTTTTATAGCCTGTT+TGG + chr1_4:16419019-16419038 Msa0153210:intron 30.0%
ACTCTACAAATTAGAGCTTA+GGG - chr1_4:16419082-16419101 None:intergenic 30.0%
AACTCTACAAATTAGAGCTT+AGG - chr1_4:16419083-16419102 None:intergenic 30.0%
! TAAGCTCTAATTTGTAGAGT+TGG + chr1_4:16419082-16419101 Msa0153210:intron 30.0%
! AAGCTCTAATTTGTAGAGTT+GGG + chr1_4:16419083-16419102 Msa0153210:intron 30.0%
! GTTTGCTAACACCTTAAAAA+TGG + chr1_4:16419155-16419174 Msa0153210:intron 30.0%
ACTGTAAAACACAATGTGAT+AGG - chr1_4:16419360-16419379 None:intergenic 30.0%
!!! CATGTGTTTTTTGCTTGTAT+TGG + chr1_4:16419715-16419734 Msa0153210:three_prime_UTR 30.0%
GCTCTTCCAAAATTCATAGT+TGG + chr1_4:16415791-16415810 Msa0153210:five_prime_UTR 35.0%
! CGTGTTCCAACTATGAATTT+TGG - chr1_4:16415800-16415819 None:intergenic 35.0%
! TCTAGCATTGAAGAGAGAAA+CGG + chr1_4:16415896-16415915 Msa0153210:CDS 35.0%
GGTTGAGAATGTTAACGTTA+CGG - chr1_4:16415971-16415990 None:intergenic 35.0%
AATCTCTTATTCAACAGCGA+AGG + chr1_4:16416027-16416046 Msa0153210:CDS 35.0%
! GAAGCGATTGATGATTACAA+AGG + chr1_4:16416145-16416164 Msa0153210:CDS 35.0%
TGAATACTCACTCTAACCAA+GGG - chr1_4:16416186-16416205 None:intergenic 35.0%
ATGAATACTCACTCTAACCA+AGG - chr1_4:16416187-16416206 None:intergenic 35.0%
GATACAGTGAATATCCAATC+AGG - chr1_4:16416338-16416357 None:intergenic 35.0%
TTGGATATTCACTGTATCCT+TGG + chr1_4:16416340-16416359 Msa0153210:intron 35.0%
GTAAAACCTAAGCCTATGTT+TGG - chr1_4:16416753-16416772 None:intergenic 35.0%
! TGAGTTGAATGTGTTAACCA+AGG + chr1_4:16416877-16416896 Msa0153210:intron 35.0%
TTGGTTCCAGTTTAAAAGCA+AGG - chr1_4:16417041-16417060 None:intergenic 35.0%
ATTTGCGATATCTCAAAGTG+TGG + chr1_4:16417235-16417254 Msa0153210:CDS 35.0%
GGCAGAAAATTGCTTTGATA+AGG + chr1_4:16417371-16417390 Msa0153210:intron 35.0%
AAAACATTTGACACTTTCGC+TGG - chr1_4:16417641-16417660 None:intergenic 35.0%
! ATACGTGTGTGCATTTGTTA+TGG + chr1_4:16417752-16417771 Msa0153210:intron 35.0%
! TAAGGTATCTCATGGAACTT+AGG - chr1_4:16417791-16417810 None:intergenic 35.0%
! TCATCAACTAAGGTATCTCA+TGG - chr1_4:16417799-16417818 None:intergenic 35.0%
GTGATATGACTCATCAACTA+AGG - chr1_4:16417809-16417828 None:intergenic 35.0%
!! GCAGCTTTCAGTTTTTCAAT+GGG - chr1_4:16417892-16417911 None:intergenic 35.0%
!! TGCAGCTTTCAGTTTTTCAA+TGG - chr1_4:16417893-16417912 None:intergenic 35.0%
ATGTGGAGAGAATTGAAAAG+GGG - chr1_4:16418146-16418165 None:intergenic 35.0%
AGAACCATTACTGTTCAATG+GGG - chr1_4:16418229-16418248 None:intergenic 35.0%
CAGAACCATTACTGTTCAAT+GGG - chr1_4:16418230-16418249 None:intergenic 35.0%
AGAAAGATTACTGCTCAAAG+GGG - chr1_4:16418265-16418284 None:intergenic 35.0%
CAGAAAGATTACTGCTCAAA+GGG - chr1_4:16418266-16418285 None:intergenic 35.0%
ACAGAAAGATTACTGCTCAA+AGG - chr1_4:16418267-16418286 None:intergenic 35.0%
AGGATCCAAAAAACAAGAAG+AGG - chr1_4:16418362-16418381 None:intergenic 35.0%
! AGAGGTACATTGCATGAAAT+TGG - chr1_4:16418508-16418527 None:intergenic 35.0%
AATTTCATGCAATGTACCTC+TGG + chr1_4:16418507-16418526 Msa0153210:intron 35.0%
ATTTCATGCAATGTACCTCT+GGG + chr1_4:16418508-16418527 Msa0153210:intron 35.0%
ATTAAAACTGAGAAACCCAG+AGG - chr1_4:16418526-16418545 None:intergenic 35.0%
ACAATGCAATTCCTGCAAAA+TGG + chr1_4:16418698-16418717 Msa0153210:CDS 35.0%
AAAAGGCAGGAAAAAGAAAG+AGG - chr1_4:16418755-16418774 None:intergenic 35.0%
ATTCTTCATCAACAAACACC+GGG - chr1_4:16418914-16418933 None:intergenic 35.0%
CATTCTTCATCAACAAACAC+CGG - chr1_4:16418915-16418934 None:intergenic 35.0%
! GTAAGTTGAATCACTTTGCA+AGG + chr1_4:16418941-16418960 Msa0153210:intron 35.0%
GTGAAAGAGAAAAACAGACT+AGG - chr1_4:16419005-16419024 None:intergenic 35.0%
TTATAGCCTGTTTGGTTAAG+CGG + chr1_4:16419027-16419046 Msa0153210:intron 35.0%
ACATCAATCTGATCCTTCTT+TGG + chr1_4:16419203-16419222 Msa0153210:intron 35.0%
ATGGTAAAGCTTTCCAAAGA+AGG - chr1_4:16419219-16419238 None:intergenic 35.0%
!!! GCGTGTTGTTGGATTTTTTA+TGG + chr1_4:16419320-16419339 Msa0153210:intron 35.0%
TTCATTAAATCCGAAAGCAG+AGG + chr1_4:16419379-16419398 Msa0153210:CDS 35.0%
TCATTAAATCCGAAAGCAGA+GGG + chr1_4:16419380-16419399 Msa0153210:CDS 35.0%
AGTCCTCAAATTTGAAGACT+AGG + chr1_4:16419405-16419424 Msa0153210:CDS 35.0%
! TTGCCTAGTCTTCAAATTTG+AGG - chr1_4:16419411-16419430 None:intergenic 35.0%
GATTTCTGTCATATCAGAGA+GGG - chr1_4:16419482-16419501 None:intergenic 35.0%
AGATTTCTGTCATATCAGAG+AGG - chr1_4:16419483-16419502 None:intergenic 35.0%
!!! GAAGTTTTAATTATCTGGGG+AGG - chr1_4:16419614-16419633 None:intergenic 35.0%
AGCTTCAGCAACAACAACAA+TGG + chr1_4:16415833-16415852 Msa0153210:exon 40.0%
AATGCTAGAAACTCTGTCTC+TGG - chr1_4:16415885-16415904 None:intergenic 40.0%
! CTAGCATTGAAGAGAGAAAC+GGG + chr1_4:16415897-16415916 Msa0153210:CDS 40.0%
! AACGTGAGACCTTTGAAAAG+AGG + chr1_4:16415945-16415964 Msa0153210:CDS 40.0%
! TTTTTGCCTCTGTAGAACCA+AGG - chr1_4:16416360-16416379 None:intergenic 40.0%
GTGAAACCAAACATAGGCTT+AGG + chr1_4:16416618-16416637 Msa0153210:intron 40.0%
GAGAAACCTAAGCCTATGTT+TGG - chr1_4:16416627-16416646 None:intergenic 40.0%
! CCTATGTTTGGTTCCACATT+TGG - chr1_4:16416741-16416760 None:intergenic 40.0%
CCAAATGTGGAACCAAACAT+AGG + chr1_4:16416738-16416757 Msa0153210:intron 40.0%
! ATGGTGAAGGTGTATGAAGT+GGG + chr1_4:16417113-16417132 Msa0153210:intron 40.0%
AAAGTGTGGCTCGAATATGT+AGG + chr1_4:16417249-16417268 Msa0153210:intron 40.0%
AAGTGTGGCTCGAATATGTA+GGG + chr1_4:16417250-16417269 Msa0153210:intron 40.0%
CATTTCATATGCTTCGCACT+TGG + chr1_4:16417452-16417471 Msa0153210:CDS 40.0%
GCTAACCAGACATTTGAACT+TGG + chr1_4:16417498-16417517 Msa0153210:CDS 40.0%
CTATGCCAAGTTCAAATGTC+TGG - chr1_4:16417506-16417525 None:intergenic 40.0%
CATTTGAACTTGGCATAGCT+AGG + chr1_4:16417508-16417527 Msa0153210:CDS 40.0%
TTTCGCTGGAGTTATTCAAC+TGG - chr1_4:16417627-16417646 None:intergenic 40.0%
GTTCAAGGTTTATGTCCATG+TGG + chr1_4:16417700-16417719 Msa0153210:intron 40.0%
GTTGAGCATTCCTGCAAAAA+TGG - chr1_4:16417870-16417889 None:intergenic 40.0%
TTCTTGTACGCTCAATGTCA+AGG + chr1_4:16417923-16417942 Msa0153210:CDS 40.0%
CTAGGTAGCAGAAGAAATGA+GGG - chr1_4:16418049-16418068 None:intergenic 40.0%
TGTGGAGAGAATTGAAAAGG+GGG - chr1_4:16418145-16418164 None:intergenic 40.0%
GCAGAACCATTACTGTTCAA+TGG - chr1_4:16418231-16418250 None:intergenic 40.0%
CCAAAGCTACAATACTGGTA+GGG - chr1_4:16418309-16418328 None:intergenic 40.0%
TCCAAAGCTACAATACTGGT+AGG - chr1_4:16418310-16418329 None:intergenic 40.0%
CAGGAAAAAGAAAGAGGACT+AGG - chr1_4:16418749-16418768 None:intergenic 40.0%
TCGATCAATCTTGAAAAGGC+AGG - chr1_4:16418768-16418787 None:intergenic 40.0%
TGCCATGGAGGTTACAATTT+GGG - chr1_4:16418975-16418994 None:intergenic 40.0%
ATTAGAGCTTAGGGAACGTA+GGG - chr1_4:16419073-16419092 None:intergenic 40.0%
AATTAGAGCTTAGGGAACGT+AGG - chr1_4:16419074-16419093 None:intergenic 40.0%
ACGACGAAAAGGACTTCAAA+AGG + chr1_4:16419432-16419451 Msa0153210:CDS 40.0%
GAAGAGAAACCGAGTTACTA+AGG + chr1_4:16419556-16419575 Msa0153210:intron 40.0%
AGAAACCGAGTTACTAAGGA+AGG + chr1_4:16419560-16419579 Msa0153210:CDS 40.0%
TGGATCCTTCCTTAGTAACT+CGG - chr1_4:16419568-16419587 None:intergenic 40.0%
TGATAGCATGTTGCTGCAAA+GGG - chr1_4:16419650-16419669 None:intergenic 40.0%
ATGATAGCATGTTGCTGCAA+AGG - chr1_4:16419651-16419670 None:intergenic 40.0%
AACACATGTGTAGCTTTCCA+GGG - chr1_4:16419703-16419722 None:intergenic 40.0%
AAACACATGTGTAGCTTTCC+AGG - chr1_4:16419704-16419723 None:intergenic 40.0%
! ACGTTACGGCCTCTTTTCAA+AGG - chr1_4:16415957-16415976 None:intergenic 45.0%
!! CTGTATCCTTGGTTCTACAG+AGG + chr1_4:16416351-16416370 Msa0153210:intron 45.0%
!!! CATTTTGGCTGCTCCAAATG+TGG + chr1_4:16416725-16416744 Msa0153210:intron 45.0%
GTGGAACCAAACATAGGCTT+AGG + chr1_4:16416744-16416763 Msa0153210:intron 45.0%
! GATGGTGAAGGTGTATGAAG+TGG + chr1_4:16417112-16417131 Msa0153210:intron 45.0%
! AGCAATGTGTCCGTGCATTT+TGG + chr1_4:16417190-16417209 Msa0153210:CDS 45.0%
!! TGTCCGTGCATTTTGGCATT+CGG + chr1_4:16417197-16417216 Msa0153210:CDS 45.0%
GTTCCGAATGCCAAAATGCA+CGG - chr1_4:16417203-16417222 None:intergenic 45.0%
!! GTGCATTTTGGCATTCGGAA+CGG + chr1_4:16417202-16417221 Msa0153210:CDS 45.0%
TTGGCATTCGGAACGGTATA+AGG + chr1_4:16417209-16417228 Msa0153210:CDS 45.0%
CCTAGGTAGCAGAAGAAATG+AGG - chr1_4:16418050-16418069 None:intergenic 45.0%
CCTCATTTCTTCTGCTACCT+AGG + chr1_4:16418047-16418066 Msa0153210:intron 45.0%
!!! CTCTTTTTCGACTGGTTCCT+AGG - chr1_4:16418067-16418086 None:intergenic 45.0%
CTAGGAACCAGTCGAAAAAG+AGG + chr1_4:16418065-16418084 Msa0153210:intron 45.0%
! TTTGGAACTCTTCTCGCCAA+GGG + chr1_4:16418102-16418121 Msa0153210:CDS 45.0%
GACCTAACCATTATCTCCCT+TGG - chr1_4:16418121-16418140 None:intergenic 45.0%
TGGAGAGAATTGAAAAGGGG+GGG - chr1_4:16418143-16418162 None:intergenic 45.0%
GTGGAGAGAATTGAAAAGGG+GGG - chr1_4:16418144-16418163 None:intergenic 45.0%
TTACTGTTCAATGGGGCCAA+GGG - chr1_4:16418222-16418241 None:intergenic 45.0%
ATTACTGTTCAATGGGGCCA+AGG - chr1_4:16418223-16418242 None:intergenic 45.0%
TTGGCCCCATTGAACAGTAA+TGG + chr1_4:16418222-16418241 Msa0153210:CDS 45.0%
! TAATGGTTCTGCTAAGCCCT+TGG + chr1_4:16418239-16418258 Msa0153210:CDS 45.0%
CCCTACCAGTATTGTAGCTT+TGG + chr1_4:16418306-16418325 Msa0153210:intron 45.0%
! AGTTTGAGCCAAGAGTGTGA+CGG - chr1_4:16418649-16418668 None:intergenic 45.0%
TCACACTCTTGGCTCAAACT+TGG + chr1_4:16418649-16418668 Msa0153210:CDS 45.0%
GGCGAAAATCAGCACCTTAA+AGG - chr1_4:16418728-16418747 None:intergenic 45.0%
AACTGGAATTAGGGCTACAG+TGG + chr1_4:16418869-16418888 Msa0153210:CDS 45.0%
GTCCCAAATTGTAACCTCCA+TGG + chr1_4:16418970-16418989 Msa0153210:intron 45.0%
GTGCCATGGAGGTTACAATT+TGG - chr1_4:16418976-16418995 None:intergenic 45.0%
! TTTATGGGACAGCTTTTCCC+TGG + chr1_4:16419683-16419702 Msa0153210:three_prime_UTR 45.0%
!!! TTATTTTGTAAATTTTTTTT+TGG + chr1_4:16416694-16416713 Msa0153210:intron 5.0%
!!! ATAATCATATTATAAAATTT+TGG - chr1_4:16417992-16418011 None:intergenic 5.0%
!!! TAAGTTTTTTTAAATAAAAA+TGG - chr1_4:16419238-16419257 None:intergenic 5.0%
AGAGAGAAACGGGAACCGAA+TGG + chr1_4:16415907-16415926 Msa0153210:CDS 50.0%
GAGAGAAACGGGAACCGAAT+GGG + chr1_4:16415908-16415927 Msa0153210:CDS 50.0%
CACTCTAACCAAGGGAGAAG+AGG - chr1_4:16416178-16416197 None:intergenic 50.0%
!! GTTCAAGAAGCGTTTCCTCC+AGG + chr1_4:16417135-16417154 Msa0153210:CDS 50.0%
! CTTGGCATAGCTAGGTACTG+TGG + chr1_4:16417516-16417535 Msa0153210:intron 50.0%
!! GCTATGGCGACCATTTTTGC+AGG + chr1_4:16417857-16417876 Msa0153210:intron 50.0%
!!! ACAGGTGCCTCTTTTTCGAC+TGG - chr1_4:16418075-16418094 None:intergenic 50.0%
AGAGTTCCAAAGCTACGCAC+AGG - chr1_4:16418093-16418112 None:intergenic 50.0%
!! CTTTGGAACTCTTCTCGCCA+AGG + chr1_4:16418101-16418120 Msa0153210:CDS 50.0%
CTTCTCGCCAAGGGAGATAA+TGG + chr1_4:16418111-16418130 Msa0153210:CDS 50.0%
! CGCCAAGGGAGATAATGGTT+AGG + chr1_4:16418116-16418135 Msa0153210:intron 50.0%
TTACTGCTCAAAGGGGCCAA+GGG - chr1_4:16418258-16418277 None:intergenic 50.0%
ATTACTGCTCAAAGGGGCCA+AGG - chr1_4:16418259-16418278 None:intergenic 50.0%
! GTTTGAGCCAAGAGTGTGAC+GGG - chr1_4:16418648-16418667 None:intergenic 50.0%
CACTCTTGGCTCAAACTTGG+TGG + chr1_4:16418652-16418671 Msa0153210:CDS 50.0%
TGGTCGTGCCGAAAGAAACA+AGG + chr1_4:16418672-16418691 Msa0153210:CDS 50.0%
TCCCACAGCGAACTGGAATT+AGG + chr1_4:16418859-16418878 Msa0153210:CDS 50.0%
CCCTAATTCCAGTTCGCTGT+GGG - chr1_4:16418863-16418882 None:intergenic 50.0%
CCCACAGCGAACTGGAATTA+GGG + chr1_4:16418860-16418879 Msa0153210:CDS 50.0%
GGAATTAGGGCTACAGTGGT+TGG + chr1_4:16418873-16418892 Msa0153210:CDS 50.0%
ATCAACAAACACCGGGATGC+AGG - chr1_4:16418907-16418926 None:intergenic 50.0%
AGACTAGGTGCATAGTGCCA+TGG - chr1_4:16418990-16419009 None:intergenic 50.0%
GCATCACCGCTTAACCAAAC+AGG - chr1_4:16419036-16419055 None:intergenic 50.0%
!! TTGCTGTTTGCGCGTGTTGT+TGG + chr1_4:16419309-16419328 Msa0153210:intron 50.0%
GAGGACTTACCCTCTGCTTT+CGG - chr1_4:16419392-16419411 None:intergenic 50.0%
GACTAGGCAAGACGACGAAA+AGG + chr1_4:16419421-16419440 Msa0153210:CDS 50.0%
CTATGCGGGAAGTTGCGTAA+TGG - chr1_4:16419588-16419607 None:intergenic 50.0%
CGGTGTGACACTTGAGAGCA+TGG - chr1_4:16415992-16416011 None:intergenic 55.0%
GCGAAGATCCTCTTCTCCCT+TGG + chr1_4:16416167-16416186 Msa0153210:CDS 55.0%
!! CAAGAAGCGTTTCCTCCAGG+TGG + chr1_4:16417138-16417157 Msa0153210:CDS 55.0%
CTCCAGGTGGAGATAGCTCA+GGG + chr1_4:16417151-16417170 Msa0153210:CDS 55.0%
TTGTGTTGTAGGTGCGCCCT+TGG + chr1_4:16418203-16418222 Msa0153210:intron 55.0%
ATCCAGACCCGTCACACTCT+TGG + chr1_4:16418638-16418657 Msa0153210:CDS 55.0%
! TTTCAGGTCCCACAGCGAAC+TGG + chr1_4:16418852-16418871 Msa0153210:intron 55.0%
GCCCTAATTCCAGTTCGCTG+TGG - chr1_4:16418864-16418883 None:intergenic 55.0%
CTAGGTGCATAGTGCCATGG+AGG - chr1_4:16418987-16419006 None:intergenic 55.0%
TATCTGGGGAGGCTGCTATG+CGG - chr1_4:16419603-16419622 None:intergenic 55.0%
CCTGAGCTATCTCCACCTGG+AGG - chr1_4:16417153-16417172 None:intergenic 60.0%
CCTCCAGGTGGAGATAGCTC+AGG + chr1_4:16417150-16417169 Msa0153210:CDS 60.0%
AGCCCTGAGCTATCTCCACC+TGG - chr1_4:16417156-16417175 None:intergenic 60.0%
AGGTGGAGATAGCTCAGGGC+TGG + chr1_4:16417155-16417174 Msa0153210:CDS 60.0%
TGGAGATAGCTCAGGGCTGG+TGG + chr1_4:16417158-16417177 Msa0153210:CDS 60.0%
! GAGGCACCTGTGCGTAGCTT+TGG + chr1_4:16418084-16418103 Msa0153210:CDS 60.0%
!! GTGACGGGTCTGGATGAGGT+GGG - chr1_4:16418633-16418652 None:intergenic 60.0%
!! TGTGACGGGTCTGGATGAGG+TGG - chr1_4:16418634-16418653 None:intergenic 60.0%
!! GAGTGTGACGGGTCTGGATG+AGG - chr1_4:16418637-16418656 None:intergenic 60.0%
!! AGCCAAGAGTGTGACGGGTC+TGG - chr1_4:16418643-16418662 None:intergenic 60.0%
TGGTGCAAGTGCCTGCATCC+CGG + chr1_4:16418893-16418912 Msa0153210:CDS 60.0%
ATCTGGGGAGGCTGCTATGC+GGG - chr1_4:16419602-16419621 None:intergenic 60.0%
CGGGTCTGGATGAGGTGGGC+AGG - chr1_4:16418629-16418648 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 16415784 16419915 16415784 ID=Msa0153210;Name=Msa0153210
chr1_4 mRNA 16415784 16419915 16415784 ID=Msa0153210-mRNA-1;Parent=Msa0153210;Name=Msa0153210-mRNA-1;_AED=0.10;_eAED=0.10;_QI=68|1|1|1|1|1|11|292|390
chr1_4 exon 16415784 16416048 16415784 ID=Msa0153210-mRNA-1:exon:6311;Parent=Msa0153210-mRNA-1
chr1_4 exon 16416135 16416194 16416135 ID=Msa0153210-mRNA-1:exon:6312;Parent=Msa0153210-mRNA-1
chr1_4 exon 16417122 16417266 16417122 ID=Msa0153210-mRNA-1:exon:6313;Parent=Msa0153210-mRNA-1
chr1_4 exon 16417372 16417529 16417372 ID=Msa0153210-mRNA-1:exon:6314;Parent=Msa0153210-mRNA-1
chr1_4 exon 16417879 16417960 16417879 ID=Msa0153210-mRNA-1:exon:6315;Parent=Msa0153210-mRNA-1
chr1_4 exon 16418069 16418132 16418069 ID=Msa0153210-mRNA-1:exon:6316;Parent=Msa0153210-mRNA-1
chr1_4 exon 16418214 16418298 16418214 ID=Msa0153210-mRNA-1:exon:6317;Parent=Msa0153210-mRNA-1
chr1_4 exon 16418573 16418732 16418573 ID=Msa0153210-mRNA-1:exon:6318;Parent=Msa0153210-mRNA-1
chr1_4 exon 16418858 16418940 16418858 ID=Msa0153210-mRNA-1:exon:6319;Parent=Msa0153210-mRNA-1
chr1_4 exon 16419379 16419453 16419379 ID=Msa0153210-mRNA-1:exon:6320;Parent=Msa0153210-mRNA-1
chr1_4 exon 16419560 16419915 16419560 ID=Msa0153210-mRNA-1:exon:6321;Parent=Msa0153210-mRNA-1
chr1_4 five_prime_UTR 16415784 16415851 16415784 ID=Msa0153210-mRNA-1:five_prime_utr;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16415852 16416048 16415852 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16416135 16416194 16416135 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16417122 16417266 16417122 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16417372 16417529 16417372 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16417879 16417960 16417879 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16418069 16418132 16418069 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16418214 16418298 16418214 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16418573 16418732 16418573 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16418858 16418940 16418858 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16419379 16419453 16419379 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 CDS 16419560 16419623 16419560 ID=Msa0153210-mRNA-1:cds;Parent=Msa0153210-mRNA-1
chr1_4 three_prime_UTR 16419624 16419915 16419624 ID=Msa0153210-mRNA-1:three_prime_utr;Parent=Msa0153210-mRNA-1
Gene Sequence

>Msa0153210

ATGGCAGAGATTGAAACGCAGAAGATAGATCCAGAGACAGAGTTTCTAGCATTGAAGAGAGAAACGGGAACCGAATGGGAAACTTTCAAAGAAAACGTGAGACCTTTGAAAAGAGGCCGTAACGTTAACATTCTCAACCATGCTCTCAAGTGTCACACCGATAATTACCTCAAGAAATCTCTTATTCAACAGCGAAGAAAACTTAGTGAAGCGATTGATGATTACAAAGGCGAAGATCCTCTTCTCCCTTGGTTAGAGTGTATGAAGTGGGTTCAAGAAGCGTTTCCTCCAGGTGGAGATAGCTCAGGGCTGGTGGTGATTTATGAGCAATGTGTCCGTGCATTTTGGCATTCGGAACGGTATAAGGAAGATTTGCGATATCTCAAAGTGTGGCTCGAATATGCAGAAAATTGCTTTGATAAGGAAGTTATATATTCTTTTTTGGATGCAAATGAAATTGGAAAAACTCATTCCGATTTCTACATTTCATATGCTTCGCACTTGGAATCTAAGAACAAGTTTAAAGCTGCTAACCAGACATTTGAACTTGGCATAGCTAGGAATGCTCAACCCATTGAAAAACTGAAAGCTGCATATAGAAAATTTCTTGTACGCTCAATGTCAAGGACAAAAGCTATAGATGAACCAGTCGAAAAAGAGGCACCTGTGCGTAGCTTTGGAACTCTTCTCGCCAAGGGAGATAATGGTGCGCCCTTGGCCCCATTGAACAGTAATGGTTCTGCTAAGCCCTTGGCCCCTTTGAGCAGTAATCTTTCTGTTAAGAATGATAGGACTCGAGCAGCTCCACTTTCCATTTATAAAGATTCAAATGCTAGTGGTGAGACCTGCCCACCTCATCCAGACCCGTCACACTCTTGGCTCAAACTTGGTGGTCGTGCCGAAAGAAACAAGGAAAACAATGCAATTCCTGCAAAATGGAAATCCTTTAAGGTCCCACAGCGAACTGGAATTAGGGCTACAGTGGTTGGTGCAAGTGCCTGCATCCCGGTGTTTGTTGATGAAGAATGTCAAGGTTCATTAAATCCGAAAGCAGAGGGTAAGTCCTCAAATTTGAAGACTAGGCAAGACGACGAAAAGGACTTCAAAAGAGAAACCGAGTTACTAAGGAAGGATCCATTACGCAACTTCCCGCATAGCAGCCTCCCCAGATAA

Protein sequence

>Msa0153210

MAEIETQKIDPETEFLALKRETGTEWETFKENVRPLKRGRNVNILNHALKCHTDNYLKKSLIQQRRKLSEAIDDYKGEDPLLPWLECMKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSERYKEDLRYLKVWLEYAENCFDKEVIYSFLDANEIGKTHSDFYISYASHLESKNKFKAANQTFELGIARNAQPIEKLKAAYRKFLVRSMSRTKAIDEPVEKEAPVRSFGTLLAKGDNGAPLAPLNSNGSAKPLAPLSSNLSVKNDRTRAAPLSIYKDSNASGETCPPHPDPSHSWLKLGGRAERNKENNAIPAKWKSFKVPQRTGIRATVVGASACIPVFVDEECQGSLNPKAEGKSSNLKTRQDDEKDFKRETELLRKDPLRNFPHSSLPR*