AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0934310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934310 MtrunA17_Chr4g0058081 37.712 236 135 6 45 278 118 343 3.66e-45 160
Msa0934310 MtrunA17_Chr4g0041521 36.100 241 144 5 39 278 108 339 6.83e-44 156
Msa0934310 MtrunA17_Chr4g0041481 36.100 241 144 5 39 278 108 339 1.08e-43 156
Msa0934310 MtrunA17_Chr4g0053311 38.696 230 128 8 55 281 125 344 2.33e-41 150
Msa0934310 MtrunA17_Chr1g0208261 38.462 234 131 8 51 281 175 398 2.73e-41 153
Msa0934310 MtrunA17_Chr3g0116551 36.709 237 137 7 45 278 118 344 2.17e-40 147
Msa0934310 MtrunA17_Chr4g0041471 36.364 231 134 7 51 278 121 341 4.40e-40 146
Msa0934310 MtrunA17_Chr4g0060251 35.931 231 136 7 51 278 123 344 1.15e-39 145
Msa0934310 MtrunA17_Chr4g0024411 35.498 231 137 7 51 278 121 342 1.44e-39 145
Msa0934310 MtrunA17_Chr5g0405751 35.498 231 137 7 51 278 122 343 2.82e-39 144
Msa0934310 MtrunA17_Chr2g0319991 36.638 232 135 7 51 279 122 344 4.77e-39 144
Msa0934310 MtrunA17_Chr4g0040881 35.371 229 136 7 53 278 125 344 1.18e-38 142
Msa0934310 MtrunA17_Chr3g0134231 37.391 230 131 8 55 281 145 364 1.27e-38 145
Msa0934310 MtrunA17_Chr2g0325121 37.004 227 132 5 54 278 119 336 1.37e-38 142
Msa0934310 MtrunA17_Chr3g0142071 36.626 243 137 8 38 278 128 355 1.92e-38 144
Msa0934310 MtrunA17_Chr4g0041061 35.371 229 136 7 53 278 125 344 2.14e-38 142
Msa0934310 MtrunA17_Chr4g0040851 35.371 229 135 6 54 279 142 360 2.71e-38 142
Msa0934310 MtrunA17_Chr2g0311381 40.179 224 113 7 49 263 130 341 3.31e-38 141
Msa0934310 MtrunA17_Chr4g0041081 34.498 229 138 7 53 278 125 344 9.59e-38 140
Msa0934310 MtrunA17_Chr3g0144281 34.752 282 163 12 2 278 82 347 1.95e-37 139
Msa0934310 MtrunA17_Chr2g0315491 34.348 230 141 6 51 278 119 340 2.13e-37 139
Msa0934310 MtrunA17_Chr7g0248391 36.170 235 137 7 51 283 119 342 2.53e-37 139
Msa0934310 MtrunA17_Chr2g0283671 38.596 228 126 7 54 279 13 228 5.81e-36 132
Msa0934310 MtrunA17_Chr2g0283741 35.268 224 137 6 56 278 142 358 1.94e-35 134
Msa0934310 MtrunA17_Chr2g0311471 39.648 227 128 5 55 280 130 348 6.62e-35 132
Msa0934310 MtrunA17_Chr1g0153011 37.391 230 131 8 55 281 126 345 6.91e-35 134
Msa0934310 MtrunA17_Chr7g0248811 36.245 229 133 7 51 277 117 334 1.38e-34 131
Msa0934310 MtrunA17_Chr2g0283901 36.245 229 135 6 54 280 138 357 2.56e-32 128
Msa0934310 MtrunA17_Chr2g0311391 35.526 228 127 8 55 276 155 368 3.79e-31 122
Msa0934310 MtrunA17_Chr8g0379151 35.043 234 132 8 51 278 153 372 1.30e-29 118
Msa0934310 MtrunA17_Chr1g0156161 33.992 253 145 11 35 279 27 265 3.15e-28 112
Msa0934310 MtrunA17_Chr0c27g0493921 33.480 227 139 7 55 279 133 349 3.96e-28 114
Msa0934310 MtrunA17_Chr4g0070441 34.951 206 126 6 55 258 133 332 3.78e-27 111
Msa0934310 MtrunA17_Chr1g0155781 30.045 223 132 7 52 259 132 345 9.52e-23 99.0
Msa0934310 MtrunA17_Chr1g0199131 28.185 259 145 9 35 263 108 355 1.07e-21 96.3
Msa0934310 MtrunA17_Chr4g0035551 31.081 222 127 9 54 259 130 341 1.13e-19 90.1
Msa0934310 MtrunA17_Chr2g0283751 31.013 158 101 4 47 203 135 285 2.17e-18 85.1
Msa0934310 MtrunA17_Chr7g0248421 33.548 155 89 6 80 232 57 199 7.07e-16 76.3
Msa0934310 MtrunA17_Chr1g0156771 34.127 126 70 4 36 153 34 154 8.54e-14 68.9
Msa0934310 MtrunA17_Chr2g0283661 34.454 119 68 4 162 279 163 272 1.04e-12 68.2
Msa0934310 MtrunA17_Chr7g0248371 39.048 105 55 4 176 278 34 131 1.06e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934310 AT3G48340.1 40.870 230 124 6 51 278 124 343 2.31e-47 166
Msa0934310 AT3G43960.1 41.200 250 125 11 35 278 113 346 5.76e-43 155
Msa0934310 AT5G50260.1 36.140 285 148 11 18 278 68 342 6.70e-42 152
Msa0934310 AT3G19400.1 37.860 243 132 8 39 277 120 347 1.05e-41 151
Msa0934310 AT3G49340.1 37.826 230 129 7 51 278 123 340 3.09e-41 150
Msa0934310 AT3G48350.1 38.655 238 132 8 45 278 116 343 6.72e-41 149
Msa0934310 AT1G06260.1 35.798 257 153 5 24 278 96 342 2.78e-40 147
Msa0934310 AT4G11310.1 37.445 227 128 6 55 278 137 352 4.47e-40 147
Msa0934310 AT5G45890.1 38.158 228 127 8 55 279 130 346 5.57e-40 146
Msa0934310 AT4G11320.2 36.555 238 135 7 44 278 135 359 9.50e-40 146
Msa0934310 AT4G11320.1 36.555 238 135 7 44 278 135 359 9.50e-40 146
Msa0934310 AT5G43060.1 36.466 266 145 10 30 281 101 356 9.69e-40 148
Msa0934310 AT4G35350.1 38.696 230 129 8 51 278 133 352 4.74e-39 144
Msa0934310 AT1G20850.1 36.885 244 140 8 37 278 122 353 2.83e-38 142
Msa0934310 AT1G29090.1 38.362 232 129 8 51 278 133 354 2.95e-38 142
Msa0934310 AT4G36880.1 35.965 228 133 7 54 278 144 361 4.12e-38 142
Msa0934310 AT1G09850.1 34.767 279 169 8 2 278 66 333 4.67e-38 143
Msa0934310 AT2G27420.1 37.021 235 132 7 50 278 123 347 1.20e-37 140
Msa0934310 AT2G34080.1 36.797 231 132 8 51 278 125 344 3.92e-37 139
Msa0934310 AT1G29080.1 39.565 230 126 8 52 278 126 345 6.10e-37 138
Msa0934310 AT1G47128.1 36.179 246 143 8 38 281 122 355 1.30e-36 140
Msa0934310 AT3G19390.1 36.123 227 132 7 55 278 129 345 5.17e-35 135
Msa0934310 AT4G23520.1 35.526 228 132 8 55 278 133 349 2.47e-33 129
Msa0934310 AT1G29110.1 36.681 229 120 8 54 279 128 334 3.53e-32 125
Msa0934310 AT5G60360.1 33.186 226 141 5 55 279 141 357 4.12e-30 120
Msa0934310 AT5G60360.2 32.743 226 141 5 55 279 141 356 1.15e-29 119
Msa0934310 AT3G45310.1 32.018 228 145 5 53 279 139 357 2.41e-28 115
Msa0934310 AT3G45310.2 32.018 228 144 5 53 279 139 356 3.32e-28 114
Msa0934310 AT5G60360.3 34.146 205 129 4 55 258 141 340 3.37e-28 114
Msa0934310 AT3G19400.2 41.176 170 86 7 39 204 120 279 8.66e-28 112
Msa0934310 AT4G35350.2 40.741 162 88 7 51 210 133 288 2.11e-27 110
Msa0934310 AT3G48350.2 38.922 167 94 6 45 208 116 277 4.05e-25 104
Msa0934310 AT2G21430.1 31.364 220 125 8 54 257 131 340 1.48e-20 93.2
Msa0934310 AT4G39090.1 31.364 220 125 8 54 257 134 343 4.16e-20 91.7
Msa0934310 AT3G54940.2 28.139 231 139 8 51 263 133 354 2.38e-19 89.7
Msa0934310 AT4G16190.1 30.472 233 133 10 52 268 137 356 8.51e-19 88.2
Msa0934310 AT3G54940.3 30.263 152 94 4 51 194 133 280 6.47e-15 75.1
Msa0934310 AT1G02305.1 24.907 269 160 11 29 266 79 336 3.38e-13 71.2
Msa0934310 AT1G02300.1 26.718 262 142 11 47 263 94 350 2.62e-12 68.6

Find 159 sgRNAs with CRISPR-Local

Find 664 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACTTCATGAATTTAATT+TGG 0.087326 6_3:+4114569 Msa0934310:exon
ACCAATTATCGATTTGATTT+TGG 0.121131 6_3:+4104874 Msa0934310:five_prime_UTR
TTTGGGCATTGACAAATATT+TGG 0.161136 6_3:+4114587 Msa0934310:three_prime_UTR
ACCAAAATCAAATCGATAAT+TGG 0.189814 6_3:-4104875 None:intergenic
CTTATATTTATAAAATTCTT+TGG 0.206129 6_3:-4107551 None:intergenic
ATAATAATTATGTCTTCTTT+TGG 0.244960 6_3:+4104928 Msa0934310:five_prime_UTR
TTATCGTGGTCGCATTGTTC+AGG 0.276214 6_3:+4106614 Msa0934310:CDS
TGGAAAATTAAGAATACATA+TGG 0.280793 6_3:+4107676 Msa0934310:CDS
AACCGGATTTGCTCGGGTCT+TGG 0.285892 6_3:+4106503 Msa0934310:CDS
GTTAACGTCATCCATTAGTT+TGG 0.288918 6_3:-4103752 None:intergenic
ATAATAATAATGCCTTCTTT+TGG 0.302143 6_3:+4104061 Msa0934310:five_prime_UTR
CTACTTCATGAATTTAATTT+GGG 0.309550 6_3:+4114570 Msa0934310:three_prime_UTR
TTGCATAATGTTTGCATTGT+TGG 0.310030 6_3:+4107625 Msa0934310:CDS
ACAACCCCTCCTATGGAAAT+AGG 0.318008 6_3:-4103972 None:intergenic
ATCCCACCCAATCATCGATT+TGG 0.324684 6_3:+4104008 Msa0934310:five_prime_UTR
CCTCTTCCCTCTTGGAGAAT+AGG 0.329496 6_3:-4113457 None:intergenic
CTTGTCTCTTTACCCTTGTA+AGG 0.329562 6_3:-4107391 None:intergenic
ACTTAATTGTGTCAATAGTA+TGG 0.330623 6_3:-4107651 None:intergenic
CTATTGACACAATTAAGTTT+TGG 0.330726 6_3:+4107656 Msa0934310:CDS
AAGGCTTTCGACAGCATATA+TGG 0.331974 6_3:-4107215 None:intergenic
GCGGCTTGAATCATAATTCT+TGG 0.333912 6_3:-4106553 None:intergenic
ATCTTTGCCCTCTTCCCTCT+TGG 0.337977 6_3:-4113465 None:intergenic
CTTATTGAAGGACAACTAAT+AGG 0.339921 6_3:-4114634 None:intergenic
CGTGCAGGTGCATCTACTTA+TGG 0.346884 6_3:+4103931 Msa0934310:intron
ATAAATATAAGGATGGGATT+TGG 0.349610 6_3:+4107563 Msa0934310:CDS
CTGGCAAATTTGAAGTCAAC+AGG 0.364435 6_3:+4114535 Msa0934310:CDS
TTTAATGATTTGAAAGAAAT+CGG 0.368928 6_3:+4112845 Msa0934310:CDS
AGAATACATATGGGAACAAA+TGG 0.368945 6_3:+4107686 Msa0934310:CDS
ACGTATATCATTGCGGTAAC+GGG 0.373174 6_3:-4107523 None:intergenic
TTATATTTATAAAATTCTTT+GGG 0.376669 6_3:-4107550 None:intergenic
ACCGGATTTGCTCGGGTCTT+GGG 0.377683 6_3:+4106504 Msa0934310:CDS
TTAACGTCATCCATTAGTTT+GGG 0.380065 6_3:-4103751 None:intergenic
GATTAAACCAAATCGATGAT+TGG 0.384436 6_3:-4104015 None:intergenic
ACTGGTCATGTAAAAGTTCC+TGG 0.395404 6_3:+4107451 Msa0934310:CDS
TCTATGCAACGAATTTCAAA+TGG 0.400811 6_3:+4114790 Msa0934310:three_prime_UTR
TCAGTAGCAACTTCACCTTT+TGG 0.405393 6_3:-4113786 None:intergenic
ATTTCCAACATTATTCTTTG+TGG 0.405740 6_3:+4114718 Msa0934310:three_prime_UTR
TGGTGCCAGTCGACCTCGTC+TGG 0.407923 6_3:-4106654 None:intergenic
TGACGAGAGTCATTTGCTTC+GGG 0.417023 6_3:+4107486 Msa0934310:CDS
CAATTCTGTACCATCTCATC+TGG 0.420799 6_3:+4113514 Msa0934310:CDS
GACCGAGACATAATAGAAAC+AGG 0.423710 6_3:+4105837 Msa0934310:five_prime_UTR
GTGACGAGAGTCATTTGCTT+CGG 0.424226 6_3:+4107485 Msa0934310:CDS
GATTAATAACCGGATTTGCT+CGG 0.426263 6_3:+4106496 Msa0934310:CDS
CAATTGTCTGATGATGATAT+TGG 0.427395 6_3:+4113852 Msa0934310:CDS
TTGAATACATAAAGAGGAAC+GGG 0.427836 6_3:+4107347 Msa0934310:CDS
CTCCGGTCTTGATGTGGATA+AGG 0.429547 6_3:-4107234 None:intergenic
ACCCAAGACCCGAGCAAATC+CGG 0.430831 6_3:-4106505 None:intergenic
GCAGCTGATTTCGAGGTTTG+TGG 0.435111 6_3:+4108134 Msa0934310:intron
TTTCCAACATTATTCTTTGT+GGG 0.436183 6_3:+4114719 Msa0934310:three_prime_UTR
CTGAAATGTTGGCAAGAAAA+CGG 0.436250 6_3:+4103705 None:intergenic
ATTAAACCAAATCGATGATT+GGG 0.438106 6_3:-4104014 None:intergenic
CGAACTCGAACAATTGTTGA+TGG 0.444371 6_3:+4107598 Msa0934310:CDS
ATTAATAACCGGATTTGCTC+GGG 0.445363 6_3:+4106497 Msa0934310:CDS
AGTTCAGAAACGCTTATTGA+AGG 0.448338 6_3:-4114646 None:intergenic
GACGTTAACAAAGACAAAAC+TGG 0.452215 6_3:+4103766 Msa0934310:five_prime_UTR
TATCGTGGTCGCATTGTTCA+GGG 0.454378 6_3:+4106615 Msa0934310:CDS
TTACTCACCACATTCGCCTT+GGG 0.454880 6_3:-4106706 None:intergenic
GAAATGAATCGATTAATAAC+CGG 0.457995 6_3:+4106486 Msa0934310:intron
AATCAAATCGATAATTGGTT+GGG 0.459670 6_3:-4104870 None:intergenic
CAGATTGACAACCCCTCCTA+TGG 0.463837 6_3:-4103979 None:intergenic
TGAAATGTTGGCAAGAAAAC+GGG 0.464444 6_3:+4103706 None:intergenic
CATCTACTTATGGCTTATCA+TGG 0.464584 6_3:+4103941 Msa0934310:five_prime_UTR
GAATACATATGGGAACAAAT+GGG 0.467377 6_3:+4107687 Msa0934310:CDS
AGGATTTCGCAACGGCCATA+TGG 0.468478 6_3:-4107751 None:intergenic
AATAAAATAAATACCTGGGT+CGG 0.469818 6_3:-4104108 None:intergenic
AACGTATATCATTGCGGTAA+CGG 0.470232 6_3:-4107524 None:intergenic
CTGTGCCTATTTCCATAGGA+GGG 0.474234 6_3:+4103967 Msa0934310:five_prime_UTR
TATTTACAGGTGGGACCAAA+AGG 0.476441 6_3:+4113771 Msa0934310:intron
TAAGGATGGGATTTGGAGGA+AGG 0.477856 6_3:+4107570 Msa0934310:CDS
GATGCCATGGGACTCTTGCC+AGG 0.478933 6_3:-4113813 None:intergenic
AAATCAAATCGATAATTGGT+TGG 0.479330 6_3:-4104871 None:intergenic
AGACAACCTGGTAATAGTAT+TGG 0.480323 6_3:-4114683 None:intergenic
ATAGAGAATTGCATATTTCG+TGG 0.483028 6_3:-4114772 None:intergenic
TACCTGTTTCTATTATGTCT+CGG 0.484505 6_3:-4105839 None:intergenic
GTTACTCACCACATTCGCCT+TGG 0.487038 6_3:-4106707 None:intergenic
CCTATTCTCCAAGAGGGAAG+AGG 0.488545 6_3:+4113457 Msa0934310:CDS
CGACAGCATATATGGAAGCC+AGG 0.489445 6_3:-4107207 None:intergenic
ATAAAATAAATACCTGGGTC+GGG 0.491291 6_3:-4104107 None:intergenic
CTATGCAACGAATTTCAAAT+GGG 0.494425 6_3:+4114791 Msa0934310:three_prime_UTR
ACTTGCCAGACGAGGTCGAC+TGG 0.496853 6_3:+4106649 Msa0934310:CDS
AAAGTTCCTGGTCATGGAAA+CGG 0.503181 6_3:+4107463 Msa0934310:CDS
GGAAAATTAAGAATACATAT+GGG 0.503475 6_3:+4107677 Msa0934310:CDS
GAGGAAATTAACGAACTAGT+AGG 0.507037 6_3:+4107919 Msa0934310:CDS
CATGTAAAAGTTCCTGGTCA+TGG 0.508992 6_3:+4107457 Msa0934310:CDS
TCTTGAAGAATTAAGCGCTC+AGG 0.509616 6_3:+4107258 Msa0934310:CDS
AATCCCACAAAGAATAATGT+TGG 0.509955 6_3:-4114722 None:intergenic
CTAGTACTACATACCTGGGT+CGG 0.512737 6_3:-4104969 None:intergenic
CTCGCTCCGTTACATATCCT+AGG 0.513599 6_3:+4106679 Msa0934310:CDS
GTGAATAAAATCAATTTCAC+AGG 0.514000 6_3:-4114829 None:intergenic
ACTGTGCCTATTTCCATAGG+AGG 0.515188 6_3:+4103966 Msa0934310:five_prime_UTR
AATATAAGGATGGGATTTGG+AGG 0.521520 6_3:+4107566 Msa0934310:CDS
GGGAAGAGAGTTAAAATCAC+TGG 0.524252 6_3:+4107433 Msa0934310:CDS
TGTGCCTATTTCCATAGGAG+GGG 0.527905 6_3:+4103968 Msa0934310:five_prime_UTR
CAAAGGATGTTGCTATGCCC+TGG 0.527946 6_3:+4107189 Msa0934310:intron
AAGAAAGCTACCTCTAGCAC+AGG 0.528209 6_3:-4107790 None:intergenic
ATGTGGATTGAAAGAGATTG+CGG 0.533688 6_3:+4107724 Msa0934310:CDS
CGCTTTCCTATTCTCCAAGA+GGG 0.533886 6_3:+4113451 Msa0934310:CDS
CTATTCTCCAAGAGGGAAGA+GGG 0.534610 6_3:+4113458 Msa0934310:CDS
GGATTTGCTCGGGTCTTGGG+TGG 0.537985 6_3:+4106507 Msa0934310:CDS
TGAGATGGTACAGAATTGAT+TGG 0.538514 6_3:-4113509 None:intergenic
AGAGATTGCGGATTACCATA+TGG 0.538911 6_3:+4107736 Msa0934310:CDS
TAGTACTACATACCTGGGTC+GGG 0.539168 6_3:-4104968 None:intergenic
AGCCTTATCCACATCAAGAC+CGG 0.539452 6_3:+4107232 Msa0934310:CDS
AATCAATAAGAATAGAAAGA+TGG 0.540357 6_3:+4113902 Msa0934310:CDS
TTGTCTCTTTACCCTTGTAA+GGG 0.542447 6_3:-4107390 None:intergenic
GTTACTGTGCCTATTTCCAT+AGG 0.543664 6_3:+4103963 Msa0934310:five_prime_UTR
AGATGTCGTCTCTCTAAAAG+AGG 0.544043 6_3:+4107412 Msa0934310:CDS
AGGTATTTGAATACATAAAG+AGG 0.546368 6_3:+4107341 Msa0934310:CDS
TAATTTCCAATACTATTACC+AGG 0.547032 6_3:+4114677 Msa0934310:three_prime_UTR
AAACCAAATCGATGATTGGG+TGG 0.560538 6_3:-4104011 None:intergenic
ATTGCTGTCTCTGCATATGA+TGG 0.561926 6_3:-4113882 None:intergenic
GATGCATCCTGACCACCTCC+AGG 0.562423 6_3:-4114489 None:intergenic
CATTCGCCTTGGGCAACCCT+AGG 0.563425 6_3:-4106696 None:intergenic
CTGTACCTAAAAGTCATAGC+AGG 0.566003 6_3:+4103794 Msa0934310:five_prime_UTR
ACAATTACTGATCATCGTGC+TGG 0.570198 6_3:+4114516 Msa0934310:CDS
TGACAGAGGTAACGGTAACA+AGG 0.570296 6_3:+4107294 Msa0934310:CDS
CTAAACAATACCAGATGAGA+TGG 0.572125 6_3:-4113524 None:intergenic
AGTGGCAACAGCAGATGCCA+TGG 0.575266 6_3:-4113826 None:intergenic
GATATGTAACGGAGCGAGCA+TGG 0.575738 6_3:-4106674 None:intergenic
GTGGCAACAGCAGATGCCAT+GGG 0.576151 6_3:-4113825 None:intergenic
TCGTGGTCGCATTGTTCAGG+GGG 0.582354 6_3:+4106617 Msa0934310:CDS
GCTTAATTCTTCAAGAACTC+CGG 0.584191 6_3:-4107251 None:intergenic
TTTGAATACATAAAGAGGAA+CGG 0.584506 6_3:+4107346 Msa0934310:CDS
TCGTCACCGTTTCCATGACC+AGG 0.586625 6_3:-4107469 None:intergenic
TCATTTGCAGGGCACTGAAG+AGG 0.587334 6_3:+4107900 Msa0934310:intron
ATCGTGGTCGCATTGTTCAG+GGG 0.591913 6_3:+4106616 Msa0934310:CDS
CAAGAACTCCGGTCTTGATG+TGG 0.594900 6_3:-4107240 None:intergenic
AGGGTTGCCCAAGGCGAATG+TGG 0.595130 6_3:+4106699 Msa0934310:CDS
AATACATATGGGAACAAATG+GGG 0.598223 6_3:+4107688 Msa0934310:CDS
AACGGTAACAAGGGATGTAA+CGG 0.598475 6_3:+4107304 Msa0934310:CDS
TCGCTCCGTTACATATCCTA+GGG 0.601139 6_3:+4106680 Msa0934310:CDS
GTGTCTTGTGACAGAGGTAA+CGG 0.607196 6_3:+4107286 Msa0934310:CDS
TGGACACTGAACAGTTTCAG+TGG 0.608580 6_3:+4108154 Msa0934310:CDS
CAGGATAATGAGCATCGAGA+AGG 0.609449 6_3:-4107771 None:intergenic
ATACATATGGGAACAAATGG+GGG 0.611571 6_3:+4107689 Msa0934310:CDS
GACAGCATATATGGAAGCCA+GGG 0.611978 6_3:-4107206 None:intergenic
ATATCATCATCAGACAATTG+TGG 0.612089 6_3:-4113849 None:intergenic
TGCTCATTATCCTGTGCTAG+AGG 0.625163 6_3:+4107780 Msa0934310:CDS
TACTACATACCTGGGTCGGG+TGG 0.626200 6_3:-4104965 None:intergenic
AAATAAATACCTGGGTCGGG+TGG 0.626403 6_3:-4104104 None:intergenic
AACCAAATCGATGATTGGGT+GGG 0.626947 6_3:-4104010 None:intergenic
GCAACCTGGCAAGAGTCCCA+TGG 0.627514 6_3:+4113809 Msa0934310:CDS
GACAACTAATAGGCTCAACT+AGG 0.630668 6_3:-4114624 None:intergenic
GATGTCGTCTCTCTAAAAGA+GGG 0.630983 6_3:+4107413 Msa0934310:CDS
TATAGAAAATAAAGACAACC+TGG 0.632473 6_3:-4114695 None:intergenic
GAAATCGTGTCTTGTGACAG+AGG 0.634008 6_3:+4107280 Msa0934310:CDS
GGGATTAACGTATATCATTG+CGG 0.637029 6_3:-4107530 None:intergenic
ATCATCAGACAATTGTGGAG+TGG 0.637497 6_3:-4113844 None:intergenic
GGCAACCCTAGGATATGTAA+CGG 0.640932 6_3:-4106685 None:intergenic
CGTCTCTGACTTGCCAGACG+AGG 0.642134 6_3:+4106641 Msa0934310:CDS
TACTTACTCAGATCTAAGAG+AGG 0.648220 6_3:-4103843 None:intergenic
GAAGTTGCTACTGAGCAACC+TGG 0.650794 6_3:+4113795 Msa0934310:CDS
GCGCTTTCCTATTCTCCAAG+AGG 0.651050 6_3:+4113450 Msa0934310:CDS
ACATATCCTAGGGTTGCCCA+AGG 0.661221 6_3:+4106690 Msa0934310:CDS
ACTCAGATCTAAGAGAGGAG+CGG 0.677993 6_3:-4103838 None:intergenic
GACAGAGGTAACGGTAACAA+GGG 0.680528 6_3:+4107295 Msa0934310:CDS
TGGCAAATTTGAAGTCAACA+GGG 0.696531 6_3:+4114536 Msa0934310:CDS
CATCGAGAAGGATTTCGCAA+CGG 0.698659 6_3:-4107759 None:intergenic
GGTAACAAGGGATGTAACGG+AGG 0.721444 6_3:+4107307 Msa0934310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAAAATAAATACCT+GGG - chr6_3:4104115-4104134 None:intergenic 10.0%
!! AATATAATAAAATAAATACC+TGG - chr6_3:4104116-4104135 None:intergenic 10.0%
!! ATAAATCTAATTATTACTAT+TGG + chr6_3:4104143-4104162 Msa0934310:intron 10.0%
!! TAAATCTAATTATTACTATT+GGG + chr6_3:4104144-4104163 Msa0934310:intron 10.0%
!! ATTGAAACAAAAAAAAATAA+AGG + chr6_3:4104552-4104571 Msa0934310:intron 10.0%
!! TGTTACATAAAATTAAATTA+AGG + chr6_3:4104582-4104601 Msa0934310:intron 10.0%
!! GTTACATAAAATTAAATTAA+GGG + chr6_3:4104583-4104602 Msa0934310:intron 10.0%
!! TTTAAACATATAAATAGAAA+AGG - chr6_3:4104733-4104752 None:intergenic 10.0%
!! CATTAAATAATTTATGTATT+TGG - chr6_3:4105126-4105145 None:intergenic 10.0%
!! TTGAAAATCAATAATATTAT+GGG - chr6_3:4105335-4105354 None:intergenic 10.0%
!! TTTGAAAATCAATAATATTA+TGG - chr6_3:4105336-4105355 None:intergenic 10.0%
!!! AAGTATTGTATTATAAAAAA+GGG - chr6_3:4105700-4105719 None:intergenic 10.0%
!!! ATTTATTTTGACAAATAAAA+AGG + chr6_3:4106268-4106287 Msa0934310:intron 10.0%
!! CTTATATTTATAAAATTCTT+TGG - chr6_3:4107554-4107573 None:intergenic 10.0%
!!! CAAAGAATTTTATAAATATA+AGG + chr6_3:4107552-4107571 Msa0934310:CDS 10.0%
!!! AATTTTATAAATATAAGGAT+GGG + chr6_3:4107557-4107576 Msa0934310:CDS 10.0%
!!! ATTATTTAAGTTTATATAAG+TGG + chr6_3:4109222-4109241 Msa0934310:intron 10.0%
!! TATATTTATTAATTCATATG+TGG - chr6_3:4110636-4110655 Msa0934320:intron 10.0%
!! TTTGCATTTAAAAATAAATA+TGG + chr6_3:4111408-4111427 Msa0934310:intron 10.0%
!! TTGCATTTAAAAATAAATAT+GGG + chr6_3:4111409-4111428 Msa0934310:intron 10.0%
!! TAGATATATTAATGATATAT+TGG + chr6_3:4113544-4113563 Msa0934310:intron 10.0%
!!! TTTTTTTTTTTTTTTTGTAG+GGG + chr6_3:4114463-4114482 Msa0934310:intron 10.0%
!! ATATAATTAAACACGTAAAT+AGG - chr6_3:4103885-4103904 None:intergenic 15.0%
!!! ATAATAATTATGTCTTCTTT+TGG + chr6_3:4104928-4104947 Msa0934310:five_prime_UTR 15.0%
!!! TAATAATTATGTCTTCTTTT+GGG + chr6_3:4104929-4104948 Msa0934310:five_prime_UTR 15.0%
!!! ATTAATTGTCTTTTGTAAAT+AGG + chr6_3:4105156-4105175 Msa0934310:intron 15.0%
!!! TAACTTTCATGATTTTTTAT+AGG + chr6_3:4105479-4105498 Msa0934310:intron 15.0%
!!! AACTTTCATGATTTTTTATA+GGG + chr6_3:4105480-4105499 Msa0934310:intron 15.0%
!!! CAAGTATTGTATTATAAAAA+AGG - chr6_3:4105701-4105720 None:intergenic 15.0%
!!! AATTTTACAAAATCAATTCA+TGG - chr6_3:4106016-4106035 None:intergenic 15.0%
!! CAAAATATATATAATCACTA+AGG - chr6_3:4106221-4106240 None:intergenic 15.0%
!! TACATCATTGAAATAAAAAA+GGG - chr6_3:4106799-4106818 None:intergenic 15.0%
!! ATACATCATTGAAATAAAAA+AGG - chr6_3:4106800-4106819 None:intergenic 15.0%
!!! ATTTGTTGTTATATATGTTT+GGG + chr6_3:4107161-4107180 Msa0934310:intron 15.0%
!!! GAATTTTATAAATATAAGGA+TGG + chr6_3:4107556-4107575 Msa0934310:CDS 15.0%
!! AATAAATGATAAATAGTTGT+GGG - chr6_3:4107845-4107864 None:intergenic 15.0%
!! AAATAAATGATAAATAGTTG+TGG - chr6_3:4107846-4107865 None:intergenic 15.0%
!!! ATAGTAAAGGTTTAATTTTA+TGG - chr6_3:4108499-4108518 Msa0934320:three_prime_UTR 15.0%
!! ATTACATTAAATTAAACCAT+GGG + chr6_3:4108543-4108562 Msa0934310:intron 15.0%
!!! ATAAATAATGTTGATTTCTT+GGG - chr6_3:4108776-4108795 Msa0934320:intron 15.0%
!!! TTTTATTTTTCATGACTTTT+TGG - chr6_3:4109071-4109090 Msa0934320:intron 15.0%
!! TTTCAACAATAAAAAATAGA+AGG + chr6_3:4109756-4109775 Msa0934310:intron 15.0%
!! ATGAATAAAAAAATACCAAA+AGG + chr6_3:4110205-4110224 Msa0934310:intron 15.0%
!!! CATGGTTTAATAAATTTTTT+TGG - chr6_3:4110345-4110364 Msa0934320:intron 15.0%
!!! TTTCTTCAAATTTGATAATT+TGG - chr6_3:4110375-4110394 Msa0934320:intron 15.0%
!!! GTAGTTTAATCAAAATTTTA+AGG + chr6_3:4110538-4110557 Msa0934310:intron 15.0%
!!! TAATTATCACAATTTTTCTA+TGG + chr6_3:4110654-4110673 Msa0934310:intron 15.0%
!! AAGTTTGTATTCTAATTATT+TGG - chr6_3:4111148-4111167 Msa0934320:intron 15.0%
!!! TTTCAATTTATTTTTCTCTT+TGG - chr6_3:4111386-4111405 Msa0934320:intron 15.0%
!!! GATTTTATAATAAGTAAGAT+GGG + chr6_3:4112742-4112761 Msa0934310:intron 15.0%
!! TTTAATGATTTGAAAGAAAT+CGG + chr6_3:4112845-4112864 Msa0934310:CDS 15.0%
!!! AAAAAAACATTTGATTTCAA+CGG - chr6_3:4112887-4112906 None:intergenic 15.0%
!!! TTTCTTTTTTAATCTTATGT+GGG + chr6_3:4112973-4112992 Msa0934310:intron 15.0%
!!! TTTTTAATTTAGTTATGTAG+AGG - chr6_3:4113654-4113673 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTGTAGG+GGG + chr6_3:4114464-4114483 Msa0934310:intron 15.0%
!!! TTTTTTAAAACCCAAACTAA+TGG + chr6_3:4103741-4103760 Msa0934310:five_prime_UTR 20.0%
!!! ATAATAATAATGCCTTCTTT+TGG + chr6_3:4104061-4104080 Msa0934310:five_prime_UTR 20.0%
!! ATTAAAAACAATCCAAAAGA+AGG - chr6_3:4104076-4104095 None:intergenic 20.0%
!!! TTTTATTGCAAATAAAGTCT+TGG + chr6_3:4104392-4104411 Msa0934310:intron 20.0%
!!! CAATGTAAAACTACTATTTT+TGG - chr6_3:4105251-4105270 None:intergenic 20.0%
!!! CAAAAATAGTAGTTTTACAT+TGG + chr6_3:4105249-4105268 Msa0934310:intron 20.0%
!!! TAGTTTTAAGATCATTTGAT+TGG - chr6_3:4105810-4105829 None:intergenic 20.0%
!! GACTCTAATTAAAAAAACAT+TGG + chr6_3:4106144-4106163 Msa0934310:intron 20.0%
!! ATATATAATCACTAAGGTTA+TGG - chr6_3:4106215-4106234 None:intergenic 20.0%
!!! GTAAATTTTTAACTAAAGTG+AGG - chr6_3:4106300-4106319 None:intergenic 20.0%
!! CTGATTTAAACAAAAATTTG+CGG - chr6_3:4106575-4106594 None:intergenic 20.0%
!! TTTCATAAGCTATAATAAGT+TGG + chr6_3:4107058-4107077 Msa0934310:intron 20.0%
!!! CATTTGTTGTTATATATGTT+TGG + chr6_3:4107160-4107179 Msa0934310:intron 20.0%
!! TGGAAAATTAAGAATACATA+TGG + chr6_3:4107676-4107695 Msa0934310:CDS 20.0%
!! GGAAAATTAAGAATACATAT+GGG + chr6_3:4107677-4107696 Msa0934310:CDS 20.0%
!!! CTTTTTGAATAGATTTATAC+CGG + chr6_3:4107969-4107988 Msa0934310:CDS 20.0%
!! CTGATAGAAACTTTAATTAA+AGG + chr6_3:4108471-4108490 Msa0934310:intron 20.0%
!! ATTAAACCTTTACTATTACA+TGG + chr6_3:4108503-4108522 Msa0934310:intron 20.0%
!! TTAAACCTTTACTATTACAT+GGG + chr6_3:4108504-4108523 Msa0934310:intron 20.0%
!!! CATGGTTTAATTTAATGTAA+TGG - chr6_3:4108544-4108563 Msa0934320:three_prime_UTR 20.0%
!! CATTACATTAAATTAAACCA+TGG + chr6_3:4108542-4108561 Msa0934310:intron 20.0%
!!! GATAAATAATGTTGATTTCT+TGG - chr6_3:4108777-4108796 Msa0934320:intron 20.0%
!!! TTATTTTAATCCAATGCTAT+TGG - chr6_3:4108898-4108917 Msa0934320:intron 20.0%
!! TTGGTTATATTTAATCATGT+TGG - chr6_3:4109101-4109120 Msa0934320:intron 20.0%
!!! AATTTTTTCATTCTAATGTG+TGG - chr6_3:4109459-4109478 Msa0934320:intron 20.0%
!!! GGAATTTTGCTAATTAAAAT+GGG - chr6_3:4109682-4109701 Msa0934320:intron 20.0%
!!! AGGAATTTTGCTAATTAAAA+TGG - chr6_3:4109683-4109702 Msa0934320:intron 20.0%
!!! TTCTATTTTTCTTAAGAGTT+TGG - chr6_3:4109943-4109962 Msa0934320:intron 20.0%
!! ACTCTTAAGAAAAATAGAAA+AGG + chr6_3:4109944-4109963 Msa0934310:intron 20.0%
!!! TAAAATATTTGTTACCACAT+AGG + chr6_3:4110027-4110046 Msa0934310:intron 20.0%
!!! TAAAATATTTGTTACCACAT+AGG + chr6_3:4110027-4110046 Msa0934310:intron 20.0%
!! TCAGTAATTAATTAATGAGA+AGG - chr6_3:4110709-4110728 Msa0934320:intron 20.0%
!! ATTAATTAATTACTGACAGT+TGG + chr6_3:4110713-4110732 Msa0934310:intron 20.0%
!! TTAATTAATTACTGACAGTT+GGG + chr6_3:4110714-4110733 Msa0934310:intron 20.0%
!! TATTATATTGGATAGGATAT+CGG - chr6_3:4110853-4110872 Msa0934320:intron 20.0%
!!! TTTTTATTTCCAATGATAGT+GGG - chr6_3:4110878-4110897 Msa0934320:intron 20.0%
!!! TTTTTTATTTCCAATGATAG+TGG - chr6_3:4110879-4110898 Msa0934320:intron 20.0%
!! CAATATAATAAAGAAAGTGA+TGG + chr6_3:4110908-4110927 Msa0934310:intron 20.0%
!!! TTGGATACGTTTTTTATTTT+GGG + chr6_3:4111961-4111980 Msa0934310:intron 20.0%
!! GATATTGTTTGATTAAACAA+AGG + chr6_3:4112522-4112541 Msa0934310:intron 20.0%
!! CTTACTTATTATAAAATCCA+AGG - chr6_3:4112740-4112759 None:intergenic 20.0%
!!! GGATTTTATAATAAGTAAGA+TGG + chr6_3:4112741-4112760 Msa0934310:intron 20.0%
!!! ATTTTGTTCTGTTTCTTTAT+TGG + chr6_3:4112779-4112798 Msa0934310:intron 20.0%
!!! CTTTCTTTTTTAATCTTATG+TGG + chr6_3:4112972-4112991 Msa0934310:intron 20.0%
!!! CAGAAAACAAATTGATTTAT+TGG - chr6_3:4113393-4113412 None:intergenic 20.0%
!! TGTAAACTCTAATTATTTAC+AGG + chr6_3:4113758-4113777 Msa0934310:intron 20.0%
!! AATCAATAAGAATAGAAAGA+TGG + chr6_3:4113902-4113921 Msa0934310:CDS 20.0%
!! TAAAATGCATGTCTATATAT+TGG + chr6_3:4114091-4114110 Msa0934310:intron 20.0%
!!! ATGGGTTTTTTTTTATTGAA+AGG + chr6_3:4114246-4114265 Msa0934310:intron 20.0%
!!! TATCATTTTCTTGTTTTAAC+CGG - chr6_3:4114290-4114309 None:intergenic 20.0%
!! GAAGCAAATAAAAAATAAAC+TGG - chr6_3:4114412-4114431 None:intergenic 20.0%
!! AAAAAAAAAAAAACAGGGTA+AGG - chr6_3:4114447-4114466 None:intergenic 20.0%
!!! CTACTTCATGAATTTAATTT+GGG + chr6_3:4114570-4114589 Msa0934310:three_prime_UTR 20.0%
!!! TAGTTTGGGTTTTAAAAAAC+TGG - chr6_3:4103740-4103759 None:intergenic 25.0%
! ATTAAACCAAATCGATGATT+GGG - chr6_3:4104017-4104036 None:intergenic 25.0%
! AATAAAATAAATACCTGGGT+CGG - chr6_3:4104111-4104130 None:intergenic 25.0%
! TCTAATTATTACTATTGGGA+TGG + chr6_3:4104148-4104167 Msa0934310:intron 25.0%
! AAGAATTGAAACCAAATTCA+AGG + chr6_3:4104436-4104455 Msa0934310:intron 25.0%
! ATTGACATGACAAATTTACA+AGG - chr6_3:4104627-4104646 None:intergenic 25.0%
! TATCTACTTATGGCTTATAA+TGG + chr6_3:4104799-4104818 Msa0934310:intron 25.0%
!!! TTACTGTGCTTATTTTTCAT+AGG + chr6_3:4104822-4104841 Msa0934310:intron 25.0%
! AATCAAATCGATAATTGGTT+GGG - chr6_3:4104873-4104892 None:intergenic 25.0%
! AAATCAAATCGATAATTGGT+TGG - chr6_3:4104874-4104893 None:intergenic 25.0%
!!! ACCAATTATCGATTTGATTT+TGG + chr6_3:4104874-4104893 Msa0934310:five_prime_UTR 25.0%
! ACCAAAATCAAATCGATAAT+TGG - chr6_3:4104878-4104897 None:intergenic 25.0%
! GTCAACTTTCTCTTATAAAT+AGG - chr6_3:4105057-4105076 None:intergenic 25.0%
!!! TACTATTTTTGGTTTCCTTA+GGG - chr6_3:4105240-4105259 None:intergenic 25.0%
! CTAAACTTTGAATCAAACAT+AGG - chr6_3:4105368-4105387 None:intergenic 25.0%
! AAACACATAATGAAATCTAG+AGG - chr6_3:4105393-4105412 None:intergenic 25.0%
! TCTAGATTTCATTATGTGTT+TGG + chr6_3:4105392-4105411 Msa0934310:intron 25.0%
! ATAATAGAAACAGGTAACAA+TGG + chr6_3:4105846-4105865 Msa0934310:intron 25.0%
!! TTTAATTAGAGTCGTGATTT+TGG - chr6_3:4106137-4106156 None:intergenic 25.0%
! ACAAAAAGCTAACATAACAT+TGG + chr6_3:4106326-4106345 Msa0934310:intron 25.0%
! CAAAAAGCTAACATAACATT+GGG + chr6_3:4106327-4106346 Msa0934310:intron 25.0%
! GAAAATGTAATGAATGAATG+AGG - chr6_3:4106410-4106429 None:intergenic 25.0%
! GATTCATTTCTGTGAAAATT+GGG - chr6_3:4106476-4106495 None:intergenic 25.0%
! GAAATGAATCGATTAATAAC+CGG + chr6_3:4106486-4106505 Msa0934310:intron 25.0%
! CAATTATTAGCTACTTATTG+TGG - chr6_3:4106884-4106903 None:intergenic 25.0%
! CTTATCATGATAAGTGATTA+TGG + chr6_3:4106994-4107013 Msa0934310:intron 25.0%
! AGGAAAGCTTAATGAAATAA+GGG - chr6_3:4107104-4107123 None:intergenic 25.0%
! AAGGAAAGCTTAATGAAATA+AGG - chr6_3:4107105-4107124 None:intergenic 25.0%
!! ATGTATTCAAATACCTTTTG+AGG - chr6_3:4107337-4107356 None:intergenic 25.0%
! AGGTATTTGAATACATAAAG+AGG + chr6_3:4107341-4107360 Msa0934310:CDS 25.0%
! TTTGAATACATAAAGAGGAA+CGG + chr6_3:4107346-4107365 Msa0934310:CDS 25.0%
! ATAAATATAAGGATGGGATT+TGG + chr6_3:4107563-4107582 Msa0934310:CDS 25.0%
! ACTTAATTGTGTCAATAGTA+TGG - chr6_3:4107654-4107673 None:intergenic 25.0%
!! CTATTGACACAATTAAGTTT+TGG + chr6_3:4107656-4107675 Msa0934310:CDS 25.0%
! TCTTAAAAAACTCATTTGCA+GGG + chr6_3:4107889-4107908 Msa0934310:intron 25.0%
! AATCTATTCAAAAAGCTCTT+AGG - chr6_3:4107964-4107983 None:intergenic 25.0%
! TATCATTATTGCATACTCAA+TGG - chr6_3:4108242-4108261 None:intergenic 25.0%
! TACTCTTTGTCTTGAAAAAA+TGG - chr6_3:4108376-4108395 Msa0934320:three_prime_UTR 25.0%
!!! ATTTTTTCAAGACAAAGAGT+AGG + chr6_3:4108375-4108394 Msa0934310:intron 25.0%
! ATTTATATATCGCTGATGAT+AGG + chr6_3:4108415-4108434 Msa0934310:intron 25.0%
!! TGGAAATGTCTGTTAAATTT+TGG - chr6_3:4108746-4108765 Msa0934320:intron 25.0%
! AAGTCTGTATCTAATGAATT+AGG - chr6_3:4108866-4108885 Msa0934320:intron 25.0%
!!! TTTTTTCTTTCCAATAGCAT+TGG + chr6_3:4108885-4108904 Msa0934310:intron 25.0%
! GAAACAAAGAGTAAATAACA+TGG + chr6_3:4108930-4108949 Msa0934310:intron 25.0%
! ACGTGAATTTAAAGAAATGA+AGG + chr6_3:4109009-4109028 Msa0934310:intron 25.0%
! TTTAAAGAAATGAAGGAGTA+AGG + chr6_3:4109016-4109035 Msa0934310:intron 25.0%
! TGTAGCATTAATCATATCAT+AGG + chr6_3:4109153-4109172 Msa0934310:intron 25.0%
! GTAGCATTAATCATATCATA+GGG + chr6_3:4109154-4109173 Msa0934310:intron 25.0%
! TAGCATTAATCATATCATAG+GGG + chr6_3:4109155-4109174 Msa0934310:intron 25.0%
! TAAATAATGACACATGATCT+TGG - chr6_3:4109210-4109229 Msa0934320:intron 25.0%
! TAGAATGAAAAAATTCTACC+TGG + chr6_3:4109464-4109483 Msa0934310:intron 25.0%
! AACTAACTCATGTAGAATTT+AGG - chr6_3:4109563-4109582 Msa0934320:intron 25.0%
! TTTGCTAATTAAAATGGGAA+GGG - chr6_3:4109677-4109696 Msa0934320:intron 25.0%
!! TTTTGCTAATTAAAATGGGA+AGG - chr6_3:4109678-4109697 Msa0934320:intron 25.0%
! TAAAATAACAAAAAACGCAG+TGG + chr6_3:4109812-4109831 Msa0934310:intron 25.0%
!! TTTTTATTCATCATGTGCAT+AGG - chr6_3:4110196-4110215 Msa0934320:intron 25.0%
!!! AACTTTAGAATGATACCTTT+TGG - chr6_3:4110223-4110242 Msa0934320:intron 25.0%
!! AGTTATGTTGACTGAAATTT+AGG - chr6_3:4110263-4110282 Msa0934320:intron 25.0%
! TAAATTTCAGTCAACATAAC+TGG + chr6_3:4110262-4110281 Msa0934310:intron 25.0%
! TGATAATTTGGTCATTTACA+TGG - chr6_3:4110363-4110382 Msa0934320:intron 25.0%
! AAAACTAACACAACATACAA+AGG + chr6_3:4110516-4110535 Msa0934310:intron 25.0%
!!! TAATTAATGAGAAGGTGTTA+GGG - chr6_3:4110701-4110720 Msa0934320:intron 25.0%
!!! TTAATTAATGAGAAGGTGTT+AGG - chr6_3:4110702-4110721 Msa0934320:intron 25.0%
!!! TGATAGTGGGTTTATTATAT+TGG - chr6_3:4110865-4110884 Msa0934320:intron 25.0%
! TATAATAAACCCACTATCAT+TGG + chr6_3:4110866-4110885 Msa0934310:intron 25.0%
! TTCTTCAAATTATTGCTCAT+TGG - chr6_3:4111093-4111112 Msa0934320:intron 25.0%
! GCAATAATTTGAAGAATCAT+TGG + chr6_3:4111097-4111116 Msa0934310:intron 25.0%
! TCAATAACAATCTCAACTAA+AGG + chr6_3:4111199-4111218 Msa0934310:intron 25.0%
! CTTTGAGTAAAATAAACTCT+CGG + chr6_3:4111249-4111268 Msa0934310:intron 25.0%
! ATTCAAAAACTTAGCTACAA+TGG + chr6_3:4111485-4111504 Msa0934310:intron 25.0%
!!! TTTTGGAAAAAGTTCTTGAT+GGG - chr6_3:4111617-4111636 Msa0934320:intron 25.0%
!!! AACTTTTTCCAAAACTTTGA+AGG + chr6_3:4111623-4111642 Msa0934310:intron 25.0%
!!! ACATTTTGATACAGAAACAA+AGG + chr6_3:4111713-4111732 Msa0934310:intron 25.0%
!!! CTTGGATACGTTTTTTATTT+TGG + chr6_3:4111960-4111979 Msa0934310:intron 25.0%
!!! ACGTTTTTTATTTTGGGAAA+AGG + chr6_3:4111967-4111986 Msa0934310:intron 25.0%
! AAAAATTGAAACCCTAAAAC+TGG + chr6_3:4112165-4112184 Msa0934310:intron 25.0%
! TTATGACAAATTGAAATCCA+AGG + chr6_3:4112280-4112299 Msa0934310:intron 25.0%
!!! TGTTGTTATTTTTTCTTCCT+TGG - chr6_3:4112300-4112319 Msa0934320:five_prime_UTR 25.0%
! GAAAAAGATGAAAGAAATTG+TGG + chr6_3:4112382-4112401 Msa0934310:intron 25.0%
!!! GCAATATTTTTTTTCCAACA+TGG + chr6_3:4112547-4112566 Msa0934310:intron 25.0%
!! ATTTGATAACAAAACCATGT+TGG - chr6_3:4112564-4112583 None:intergenic 25.0%
!!! GTTTTGTTATCAAATCCTAT+TGG + chr6_3:4112569-4112588 Msa0934310:intron 25.0%
!!! TCAGTGTAATTTTGTCATTT+TGG + chr6_3:4112648-4112667 Msa0934310:intron 25.0%
!!! CAGTGTAATTTTGTCATTTT+GGG + chr6_3:4112649-4112668 Msa0934310:intron 25.0%
! AAGAAACAGAACAAAATTGT+GGG - chr6_3:4112776-4112795 None:intergenic 25.0%
! AAAGAAACAGAACAAAATTG+TGG - chr6_3:4112777-4112796 None:intergenic 25.0%
!!! TGTGTTTTTTTCTTGTTTTG+TGG + chr6_3:4112809-4112828 Msa0934310:intron 25.0%
!!! ATTTTGATACACTTTTATGC+AGG + chr6_3:4112932-4112951 Msa0934310:intron 25.0%
! TTAATCTTATGTGGGAAATT+AGG + chr6_3:4112981-4113000 Msa0934310:intron 25.0%
! TATTAAGAAACACATACACA+AGG - chr6_3:4113048-4113067 None:intergenic 25.0%
! TATTAAGAAACACATACACA+AGG - chr6_3:4113048-4113067 None:intergenic 25.0%
!!! TGAAGTGTATAGTTTTAACT+TGG - chr6_3:4113175-4113194 None:intergenic 25.0%
!!! TCAATTTGTTTTCTGTTTTC+TGG + chr6_3:4113398-4113417 Msa0934310:intron 25.0%
! TTAGTTATGTAGAGGATAAA+TGG - chr6_3:4113646-4113665 None:intergenic 25.0%
! AAACTCTAATTATTTACAGG+TGG + chr6_3:4113761-4113780 Msa0934310:intron 25.0%
! AACTCTAATTATTTACAGGT+GGG + chr6_3:4113762-4113781 Msa0934310:intron 25.0%
!! AAATTTTTGAATTGTGTGAC+TGG + chr6_3:4114124-4114143 Msa0934310:intron 25.0%
!!! TGCAACAAATGTCTATTTTT+AGG + chr6_3:4114179-4114198 Msa0934310:intron 25.0%
! TGTATAAAACTTACAAGTGT+AGG + chr6_3:4114204-4114223 Msa0934310:intron 25.0%
! TACAAAGAAAGAAGAAACAA+TGG + chr6_3:4114227-4114246 Msa0934310:intron 25.0%
! ACAAAGAAAGAAGAAACAAT+GGG + chr6_3:4114228-4114247 Msa0934310:intron 25.0%
! GGTTAAAACAAGAAAATGAT+AGG + chr6_3:4114289-4114308 Msa0934310:intron 25.0%
! CAGATAAATAAACAATCCAA+GGG - chr6_3:4114319-4114338 None:intergenic 25.0%
! TGTTTATATGTTCTTAAACG+AGG - chr6_3:4114343-4114362 None:intergenic 25.0%
! AATAAAAAATAAACTGGTGG+TGG - chr6_3:4114406-4114425 None:intergenic 25.0%
! GCAAATAAAAAATAAACTGG+TGG - chr6_3:4114409-4114428 None:intergenic 25.0%
! GCTACTTCATGAATTTAATT+TGG + chr6_3:4114569-4114588 Msa0934310:exon 25.0%
! TAATTTCCAATACTATTACC+AGG + chr6_3:4114677-4114696 Msa0934310:three_prime_UTR 25.0%
! TATAGAAAATAAAGACAACC+TGG - chr6_3:4114698-4114717 None:intergenic 25.0%
! ATTTCCAACATTATTCTTTG+TGG + chr6_3:4114718-4114737 Msa0934310:three_prime_UTR 25.0%
! TTTCCAACATTATTCTTTGT+GGG + chr6_3:4114719-4114738 Msa0934310:three_prime_UTR 25.0%
! GTGAATAAAATCAATTTCAC+AGG - chr6_3:4114832-4114851 None:intergenic 25.0%
!!! TTGGGTTTTAAAAAACTGGT+TGG - chr6_3:4103736-4103755 None:intergenic 30.0%
! TTAACGTCATCCATTAGTTT+GGG - chr6_3:4103754-4103773 None:intergenic 30.0%
GATTAAACCAAATCGATGAT+TGG - chr6_3:4104018-4104037 None:intergenic 30.0%
ATAAAATAAATACCTGGGTC+GGG - chr6_3:4104110-4104129 None:intergenic 30.0%
!! TGTGCTTATTTTTCATAGGA+GGG + chr6_3:4104826-4104845 Msa0934310:intron 30.0%
AATACTAGTACTACATACCT+GGG - chr6_3:4104976-4104995 None:intergenic 30.0%
AAATACTAGTACTACATACC+TGG - chr6_3:4104977-4104996 None:intergenic 30.0%
CTTTCTCTTATAAATAGGAC+CGG - chr6_3:4105052-4105071 None:intergenic 30.0%
! TTGTCTTTTGTAAATAGGAC+CGG + chr6_3:4105161-4105180 Msa0934310:intron 30.0%
! TGGTTTGGACGAATAATATT+AGG + chr6_3:4105198-4105217 Msa0934310:intron 30.0%
GGTTTGGACGAATAATATTA+GGG + chr6_3:4105199-4105218 Msa0934310:intron 30.0%
!!! CTACTATTTTTGGTTTCCTT+AGG - chr6_3:4105241-4105260 None:intergenic 30.0%
AATGCTAAATATTGCCCTTA+GGG - chr6_3:4105311-4105330 None:intergenic 30.0%
AAATGCTAAATATTGCCCTT+AGG - chr6_3:4105312-4105331 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG - chr6_3:4105521-4105540 None:intergenic 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + chr6_3:4105570-4105589 Msa0934310:intron 30.0%
ACACCTTCATAAAAAGTAGT+TGG - chr6_3:4105576-4105595 None:intergenic 30.0%
!! TTAGATTTTTGAGCGAGTTT+TGG + chr6_3:4105778-4105797 Msa0934310:intron 30.0%
!! TACCTGTTTCTATTATGTCT+CGG - chr6_3:4105842-4105861 None:intergenic 30.0%
ATGACTATTGAACCCTTTAT+GGG - chr6_3:4106382-4106401 None:intergenic 30.0%
AATGACTATTGAACCCTTTA+TGG - chr6_3:4106383-4106402 None:intergenic 30.0%
TTCTGTGAAAATTGGGTTTA+CGG - chr6_3:4106469-4106488 None:intergenic 30.0%
CGATTCATTTCTGTGAAAAT+TGG - chr6_3:4106477-4106496 None:intergenic 30.0%
TGTAAACTTGTATACAAGAG+AGG + chr6_3:4106819-4106838 Msa0934310:intron 30.0%
TATAAGCAGTTTATCCAAAC+AGG - chr6_3:4106965-4106984 None:intergenic 30.0%
! TAATGAAATAAGGGCTTGTT+TGG - chr6_3:4107095-4107114 None:intergenic 30.0%
TTGAATACATAAAGAGGAAC+GGG + chr6_3:4107347-4107366 Msa0934310:CDS 30.0%
TGAAAAAGATTTCCCTTACA+AGG + chr6_3:4107378-4107397 Msa0934310:CDS 30.0%
GAAAAAGATTTCCCTTACAA+GGG + chr6_3:4107379-4107398 Msa0934310:CDS 30.0%
TTGCATAATGTTTGCATTGT+TGG + chr6_3:4107625-4107644 Msa0934310:CDS 30.0%
AGAATACATATGGGAACAAA+TGG + chr6_3:4107686-4107705 Msa0934310:CDS 30.0%
GAATACATATGGGAACAAAT+GGG + chr6_3:4107687-4107706 Msa0934310:CDS 30.0%
AATACATATGGGAACAAATG+GGG + chr6_3:4107688-4107707 Msa0934310:CDS 30.0%
!!! CTGCAAATGAGTTTTTTAAG+AGG - chr6_3:4107890-4107909 None:intergenic 30.0%
CTCTTAAAAAACTCATTTGC+AGG + chr6_3:4107888-4107907 Msa0934310:intron 30.0%
TGAATAGATTTATACCGGTA+AGG + chr6_3:4107974-4107993 Msa0934310:intron 30.0%
AAAGGTTATAAAGTCCTTAC+CGG - chr6_3:4107991-4108010 None:intergenic 30.0%
ACCTTTCTAAATAGAAGTTG+TGG + chr6_3:4108005-4108024 Msa0934310:intron 30.0%
! TTTTGCCCATGTAATAGTAA+AGG - chr6_3:4108512-4108531 Msa0934320:three_prime_UTR 30.0%
CATGTGTATTCCATATAGTA+TGG - chr6_3:4108613-4108632 Msa0934320:CDS 30.0%
!! ATGTCTGTTAAATTTTGGTC+AGG - chr6_3:4108741-4108760 Msa0934320:intron 30.0%
AATTAGGATACATCTGATGT+TGG - chr6_3:4108850-4108869 Msa0934320:intron 30.0%
GAGTAAATAACATGGAAATG+AGG + chr6_3:4108938-4108957 Msa0934310:intron 30.0%
ATGCACACAAAAAGAAATGA+AGG + chr6_3:4108984-4109003 Msa0934310:intron 30.0%
TTTCACACAAGAAAGATTGA+TGG - chr6_3:4109126-4109145 Msa0934320:intron 30.0%
! GTGAACAATATGAAGTATCA+TGG - chr6_3:4109181-4109200 Msa0934320:intron 30.0%
AACAGAAAAGGTTACAACAA+AGG + chr6_3:4109268-4109287 Msa0934310:intron 30.0%
!!! GTTATTTCTAGCATCAGTTT+TGG - chr6_3:4109333-4109352 Msa0934320:intron 30.0%
ATCTATCATTATGCAGCAAA+AGG + chr6_3:4110057-4110076 Msa0934310:intron 30.0%
TGCTGCATAATGATAGATAT+GGG - chr6_3:4110055-4110074 Msa0934320:intron 30.0%
TTGCTGCATAATGATAGATA+TGG - chr6_3:4110056-4110075 Msa0934320:intron 30.0%
ATCTATCATTATGCAGCAAA+AGG + chr6_3:4110057-4110076 Msa0934310:intron 30.0%
!! ATCATTCTAAAGTTCCAGAA+TGG + chr6_3:4110229-4110248 Msa0934310:intron 30.0%
!!! TTTAGGTTTTGAATCCATTC+TGG - chr6_3:4110246-4110265 Msa0934320:intron 30.0%
! ATGAGTATAGTGTAGTGTTT+TGG - chr6_3:4110315-4110334 Msa0934320:intron 30.0%
TAATATCTCATGTACGAAAG+TGG + chr6_3:4110609-4110628 Msa0934310:intron 30.0%
ATTCTTACTCAAAGTAGACA+AGG - chr6_3:4110828-4110847 Msa0934320:intron 30.0%
GTGGGTTTATTATATTGGAT+AGG - chr6_3:4110860-4110879 Msa0934320:intron 30.0%
!! AATAAAGAAAGTGATGGACA+TGG + chr6_3:4110914-4110933 Msa0934310:intron 30.0%
!! ATAAAGAAAGTGATGGACAT+GGG + chr6_3:4110915-4110934 Msa0934310:intron 30.0%
AGCAAGTTATTTAACATCAG+GGG - chr6_3:4110954-4110973 Msa0934320:intron 30.0%
CAGCAAGTTATTTAACATCA+GGG - chr6_3:4110955-4110974 Msa0934320:intron 30.0%
AGTAAAATAAACTCTCGGAA+TGG + chr6_3:4111254-4111273 Msa0934310:intron 30.0%
TTGCAAAAGAGAAAAATCAC+AGG + chr6_3:4111287-4111306 Msa0934310:intron 30.0%
TGCAAAAGAGAAAAATCACA+GGG + chr6_3:4111288-4111307 Msa0934310:intron 30.0%
!!! GTTTTGGAAAAAGTTCTTGA+TGG - chr6_3:4111618-4111637 Msa0934320:intron 30.0%
! CAAAATGTGTTTTGCAGATT+CGG - chr6_3:4111701-4111720 Msa0934320:intron 30.0%
!! AGATTTAAAACAGAAGTGCT+TGG + chr6_3:4111942-4111961 Msa0934310:intron 30.0%
CACAATCAGATTCAACAAAA+AGG + chr6_3:4112098-4112117 Msa0934310:intron 30.0%
!!! GGTTTTGTTTTCCAGTTTTA+GGG - chr6_3:4112179-4112198 Msa0934320:five_prime_UTR 30.0%
TGTGAAGGGAAAATTGAAAA+TGG + chr6_3:4112226-4112245 Msa0934310:intron 30.0%
GTGAAGGGAAAATTGAAAAT+GGG + chr6_3:4112227-4112246 Msa0934310:intron 30.0%
AAAGATGAAAGAAATTGTGG+AGG + chr6_3:4112385-4112404 Msa0934310:intron 30.0%
! AAATTGTGGAGGACATTTTT+GGG + chr6_3:4112396-4112415 Msa0934310:intron 30.0%
GGAAGAAGAAGATAATAGTA+AGG + chr6_3:4112439-4112458 Msa0934310:intron 30.0%
!!! TTTTGTCATTTTGAGTGCAT+TGG + chr6_3:4112688-4112707 Msa0934310:intron 30.0%
!! ATTTTGAGTGCATTGGATTA+GGG + chr6_3:4112695-4112714 Msa0934310:intron 30.0%
! TGTTTTGTGGTATATATTGC+AGG + chr6_3:4112822-4112841 Msa0934310:intron 30.0%
TTCTCTTTCTTAAACTACTG+TGG + chr6_3:4112908-4112927 Msa0934310:intron 30.0%
! TGTCACAATTTTACATCAAG+TGG - chr6_3:4113258-4113277 None:intergenic 30.0%
! CTTTAACTTAGTTTAGTGTC+AGG + chr6_3:4113584-4113603 Msa0934310:intron 30.0%
TACGCACTAATTGATACATA+TGG - chr6_3:4113618-4113637 None:intergenic 30.0%
ATTAGAGTTTACATGATGAG+AGG - chr6_3:4113751-4113770 None:intergenic 30.0%
ATATCATCATCAGACAATTG+TGG - chr6_3:4113852-4113871 None:intergenic 30.0%
! CAATTGTCTGATGATGATAT+TGG + chr6_3:4113852-4113871 Msa0934310:CDS 30.0%
ATGTAAAACTCGTGTTCAAT+AGG - chr6_3:4113975-4113994 None:intergenic 30.0%
TTAGAATTGGATATGCACAT+TGG + chr6_3:4114058-4114077 Msa0934310:intron 30.0%
CCAGATAAATAAACAATCCA+AGG - chr6_3:4114320-4114339 None:intergenic 30.0%
CCTTGGATTGTTTATTTATC+TGG + chr6_3:4114317-4114336 Msa0934310:intron 30.0%
AAAAAAAACAGGGTAAGGAA+TGG - chr6_3:4114442-4114461 None:intergenic 30.0%
!! TTTGGGCATTGACAAATATT+TGG + chr6_3:4114587-4114606 Msa0934310:three_prime_UTR 30.0%
CTTATTGAAGGACAACTAAT+AGG - chr6_3:4114637-4114656 None:intergenic 30.0%
AATCCCACAAAGAATAATGT+TGG - chr6_3:4114725-4114744 None:intergenic 30.0%
ATAGAGAATTGCATATTTCG+TGG - chr6_3:4114775-4114794 None:intergenic 30.0%
TCTATGCAACGAATTTCAAA+TGG + chr6_3:4114790-4114809 Msa0934310:three_prime_UTR 30.0%
CTATGCAACGAATTTCAAAT+GGG + chr6_3:4114791-4114810 Msa0934310:three_prime_UTR 30.0%
!!! GTTTTAAAAAACTGGTTGGC+TGG - chr6_3:4103732-4103751 None:intergenic 35.0%
GTTAACGTCATCCATTAGTT+TGG - chr6_3:4103755-4103774 None:intergenic 35.0%
GACGTTAACAAAGACAAAAC+TGG + chr6_3:4103766-4103785 Msa0934310:five_prime_UTR 35.0%
! TGTAACCTGCTATGACTTTT+AGG - chr6_3:4103802-4103821 None:intergenic 35.0%
TACTTACTCAGATCTAAGAG+AGG - chr6_3:4103846-4103865 None:intergenic 35.0%
CATCTACTTATGGCTTATCA+TGG + chr6_3:4103941-4103960 Msa0934310:five_prime_UTR 35.0%
!! CTGTGCTTATTTTTCATAGG+AGG + chr6_3:4104825-4104844 Msa0934310:intron 35.0%
TCTAAATCTAATACTCCCTC+CGG + chr6_3:4105030-4105049 Msa0934310:intron 35.0%
AACCAAATAAATACTCCCTC+CGG - chr6_3:4105183-4105202 None:intergenic 35.0%
!! GAGGGAGTATTTATTTGGTT+TGG + chr6_3:4105183-4105202 Msa0934310:intron 35.0%
TAAAAAGAACCAATGCCCTA+AGG + chr6_3:4105293-4105312 Msa0934310:intron 35.0%
AAAAAGAACCAATGCCCTAA+GGG + chr6_3:4105294-4105313 Msa0934310:intron 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + chr6_3:4105508-4105527 Msa0934310:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr6_3:4105619-4105638 Msa0934310:intron 35.0%
! TTTTATCAAGTCACACCTCA+AGG - chr6_3:4105637-4105656 None:intergenic 35.0%
!!! CACCACACTACTTTTTATGA+AGG + chr6_3:4105659-4105678 Msa0934310:intron 35.0%
CACCTTCATAAAAAGTAGTG+TGG - chr6_3:4105664-4105683 None:intergenic 35.0%
GTTGCATTACAATTACGTGT+GGG - chr6_3:4105970-4105989 None:intergenic 35.0%
AGTTGCATTACAATTACGTG+TGG - chr6_3:4105971-4105990 None:intergenic 35.0%
CACTAAGGTTATGGATGAAT+TGG - chr6_3:4106206-4106225 None:intergenic 35.0%
AGCTAACATAACATTGGGTT+AGG + chr6_3:4106332-4106351 Msa0934310:intron 35.0%
TGTGTTGTGTTTGTTCGATA+GGG - chr6_3:4106441-4106460 None:intergenic 35.0%
! GATTAATAACCGGATTTGCT+CGG + chr6_3:4106496-4106515 Msa0934310:CDS 35.0%
! ATTAATAACCGGATTTGCTC+GGG + chr6_3:4106497-4106516 Msa0934310:CDS 35.0%
! GAAGAGAGAGAATTTTATCG+TGG + chr6_3:4106600-4106619 Msa0934310:CDS 35.0%
CAATCTTTCCTTGCAGTTTA+AGG + chr6_3:4106729-4106748 Msa0934310:intron 35.0%
! TTCCTTGCAGTTTAAGGTTT+AGG + chr6_3:4106735-4106754 Msa0934310:intron 35.0%
! TCCTTGCAGTTTAAGGTTTA+GGG + chr6_3:4106736-4106755 Msa0934310:intron 35.0%
GCTACTTATTGTGGTTGATT+TGG - chr6_3:4106875-4106894 None:intergenic 35.0%
AGTGCTTGTTTCAATCACAT+AGG + chr6_3:4106938-4106957 Msa0934310:intron 35.0%
GTGCTTGTTTCAATCACATA+GGG + chr6_3:4106939-4106958 Msa0934310:intron 35.0%
ATCAAGTAGCACTAAACACA+AGG - chr6_3:4107124-4107143 None:intergenic 35.0%
TATATGTTTGGGTCTACCAA+AGG + chr6_3:4107172-4107191 Msa0934310:intron 35.0%
GCTTAATTCTTCAAGAACTC+CGG - chr6_3:4107254-4107273 None:intergenic 35.0%
TTGTCTCTTTACCCTTGTAA+GGG - chr6_3:4107393-4107412 None:intergenic 35.0%
AACGTATATCATTGCGGTAA+CGG - chr6_3:4107527-4107546 None:intergenic 35.0%
GGGATTAACGTATATCATTG+CGG - chr6_3:4107533-4107552 None:intergenic 35.0%
AATATAAGGATGGGATTTGG+AGG + chr6_3:4107566-4107585 Msa0934310:CDS 35.0%
ATACATATGGGAACAAATGG+GGG + chr6_3:4107689-4107708 Msa0934310:CDS 35.0%
! ATGTGGATTGAAAGAGATTG+CGG + chr6_3:4107724-4107743 Msa0934310:CDS 35.0%
GAGGAAATTAACGAACTAGT+AGG + chr6_3:4107919-4107938 Msa0934310:CDS 35.0%
GCCACAACTTCTATTTAGAA+AGG - chr6_3:4108009-4108028 None:intergenic 35.0%
CTAAATTCAGCGTGTACTTT+AGG - chr6_3:4108051-4108070 None:intergenic 35.0%
GAAATCAGCTGCAAAAAAGA+AGG - chr6_3:4108126-4108145 None:intergenic 35.0%
! ACAAGTTTTCTACGCATTTG+AGG - chr6_3:4108450-4108469 Msa0934320:three_prime_UTR 35.0%
GTAGTGATTGCCATACTATA+TGG + chr6_3:4108600-4108619 Msa0934310:intron 35.0%
TTTATCTCAGAGTCTGTAGT+AGG + chr6_3:4108791-4108810 Msa0934310:intron 35.0%
ACAAGAAAGATTGATGGAGT+TGG - chr6_3:4109120-4109139 Msa0934320:intron 35.0%
AGTTTATATAAGTGGATGCC+TGG + chr6_3:4109230-4109249 Msa0934310:intron 35.0%
GGATGTGTATTGAATGGTAT+GGG - chr6_3:4109429-4109448 Msa0934320:intron 35.0%
TGGATGTGTATTGAATGGTA+TGG - chr6_3:4109430-4109449 Msa0934320:intron 35.0%
TTAGTTCATGCTTCAATACC+AGG - chr6_3:4109485-4109504 Msa0934320:intron 35.0%
AGGAAAGAAGACATGATGTT+GGG - chr6_3:4109509-4109528 Msa0934320:intron 35.0%
TAGGAAAGAAGACATGATGT+TGG - chr6_3:4109510-4109529 Msa0934320:intron 35.0%
TGCAAAGTACACCAATATGT+TGG + chr6_3:4109631-4109650 Msa0934310:intron 35.0%
GCATCAATTAGCCAACATAT+TGG - chr6_3:4109645-4109664 Msa0934320:intron 35.0%
! ATGTTGGCTAATTGATGCTT+CGG + chr6_3:4109647-4109666 Msa0934310:intron 35.0%
GACATCTTTGTAGTCAAAGA+CGG - chr6_3:4109849-4109868 Msa0934320:intron 35.0%
!! TTGATTCTAAAACTCCAGCA+TGG + chr6_3:4109886-4109905 Msa0934310:intron 35.0%
!!! TTTTAAAACCACTACCATGC+TGG - chr6_3:4109903-4109922 Msa0934320:intron 35.0%
!!! AGTGTAGTGTTTTGGTTGAT+TGG - chr6_3:4110307-4110326 Msa0934320:intron 35.0%
CATATGAGAGTTGTTGTCAT+AGG - chr6_3:4110414-4110433 Msa0934320:intron 35.0%
TCATTCATGTGATCTTTGTG+TGG - chr6_3:4110470-4110489 Msa0934320:intron 35.0%
TTACTCAAAGTAGACAAGGT+GGG - chr6_3:4110824-4110843 Msa0934320:intron 35.0%
!! TAAAGAAAGTGATGGACATG+GGG + chr6_3:4110916-4110935 Msa0934310:intron 35.0%
GCAGCAAGTTATTTAACATC+AGG - chr6_3:4110956-4110975 Msa0934320:intron 35.0%
! GAAAATTGATAGCAGAAGCA+TGG - chr6_3:4110980-4110999 Msa0934320:intron 35.0%
TGAACTTTACTTGAACTGAG+TGG + chr6_3:4111063-4111082 Msa0934310:intron 35.0%
AGAGAAAAATCACAGGGTAA+AGG + chr6_3:4111294-4111313 Msa0934310:intron 35.0%
ATGTACTTCTGTCTATTCTG+AGG - chr6_3:4111326-4111345 Msa0934320:intron 35.0%
! CAGAATAGACAGAAGTACAT+TGG + chr6_3:4111326-4111345 Msa0934310:intron 35.0%
! TTTTTCTCTTTGGCAGAAGT+TGG - chr6_3:4111376-4111395 Msa0934320:intron 35.0%
! GAAGTTCTCCTTCAAAGTTT+TGG - chr6_3:4111634-4111653 Msa0934320:CDS 35.0%
AAACAAAGGACATACCTGTT+TGG + chr6_3:4111727-4111746 Msa0934310:intron 35.0%
CAGTGTGTTTATCAATTCTG+TGG - chr6_3:4111850-4111869 Msa0934320:intron 35.0%
TTTGTTGAATCTGATTGTGC+AGG - chr6_3:4112097-4112116 Msa0934320:five_prime_UTR 35.0%
!!! CGGTTTTGTTTTCCAGTTTT+AGG - chr6_3:4112180-4112199 Msa0934320:five_prime_UTR 35.0%
AAAACCGTAAAAGAGAGAGA+GGG + chr6_3:4112193-4112212 Msa0934310:intron 35.0%
! GAAATTGTGGAGGACATTTT+TGG + chr6_3:4112395-4112414 Msa0934310:intron 35.0%
! AATTGTGGAGGACATTTTTG+GGG + chr6_3:4112397-4112416 Msa0934310:intron 35.0%
AGAAGATAATAGTAAGGCAG+AGG + chr6_3:4112445-4112464 Msa0934310:intron 35.0%
!! TCATTTTGGGTGCAGTATAA+GGG + chr6_3:4112662-4112681 Msa0934310:intron 35.0%
!! CATTTTGAGTGCATTGGATT+AGG + chr6_3:4112694-4112713 Msa0934310:intron 35.0%
AGCTTAGTGTTACGTGAATT+TGG + chr6_3:4113232-4113251 Msa0934310:intron 35.0%
TGGTTTAAGTCTCAAACACT+TGG + chr6_3:4113418-4113437 Msa0934310:intron 35.0%
TGAGATGGTACAGAATTGAT+TGG - chr6_3:4113512-4113531 None:intergenic 35.0%
CTAAACAATACCAGATGAGA+TGG - chr6_3:4113527-4113546 None:intergenic 35.0%
TGCATATCCAATTCTAACAG+GGG - chr6_3:4114055-4114074 None:intergenic 35.0%
GTGCATATCCAATTCTAACA+GGG - chr6_3:4114056-4114075 None:intergenic 35.0%
TGTGCATATCCAATTCTAAC+AGG - chr6_3:4114057-4114076 None:intergenic 35.0%
TTGAAAGGAAGTTGTAGCAT+TGG + chr6_3:4114261-4114280 Msa0934310:intron 35.0%
TGAAAGGAAGTTGTAGCATT+GGG + chr6_3:4114262-4114281 Msa0934310:intron 35.0%
! TGGCAAATTTGAAGTCAACA+GGG + chr6_3:4114536-4114555 Msa0934310:CDS 35.0%
AGTTCAGAAACGCTTATTGA+AGG - chr6_3:4114649-4114668 None:intergenic 35.0%
AGACAACCTGGTAATAGTAT+TGG - chr6_3:4114686-4114705 None:intergenic 35.0%
CTGTACCTAAAAGTCATAGC+AGG + chr6_3:4103794-4103813 Msa0934310:five_prime_UTR 40.0%
GTTACTGTGCCTATTTCCAT+AGG + chr6_3:4103963-4103982 Msa0934310:five_prime_UTR 40.0%
AACCAAATCGATGATTGGGT+GGG - chr6_3:4104013-4104032 None:intergenic 40.0%
AAACCAAATCGATGATTGGG+TGG - chr6_3:4104014-4104033 None:intergenic 40.0%
GTGTGATGAAGCCTTGAATT+TGG - chr6_3:4104450-4104469 None:intergenic 40.0%
AAGTAGATACACTGCAACGT+TGG - chr6_3:4104788-4104807 None:intergenic 40.0%
CGTTGCAGTGTATCTACTTA+TGG + chr6_3:4104789-4104808 Msa0934310:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr6_3:4105048-4105067 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr6_3:4105049-4105068 None:intergenic 40.0%
! TCTTTTGTAAATAGGACCGG+AGG + chr6_3:4105164-4105183 Msa0934310:intron 40.0%
! CTTTTGTAAATAGGACCGGA+GGG + chr6_3:4105165-4105184 Msa0934310:intron 40.0%
!!! TTTTGGTTTCCTTAGGGCAA+TGG - chr6_3:4105234-4105253 None:intergenic 40.0%
AAATATTGCCCTTAGGGCAT+TGG - chr6_3:4105305-4105324 None:intergenic 40.0%
GACCGAGACATAATAGAAAC+AGG + chr6_3:4105837-4105856 Msa0934310:five_prime_UTR 40.0%
AATGGCATGAAGCACAATGA+TGG + chr6_3:4105864-4105883 Msa0934310:intron 40.0%
TACGTGTGGGAGATGTAAAA+TGG - chr6_3:4105957-4105976 None:intergenic 40.0%
TTGAACCCTTTATGGGCTTA+TGG - chr6_3:4106375-4106394 None:intergenic 40.0%
CTGTGTTGTGTTTGTTCGAT+AGG - chr6_3:4106442-4106461 None:intergenic 40.0%
GTGAAAATTGGGTTTACGGT+CGG - chr6_3:4106465-4106484 None:intergenic 40.0%
GCGGCTTGAATCATAATTCT+TGG - chr6_3:4106556-4106575 None:intergenic 40.0%
AAGGCTTTCGACAGCATATA+TGG - chr6_3:4107218-4107237 None:intergenic 40.0%
TCTTGAAGAATTAAGCGCTC+AGG + chr6_3:4107258-4107277 Msa0934310:CDS 40.0%
AACGGTAACAAGGGATGTAA+CGG + chr6_3:4107304-4107323 Msa0934310:CDS 40.0%
! TAACGGAGGTTTTCCTCAAA+AGG + chr6_3:4107321-4107340 Msa0934310:CDS 40.0%
CTTGTCTCTTTACCCTTGTA+AGG - chr6_3:4107394-4107413 None:intergenic 40.0%
! AGATGTCGTCTCTCTAAAAG+AGG + chr6_3:4107412-4107431 Msa0934310:CDS 40.0%
! GATGTCGTCTCTCTAAAAGA+GGG + chr6_3:4107413-4107432 Msa0934310:CDS 40.0%
GGGAAGAGAGTTAAAATCAC+TGG + chr6_3:4107433-4107452 Msa0934310:CDS 40.0%
ACTGGTCATGTAAAAGTTCC+TGG + chr6_3:4107451-4107470 Msa0934310:CDS 40.0%
CATGTAAAAGTTCCTGGTCA+TGG + chr6_3:4107457-4107476 Msa0934310:CDS 40.0%
AAAGTTCCTGGTCATGGAAA+CGG + chr6_3:4107463-4107482 Msa0934310:CDS 40.0%
ACGTATATCATTGCGGTAAC+GGG - chr6_3:4107526-4107545 None:intergenic 40.0%
CGAACTCGAACAATTGTTGA+TGG + chr6_3:4107598-4107617 Msa0934310:CDS 40.0%
! AGAGATTGCGGATTACCATA+TGG + chr6_3:4107736-4107755 Msa0934310:CDS 40.0%
! ATTCAGCGTGTACTTTAGGA+GGG - chr6_3:4108047-4108066 None:intergenic 40.0%
AATTCAGCGTGTACTTTAGG+AGG - chr6_3:4108048-4108067 None:intergenic 40.0%
!!! CTTTTTTGCAGCTGATTTCG+AGG + chr6_3:4108127-4108146 Msa0934310:intron 40.0%
TATTGCATACTCAATGGTCC+CGG - chr6_3:4108236-4108255 None:intergenic 40.0%
CAATGAGACAAACATACGCT+TGG + chr6_3:4108347-4108366 Msa0934310:intron 40.0%
CAAATATTGCATTGAGCCCA+TGG - chr6_3:4108562-4108581 Msa0934320:three_prime_UTR 40.0%
GATGGTGCAACTATCAAACT+CGG - chr6_3:4108652-4108671 Msa0934320:CDS 40.0%
AAACAACTCAGGTCTAGAGA+TGG - chr6_3:4108670-4108689 Msa0934320:CDS 40.0%
GAAAGCTCTACAAACAACTC+AGG - chr6_3:4108681-4108700 Msa0934320:CDS 40.0%
TTATATAAGTGGATGCCTGG+AGG + chr6_3:4109233-4109252 Msa0934310:intron 40.0%
TATATAAGTGGATGCCTGGA+GGG + chr6_3:4109234-4109253 Msa0934310:intron 40.0%
GGTTGGAACTCAAACAGAAA+AGG + chr6_3:4109256-4109275 Msa0934310:intron 40.0%
!! TCAGTTTTGGCATAAGGTGT+GGG - chr6_3:4109320-4109339 Msa0934320:intron 40.0%
!! ATCAGTTTTGGCATAAGGTG+TGG - chr6_3:4109321-4109340 Msa0934320:intron 40.0%
!! CTAGCATCAGTTTTGGCATA+AGG - chr6_3:4109326-4109345 Msa0934320:intron 40.0%
ACGCATGGATGTGTATTGAA+TGG - chr6_3:4109435-4109454 Msa0934320:intron 40.0%
TGTCTCATGATCTCTCAGTT+TGG - chr6_3:4109540-4109559 Msa0934320:intron 40.0%
GATAGATATGAGCACCTATG+TGG - chr6_3:4110044-4110063 Msa0934320:intron 40.0%
ATGCAGCAAAAGGAGAAGAA+AGG + chr6_3:4110132-4110151 Msa0934310:intron 40.0%
AAAGGAGAAGAAAGGAGGTA+TGG + chr6_3:4110140-4110159 Msa0934310:intron 40.0%
! TTTGTGTGGTTGACTTCTAC+AGG - chr6_3:4110456-4110475 Msa0934320:intron 40.0%
ATGGAATCTTCACATAGTCG+TGG + chr6_3:4110673-4110692 Msa0934310:intron 40.0%
TGGAATCTTCACATAGTCGT+GGG + chr6_3:4110674-4110693 Msa0934310:intron 40.0%
ATTACTGACAGTTGGGTGAT+TGG + chr6_3:4110721-4110740 Msa0934310:intron 40.0%
TTGGGTGATTGGAACAAACT+TGG + chr6_3:4110732-4110751 Msa0934310:intron 40.0%
GTGATTGGAACAAACTTGGA+AGG + chr6_3:4110736-4110755 Msa0934310:intron 40.0%
CTTACTCAAAGTAGACAAGG+TGG - chr6_3:4110825-4110844 Msa0934320:intron 40.0%
TTCCAACATGCTTCTGCTAT+CGG + chr6_3:4110997-4111016 Msa0934310:intron 40.0%
ATGGAAATACGCTACCAAAC+AGG - chr6_3:4111744-4111763 Msa0934320:CDS 40.0%
CACAAACACACGTTTGATCA+TGG - chr6_3:4111763-4111782 Msa0934320:exon 40.0%
CATGATCAAACGTGTGTTTG+TGG + chr6_3:4111761-4111780 Msa0934310:intron 40.0%
ATCAAACGTGTGTTTGTGGA+TGG + chr6_3:4111765-4111784 Msa0934310:intron 40.0%
GGTTGTCAGATTCAAGGAAT+GGG - chr6_3:4112076-4112095 Msa0934320:five_prime_UTR 40.0%
AGGTTGTCAGATTCAAGGAA+TGG - chr6_3:4112077-4112096 Msa0934320:five_prime_UTR 40.0%
CAAAACCGTAAAAGAGAGAG+AGG + chr6_3:4112192-4112211 Msa0934310:intron 40.0%
!! ATTGTGGAGGACATTTTTGG+GGG + chr6_3:4112398-4112417 Msa0934310:intron 40.0%
!! ACATTTTTGGGGGAAATGAG+TGG + chr6_3:4112408-4112427 Msa0934310:intron 40.0%
! AATCCTATTGGCTAGTTGTG+TGG + chr6_3:4112581-4112600 Msa0934310:intron 40.0%
!! GTCATTTTGGGTGCAGTATA+AGG + chr6_3:4112661-4112680 Msa0934310:intron 40.0%
AGGAATCAATCAGACTACCT+TGG + chr6_3:4112720-4112739 Msa0934310:intron 40.0%
ACAGTGTGTGTACGTATGTT+TGG + chr6_3:4113275-4113294 Msa0934310:intron 40.0%
TCAAGCAATGCATTCACTAG+AGG - chr6_3:4113338-4113357 None:intergenic 40.0%
!! CTCAAACACTTGGTTTTTCC+AGG + chr6_3:4113428-4113447 Msa0934310:intron 40.0%
CAATTCTGTACCATCTCATC+TGG + chr6_3:4113514-4113533 Msa0934310:CDS 40.0%
TATTTACAGGTGGGACCAAA+AGG + chr6_3:4113771-4113790 Msa0934310:intron 40.0%
! TCAGTAGCAACTTCACCTTT+TGG - chr6_3:4113789-4113808 None:intergenic 40.0%
ATCATCAGACAATTGTGGAG+TGG - chr6_3:4113847-4113866 None:intergenic 40.0%
ATTGCTGTCTCTGCATATGA+TGG - chr6_3:4113885-4113904 None:intergenic 40.0%
AAAGCTTCCCCTGTTAGAAT+TGG + chr6_3:4114045-4114064 Msa0934310:intron 40.0%
GAAAGGAAGTTGTAGCATTG+GGG + chr6_3:4114263-4114282 Msa0934310:intron 40.0%
GAAAATGATAGGTCTTCCCT+TGG + chr6_3:4114300-4114319 Msa0934310:intron 40.0%
!!! TTTTTTTTGTAGGGGGTACC+TGG + chr6_3:4114471-4114490 Msa0934310:intron 40.0%
ACAATTACTGATCATCGTGC+TGG + chr6_3:4114516-4114535 Msa0934310:CDS 40.0%
! CTGGCAAATTTGAAGTCAAC+AGG + chr6_3:4114535-4114554 Msa0934310:CDS 40.0%
GACAACTAATAGGCTCAACT+AGG - chr6_3:4114627-4114646 None:intergenic 40.0%
ACTCAGATCTAAGAGAGGAG+CGG - chr6_3:4103841-4103860 None:intergenic 45.0%
CATCTTCTCAATCAACGTGC+AGG + chr6_3:4103916-4103935 Msa0934310:intron 45.0%
ACTGTGCCTATTTCCATAGG+AGG + chr6_3:4103966-4103985 Msa0934310:five_prime_UTR 45.0%
CTGTGCCTATTTCCATAGGA+GGG + chr6_3:4103967-4103986 Msa0934310:five_prime_UTR 45.0%
TGTGCCTATTTCCATAGGAG+GGG + chr6_3:4103968-4103987 Msa0934310:five_prime_UTR 45.0%
ACAACCCCTCCTATGGAAAT+AGG - chr6_3:4103975-4103994 None:intergenic 45.0%
! ATCCCACCCAATCATCGATT+TGG + chr6_3:4104008-4104027 Msa0934310:five_prime_UTR 45.0%
AAATAAATACCTGGGTCGGG+TGG - chr6_3:4104107-4104126 None:intergenic 45.0%
TAGTACTACATACCTGGGTC+GGG - chr6_3:4104971-4104990 None:intergenic 45.0%
CTAGTACTACATACCTGGGT+CGG - chr6_3:4104972-4104991 None:intergenic 45.0%
!! GACCGGAGGGAGTATTTATT+TGG + chr6_3:4105178-4105197 Msa0934310:intron 45.0%
TCTTGCTAACCATTGCCCTA+AGG + chr6_3:4105222-4105241 Msa0934310:intron 45.0%
CGCTGTTGTGTGATTTGACA+TGG + chr6_3:4106179-4106198 Msa0934310:intron 45.0%
TGTGTGCCATAAGCCCATAA+AGG + chr6_3:4106366-4106385 Msa0934310:intron 45.0%
GTGTGCCATAAGCCCATAAA+GGG + chr6_3:4106367-4106386 Msa0934310:intron 45.0%
TTATCGTGGTCGCATTGTTC+AGG + chr6_3:4106614-4106633 Msa0934310:CDS 45.0%
TATCGTGGTCGCATTGTTCA+GGG + chr6_3:4106615-4106634 Msa0934310:CDS 45.0%
TCGCTCCGTTACATATCCTA+GGG + chr6_3:4106680-4106699 Msa0934310:CDS 45.0%
GGCAACCCTAGGATATGTAA+CGG - chr6_3:4106688-4106707 None:intergenic 45.0%
TTACTCACCACATTCGCCTT+GGG - chr6_3:4106709-4106728 None:intergenic 45.0%
GCCCTAAACCTTAAACTGCA+AGG - chr6_3:4106740-4106759 None:intergenic 45.0%
TCAATCACATAGGGCCTGTT+TGG + chr6_3:4106948-4106967 Msa0934310:intron 45.0%
GACAGCATATATGGAAGCCA+GGG - chr6_3:4107209-4107228 None:intergenic 45.0%
! AGCCTTATCCACATCAAGAC+CGG + chr6_3:4107232-4107251 Msa0934310:CDS 45.0%
GAAATCGTGTCTTGTGACAG+AGG + chr6_3:4107280-4107299 Msa0934310:CDS 45.0%
GTGTCTTGTGACAGAGGTAA+CGG + chr6_3:4107286-4107305 Msa0934310:CDS 45.0%
! TGACAGAGGTAACGGTAACA+AGG + chr6_3:4107294-4107313 Msa0934310:CDS 45.0%
! GACAGAGGTAACGGTAACAA+GGG + chr6_3:4107295-4107314 Msa0934310:CDS 45.0%
GTGACGAGAGTCATTTGCTT+CGG + chr6_3:4107485-4107504 Msa0934310:CDS 45.0%
TGACGAGAGTCATTTGCTTC+GGG + chr6_3:4107486-4107505 Msa0934310:CDS 45.0%
TAAGGATGGGATTTGGAGGA+AGG + chr6_3:4107570-4107589 Msa0934310:CDS 45.0%
ATATGGGAACAAATGGGGGA+TGG + chr6_3:4107693-4107712 Msa0934310:CDS 45.0%
TATGGGAACAAATGGGGGAT+GGG + chr6_3:4107694-4107713 Msa0934310:CDS 45.0%
CATCGAGAAGGATTTCGCAA+CGG - chr6_3:4107762-4107781 None:intergenic 45.0%
!! CAGGATAATGAGCATCGAGA+AGG - chr6_3:4107774-4107793 None:intergenic 45.0%
TGCTCATTATCCTGTGCTAG+AGG + chr6_3:4107780-4107799 Msa0934310:CDS 45.0%
AAGAAAGCTACCTCTAGCAC+AGG - chr6_3:4107793-4107812 None:intergenic 45.0%
AAAAAGCTCTTAGGCTGCTC+TGG - chr6_3:4107955-4107974 None:intergenic 45.0%
TGGACACTGAACAGTTTCAG+TGG + chr6_3:4108154-4108173 Msa0934310:CDS 45.0%
ATTGCATACTCAATGGTCCC+GGG - chr6_3:4108235-4108254 None:intergenic 45.0%
TTGATTTCTTGGGACGTGCT+TGG - chr6_3:4108766-4108785 Msa0934320:intron 45.0%
CATCTGATGTTGGTGTGCAA+AGG - chr6_3:4108840-4108859 Msa0934320:intron 45.0%
ATATAAGTGGATGCCTGGAG+GGG + chr6_3:4109235-4109254 Msa0934310:intron 45.0%
AAGGTTACAACAAAGGCCAC+AGG + chr6_3:4109275-4109294 Msa0934310:intron 45.0%
AGGTTACAACAAAGGCCACA+GGG + chr6_3:4109276-4109295 Msa0934310:intron 45.0%
! TAAGGAGTTAAGTTGCCCTG+TGG - chr6_3:4109294-4109313 Msa0934320:intron 45.0%
!! CAGTTTTGGCATAAGGTGTG+GGG - chr6_3:4109319-4109338 Msa0934320:intron 45.0%
ATTCTAATGTGTGGCACGCA+TGG - chr6_3:4109450-4109469 Msa0934320:intron 45.0%
GCAAAATTCCTGCTGTGCAA+AGG + chr6_3:4109692-4109711 Msa0934310:intron 45.0%
! AGTTTTCTCCTTTGCACAGC+AGG - chr6_3:4109703-4109722 Msa0934320:intron 45.0%
ACAAAAAACGCAGTGGCATC+AGG + chr6_3:4109819-4109838 Msa0934310:intron 45.0%
CTAAAACTCCAGCATGGTAG+TGG + chr6_3:4109892-4109911 Msa0934310:intron 45.0%
GATAGATATGGGCACCTATG+TGG - chr6_3:4110109-4110128 Msa0934320:intron 45.0%
CAGCAAAAGGAGAAGAAAGG+AGG + chr6_3:4110135-4110154 Msa0934310:intron 45.0%
! TTAAGGCTGAAAGCACACAC+TGG + chr6_3:4110555-4110574 Msa0934310:intron 45.0%
CAAACTTGGAAGGCAGTACA+TGG + chr6_3:4110746-4110765 Msa0934310:intron 45.0%
TTCTCTTTGGCAGAAGTTGG+TGG - chr6_3:4111373-4111392 Msa0934320:intron 45.0%
!! TCTGGAGCTTTTGTAGATCG+CGG - chr6_3:4111796-4111815 Msa0934320:five_prime_UTR 45.0%
TAACTGCAGAAGCTTGGTTC+TGG - chr6_3:4111814-4111833 Msa0934320:five_prime_UTR 45.0%
CCATGTTAACTGCAGAAGCT+TGG - chr6_3:4111820-4111839 Msa0934320:five_prime_UTR 45.0%
CCAAGCTTCTGCAGTTAACA+TGG + chr6_3:4111817-4111836 Msa0934310:intron 45.0%
ATTCAAGGAATGGGTCGGTT+GGG - chr6_3:4112067-4112086 Msa0934320:five_prime_UTR 45.0%
GTCAGATTCAAGGAATGGGT+CGG - chr6_3:4112072-4112091 Msa0934320:five_prime_UTR 45.0%
TGTGCAGGTTGTCAGATTCA+AGG - chr6_3:4112082-4112101 Msa0934320:five_prime_UTR 45.0%
! AGCTCCCTCTCTCTCTTTTA+CGG - chr6_3:4112200-4112219 Msa0934320:five_prime_UTR 45.0%
AAAAGAGAGAGAGGGAGCTT+AGG + chr6_3:4112201-4112220 Msa0934310:intron 45.0%
AGGGAGCTTAGGTTTGTGAA+GGG + chr6_3:4112212-4112231 Msa0934310:intron 45.0%
!! TTTTGGGGGAAATGAGTGGA+AGG + chr6_3:4112412-4112431 Msa0934310:intron 45.0%
!! TAGTTGTGTGGTGGATCAGA+AGG + chr6_3:4112593-4112612 Msa0934310:intron 45.0%
!! AGTTGTGTGGTGGATCAGAA+GGG + chr6_3:4112594-4112613 Msa0934310:intron 45.0%
! GAGTGCATTGGATTAGGGTT+AGG + chr6_3:4112700-4112719 Msa0934310:intron 45.0%
CACGTGCTAATATCTATCGC+TGG + chr6_3:4113308-4113327 Msa0934310:intron 45.0%
CGCTTTCCTATTCTCCAAGA+GGG + chr6_3:4113451-4113470 Msa0934310:CDS 45.0%
CTATTCTCCAAGAGGGAAGA+GGG + chr6_3:4113458-4113477 Msa0934310:CDS 45.0%
! TGCGTATAGCTTGCCAGAAA+TGG + chr6_3:4114365-4114384 Msa0934310:intron 45.0%
CAGGGTAAGGAATGGAGAAA+GGG - chr6_3:4114434-4114453 None:intergenic 45.0%
ACAGGGTAAGGAATGGAGAA+AGG - chr6_3:4114435-4114454 None:intergenic 45.0%
!! AAAAATAAAATAAAAAATCA+AGG - chr6_3:4105757-4105776 None:intergenic 5.0%
!! TTATATTTATAAAATTCTTT+GGG - chr6_3:4107553-4107572 None:intergenic 5.0%
!! AAAAAAAAAAAAAAAAAACA+GGG - chr6_3:4114452-4114471 None:intergenic 5.0%
!! AAAAAAAAAAAAAAAAAAAC+AGG - chr6_3:4114453-4114472 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTGT+AGG + chr6_3:4114461-4114480 Msa0934310:intron 5.0%
!!! TTTTTTTTTTTTTTTTTGTA+GGG + chr6_3:4114462-4114481 Msa0934310:intron 5.0%
CGTGCAGGTGCATCTACTTA+TGG + chr6_3:4103931-4103950 Msa0934310:intron 50.0%
CAGATTGACAACCCCTCCTA+TGG - chr6_3:4103982-4104001 None:intergenic 50.0%
ATCGTGGTCGCATTGTTCAG+GGG + chr6_3:4106616-4106635 Msa0934310:CDS 50.0%
! GATATGTAACGGAGCGAGCA+TGG - chr6_3:4106677-4106696 None:intergenic 50.0%
CTCGCTCCGTTACATATCCT+AGG + chr6_3:4106679-4106698 Msa0934310:CDS 50.0%
ACATATCCTAGGGTTGCCCA+AGG + chr6_3:4106690-4106709 Msa0934310:CDS 50.0%
GTTACTCACCACATTCGCCT+TGG - chr6_3:4106710-4106729 None:intergenic 50.0%
CAGGGCATAGCAACATCCTT+TGG - chr6_3:4107191-4107210 None:intergenic 50.0%
CAAAGGATGTTGCTATGCCC+TGG + chr6_3:4107189-4107208 Msa0934310:intron 50.0%
CGACAGCATATATGGAAGCC+AGG - chr6_3:4107210-4107229 None:intergenic 50.0%
CTCCGGTCTTGATGTGGATA+AGG - chr6_3:4107237-4107256 None:intergenic 50.0%
CAAGAACTCCGGTCTTGATG+TGG - chr6_3:4107243-4107262 None:intergenic 50.0%
GGTAACAAGGGATGTAACGG+AGG + chr6_3:4107307-4107326 Msa0934310:CDS 50.0%
AGGATTTCGCAACGGCCATA+TGG - chr6_3:4107754-4107773 None:intergenic 50.0%
!! TCATTTGCAGGGCACTGAAG+AGG + chr6_3:4107900-4107919 Msa0934310:intron 50.0%
! GCAGCTGATTTCGAGGTTTG+TGG + chr6_3:4108134-4108153 Msa0934310:intron 50.0%
GGTGCAACTATCAAACTCGG+TGG - chr6_3:4108649-4108668 Msa0934320:CDS 50.0%
! CTCTCAGTTTGGTAGCAGCT+AGG - chr6_3:4109529-4109548 Msa0934320:intron 50.0%
CTTGGAAGGCAGTACATGGA+AGG + chr6_3:4110750-4110769 Msa0934310:intron 50.0%
! GTCCGATAGCAGAAGCATGT+TGG - chr6_3:4111002-4111021 Msa0934320:intron 50.0%
!! TTTGGCAGAAGTTGGTGGTG+AGG - chr6_3:4111368-4111387 Msa0934320:intron 50.0%
!! GATGGTGGATCAGGACTTAG+AGG - chr6_3:4112025-4112044 Msa0934320:five_prime_UTR 50.0%
TTGGGAGAAGGAACAACGCT+GGG - chr6_3:4112049-4112068 Msa0934320:five_prime_UTR 50.0%
GATTCAAGGAATGGGTCGGT+TGG - chr6_3:4112068-4112087 Msa0934320:five_prime_UTR 50.0%
GAGGGAGCTTAGGTTTGTGA+AGG + chr6_3:4112211-4112230 Msa0934310:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr6_3:4112475-4112494 Msa0934310:intron 50.0%
CCACCACACAACTAGCCAAT+AGG - chr6_3:4112587-4112606 None:intergenic 50.0%
! CCTATTGGCTAGTTGTGTGG+TGG + chr6_3:4112584-4112603 Msa0934310:intron 50.0%
!! TTGGAGAATAGGAAAGCGCC+TGG - chr6_3:4113449-4113468 None:intergenic 50.0%
GCGCTTTCCTATTCTCCAAG+AGG + chr6_3:4113450-4113469 Msa0934310:CDS 50.0%
CCTCTTCCCTCTTGGAGAAT+AGG - chr6_3:4113460-4113479 None:intergenic 50.0%
CCTATTCTCCAAGAGGGAAG+AGG + chr6_3:4113457-4113476 Msa0934310:CDS 50.0%
ATCTTTGCCCTCTTCCCTCT+TGG - chr6_3:4113468-4113487 None:intergenic 50.0%
GAAGTTGCTACTGAGCAACC+TGG + chr6_3:4113795-4113814 Msa0934310:CDS 50.0%
! GAAGTTGTAGCATTGGGGAC+CGG + chr6_3:4114268-4114287 Msa0934310:intron 50.0%
!!! TTTTTGTAGGGGGTACCTGG+AGG + chr6_3:4114474-4114493 Msa0934310:intron 50.0%
! TTTTATACGCCACCCGACCC+AGG + chr6_3:4104095-4104114 Msa0934310:five_prime_UTR 55.0%
! TTTTATACGCCACCCGACCC+AGG + chr6_3:4104095-4104114 Msa0934310:five_prime_UTR 55.0%
TACTACATACCTGGGTCGGG+TGG - chr6_3:4104968-4104987 None:intergenic 55.0%
! AACCGGATTTGCTCGGGTCT+TGG + chr6_3:4106503-4106522 Msa0934310:CDS 55.0%
! ACCGGATTTGCTCGGGTCTT+GGG + chr6_3:4106504-4106523 Msa0934310:CDS 55.0%
ACCCAAGACCCGAGCAAATC+CGG - chr6_3:4106508-4106527 None:intergenic 55.0%
TCGTGGTCGCATTGTTCAGG+GGG + chr6_3:4106617-4106636 Msa0934310:CDS 55.0%
TCGTCACCGTTTCCATGACC+AGG - chr6_3:4107472-4107491 None:intergenic 55.0%
!! GGGGGATGGGAGGTTTTATG+TGG + chr6_3:4107707-4107726 Msa0934310:CDS 55.0%
! GTTTGAGTTCCAACCCCTCC+AGG - chr6_3:4109251-4109270 Msa0934320:intron 55.0%
GGCATAAGGTGTGGGGCTTA+AGG - chr6_3:4109312-4109331 Msa0934320:intron 55.0%
GAGGTGGCAACTGCAACAAC+TGG - chr6_3:4112006-4112025 Msa0934320:five_prime_UTR 55.0%
GGTGGATCAGGACTTAGAGG+TGG - chr6_3:4112022-4112041 Msa0934320:five_prime_UTR 55.0%
GAAGGAACAACGCTGGGAGA+TGG - chr6_3:4112043-4112062 Msa0934320:five_prime_UTR 55.0%
GTTGGGAGAAGGAACAACGC+TGG - chr6_3:4112050-4112069 Msa0934320:five_prime_UTR 55.0%
TGGGGGAAATGAGTGGAAGG+AGG + chr6_3:4112415-4112434 Msa0934310:intron 55.0%
GGGAAATGAGTGGAAGGAGG+TGG + chr6_3:4112418-4112437 Msa0934310:intron 55.0%
GAGAGAGAGAGAGAGAGAGG+AGG + chr6_3:4112482-4112501 Msa0934310:intron 55.0%
GTGGCAACAGCAGATGCCAT+GGG - chr6_3:4113828-4113847 None:intergenic 55.0%
AGTGGCAACAGCAGATGCCA+TGG - chr6_3:4113829-4113848 None:intergenic 55.0%
AGAAATGGCCACCGTTGCTG+CGG + chr6_3:4114380-4114399 Msa0934310:intron 55.0%
! GGATTTGCTCGGGTCTTGGG+TGG + chr6_3:4106507-4106526 Msa0934310:CDS 60.0%
! CGTCTCTGACTTGCCAGACG+AGG + chr6_3:4106641-4106660 Msa0934310:CDS 60.0%
ACTTGCCAGACGAGGTCGAC+TGG + chr6_3:4106649-4106668 Msa0934310:CDS 60.0%
CATTCGCCTTGGGCAACCCT+AGG - chr6_3:4106699-4106718 None:intergenic 60.0%
AGGGTTGCCCAAGGCGAATG+TGG + chr6_3:4106699-4106718 Msa0934310:CDS 60.0%
GGGAACAAATGGGGGATGGG+AGG + chr6_3:4107697-4107716 Msa0934310:CDS 60.0%
AATGGTCCCGGGCGATAGCA+CGG - chr6_3:4108224-4108243 None:intergenic 60.0%
AAGTGGATGCCTGGAGGGGT+TGG + chr6_3:4109239-4109258 Msa0934310:intron 60.0%
!! ACGCTGGGAGATGGTGGATC+AGG - chr6_3:4112034-4112053 Msa0934320:five_prime_UTR 60.0%
GGAACAACGCTGGGAGATGG+TGG - chr6_3:4112040-4112059 Msa0934320:five_prime_UTR 60.0%
GGAATGGGTCGGTTGGGAGA+AGG - chr6_3:4112061-4112080 Msa0934320:five_prime_UTR 60.0%
GCAACCTGGCAAGAGTCCCA+TGG + chr6_3:4113809-4113828 Msa0934310:CDS 60.0%
GATGCCATGGGACTCTTGCC+AGG - chr6_3:4113816-4113835 None:intergenic 60.0%
GCAGCAACGGTGGCCATTTC+TGG - chr6_3:4114381-4114400 None:intergenic 60.0%
!! TTGTAGGGGGTACCTGGAGG+TGG + chr6_3:4114477-4114496 Msa0934310:intron 60.0%
GATGCATCCTGACCACCTCC+AGG - chr6_3:4114492-4114511 None:intergenic 60.0%
! TGGTGCCAGTCGACCTCGTC+TGG - chr6_3:4106657-4106676 None:intergenic 65.0%
TCTTGCCCCGTGCTATCGCC+CGG + chr6_3:4108214-4108233 Msa0934310:intron 65.0%
ATGGTCCCGGGCGATAGCAC+GGG - chr6_3:4108223-4108242 None:intergenic 65.0%
!! ACTGGTGGTGGCCGCAGCAA+CGG - chr6_3:4114394-4114413 None:intergenic 65.0%
CTTGCCCCGTGCTATCGCCC+GGG + chr6_3:4108215-4108234 Msa0934310:intron 70.0%
TGGTCCCGGGCGATAGCACG+GGG - chr6_3:4108222-4108241 None:intergenic 70.0%
!! GGGGGTACCTGGAGGTGGTC+AGG + chr6_3:4114482-4114501 Msa0934310:intron 70.0%
! GGTGGTGGCCGCAGCAACGG+TGG - chr6_3:4114391-4114410 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 4103719 4114860 4103719 ID=Msa0934310;Name=Msa0934310
chr6_3 mRNA 4103719 4114860 4103719 ID=Msa0934310-mRNA-1;Parent=Msa0934310;Name=Msa0934310-mRNA-1;_AED=0.28;_eAED=0.28;_QI=532|1|1|1|0.63|0.58|12|291|434
chr6_3 exon 4103719 4103858 4103719 ID=Msa0934310-mRNA-1:exon:1265;Parent=Msa0934310-mRNA-1
chr6_3 exon 4103938 4104116 4103938 ID=Msa0934310-mRNA-1:exon:1266;Parent=Msa0934310-mRNA-1
chr6_3 exon 4104844 4104977 4104844 ID=Msa0934310-mRNA-1:exon:1267;Parent=Msa0934310-mRNA-1
chr6_3 exon 4105782 4105858 4105782 ID=Msa0934310-mRNA-1:exon:1268;Parent=Msa0934310-mRNA-1
chr6_3 exon 4106487 4106720 4106487 ID=Msa0934310-mRNA-1:exon:1269;Parent=Msa0934310-mRNA-1
chr6_3 exon 4107194 4107801 4107194 ID=Msa0934310-mRNA-1:exon:1270;Parent=Msa0934310-mRNA-1
chr6_3 exon 4107910 4107990 4107910 ID=Msa0934310-mRNA-1:exon:1271;Parent=Msa0934310-mRNA-1
chr6_3 exon 4108138 4108175 4108138 ID=Msa0934310-mRNA-1:exon:1272;Parent=Msa0934310-mRNA-1
chr6_3 exon 4112844 4112866 4112844 ID=Msa0934310-mRNA-1:exon:1273;Parent=Msa0934310-mRNA-1
chr6_3 exon 4113450 4113535 4113450 ID=Msa0934310-mRNA-1:exon:1274;Parent=Msa0934310-mRNA-1
chr6_3 exon 4113780 4113929 4113780 ID=Msa0934310-mRNA-1:exon:1275;Parent=Msa0934310-mRNA-1
chr6_3 exon 4114483 4114860 4114483 ID=Msa0934310-mRNA-1:exon:1276;Parent=Msa0934310-mRNA-1
chr6_3 five_prime_UTR 4103719 4103858 4103719 ID=Msa0934310-mRNA-1:five_prime_utr;Parent=Msa0934310-mRNA-1
chr6_3 five_prime_UTR 4103938 4104116 4103938 ID=Msa0934310-mRNA-1:five_prime_utr;Parent=Msa0934310-mRNA-1
chr6_3 five_prime_UTR 4104844 4104977 4104844 ID=Msa0934310-mRNA-1:five_prime_utr;Parent=Msa0934310-mRNA-1
chr6_3 five_prime_UTR 4105782 4105858 4105782 ID=Msa0934310-mRNA-1:five_prime_utr;Parent=Msa0934310-mRNA-1
chr6_3 five_prime_UTR 4106487 4106488 4106487 ID=Msa0934310-mRNA-1:five_prime_utr;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4106489 4106720 4106489 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4107194 4107801 4107194 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4107910 4107990 4107910 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4108138 4108175 4108138 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4112844 4112866 4112844 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4113450 4113535 4113450 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4113780 4113929 4113780 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 CDS 4114483 4114569 4114483 ID=Msa0934310-mRNA-1:cds;Parent=Msa0934310-mRNA-1
chr6_3 three_prime_UTR 4114570 4114860 4114570 ID=Msa0934310-mRNA-1:three_prime_utr;Parent=Msa0934310-mRNA-1
Gene Sequence

>Msa0934310

ATGAATCGATTAATAACCGGATTTGCTCGGGTCTTGGGTGGATTTTCTCTTATTCATTCTTCTTCCAAGAATTATGATTCAAGCCGCAAATTTTTGTTTAAATCAGACGAAGAAGAGAGAGAATTTTATCGTGGTCGCATTGTTCAGGGGGACGTCTCTGACTTGCCAGACGAGGTCGACTGGCACCATGCTCGCTCCGTTACATATCCTAGGGTTGCCCAAGGCGAATGTGGATGTTGCTATGCCCTGGCTTCCATATATGCTGTCGAAAGCCTTATCCACATCAAGACCGGAGTTCTTGAAGAATTAAGCGCTCAGGAAATCGTGTCTTGTGACAGAGGTAACGGTAACAAGGGATGTAACGGAGGTTTTCCTCAAAAGGTATTTGAATACATAAAGAGGAACGGGATTTCTCTTGAAAAAGATTTCCCTTACAAGGGTAAAGAGACAAGATGTCGTCTCTCTAAAAGAGGGAAGAGAGTTAAAATCACTGGTCATGTAAAAGTTCCTGGTCATGGAAACGGTGACGAGAGTCATTTGCTTCGGGCTGTTGCAAAACAGCCCGTTACCGCAATGATATACGTTAATCCCAAAGAATTTTATAAATATAAGGATGGGATTTGGAGGAAGGAATATCGAACTCGAACAATTGTTGATGGTGCATTGCATAATGTTTGCATTGTTGGATACCATACTATTGACACAATTAAGTTTTGGAAAATTAAGAATACATATGGGAACAAATGGGGGATGGGAGGTTTTATGTGGATTGAAAGAGATTGCGGATTACCATATGGCCGTTGCGAAATCCTTCTCGATGCTCATTATCCTGTGCTAGAGGGCACTGAAGAGGAAATTAACGAACTAGTAGGTAACACAAAACCAGAGCAGCCTAAGAGCTTTTTGAATAGATTTATACCGCTGATTTCGAGGTTTGTGGACACTGAACAGTTTCAGTGGTTTAATGATTTGAAAGAAATCGGCGCTTTCCTATTCTCCAAGAGGGAAGAGGGCAAAGATGATACTACTAGATGCAGTCAACCAATCAATTCTGTACCATCTCATCTGGTGGGACCAAAAGGTGAAGTTGCTACTGAGCAACCTGGCAAGAGTCCCATGGCATCTGCTGTTGCCACTCCACAATTGTCTGATGATGATATTGGCATATCACCATCATATGCAGAGACAGCAATCAATAAGAATAGAAAGATGGCAGACGGGGTACCTGGAGGTGGTCAGGATGCATCAGTTACAATTACTGATCATCGTGCTGGCAAATTTGAAGTCAACAGGGAAGATTGCTAG
Protein sequence

>Msa0934310

MNRLITGFARVLGGFSLIHSSSKNYDSSRKFLFKSDEEEREFYRGRIVQGDVSDLPDEVDWHHARSVTYPRVAQGECGCCYALASIYAVESLIHIKTGVLEELSAQEIVSCDRGNGNKGCNGGFPQKVFEYIKRNGISLEKDFPYKGKETRCRLSKRGKRVKITGHVKVPGHGNGDESHLLRAVAKQPVTAMIYVNPKEFYKYKDGIWRKEYRTRTIVDGALHNVCIVGYHTIDTIKFWKIKNTYGNKWGMGGFMWIERDCGLPYGRCEILLDAHYPVLEGTEEEINELVGNTKPEQPKSFLNRFIPLISRFVDTEQFQWFNDLKEIGAFLFSKREEGKDDTTRCSQPINSVPSHLVGPKGEVATEQPGKSPMASAVATPQLSDDDIGISPSYAETAINKNRKMADGVPGGGQDASVTITDHRAGKFEVNREDC*