AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0428150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428150 MtrunA17_Chr3g0131301 98.137 644 11 1 1 643 72 715 0.0 1317
Msa0428150 MtrunA17_Chr3g0131291 82.609 644 108 3 1 643 1 641 0.0 1008
Msa0428150 MtrunA17_Chr2g0278291 49.142 466 206 4 177 642 189 623 2.52e-141 425
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428150 AT5G23570.1 54.180 622 253 14 28 638 18 618 0.0 582
Msa0428150 AT5G23570.3 54.180 622 253 14 28 638 18 618 0.0 582
Msa0428150 AT5G23570.4 56.349 504 192 12 28 523 18 501 1.35e-176 511
Msa0428150 AT5G23570.2 56.349 504 192 12 28 523 18 501 1.35e-176 511

Find 223 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCACTCATTTGTCGAATT+TGG 0.126725 3_2:+78949380 None:intergenic
TTGAGCCAGCTGCTCAGTTT+TGG 0.227402 3_2:+78950966 None:intergenic
CGTTCCTCCTCTGCATTTGC+AGG 0.237429 3_2:+78948331 None:intergenic
CATTGTCTTTCGCAGCTTCT+CGG 0.262638 3_2:+78949270 None:intergenic
CTGGGGAAGCATTTGGTAAA+TGG 0.288604 3_2:-78950156 Msa0428150:CDS
AAAGGACCTACCACCTCTTC+TGG 0.303128 3_2:+78951047 None:intergenic
TAGTCAGGTTATCCAAATTC+TGG 0.305878 3_2:+78950380 None:intergenic
CAGCCAGCCACTGGTGGATA+TGG 0.307074 3_2:-78950670 Msa0428150:CDS
AACTGATGAAACGTGAAATT+CGG 0.308267 3_2:+78951947 None:intergenic
CATATCCACCAGTGGCTGGC+TGG 0.313166 3_2:+78950671 None:intergenic
GGCTGGAGGACCCCGCTGTT+TGG 0.326991 3_2:+78950846 None:intergenic
CTCTACAGGGTGGCTGGAAC+TGG 0.336380 3_2:-78950612 Msa0428150:CDS
CTAAAACAAAGGGTTCAAAA+AGG 0.344221 3_2:-78950252 Msa0428150:CDS
AGCTCTCCATTTCTTTGTCT+TGG 0.352836 3_2:+78947966 None:intergenic
TTCCCTTCCATTACCTCAAA+AGG 0.355110 3_2:-78947445 Msa0428150:three_prime_UTR
ATGAATACCGCTGAAACATT+AGG 0.355356 3_2:-78947709 Msa0428150:three_prime_UTR
CATCATTCCTCCTCCTCTAC+AGG 0.356057 3_2:-78950626 Msa0428150:CDS
TGTTTGGCCTCCAATGGTTA+TGG 0.357696 3_2:-78950098 Msa0428150:CDS
CAATGCTCTCTTCATGGGCT+TGG 0.358604 3_2:+78947918 None:intergenic
AGCCTCAGCTAGTGGTTATC+TGG 0.359386 3_2:-78949765 Msa0428150:CDS
GGTGGCAATCGACAGCTCTT+TGG 0.361150 3_2:-78949650 Msa0428150:CDS
AGAAGGATCATGAAATTGTT+TGG 0.365432 3_2:-78950114 Msa0428150:CDS
TTGATGAGGAATTGCGTAGA+AGG 0.372096 3_2:-78950198 Msa0428150:CDS
TAGCAGCAATGCTCTCTTCA+TGG 0.389671 3_2:+78947912 None:intergenic
ATATCCACCAGTGGCTGGCT+GGG 0.390269 3_2:+78950672 None:intergenic
CCAGCTTGTCAAGGTGGTCC+TGG 0.394071 3_2:-78950319 Msa0428150:CDS
ACTGATGAAACGTGAAATTC+GGG 0.397669 3_2:+78951948 None:intergenic
AAAGCTCTTGAGGAATCCTT+TGG 0.402884 3_2:-78949301 Msa0428150:CDS
CTCCTCCTCTACAGGGTGGC+TGG 0.406525 3_2:-78950618 Msa0428150:CDS
GAGTTGCATACCCTTGTGTA+TGG 0.409163 3_2:-78947574 Msa0428150:three_prime_UTR
ATTCGGGACAAAATGCAAAA+TGG 0.412314 3_2:+78951964 None:intergenic
GGACAGTGCCACTGTCTCTC+TGG 0.414276 3_2:+78950340 None:intergenic
TTTGGTGCACTACCATTTCC+TGG 0.415937 3_2:+78949398 None:intergenic
CATTTATCTGATCAATAGTC+AGG 0.417399 3_2:+78950365 None:intergenic
GCTGATGTTAACTTAGGATC+TGG 0.419420 3_2:-78950937 Msa0428150:CDS
ACCAGCATTTGGTGTCTGCC+AGG 0.423154 3_2:+78950729 None:intergenic
TGCTCTTCTTCCGTGTCTCA+TGG 0.423168 3_2:+78950422 None:intergenic
CCTTGTGTATGGGGTGCAAT+TGG 0.424768 3_2:-78947563 Msa0428150:three_prime_UTR
TCTTCAAATAAAGAAGTTGC+TGG 0.427490 3_2:+78949353 None:intergenic
GGTATTGCTGATGTTAACTT+AGG 0.436214 3_2:-78950943 Msa0428150:CDS
TTATCTGGAGGCAGAACGTC+TGG 0.438026 3_2:-78949750 Msa0428150:CDS
GGAGAAACAAATTGTATCTT+CGG 0.438156 3_2:+78949675 None:intergenic
GGAGGACGACTGTGATGATC+TGG 0.438994 3_2:-78950503 Msa0428150:CDS
TTACCAAATGCTTCCCCAGC+TGG 0.441325 3_2:+78950160 None:intergenic
GTTTATTTAGTGGACAGGTA+TGG 0.443972 3_2:-78949891 Msa0428150:intron
GTCCCAGCTGGGGAAGCATT+TGG 0.446522 3_2:-78950163 Msa0428150:CDS
TTCTTCTGTTCAAACTCCTC+TGG 0.450708 3_2:+78950559 None:intergenic
GAAGAGGCACTGGGAGGAAG+AGG 0.456512 3_2:-78947885 Msa0428150:CDS
GTAAGAGCACGGCATTCATA+TGG 0.457091 3_2:-78949827 Msa0428150:CDS
TGCAGATGTGGCTCAAAAGC+AGG 0.458108 3_2:-78950794 Msa0428150:CDS
GCCGATCTTCGCAGAATCAC+CGG 0.459400 3_2:-78951840 Msa0428150:intron
GGAGAGCTTTGTCGAAGAAA+AGG 0.460169 3_2:-78947951 Msa0428150:CDS
GAGTTTGAACAGAAGAATGA+TGG 0.460624 3_2:-78950553 Msa0428150:CDS
TATCCACCAGTGGCTGGCTG+GGG 0.464606 3_2:+78950673 None:intergenic
AAGCGGTGCTGCCAAACAGC+GGG 0.465469 3_2:-78950857 Msa0428150:CDS
AGTGGAGCTGGAAGAGCTGC+TGG 0.466783 3_2:-78950757 Msa0428150:CDS
GAAGAAGTTTGATGAGGACT+TGG 0.467634 3_2:-78947852 Msa0428150:CDS
AGATGATGATGATGAGGAGG+AGG 0.470515 3_2:-78950524 Msa0428150:CDS
CGAACTCCAAGACAAAGAAA+TGG 0.470651 3_2:-78947972 Msa0428150:CDS
ACGACCTGGAGGCTTTCAAC+AGG 0.471763 3_2:-78949610 Msa0428150:CDS
CTGTAGAGGAGGAGGAATGA+TGG 0.473766 3_2:+78950627 None:intergenic
TTGACACTCGCGGTGTTGCA+AGG 0.475436 3_2:-78947630 Msa0428150:three_prime_UTR
TCTGCATTTCCCCATGCTCT+AGG 0.476420 3_2:+78950811 None:intergenic
ATGAATCATGCTAAAACAAA+GGG 0.476704 3_2:-78950262 Msa0428150:CDS
CTGGGAGGAAGAGGTGGAGA+TGG 0.478290 3_2:-78947876 Msa0428150:CDS
TTTATTTAGTGGACAGGTAT+GGG 0.478428 3_2:-78949890 Msa0428150:intron
AATGAGGTCCTACCAGGAAA+TGG 0.480977 3_2:-78949410 Msa0428150:CDS
GTCATCACTCTCGCTTTCTC+CGG 0.481052 3_2:-78951908 Msa0428150:five_prime_UTR
CTGCTATGAAGAAGAGGCAC+TGG 0.481919 3_2:-78947895 Msa0428150:CDS
CTGGACAGGATGATGGGCCA+TGG 0.483734 3_2:-78950918 Msa0428150:CDS
GGTAGGTCCTTTACTGCGGC+TGG 0.484425 3_2:-78951036 Msa0428150:CDS
TGATGATGATGAGGAGGAGG+AGG 0.491800 3_2:-78950521 Msa0428150:CDS
ATCATTGCCAGCCGCAGTAA+AGG 0.491954 3_2:+78951029 None:intergenic
TAAAATAGTCAAGAAGCTCT+TGG 0.493762 3_2:+78949864 None:intergenic
TGAACAAGAACGATTCTTCA+AGG 0.493855 3_2:-78948455 Msa0428150:CDS
AGGTTTAAAAGAAGAAGAGA+AGG 0.494739 3_2:-78950131 Msa0428150:CDS
GGCACTACAGTAGTCCCAGC+TGG 0.494847 3_2:-78950175 Msa0428150:CDS
TTAGGATCTGGACAGGATGA+TGG 0.494954 3_2:-78950925 Msa0428150:CDS
GAAGAGCTGCTGGAAACCCC+TGG 0.495073 3_2:-78950747 Msa0428150:CDS
GGTCTCATATAACCAGCATT+TGG 0.496607 3_2:+78950718 None:intergenic
TGAACAAGATGAAAATGATA+AGG 0.498263 3_2:-78950059 Msa0428150:intron
GAATTTCACGTTTCATCAGT+TGG 0.498860 3_2:-78951945 Msa0428150:five_prime_UTR
GGAAGGCCCCAGCCAGCCAC+TGG 0.498896 3_2:-78950679 Msa0428150:CDS
ACCGGTGATTCTGCGAAGAT+CGG 0.498901 3_2:+78951839 None:intergenic
TGATCCCAAAACTGAGCAGC+TGG 0.500326 3_2:-78950971 Msa0428150:CDS
CTTCCATTGCCTCTACCAGC+GGG 0.500451 3_2:+78950697 None:intergenic
CCAGCATTTGGTGTCTGCCA+GGG 0.501741 3_2:+78950730 None:intergenic
AAATTGAGAATTTGGAACTC+AGG 0.502531 3_2:-78947679 Msa0428150:three_prime_UTR
GATGAATCATGCTAAAACAA+AGG 0.503073 3_2:-78950263 Msa0428150:CDS
TCCCTTCCATTACCTCAAAA+GGG 0.510665 3_2:-78947444 Msa0428150:three_prime_UTR
TCTCTTTGGATGTAGGGTGG+AGG 0.511496 3_2:-78948011 Msa0428150:intron
TATCCATATCCACCAGTGGC+TGG 0.511523 3_2:+78950667 None:intergenic
GTGCACTACCATTTCCTGGT+AGG 0.512382 3_2:+78949402 None:intergenic
TGAGGACTTGGCCAAACTCA+TGG 0.512417 3_2:-78947840 Msa0428150:CDS
TGCTCTAGGATTAGAACCAT+GGG 0.512421 3_2:+78950825 None:intergenic
TGAAATTGTTTGGCCTCCAA+TGG 0.515700 3_2:-78950104 Msa0428150:CDS
CAGCATTTGGTGTCTGCCAG+GGG 0.520729 3_2:+78950731 None:intergenic
AGAAGATGATGATGATGAGG+AGG 0.521336 3_2:-78950527 Msa0428150:CDS
AGCAGCAATGCTCTCTTCAT+GGG 0.523970 3_2:+78947913 None:intergenic
ATCATTCCTCCTCCTCTACA+GGG 0.524207 3_2:-78950625 Msa0428150:CDS
TAAAAGAAATGCAAAGGAAG+AGG 0.526529 3_2:-78948410 Msa0428150:CDS
CCAGGACCACCTTGACAAGC+TGG 0.529466 3_2:+78950319 None:intergenic
AGATACAATTTGTTTCTCCC+TGG 0.529912 3_2:-78949671 Msa0428150:CDS
TCGACAGCTCTTTGGATACA+TGG 0.530084 3_2:-78949642 Msa0428150:CDS
GGTTGAGAGCTACGCGCTGC+CGG 0.530124 3_2:+78951889 None:intergenic
TCATCCCTCGATGACCTTGA+GGG 0.531293 3_2:+78949804 None:intergenic
GAAACATTCAAAAGCTCTTG+AGG 0.531663 3_2:-78949311 Msa0428150:CDS
GAGGCACTGGGAGGAAGAGG+TGG 0.531915 3_2:-78947882 Msa0428150:CDS
CTCTTTGGATGTAGGGTGGA+GGG 0.533016 3_2:-78948010 Msa0428150:intron
TGATGAGGAATTGCGTAGAA+GGG 0.533128 3_2:-78950197 Msa0428150:CDS
TACAATTTGTTTCTCCCTGG+TGG 0.533325 3_2:-78949668 Msa0428150:CDS
ATGTGGAATAACAGTGGAGC+TGG 0.534229 3_2:-78950769 Msa0428150:CDS
TATATGAGACCCGCTGGTAG+AGG 0.535877 3_2:-78950706 Msa0428150:CDS
TTCTTTGAATAAGTCTCCCA+TGG 0.536917 3_2:+78950901 None:intergenic
TCTTTATTTGAAGAACAAGA+TGG 0.537740 3_2:-78949344 Msa0428150:CDS
GAAGCATTTGGTAAATGGAA+AGG 0.538253 3_2:-78950151 Msa0428150:CDS
GTCCAATGGTCTCTTTCAGT+GGG 0.538468 3_2:-78947786 Msa0428150:three_prime_UTR
TACCAAATGCTTCCCCAGCT+GGG 0.538618 3_2:+78950161 None:intergenic
AGACACGGAAGAAGAGCAAA+TGG 0.539757 3_2:-78950417 Msa0428150:CDS
GTGGTCCTGGTGCTATTGAT+TGG 0.540649 3_2:-78950306 Msa0428150:CDS
GTATGAAATGAGGTCCTACC+AGG 0.541290 3_2:-78949416 Msa0428150:CDS
AAGAGCTGTCGATTGCCACC+AGG 0.541548 3_2:+78949653 None:intergenic
AGGCCCCAGCCAGCCACTGG+TGG 0.541602 3_2:-78950676 Msa0428150:CDS
CGAGAAGCTGCGAAAGACAA+TGG 0.543259 3_2:-78949269 Msa0428150:CDS
TGGTTCTAATCCTAGAGCAT+GGG 0.547173 3_2:-78950821 Msa0428150:CDS
AAGGTGAAGAAGACAACTAC+TGG 0.547743 3_2:-78948355 Msa0428150:CDS
GCACTACAGTAGTCCCAGCT+GGG 0.548415 3_2:-78950174 Msa0428150:CDS
CCTTCCATTGCCTCTACCAG+CGG 0.549092 3_2:+78950696 None:intergenic
AGACCCGCTGGTAGAGGCAA+TGG 0.549173 3_2:-78950700 Msa0428150:CDS
CAGCCACCCTGTAGAGGAGG+AGG 0.549991 3_2:+78950619 None:intergenic
CACTGTCCAGCTTGTCAAGG+TGG 0.550353 3_2:-78950325 Msa0428150:CDS
CGGCATTCATATGGCCCTCA+AGG 0.550943 3_2:-78949818 Msa0428150:CDS
AGTTGCATACCCTTGTGTAT+GGG 0.552387 3_2:-78947573 Msa0428150:three_prime_UTR
TTCTGAACCATAACCATTGG+AGG 0.554853 3_2:+78950091 None:intergenic
GGATTTCGAGAGGATGCAGC+AGG 0.555022 3_2:-78948389 Msa0428150:CDS
TAGGATCTGGACAGGATGAT+GGG 0.555294 3_2:-78950924 Msa0428150:CDS
CCCTGGCAGACACCAAATGC+TGG 0.558318 3_2:-78950730 Msa0428150:CDS
CTAGGATTAGAACCATGGGC+TGG 0.560267 3_2:+78950829 None:intergenic
TGTAGAGGAGGAGGAATGAT+GGG 0.560314 3_2:+78950628 None:intergenic
AAGGAACTAATAGAGAAGCT+TGG 0.563248 3_2:-78949709 Msa0428150:CDS
AATGAGTGATGAATATGATT+CGG 0.563280 3_2:-78950461 Msa0428150:CDS
ATGGTTCTAATCCTAGAGCA+TGG 0.563469 3_2:-78950822 Msa0428150:CDS
TTCCAGCCACCCTGTAGAGG+AGG 0.563976 3_2:+78950616 None:intergenic
CTGCAAATGCAGAGGAGGAA+CGG 0.564181 3_2:-78948330 Msa0428150:CDS
AAAACTGAGCAGCTGGCTCA+AGG 0.565606 3_2:-78950964 Msa0428150:CDS
GTCAAAAGAGCCATGAGACA+CGG 0.572339 3_2:-78950432 Msa0428150:CDS
TGGACAGGATGATGGGCCAT+GGG 0.572470 3_2:-78950917 Msa0428150:CDS
ATGTTTGAAGCCTCAGCTAG+TGG 0.573694 3_2:-78949773 Msa0428150:CDS
CAGTTCCAGCCACCCTGTAG+AGG 0.573745 3_2:+78950613 None:intergenic
CAGCGGGGTCCTCCAGCCCA+TGG 0.574927 3_2:-78950841 Msa0428150:CDS
ATGCTCTAGGATTAGAACCA+TGG 0.578614 3_2:+78950824 None:intergenic
GCTGGTTATATGAGACCCGC+TGG 0.578960 3_2:-78950712 Msa0428150:CDS
GCATGAAGAAATAAAAGAAG+AGG 0.582341 3_2:-78949209 Msa0428150:intron
CAATGGTCTCTTTCAGTGGG+GGG 0.583898 3_2:-78947783 Msa0428150:three_prime_UTR
GCATGTTTATAAACACAGGC+AGG 0.584606 3_2:-78947748 Msa0428150:three_prime_UTR
AGTCCAATGGTCTCTTTCAG+TGG 0.586479 3_2:-78947787 Msa0428150:three_prime_UTR
TTGCAACACCGCGAGTGTCA+AGG 0.588629 3_2:+78947632 None:intergenic
GCATTGCTGCTATGAAGAAG+AGG 0.588894 3_2:-78947901 Msa0428150:CDS
AATGCCTGTTGAAAGCCTCC+AGG 0.589670 3_2:+78949606 None:intergenic
CCACGATAAAAGAAATGCAA+AGG 0.589885 3_2:-78948416 Msa0428150:CDS
GCAGCAGGAAGAGCGTGAGA+AGG 0.590681 3_2:-78948374 Msa0428150:CDS
TGCTATGAAGAAGAGGCACT+GGG 0.592507 3_2:-78947894 Msa0428150:CDS
AGAAGAAGATGATGATGATG+AGG 0.592779 3_2:-78950530 Msa0428150:CDS
GGTGCTATTGATTGGTACAG+AGG 0.593628 3_2:-78950298 Msa0428150:CDS
TGTTAACTTAGGATCTGGAC+AGG 0.593990 3_2:-78950932 Msa0428150:CDS
GCAGATGTGGCTCAAAAGCA+GGG 0.600056 3_2:-78950793 Msa0428150:CDS
CCAATTGCACCCCATACACA+AGG 0.602727 3_2:+78947563 None:intergenic
TGGCTCAAAAGCAGGGCATG+TGG 0.604785 3_2:-78950786 Msa0428150:CDS
GCTTTCAACAGGCATTGCCA+AGG 0.605892 3_2:-78949599 Msa0428150:intron
CTGTACCAATCAATAGCACC+AGG 0.608472 3_2:+78950301 None:intergenic
GTTGCATACCCTTGTGTATG+GGG 0.610570 3_2:-78947572 Msa0428150:three_prime_UTR
CCAATGGTCTCTTTCAGTGG+GGG 0.611000 3_2:-78947784 Msa0428150:three_prime_UTR
CTGAAGAAAAGTCGGAGGAA+CGG 0.611013 3_2:+78951862 None:intergenic
AGAGCTGTCGATTGCCACCA+GGG 0.611123 3_2:+78949654 None:intergenic
TGGCACTGTCCAGCTTGTCA+AGG 0.612358 3_2:-78950328 Msa0428150:CDS
AGAATGAGTTCCAGAAGAGG+TGG 0.612845 3_2:-78951057 Msa0428150:CDS
CATGGCAACTAAAGACGACC+TGG 0.613162 3_2:-78949624 Msa0428150:CDS
TGGTCCTGCAAATGCAGAGG+AGG 0.614122 3_2:-78948335 Msa0428150:CDS
CCGCTGGTAGAGGCAATGGA+AGG 0.614168 3_2:-78950696 Msa0428150:CDS
CAAGACTCAAGTATGAAATG+AGG 0.614242 3_2:-78949426 Msa0428150:CDS
GAAGCGGTGCTGCCAAACAG+CGG 0.614252 3_2:-78950858 Msa0428150:CDS
GCTTGCTGTACTTCTTGATG+AGG 0.619881 3_2:-78950212 Msa0428150:CDS
CTCATCCCTCGATGACCTTG+AGG 0.620639 3_2:+78949803 None:intergenic
CTTATGCGGCAGTAAGAGCA+CGG 0.623295 3_2:-78949838 Msa0428150:CDS
GGATTAGAACCATGGGCTGG+AGG 0.624835 3_2:+78950832 None:intergenic
GATGGAGAAGAAGTTTGATG+AGG 0.626676 3_2:-78947858 Msa0428150:CDS
CTTCTCGGTCACTATACCAA+AGG 0.627323 3_2:+78949285 None:intergenic
GATGAGGAATTGCGTAGAAG+GGG 0.628195 3_2:-78950196 Msa0428150:CDS
AAAAGTCGGAGGAACGGAGG+CGG 0.628336 3_2:+78951868 None:intergenic
ATGGCCCTCAAGGTCATCGA+GGG 0.629112 3_2:-78949808 Msa0428150:CDS
GTGTTCTGAACCATAACCAT+TGG 0.630457 3_2:+78950088 None:intergenic
ACTGGAAATCAACTCATGCA+AGG 0.631690 3_2:-78950594 Msa0428150:CDS
TACTGGTCCTGCAAATGCAG+AGG 0.631949 3_2:-78948338 Msa0428150:CDS
AAGGAATGAAATTGTACCAG+AGG 0.635504 3_2:-78950575 Msa0428150:CDS
CTCAGCTAGTGGTTATCTGG+AGG 0.635751 3_2:-78949762 Msa0428150:CDS
TGAGTTCCAGAAGAGGTGGT+AGG 0.638395 3_2:-78951053 Msa0428150:CDS
AGCATGGGGAAATGCAGATG+TGG 0.639900 3_2:-78950806 Msa0428150:CDS
AAGAACGATTCTTCAAGGAA+CGG 0.640239 3_2:-78948450 Msa0428150:CDS
TGGAGGAGAATCGCATTGTG+AGG 0.644382 3_2:-78949249 Msa0428150:CDS
AAGATCGGCTGAAGAAAAGT+CGG 0.645279 3_2:+78951854 None:intergenic
CTCCAGATAACCACTAGCTG+AGG 0.645712 3_2:+78949763 None:intergenic
GGTTCTAATCCTAGAGCATG+GGG 0.649486 3_2:-78950820 Msa0428150:CDS
TCCAATGGTCTCTTTCAGTG+GGG 0.654219 3_2:-78947785 Msa0428150:three_prime_UTR
AGGTGCATGTTTATAAACAC+AGG 0.654991 3_2:-78947752 Msa0428150:three_prime_UTR
AGGAGAATCGCATTGTGAGG+CGG 0.658078 3_2:-78949246 Msa0428150:CDS
ATCGGCTGAAGAAAAGTCGG+AGG 0.660845 3_2:+78951857 None:intergenic
TAAATGAACCAGAGAGACAG+TGG 0.663976 3_2:-78950348 Msa0428150:CDS
CAAAGGAAGAGGATTTCGAG+AGG 0.667588 3_2:-78948399 Msa0428150:CDS
AAGAAAAGTCGGAGGAACGG+AGG 0.667691 3_2:+78951865 None:intergenic
ACAAGAATGAGTTCCAGAAG+AGG 0.668165 3_2:-78951060 Msa0428150:exon
CAGGGCATGTGGAATAACAG+TGG 0.668344 3_2:-78950775 Msa0428150:CDS
CACTACAGTAGTCCCAGCTG+GGG 0.668801 3_2:-78950173 Msa0428150:CDS
ATTCCTCCTCCTCTACAGGG+TGG 0.683487 3_2:-78950622 Msa0428150:CDS
AGGTGGTAGGTCCTTTACTG+CGG 0.684790 3_2:-78951040 Msa0428150:CDS
ATTGTATCCATATCCACCAG+TGG 0.693540 3_2:+78950663 None:intergenic
GTATTGCTCCTTGACACTCG+CGG 0.693683 3_2:-78947640 Msa0428150:three_prime_UTR
CCAAATTCGACAAATGAGTG+AGG 0.699862 3_2:-78949380 Msa0428150:CDS
AGCGGTGCTGCCAAACAGCG+GGG 0.701494 3_2:-78950856 Msa0428150:CDS
GAAGCTGCGAAAGACAATGG+AGG 0.702107 3_2:-78949266 Msa0428150:CDS
GGCAACTAAAGACGACCTGG+AGG 0.707545 3_2:-78949621 Msa0428150:CDS
TATGGCCCTCAAGGTCATCG+AGG 0.715301 3_2:-78949809 Msa0428150:CDS
CAATTGCACCCCATACACAA+GGG 0.721172 3_2:+78947564 None:intergenic
TATGAAGAAGAGGCACTGGG+AGG 0.734930 3_2:-78947891 Msa0428150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTCTTGA+TGG - chr3_2:78947948-78947967 Msa0428150:CDS 10.0%
!!! TAAAATATTTTTTCTGCATT+TGG - chr3_2:78948024-78948043 Msa0428150:intron 15.0%
!!! ATTTTGTTTTGTTTATTTAG+TGG - chr3_2:78949509-78949528 Msa0428150:intron 15.0%
!!! AAAATTTTATTGGCAATTTA+TGG - chr3_2:78951332-78951351 Msa0428150:intron 15.0%
!! AGAAAATAAGAAATGAAATG+AGG - chr3_2:78947785-78947804 Msa0428150:three_prime_UTR 20.0%
!! AAAAAAAACTAAGACTAAAG+AGG + chr3_2:78947934-78947953 None:intergenic 20.0%
!! CAATAAAAACAACAAACAAA+GGG + chr3_2:78948232-78948251 None:intergenic 20.0%
!! TCAATAAAAACAACAAACAA+AGG + chr3_2:78948233-78948252 None:intergenic 20.0%
!! TTAAAACATAATAACACAGA+AGG + chr3_2:78948272-78948291 None:intergenic 20.0%
!! TCTTTATACTTTCACTATTT+AGG - chr3_2:78949858-78949877 Msa0428150:CDS 20.0%
!!! TGTCCACAAATAATTTTATA+CGG + chr3_2:78950293-78950312 None:intergenic 20.0%
!! GATTTATAATAAACACAAAC+TGG + chr3_2:78950682-78950701 None:intergenic 20.0%
!!! TTTTGTTAATTTTGCAAAGT+TGG - chr3_2:78950812-78950831 Msa0428150:CDS 20.0%
!!! ACACATGTACAAAATTTTAT+TGG - chr3_2:78951322-78951341 Msa0428150:intron 20.0%
!!! GTTTTTTGAAATTGAGAATT+TGG - chr3_2:78951723-78951742 Msa0428150:intron 20.0%
! CTCTGAGCAAAAAAAAAAAA+AGG + chr3_2:78947748-78947767 None:intergenic 25.0%
!! GTTGTATTATTTCTTTGTTG+TGG - chr3_2:78947815-78947834 Msa0428150:CDS 25.0%
! AAACAGTGTATAAATAAGCT+AGG - chr3_2:78947895-78947914 Msa0428150:CDS 25.0%
!!! CATTGCATACATTTTTTTGT+TGG - chr3_2:78948059-78948078 Msa0428150:intron 25.0%
! AGATAAATAGATAACATCCA+AGG + chr3_2:78948128-78948147 None:intergenic 25.0%
! TCAGTCAATCATTAATACTA+GGG + chr3_2:78948303-78948322 None:intergenic 25.0%
! ATCAGTCAATCATTAATACT+AGG + chr3_2:78948304-78948323 None:intergenic 25.0%
! AATGAGTGATGAATATGATT+CGG - chr3_2:78948949-78948968 Msa0428150:intron 25.0%
! ATGAATCATGCTAAAACAAA+GGG - chr3_2:78949148-78949167 Msa0428150:intron 25.0%
! TAAAACAAAGGGTTCAAAAA+GGG - chr3_2:78949159-78949178 Msa0428150:intron 25.0%
! TGAACAAGATGAAAATGATA+AGG - chr3_2:78949351-78949370 Msa0428150:CDS 25.0%
!! TCTTTATTTGAAGAACAAGA+TGG - chr3_2:78950066-78950085 Msa0428150:CDS 25.0%
! TGTCCGTATAAAATTATTTG+TGG - chr3_2:78950287-78950306 Msa0428150:CDS 25.0%
! ATATTTGTGTAGTTCATGAA+TGG - chr3_2:78950377-78950396 Msa0428150:CDS 25.0%
! TCTTAGAAAGATTTGGATTT+GGG - chr3_2:78950607-78950626 Msa0428150:CDS 25.0%
! CAAGAGAAAAGAGATAAAAT+GGG + chr3_2:78950781-78950800 None:intergenic 25.0%
! TCAAGAGAAAAGAGATAAAA+TGG + chr3_2:78950782-78950801 None:intergenic 25.0%
! TTAAGACAAGAAACCTATAA+GGG + chr3_2:78950855-78950874 None:intergenic 25.0%
!! TTTAAGACAAGAAACCTATA+AGG + chr3_2:78950856-78950875 None:intergenic 25.0%
! AGATCAAATTCATTGCAATT+CGG + chr3_2:78951382-78951401 None:intergenic 25.0%
! AACTCGCAATTTGTAAAAAT+AGG + chr3_2:78951821-78951840 None:intergenic 25.0%
AACTGATGAAACGTGAAATT+CGG + chr3_2:78947466-78947485 None:intergenic 30.0%
!!! TTGTTACCCACATTGTTTTT+TGG - chr3_2:78947673-78947692 Msa0428150:three_prime_UTR 30.0%
CATCATCCAAAAAACAATGT+GGG + chr3_2:78947682-78947701 None:intergenic 30.0%
TCATCATCCAAAAAACAATG+TGG + chr3_2:78947683-78947702 None:intergenic 30.0%
ATTGTGTTGAGATTTAACCT+TGG - chr3_2:78948108-78948127 Msa0428150:intron 30.0%
! ATGCCGTTTATTTGAGTATA+TGG - chr3_2:78948193-78948212 Msa0428150:intron 30.0%
! TGCCGTTTATTTGAGTATAT+GGG - chr3_2:78948194-78948213 Msa0428150:intron 30.0%
CACCCATATACTCAAATAAA+CGG + chr3_2:78948199-78948218 None:intergenic 30.0%
GTTTATTTGAGTATATGGGT+GGG - chr3_2:78948198-78948217 Msa0428150:intron 30.0%
TAAAAGTAATGATCCTGAAC+AGG - chr3_2:78948323-78948342 Msa0428150:CDS 30.0%
AAAAGTAATGATCCTGAACA+GGG - chr3_2:78948324-78948343 Msa0428150:CDS 30.0%
! AATGATGATTTTCAGTCCAA+GGG - chr3_2:78948398-78948417 Msa0428150:CDS 30.0%
TCAAAGAAATCGAAAAACAG+AGG - chr3_2:78948524-78948543 Msa0428150:intron 30.0%
CAAAAAGTTCTTCCAGAATT+TGG - chr3_2:78949018-78949037 Msa0428150:intron 30.0%
CATTTATCTGATCAATAGTC+AGG + chr3_2:78949048-78949067 None:intergenic 30.0%
!!! TGTTTTAGCATGATTCATCA+GGG + chr3_2:78949146-78949165 None:intergenic 30.0%
!!! TTGTTTTAGCATGATTCATC+AGG + chr3_2:78949147-78949166 None:intergenic 30.0%
GATGAATCATGCTAAAACAA+AGG - chr3_2:78949147-78949166 Msa0428150:intron 30.0%
CTAAAACAAAGGGTTCAAAA+AGG - chr3_2:78949158-78949177 Msa0428150:intron 30.0%
AGGTTTAAAAGAAGAAGAGA+AGG - chr3_2:78949279-78949298 Msa0428150:CDS 30.0%
AGAAGGATCATGAAATTGTT+TGG - chr3_2:78949296-78949315 Msa0428150:CDS 30.0%
! TTCTTATTTGCATCAAATGC+TGG - chr3_2:78949385-78949404 Msa0428150:CDS 30.0%
!!! GTTTTGTTTATTTAGTGGAC+AGG - chr3_2:78949514-78949533 Msa0428150:intron 30.0%
! TTTATTTAGTGGACAGGTAT+GGG - chr3_2:78949520-78949539 Msa0428150:intron 30.0%
TAAAATAGTCAAGAAGCTCT+TGG + chr3_2:78949549-78949568 None:intergenic 30.0%
!!! TGACTATTTTAGCTCTTATG+CGG - chr3_2:78949558-78949577 Msa0428150:intron 30.0%
GGAGAAACAAATTGTATCTT+CGG + chr3_2:78949738-78949757 None:intergenic 30.0%
ATACTTTACTTCCATCATTC+TGG + chr3_2:78949918-78949937 None:intergenic 30.0%
AGAATCAGATTAAAAGAGAG+AGG + chr3_2:78949954-78949973 None:intergenic 30.0%
! CTCTTTTAATCTGATTCTGT+AGG - chr3_2:78949956-78949975 Msa0428150:intron 30.0%
TCTTCAAATAAAGAAGTTGC+TGG + chr3_2:78950060-78950079 None:intergenic 30.0%
GCATGAAGAAATAAAAGAAG+AGG - chr3_2:78950201-78950220 Msa0428150:CDS 30.0%
CACATTACTTGAAGCATATT+AGG - chr3_2:78950240-78950259 Msa0428150:CDS 30.0%
! ATCAAGTTTGAGTTAGGATA+TGG - chr3_2:78950313-78950332 Msa0428150:CDS 30.0%
GTCTTAGAAAGATTTGGATT+TGG - chr3_2:78950606-78950625 Msa0428150:CDS 30.0%
!! GTACTTATGTTTTGTTGTAG+AGG - chr3_2:78950634-78950653 Msa0428150:CDS 30.0%
! AAACTGGTTCATCAATAGTA+TGG + chr3_2:78950666-78950685 None:intergenic 30.0%
! ACAACTTATCTGAAATTACC+AGG + chr3_2:78950731-78950750 None:intergenic 30.0%
TAAAAGAAATGCAAAGGAAG+AGG - chr3_2:78951000-78951019 Msa0428150:CDS 30.0%
AACTAGTGTCATGTGAAATT+AGG + chr3_2:78951256-78951275 None:intergenic 30.0%
TGCAATGAATTTGATCTCTT+TGG - chr3_2:78951385-78951404 Msa0428150:intron 30.0%
AATTTGATCTCTTTGGATGT+AGG - chr3_2:78951392-78951411 Msa0428150:intron 30.0%
ATTTGATCTCTTTGGATGTA+GGG - chr3_2:78951393-78951412 Msa0428150:intron 30.0%
CAAAAAACCTAATGTTTCAG+CGG + chr3_2:78951711-78951730 None:intergenic 30.0%
! AAATTGAGAATTTGGAACTC+AGG - chr3_2:78951731-78951750 Msa0428150:intron 30.0%
ATTCGGGACAAAATGCAAAA+TGG + chr3_2:78947449-78947468 None:intergenic 35.0%
ACTGATGAAACGTGAAATTC+GGG + chr3_2:78947465-78947484 None:intergenic 35.0%
GAATTTCACGTTTCATCAGT+TGG - chr3_2:78947465-78947484 Msa0428150:three_prime_UTR 35.0%
GATGATTCTGTGTTCAAAGA+TGG - chr3_2:78947698-78947717 Msa0428150:three_prime_UTR 35.0%
!!! CATTTTTTTGTTGGCTGTGT+TGG - chr3_2:78948068-78948087 Msa0428150:intron 35.0%
ATCTCAACACAATGCTACAT+AGG + chr3_2:78948101-78948120 None:intergenic 35.0%
CGTTTATTTGAGTATATGGG+TGG - chr3_2:78948197-78948216 Msa0428150:intron 35.0%
! CAATGATGATTTTCAGTCCA+AGG - chr3_2:78948397-78948416 Msa0428150:CDS 35.0%
GGTATTGCTGATGTTAACTT+AGG - chr3_2:78948467-78948486 Msa0428150:intron 35.0%
TTCTTTGAATAAGTCTCCCA+TGG + chr3_2:78948512-78948531 None:intergenic 35.0%
AAGAAATCGAAAAACAGAGG+TGG - chr3_2:78948527-78948546 Msa0428150:intron 35.0%
AAGGAATGAAATTGTACCAG+AGG - chr3_2:78948835-78948854 Msa0428150:intron 35.0%
GAGTTTGAACAGAAGAATGA+TGG - chr3_2:78948857-78948876 Msa0428150:intron 35.0%
! AGAAGAAGATGATGATGATG+AGG - chr3_2:78948880-78948899 Msa0428150:intron 35.0%
TAGTCAGGTTATCCAAATTC+TGG + chr3_2:78949033-78949052 None:intergenic 35.0%
!! GTTTTAGCATGATTCATCAG+GGG + chr3_2:78949145-78949164 None:intergenic 35.0%
! GAAGCATTTGGTAAATGGAA+AGG - chr3_2:78949259-78949278 Msa0428150:CDS 35.0%
TAACAATCCTAGAACATTGC+TGG - chr3_2:78949468-78949487 Msa0428150:intron 35.0%
ACTAAATCCAGCAATGTTCT+AGG + chr3_2:78949478-78949497 None:intergenic 35.0%
! GTTTATTTAGTGGACAGGTA+TGG - chr3_2:78949519-78949538 Msa0428150:intron 35.0%
AAGGAACTAATAGAGAAGCT+TGG - chr3_2:78949701-78949720 Msa0428150:CDS 35.0%
! AGATACAATTTGTTTCTCCC+TGG - chr3_2:78949739-78949758 Msa0428150:CDS 35.0%
TAACTGAAGAGAATGAACCT+TGG + chr3_2:78949831-78949850 None:intergenic 35.0%
CAAGACTCAAGTATGAAATG+AGG - chr3_2:78949984-78950003 Msa0428150:intron 35.0%
GAAACATTCAAAAGCTCTTG+AGG - chr3_2:78950099-78950118 Msa0428150:CDS 35.0%
! TGGACAATCAAGTTTGAGTT+AGG - chr3_2:78950307-78950326 Msa0428150:CDS 35.0%
! CACACAAATCACATTTTTGC+AGG + chr3_2:78950460-78950479 None:intergenic 35.0%
TGCAGCATCTAAACATTTCA+TGG + chr3_2:78950554-78950573 None:intergenic 35.0%
AGCAGAGTCTTAGAAAGATT+TGG - chr3_2:78950600-78950619 Msa0428150:CDS 35.0%
AATTTCTCTATCATGTGTCC+TGG - chr3_2:78950710-78950729 Msa0428150:CDS 35.0%
ACATCTTCCATCAAGTAACA+GGG + chr3_2:78950934-78950953 None:intergenic 35.0%
TACATCTTCCATCAAGTAAC+AGG + chr3_2:78950935-78950954 None:intergenic 35.0%
TGAACAAGAACGATTCTTCA+AGG - chr3_2:78950955-78950974 Msa0428150:CDS 35.0%
AAGAACGATTCTTCAAGGAA+CGG - chr3_2:78950960-78950979 Msa0428150:CDS 35.0%
! CCTTTGCATTTCTTTTATCG+TGG + chr3_2:78950997-78951016 None:intergenic 35.0%
CCACGATAAAAGAAATGCAA+AGG - chr3_2:78950994-78951013 Msa0428150:CDS 35.0%
! AAATGCACTAGCTTGTAATG+TGG + chr3_2:78951176-78951195 None:intergenic 35.0%
! TCACATGACACTAGTTTAGA+TGG - chr3_2:78951205-78951224 Msa0428150:intron 35.0%
! CTTGGAGTTCGACAAATTTT+AGG + chr3_2:78951429-78951448 None:intergenic 35.0%
!! ACTTTTTCTACTGGTGAGAT+GGG + chr3_2:78951606-78951625 None:intergenic 35.0%
AGGTGCATGTTTATAAACAC+AGG - chr3_2:78951658-78951677 Msa0428150:intron 35.0%
ATGAATACCGCTGAAACATT+AGG - chr3_2:78951701-78951720 Msa0428150:intron 35.0%
AAGATCGGCTGAAGAAAAGT+CGG + chr3_2:78947559-78947578 None:intergenic 40.0%
TATTTGAGTATATGGGTGGG+TGG - chr3_2:78948201-78948220 Msa0428150:intron 40.0%
ACAAGAATGAGTTCCAGAAG+AGG - chr3_2:78948350-78948369 Msa0428150:CDS 40.0%
! GATTTTCAGTCCAAGGGAAA+AGG - chr3_2:78948404-78948423 Msa0428150:CDS 40.0%
! TTGAGATACACCTTTTCCCT+TGG + chr3_2:78948417-78948436 None:intergenic 40.0%
GCTGATGTTAACTTAGGATC+TGG - chr3_2:78948473-78948492 Msa0428150:intron 40.0%
TGTTAACTTAGGATCTGGAC+AGG - chr3_2:78948478-78948497 Msa0428150:intron 40.0%
AAATCGAAAAACAGAGGTGG+TGG - chr3_2:78948530-78948549 Msa0428150:intron 40.0%
!! TGCTCTAGGATTAGAACCAT+GGG + chr3_2:78948588-78948607 None:intergenic 40.0%
!! ATGCTCTAGGATTAGAACCA+TGG + chr3_2:78948589-78948608 None:intergenic 40.0%
!! ATGGTTCTAATCCTAGAGCA+TGG - chr3_2:78948588-78948607 Msa0428150:intron 40.0%
!! TGGTTCTAATCCTAGAGCAT+GGG - chr3_2:78948589-78948608 Msa0428150:intron 40.0%
GGTCTCATATAACCAGCATT+TGG + chr3_2:78948695-78948714 None:intergenic 40.0%
ATTGTATCCATATCCACCAG+TGG + chr3_2:78948750-78948769 None:intergenic 40.0%
ACTGGAAATCAACTCATGCA+AGG - chr3_2:78948816-78948835 Msa0428150:intron 40.0%
TTCTTCTGTTCAAACTCCTC+TGG + chr3_2:78948854-78948873 None:intergenic 40.0%
! AGAAGATGATGATGATGAGG+AGG - chr3_2:78948883-78948902 Msa0428150:intron 40.0%
TAAATGAACCAGAGAGACAG+TGG - chr3_2:78949062-78949081 Msa0428150:intron 40.0%
AAAGGGTTCAAAAAGGGTGA+AGG - chr3_2:78949165-78949184 Msa0428150:intron 40.0%
AAAAAGGGTGAAGGTTCACA+GGG - chr3_2:78949174-78949193 Msa0428150:intron 40.0%
TTGATGAGGAATTGCGTAGA+AGG - chr3_2:78949212-78949231 Msa0428150:CDS 40.0%
TGATGAGGAATTGCGTAGAA+GGG - chr3_2:78949213-78949232 Msa0428150:CDS 40.0%
TGAAATTGTTTGGCCTCCAA+TGG - chr3_2:78949306-78949325 Msa0428150:CDS 40.0%
TTCTGAACCATAACCATTGG+AGG + chr3_2:78949322-78949341 None:intergenic 40.0%
! GTGTTCTGAACCATAACCAT+TGG + chr3_2:78949325-78949344 None:intergenic 40.0%
! TACAATTTGTTTCTCCCTGG+TGG - chr3_2:78949742-78949761 Msa0428150:CDS 40.0%
AGTTAACCAAGCCAGAATGA+TGG - chr3_2:78949904-78949923 Msa0428150:intron 40.0%
! TTACTTCCATCATTCTGGCT+TGG + chr3_2:78949913-78949932 None:intergenic 40.0%
CCTCACTCATTTGTCGAATT+TGG + chr3_2:78950033-78950052 None:intergenic 40.0%
CCAAATTCGACAAATGAGTG+AGG - chr3_2:78950030-78950049 Msa0428150:intron 40.0%
AAAGCTCTTGAGGAATCCTT+TGG - chr3_2:78950109-78950128 Msa0428150:CDS 40.0%
! AGTTAGGATATGGTTCTGCT+TGG - chr3_2:78950323-78950342 Msa0428150:CDS 40.0%
TCAGAGTGGAGGAGATTAAT+GGG + chr3_2:78950483-78950502 None:intergenic 40.0%
! TACTTTGAAAGTCAGAGTGG+AGG + chr3_2:78950494-78950513 None:intergenic 40.0%
! GTCTACTTTGAAAGTCAGAG+TGG + chr3_2:78950497-78950516 None:intergenic 40.0%
GAAACCTATAAGGGAGAATG+TGG + chr3_2:78950846-78950865 None:intergenic 40.0%
CCATCAAGTAACAGGGAAAA+TGG + chr3_2:78950927-78950946 None:intergenic 40.0%
!! CCATTTTCCCTGTTACTTGA+TGG - chr3_2:78950924-78950943 Msa0428150:CDS 40.0%
AAGGTGAAGAAGACAACTAC+TGG - chr3_2:78951055-78951074 Msa0428150:CDS 40.0%
! ACTAGCTTGTAATGTGGAGA+GGG + chr3_2:78951170-78951189 None:intergenic 40.0%
CGAACTCCAAGACAAAGAAA+TGG - chr3_2:78951438-78951457 Msa0428150:intron 40.0%
AGCTCTCCATTTCTTTGTCT+TGG + chr3_2:78951447-78951466 None:intergenic 40.0%
GATGGAGAAGAAGTTTGATG+AGG - chr3_2:78951552-78951571 Msa0428150:intron 40.0%
GAAGAAGTTTGATGAGGACT+TGG - chr3_2:78951558-78951577 Msa0428150:intron 40.0%
!! GGAGTACTTTTCCATGAGTT+TGG + chr3_2:78951584-78951603 None:intergenic 40.0%
! CTTTTTCTACTGGTGAGATG+GGG + chr3_2:78951605-78951624 None:intergenic 40.0%
!! GACTTTTTCTACTGGTGAGA+TGG + chr3_2:78951607-78951626 None:intergenic 40.0%
CACCAGTAGAAAAAGTCCAA+TGG - chr3_2:78951610-78951629 Msa0428150:intron 40.0%
!! GACCATTGGACTTTTTCTAC+TGG + chr3_2:78951615-78951634 None:intergenic 40.0%
GCATGTTTATAAACACAGGC+AGG - chr3_2:78951662-78951681 Msa0428150:intron 40.0%
AGTTGCATACCCTTGTGTAT+GGG - chr3_2:78951837-78951856 Msa0428150:intron 40.0%
TTCCCTTCCATTACCTCAAA+AGG - chr3_2:78951965-78951984 Msa0428150:five_prime_UTR 40.0%
TCCCTTCCATTACCTCAAAA+GGG - chr3_2:78951966-78951985 Msa0428150:five_prime_UTR 40.0%
!!! TCCCTTTTGAGGTAATGGAA+GGG + chr3_2:78951970-78951989 None:intergenic 40.0%
!!! ATCCCTTTTGAGGTAATGGA+AGG + chr3_2:78951971-78951990 None:intergenic 40.0%
CTGAAGAAAAGTCGGAGGAA+CGG + chr3_2:78947551-78947570 None:intergenic 45.0%
GAAACGAAAATCAGCGAGAG+TGG + chr3_2:78947605-78947624 None:intergenic 45.0%
AGAATGAGTTCCAGAAGAGG+TGG - chr3_2:78948353-78948372 Msa0428150:CDS 45.0%
TTAGGATCTGGACAGGATGA+TGG - chr3_2:78948485-78948504 Msa0428150:intron 45.0%
TAGGATCTGGACAGGATGAT+GGG - chr3_2:78948486-78948505 Msa0428150:intron 45.0%
!! AAAAACAGAGGTGGTGGAAG+CGG - chr3_2:78948536-78948555 Msa0428150:intron 45.0%
! GGTTCTAATCCTAGAGCATG+GGG - chr3_2:78948590-78948609 Msa0428150:intron 45.0%
ATGTGGAATAACAGTGGAGC+TGG - chr3_2:78948641-78948660 Msa0428150:intron 45.0%
TGTAGAGGAGGAGGAATGAT+GGG + chr3_2:78948785-78948804 None:intergenic 45.0%
ATCATTCCTCCTCCTCTACA+GGG - chr3_2:78948785-78948804 Msa0428150:intron 45.0%
! AGATGATGATGATGAGGAGG+AGG - chr3_2:78948886-78948905 Msa0428150:intron 45.0%
GTCAAAAGAGCCATGAGACA+CGG - chr3_2:78948978-78948997 Msa0428150:intron 45.0%
AGACACGGAAGAAGAGCAAA+TGG - chr3_2:78948993-78949012 Msa0428150:intron 45.0%
CTGTACCAATCAATAGCACC+AGG + chr3_2:78949112-78949131 None:intergenic 45.0%
!! GGTGCTATTGATTGGTACAG+AGG - chr3_2:78949112-78949131 Msa0428150:intron 45.0%
CAAAAAGGGTGAAGGTTCAC+AGG - chr3_2:78949173-78949192 Msa0428150:intron 45.0%
!! GCTTGCTGTACTTCTTGATG+AGG - chr3_2:78949198-78949217 Msa0428150:intron 45.0%
GATGAGGAATTGCGTAGAAG+GGG - chr3_2:78949214-78949233 Msa0428150:CDS 45.0%
!! CTGGGGAAGCATTTGGTAAA+TGG - chr3_2:78949254-78949273 Msa0428150:CDS 45.0%
TGTTTGGCCTCCAATGGTTA+TGG - chr3_2:78949312-78949331 Msa0428150:CDS 45.0%
! GTAAGAGCACGGCATTCATA+TGG - chr3_2:78949583-78949602 Msa0428150:intron 45.0%
! ATGTTTGAAGCCTCAGCTAG+TGG - chr3_2:78949637-78949656 Msa0428150:CDS 45.0%
! GACAAGCATTTTGCTGAGCA+AGG - chr3_2:78949682-78949701 Msa0428150:CDS 45.0%
TCGACAGCTCTTTGGATACA+TGG - chr3_2:78949768-78949787 Msa0428150:CDS 45.0%
!! TGGCTTGGTTAACTTGCAAC+TGG + chr3_2:78949898-78949917 None:intergenic 45.0%
GTATGAAATGAGGTCCTACC+AGG - chr3_2:78949994-78950013 Msa0428150:intron 45.0%
AATGAGGTCCTACCAGGAAA+TGG - chr3_2:78950000-78950019 Msa0428150:intron 45.0%
! TTTGGTGCACTACCATTTCC+TGG + chr3_2:78950015-78950034 None:intergenic 45.0%
CTTCTCGGTCACTATACCAA+AGG + chr3_2:78950128-78950147 None:intergenic 45.0%
CATTGTCTTTCGCAGCTTCT+CGG + chr3_2:78950143-78950162 None:intergenic 45.0%
GTCAGAGTGGAGGAGATTAA+TGG + chr3_2:78950484-78950503 None:intergenic 45.0%
CCTATAAGGGAGAATGTGGA+TGG + chr3_2:78950842-78950861 None:intergenic 45.0%
CCATCCACATTCTCCCTTAT+AGG - chr3_2:78950839-78950858 Msa0428150:CDS 45.0%
CAAAGGAAGAGGATTTCGAG+AGG - chr3_2:78951011-78951030 Msa0428150:CDS 45.0%
AGAGGGAGGTCATTAGTCAA+AGG + chr3_2:78951153-78951172 None:intergenic 45.0%
! CACTAGCTTGTAATGTGGAG+AGG + chr3_2:78951171-78951190 None:intergenic 45.0%
TGATCTCTTTGGATGTAGGG+TGG - chr3_2:78951396-78951415 Msa0428150:intron 45.0%
! GGAGAGCTTTGTCGAAGAAA+AGG - chr3_2:78951459-78951478 Msa0428150:intron 45.0%
AGCAGCAATGCTCTCTTCAT+GGG + chr3_2:78951500-78951519 None:intergenic 45.0%
TAGCAGCAATGCTCTCTTCA+TGG + chr3_2:78951501-78951520 None:intergenic 45.0%
GCATTGCTGCTATGAAGAAG+AGG - chr3_2:78951509-78951528 Msa0428150:intron 45.0%
!! TGCTATGAAGAAGAGGCACT+GGG - chr3_2:78951516-78951535 Msa0428150:intron 45.0%
AGTCCAATGGTCTCTTTCAG+TGG - chr3_2:78951623-78951642 Msa0428150:intron 45.0%
GTCCAATGGTCTCTTTCAGT+GGG - chr3_2:78951624-78951643 Msa0428150:intron 45.0%
TCCAATGGTCTCTTTCAGTG+GGG - chr3_2:78951625-78951644 Msa0428150:intron 45.0%
GAGTTGCATACCCTTGTGTA+TGG - chr3_2:78951836-78951855 Msa0428150:intron 45.0%
GTTGCATACCCTTGTGTATG+GGG - chr3_2:78951838-78951857 Msa0428150:intron 45.0%
CAATTGCACCCCATACACAA+GGG + chr3_2:78951849-78951868 None:intergenic 45.0%
GTCATCACTCTCGCTTTCTC+CGG - chr3_2:78947502-78947521 Msa0428150:three_prime_UTR 50.0%
AAGAAAAGTCGGAGGAACGG+AGG + chr3_2:78947548-78947567 None:intergenic 50.0%
ATCGGCTGAAGAAAAGTCGG+AGG + chr3_2:78947556-78947575 None:intergenic 50.0%
ACCGGTGATTCTGCGAAGAT+CGG + chr3_2:78947574-78947593 None:intergenic 50.0%
GCGAGAGTGGAAGGAATAAC+CGG + chr3_2:78947592-78947611 None:intergenic 50.0%
CGAAAATCAGCGAGAGTGGA+AGG + chr3_2:78947601-78947620 None:intergenic 50.0%
CATTCTTGTGCACCCTGTTC+AGG + chr3_2:78948339-78948358 None:intergenic 50.0%
TGAGTTCCAGAAGAGGTGGT+AGG - chr3_2:78948357-78948376 Msa0428150:CDS 50.0%
AAAGGACCTACCACCTCTTC+TGG + chr3_2:78948366-78948385 None:intergenic 50.0%
AGGTGGTAGGTCCTTTACTG+CGG - chr3_2:78948370-78948389 Msa0428150:CDS 50.0%
ATCATTGCCAGCCGCAGTAA+AGG + chr3_2:78948384-78948403 None:intergenic 50.0%
TGATCCCAAAACTGAGCAGC+TGG - chr3_2:78948439-78948458 Msa0428150:CDS 50.0%
! TGAGCCAGCTGCTCAGTTTT+GGG + chr3_2:78948446-78948465 None:intergenic 50.0%
! TTGAGCCAGCTGCTCAGTTT+TGG + chr3_2:78948447-78948466 None:intergenic 50.0%
! AAAACTGAGCAGCTGGCTCA+AGG - chr3_2:78948446-78948465 Msa0428150:CDS 50.0%
CTAGGATTAGAACCATGGGC+TGG + chr3_2:78948584-78948603 None:intergenic 50.0%
TCTGCATTTCCCCATGCTCT+AGG + chr3_2:78948602-78948621 None:intergenic 50.0%
AGCATGGGGAAATGCAGATG+TGG - chr3_2:78948604-78948623 Msa0428150:intron 50.0%
TGCAGATGTGGCTCAAAAGC+AGG - chr3_2:78948616-78948635 Msa0428150:intron 50.0%
GCAGATGTGGCTCAAAAGCA+GGG - chr3_2:78948617-78948636 Msa0428150:intron 50.0%
CAGGGCATGTGGAATAACAG+TGG - chr3_2:78948635-78948654 Msa0428150:intron 50.0%
TATATGAGACCCGCTGGTAG+AGG - chr3_2:78948704-78948723 Msa0428150:intron 50.0%
TATCCATATCCACCAGTGGC+TGG + chr3_2:78948746-78948765 None:intergenic 50.0%
CTGTAGAGGAGGAGGAATGA+TGG + chr3_2:78948786-78948805 None:intergenic 50.0%
CATCATTCCTCCTCCTCTAC+AGG - chr3_2:78948784-78948803 Msa0428150:intron 50.0%
! TGATGATGATGAGGAGGAGG+AGG - chr3_2:78948889-78948908 Msa0428150:intron 50.0%
TGCTCTTCTTCCGTGTCTCA+TGG + chr3_2:78948991-78949010 None:intergenic 50.0%
!! GTGGTCCTGGTGCTATTGAT+TGG - chr3_2:78949104-78949123 Msa0428150:intron 50.0%
TACCAAATGCTTCCCCAGCT+GGG + chr3_2:78949252-78949271 None:intergenic 50.0%
TTACCAAATGCTTCCCCAGC+TGG + chr3_2:78949253-78949272 None:intergenic 50.0%
CTTATGCGGCAGTAAGAGCA+CGG - chr3_2:78949572-78949591 Msa0428150:intron 50.0%
TCATCCCTCGATGACCTTGA+GGG + chr3_2:78949609-78949628 None:intergenic 50.0%
AGCCTCAGCTAGTGGTTATC+TGG - chr3_2:78949645-78949664 Msa0428150:CDS 50.0%
CTCCAGATAACCACTAGCTG+AGG + chr3_2:78949650-78949669 None:intergenic 50.0%
CTCAGCTAGTGGTTATCTGG+AGG - chr3_2:78949648-78949667 Msa0428150:CDS 50.0%
TTATCTGGAGGCAGAACGTC+TGG - chr3_2:78949660-78949679 Msa0428150:CDS 50.0%
CATGGCAACTAAAGACGACC+TGG - chr3_2:78949786-78949805 Msa0428150:CDS 50.0%
AATGCCTGTTGAAAGCCTCC+AGG + chr3_2:78949807-78949826 None:intergenic 50.0%
! GCTTTCAACAGGCATTGCCA+AGG - chr3_2:78949811-78949830 Msa0428150:CDS 50.0%
GTGCACTACCATTTCCTGGT+AGG + chr3_2:78950011-78950030 None:intergenic 50.0%
CGAGAAGCTGCGAAAGACAA+TGG - chr3_2:78950141-78950160 Msa0428150:CDS 50.0%
GAAGCTGCGAAAGACAATGG+AGG - chr3_2:78950144-78950163 Msa0428150:CDS 50.0%
TGGAGGAGAATCGCATTGTG+AGG - chr3_2:78950161-78950180 Msa0428150:CDS 50.0%
AGGAGAATCGCATTGTGAGG+CGG - chr3_2:78950164-78950183 Msa0428150:CDS 50.0%
TACTGGTCCTGCAAATGCAG+AGG - chr3_2:78951072-78951091 Msa0428150:intron 50.0%
CTGCAAATGCAGAGGAGGAA+CGG - chr3_2:78951080-78951099 Msa0428150:intron 50.0%
AGCTTGTAATGTGGAGAGGG+AGG + chr3_2:78951167-78951186 None:intergenic 50.0%
TCTCTTTGGATGTAGGGTGG+AGG - chr3_2:78951399-78951418 Msa0428150:intron 50.0%
CTCTTTGGATGTAGGGTGGA+GGG - chr3_2:78951400-78951419 Msa0428150:intron 50.0%
CAATGCTCTCTTCATGGGCT+TGG + chr3_2:78951495-78951514 None:intergenic 50.0%
! CTGCTATGAAGAAGAGGCAC+TGG - chr3_2:78951515-78951534 Msa0428150:intron 50.0%
!! TATGAAGAAGAGGCACTGGG+AGG - chr3_2:78951519-78951538 Msa0428150:intron 50.0%
TGAGGACTTGGCCAAACTCA+TGG - chr3_2:78951570-78951589 Msa0428150:intron 50.0%
CCAATGGTCTCTTTCAGTGG+GGG - chr3_2:78951626-78951645 Msa0428150:intron 50.0%
CAATGGTCTCTTTCAGTGGG+GGG - chr3_2:78951627-78951646 Msa0428150:intron 50.0%
!! TTCAGTGGGGGGTATTACAC+AGG - chr3_2:78951638-78951657 Msa0428150:intron 50.0%
GTATTGCTCCTTGACACTCG+CGG - chr3_2:78951770-78951789 Msa0428150:intron 50.0%
CCAATTGCACCCCATACACA+AGG + chr3_2:78951850-78951869 None:intergenic 50.0%
CCTTGTGTATGGGGTGCAAT+TGG - chr3_2:78951847-78951866 Msa0428150:five_prime_UTR 50.0%
!!! CGGCATCCCTTTTGAGGTAA+TGG + chr3_2:78951975-78951994 None:intergenic 50.0%
AAAAGTCGGAGGAACGGAGG+CGG + chr3_2:78947545-78947564 None:intergenic 55.0%
GCCGATCTTCGCAGAATCAC+CGG - chr3_2:78947570-78947589 Msa0428150:three_prime_UTR 55.0%
!! TGGACAGGATGATGGGCCAT+GGG - chr3_2:78948493-78948512 Msa0428150:intron 55.0%
!! GGATTAGAACCATGGGCTGG+AGG + chr3_2:78948581-78948600 None:intergenic 55.0%
TGGCTCAAAAGCAGGGCATG+TGG - chr3_2:78948624-78948643 Msa0428150:intron 55.0%
!! CAGCATTTGGTGTCTGCCAG+GGG + chr3_2:78948682-78948701 None:intergenic 55.0%
!! CCAGCATTTGGTGTCTGCCA+GGG + chr3_2:78948683-78948702 None:intergenic 55.0%
!! ACCAGCATTTGGTGTCTGCC+AGG + chr3_2:78948684-78948703 None:intergenic 55.0%
GCTGGTTATATGAGACCCGC+TGG - chr3_2:78948698-78948717 Msa0428150:intron 55.0%
CTTCCATTGCCTCTACCAGC+GGG + chr3_2:78948716-78948735 None:intergenic 55.0%
CCTTCCATTGCCTCTACCAG+CGG + chr3_2:78948717-78948736 None:intergenic 55.0%
! ATATCCACCAGTGGCTGGCT+GGG + chr3_2:78948741-78948760 None:intergenic 55.0%
ATTCCTCCTCCTCTACAGGG+TGG - chr3_2:78948788-78948807 Msa0428150:intron 55.0%
GGAGGACGACTGTGATGATC+TGG - chr3_2:78948907-78948926 Msa0428150:intron 55.0%
TGGCACTGTCCAGCTTGTCA+AGG - chr3_2:78949082-78949101 Msa0428150:intron 55.0%
CACTGTCCAGCTTGTCAAGG+TGG - chr3_2:78949085-78949104 Msa0428150:intron 55.0%
GCACTACAGTAGTCCCAGCT+GGG - chr3_2:78949236-78949255 Msa0428150:CDS 55.0%
CACTACAGTAGTCCCAGCTG+GGG - chr3_2:78949237-78949256 Msa0428150:CDS 55.0%
CGGCATTCATATGGCCCTCA+AGG - chr3_2:78949592-78949611 Msa0428150:intron 55.0%
TATGGCCCTCAAGGTCATCG+AGG - chr3_2:78949601-78949620 Msa0428150:CDS 55.0%
ATGGCCCTCAAGGTCATCGA+GGG - chr3_2:78949602-78949621 Msa0428150:CDS 55.0%
CTCATCCCTCGATGACCTTG+AGG + chr3_2:78949610-78949629 None:intergenic 55.0%
! AGAGCTGTCGATTGCCACCA+GGG + chr3_2:78949759-78949778 None:intergenic 55.0%
! AAGAGCTGTCGATTGCCACC+AGG + chr3_2:78949760-78949779 None:intergenic 55.0%
GGTGGCAATCGACAGCTCTT+TGG - chr3_2:78949760-78949779 Msa0428150:CDS 55.0%
GGCAACTAAAGACGACCTGG+AGG - chr3_2:78949789-78949808 Msa0428150:CDS 55.0%
ACGACCTGGAGGCTTTCAAC+AGG - chr3_2:78949800-78949819 Msa0428150:CDS 55.0%
GGATTTCGAGAGGATGCAGC+AGG - chr3_2:78951021-78951040 Msa0428150:CDS 55.0%
TGGTCCTGCAAATGCAGAGG+AGG - chr3_2:78951075-78951094 Msa0428150:intron 55.0%
CGTTCCTCCTCTGCATTTGC+AGG + chr3_2:78951082-78951101 None:intergenic 55.0%
CCCCCACTGAAAGAGACCAT+TGG + chr3_2:78951629-78951648 None:intergenic 55.0%
TTGCAACACCGCGAGTGTCA+AGG + chr3_2:78951781-78951800 None:intergenic 55.0%
!! TTGACACTCGCGGTGTTGCA+AGG - chr3_2:78951780-78951799 Msa0428150:intron 55.0%
GGTAGGTCCTTTACTGCGGC+TGG - chr3_2:78948374-78948393 Msa0428150:CDS 60.0%
!! CTGGACAGGATGATGGGCCA+TGG - chr3_2:78948492-78948511 Msa0428150:intron 60.0%
!! GAAGCGGTGCTGCCAAACAG+CGG - chr3_2:78948552-78948571 Msa0428150:intron 60.0%
!! AAGCGGTGCTGCCAAACAGC+GGG - chr3_2:78948553-78948572 Msa0428150:intron 60.0%
AGTGGAGCTGGAAGAGCTGC+TGG - chr3_2:78948653-78948672 Msa0428150:intron 60.0%
GAAGAGCTGCTGGAAACCCC+TGG - chr3_2:78948663-78948682 Msa0428150:intron 60.0%
CCCTGGCAGACACCAAATGC+TGG - chr3_2:78948680-78948699 Msa0428150:intron 60.0%
AGACCCGCTGGTAGAGGCAA+TGG - chr3_2:78948710-78948729 Msa0428150:intron 60.0%
CCGCTGGTAGAGGCAATGGA+AGG - chr3_2:78948714-78948733 Msa0428150:intron 60.0%
! TATCCACCAGTGGCTGGCTG+GGG + chr3_2:78948740-78948759 None:intergenic 60.0%
CATATCCACCAGTGGCTGGC+TGG + chr3_2:78948742-78948761 None:intergenic 60.0%
! CAGCCAGCCACTGGTGGATA+TGG - chr3_2:78948740-78948759 Msa0428150:intron 60.0%
TTCCAGCCACCCTGTAGAGG+AGG + chr3_2:78948797-78948816 None:intergenic 60.0%
CAGTTCCAGCCACCCTGTAG+AGG + chr3_2:78948800-78948819 None:intergenic 60.0%
CTCTACAGGGTGGCTGGAAC+TGG - chr3_2:78948798-78948817 Msa0428150:intron 60.0%
! GGACAGTGCCACTGTCTCTC+TGG + chr3_2:78949073-78949092 None:intergenic 60.0%
CCAGGACCACCTTGACAAGC+TGG + chr3_2:78949094-78949113 None:intergenic 60.0%
CCAGCTTGTCAAGGTGGTCC+TGG - chr3_2:78949091-78949110 Msa0428150:intron 60.0%
GGCACTACAGTAGTCCCAGC+TGG - chr3_2:78949235-78949254 Msa0428150:CDS 60.0%
!! GTCCCAGCTGGGGAAGCATT+TGG - chr3_2:78949247-78949266 Msa0428150:CDS 60.0%
! GCAGCAGGAAGAGCGTGAGA+AGG - chr3_2:78951036-78951055 Msa0428150:CDS 60.0%
!! GAAGAGGCACTGGGAGGAAG+AGG - chr3_2:78951525-78951544 Msa0428150:intron 60.0%
CTGGGAGGAAGAGGTGGAGA+TGG - chr3_2:78951534-78951553 Msa0428150:intron 60.0%
GGTTGAGAGCTACGCGCTGC+CGG + chr3_2:78947524-78947543 None:intergenic 65.0%
!! AGCGGTGCTGCCAAACAGCG+GGG - chr3_2:78948554-78948573 Msa0428150:intron 65.0%
CAGCCACCCTGTAGAGGAGG+AGG + chr3_2:78948794-78948813 None:intergenic 65.0%
CTCCTCCTCTACAGGGTGGC+TGG - chr3_2:78948792-78948811 Msa0428150:intron 65.0%
!! GAGGCACTGGGAGGAAGAGG+TGG - chr3_2:78951528-78951547 Msa0428150:intron 65.0%
GGCTGGAGGACCCCGCTGTT+TGG + chr3_2:78948567-78948586 None:intergenic 70.0%
CAGCGGGGTCCTCCAGCCCA+TGG - chr3_2:78948569-78948588 Msa0428150:intron 75.0%
GGAAGGCCCCAGCCAGCCAC+TGG - chr3_2:78948731-78948750 Msa0428150:intron 75.0%
AGGCCCCAGCCAGCCACTGG+TGG - chr3_2:78948734-78948753 Msa0428150:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 78947437 78951995 78947437 ID=Msa0428150;Name=Msa0428150
chr3_2 mRNA 78947437 78951995 78947437 ID=Msa0428150-mRNA-1;Parent=Msa0428150;Name=Msa0428150-mRNA-1;_AED=0.28;_eAED=0.28;_QI=166|1|1|1|0.8|0.66|6|377|643
chr3_2 exon 78947437 78948018 78947437 ID=Msa0428150-mRNA-1:exon:21136;Parent=Msa0428150-mRNA-1
chr3_2 exon 78948322 78948482 78948322 ID=Msa0428150-mRNA-1:exon:21135;Parent=Msa0428150-mRNA-1
chr3_2 exon 78949210 78949454 78949210 ID=Msa0428150-mRNA-1:exon:21134;Parent=Msa0428150-mRNA-1
chr3_2 exon 78949600 78949903 78949600 ID=Msa0428150-mRNA-1:exon:21133;Parent=Msa0428150-mRNA-1
chr3_2 exon 78950060 78951087 78950060 ID=Msa0428150-mRNA-1:exon:21132;Parent=Msa0428150-mRNA-1
chr3_2 exon 78951841 78951995 78951841 ID=Msa0428150-mRNA-1:exon:21131;Parent=Msa0428150-mRNA-1
chr3_2 five_prime_UTR 78951841 78951995 78951841 ID=Msa0428150-mRNA-1:five_prime_utr;Parent=Msa0428150-mRNA-1
chr3_2 five_prime_UTR 78951077 78951087 78951077 ID=Msa0428150-mRNA-1:five_prime_utr;Parent=Msa0428150-mRNA-1
chr3_2 CDS 78950060 78951076 78950060 ID=Msa0428150-mRNA-1:cds;Parent=Msa0428150-mRNA-1
chr3_2 CDS 78949600 78949903 78949600 ID=Msa0428150-mRNA-1:cds;Parent=Msa0428150-mRNA-1
chr3_2 CDS 78949210 78949454 78949210 ID=Msa0428150-mRNA-1:cds;Parent=Msa0428150-mRNA-1
chr3_2 CDS 78948322 78948482 78948322 ID=Msa0428150-mRNA-1:cds;Parent=Msa0428150-mRNA-1
chr3_2 CDS 78947814 78948018 78947814 ID=Msa0428150-mRNA-1:cds;Parent=Msa0428150-mRNA-1
chr3_2 three_prime_UTR 78947437 78947813 78947437 ID=Msa0428150-mRNA-1:three_prime_utr;Parent=Msa0428150-mRNA-1
Gene Sequence

>Msa0428150

ATGAGTTCCAGAAGAGGTGGTAGGTCCTTTACTGCGGCTGGCAATGATGATTTTCAGTCCAAGGGAAAAGGTGTATCTCAATTTGATCCCAAAACTGAGCAGCTGGCTCAAGGTATTGCTGATGTTAACTTAGGATCTGGACAGGATGATGGGCCATGGGAGACTTATTCAAAGAAATCGAAAAACAGAGGTGGTGGAAGCGGTGCTGCCAAACAGCGGGGTCCTCCAGCCCATGGTTCTAATCCTAGAGCATGGGGAAATGCAGATGTGGCTCAAAAGCAGGGCATGTGGAATAACAGTGGAGCTGGAAGAGCTGCTGGAAACCCCTGGCAGACACCAAATGCTGGTTATATGAGACCCGCTGGTAGAGGCAATGGAAGGCCCCAGCCAGCCACTGGTGGATATGGATACAATGTGACTTCTAATCCCATCATTCCTCCTCCTCTACAGGGTGGCTGGAACTGGAAATCAACTCATGCAAGGAATGAAATTGTACCAGAGGAGTTTGAACAGAAGAATGATGGAGAAGAAGATGATGATGATGAGGAGGAGGAGGACGACTGTGATGATCTGGAAGATACTGATGATGATCTAATGAGTGATGAATATGATTCGGATGTGAGTCAAAAGAGCCATGAGACACGGAAGAAGAGCAAATGGTTCAAAAAGTTCTTCCAGAATTTGGATAACCTGACTATTGATCAGATAAATGAACCAGAGAGACAGTGGCACTGTCCAGCTTGTCAAGGTGGTCCTGGTGCTATTGATTGGTACAGAGGTCTGCAGCCCCTGATGAATCATGCTAAAACAAAGGGTTCAAAAAGGGTGAAGGTTCACAGGGAGCTTGCTGTACTTCTTGATGAGGAATTGCGTAGAAGGGGCACTACAGTAGTCCCAGCTGGGGAAGCATTTGGTAAATGGAAAGGTTTAAAAGAAGAAGAGAAGGATCATGAAATTGTTTGGCCTCCAATGGTTATGGTTCAGAACACGCAGCTTGAACAAGATGAAAATGATAAGTGGACAGGTATGGGCAACCAAGAGCTTCTTGACTATTTTAGCTCTTATGCGGCAGTAAGAGCACGGCATTCATATGGCCCTCAAGGTCATCGAGGGATGAGTGTTTTGATGTTTGAAGCCTCAGCTAGTGGTTATCTGGAGGCAGAACGTCTGGACAAGCATTTTGCTGAGCAAGGAACTAATAGAGAAGCTTGGTTTAGCAATCGCCGAAGATACAATTTGTTTCTCCCTGGTGGCAATCGACAGCTCTTTGGATACATGGCAACTAAAGACGACCTGGAGGCTTTCAACAGGCATTGCCAAGGTAAAACAAGACTCAAGTATGAAATGAGGTCCTACCAGGAAATGGTAGTGCACCAAATTCGACAAATGAGTGAGGACAACCAGCAACTTCTTTATTTGAAGAACAAGATGGACAAAGAGAAGAAACATTCAAAAGCTCTTGAGGAATCCTTTGGTATAGTGACCGAGAAGCTGCGAAAGACAATGGAGGAGAATCGCATTGTGAGGCGGAGAACAAAAATGCAGCATGAAGAAATAAAAGAAGAGATGTATGAACAAGAACGATTCTTCAAGGAACGGATCAGTAGCATCCACGATAAAAGAAATGCAAAGGAAGAGGATTTCGAGAGGATGCAGCAGGAAGAGCGTGAGAAGGTGAAGAAGACAACTACTGGTCCTGCAAATGCAGAGGAGGAACGGCGACTCAAGGTGGAGGGATACCTAAAATTTGTCGAACTCCAAGACAAAGAAATGGAGAGCTTTGTCGAAGAAAAGGAGAAGCTCAGCCAAGCCCATGAAGAGAGCATTGCTGCTATGAAGAAGAGGCACTGGGAGGAAGAGGTGGAGATGGAGAAGAAGTTTGATGAGGACTTGGCCAAACTCATGGAAAAGTACTCCCCATCTCACCAGTAG
Protein sequence

>Msa0428150

MSSRRGGRSFTAAGNDDFQSKGKGVSQFDPKTEQLAQGIADVNLGSGQDDGPWETYSKKSKNRGGGSGAAKQRGPPAHGSNPRAWGNADVAQKQGMWNNSGAGRAAGNPWQTPNAGYMRPAGRGNGRPQPATGGYGYNVTSNPIIPPPLQGGWNWKSTHARNEIVPEEFEQKNDGEEDDDDEEEEDDCDDLEDTDDDLMSDEYDSDVSQKSHETRKKSKWFKKFFQNLDNLTIDQINEPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKVHRELAVLLDEELRRRGTTVVPAGEAFGKWKGLKEEEKDHEIVWPPMVMVQNTQLEQDENDKWTGMGNQELLDYFSSYAAVRARHSYGPQGHRGMSVLMFEASASGYLEAERLDKHFAEQGTNREAWFSNRRRYNLFLPGGNRQLFGYMATKDDLEAFNRHCQGKTRLKYEMRSYQEMVVHQIRQMSEDNQQLLYLKNKMDKEKKHSKALEESFGIVTEKLRKTMEENRIVRRRTKMQHEEIKEEMYEQERFFKERISSIHDKRNAKEEDFERMQQEEREKVKKTTTGPANAEEERRLKVEGYLKFVELQDKEMESFVEEKEKLSQAHEESIAAMKKRHWEEEVEMEKKFDEDLAKLMEKYSPSHQ*