Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0935010 | Msa0935020 | 0.824935 | 6.164813e-54 | -8.615850e-47 |
| Msa0935020 | Msa0935040 | 0.823981 | 1.033353e-53 | -8.615850e-47 |
| Msa0935020 | Msa0935050 | 0.865714 | 4.833015e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 552 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAACCTTATCCTAGTTAT+TGG | 0.164931 | 6_3:+5333989 | Msa0935020:three_prime_UTR |
| AGTACTCTTGTTGTGTATTC+AGG | 0.221148 | 6_3:+5334054 | Msa0935020:three_prime_UTR |
| AAGTTTAATGCTTGCTCTTT+TGG | 0.224634 | 6_3:+5333704 | Msa0935020:CDS |
| GTTAAGCCCCTTCTATTATT+AGG | 0.239524 | 6_3:+5333866 | Msa0935020:CDS |
| GGGGCTTAACCAAGCAAATA+AGG | 0.260782 | 6_3:-5333853 | None:intergenic |
| CAGGTCACTATGTCTCTTTC+CGG | 0.315834 | 6_3:+5331708 | Msa0935020:intron |
| TCATCCCTTCATTTATTTCC+AGG | 0.333905 | 6_3:-5333767 | None:intergenic |
| TCGACACAAAATAAAGCAAT+AGG | 0.336301 | 6_3:-5333925 | None:intergenic |
| CTAGTTATTGGTATCTTTGT+TGG | 0.341847 | 6_3:+5334001 | Msa0935020:three_prime_UTR |
| CAATAGGGAGAAAAGCTTAA+AGG | 0.344849 | 6_3:-5333909 | None:intergenic |
| GTTGGTGACCTAATAATAGA+AGG | 0.392561 | 6_3:-5333874 | None:intergenic |
| AGTATGTCCCCTTATTTGCT+TGG | 0.415078 | 6_3:+5333844 | Msa0935020:CDS |
| GAAGATCCGCCGAGCAAGAC+CGG | 0.434552 | 6_3:-5331727 | None:intergenic |
| CGACTGCGAGAGGTGGTGCC+TGG | 0.441779 | 6_3:+5333749 | Msa0935020:CDS |
| GGGCTTAACCAAGCAAATAA+GGG | 0.452029 | 6_3:-5333852 | None:intergenic |
| GTGAGTTCAAAGATTTGAAA+AGG | 0.453532 | 6_3:+5333811 | Msa0935020:CDS |
| TCCAACAAGCTTGGAGGAGG+GGG | 0.460431 | 6_3:+5331792 | Msa0935020:CDS |
| ATGAAATACCTGTGATTGTT+GGG | 0.477825 | 6_3:-5331823 | None:intergenic |
| CGACACAAAATAAAGCAATA+GGG | 0.497214 | 6_3:-5333924 | None:intergenic |
| AGGAGGGGCCCAACAATCAC+AGG | 0.499979 | 6_3:+5331815 | Msa0935020:CDS |
| TATTAGGTCACCAACACAAA+AGG | 0.501634 | 6_3:+5333882 | Msa0935020:exon |
| CAACAAAGATACCAATAACT+AGG | 0.510035 | 6_3:-5334000 | None:intergenic |
| CAATCCAACAAGCTTGGAGG+AGG | 0.510329 | 6_3:+5331789 | Msa0935020:CDS |
| GAGATCAGTTTCCACCATTG+AGG | 0.515536 | 6_3:+5325969 | Msa0935020:CDS |
| TTGCATCAATCCAACAAGCT+TGG | 0.523889 | 6_3:+5331783 | Msa0935020:CDS |
| AGATACCAATAACTAGGATA+AGG | 0.525253 | 6_3:-5333994 | None:intergenic |
| AATGAAATACCTGTGATTGT+TGG | 0.532174 | 6_3:-5331824 | None:intergenic |
| TGTCTCTTTCCGGTCTTGCT+CGG | 0.537525 | 6_3:+5331718 | Msa0935020:CDS |
| ATCCAACAAGCTTGGAGGAG+GGG | 0.542492 | 6_3:+5331791 | Msa0935020:CDS |
| CATCAATCCAACAAGCTTGG+AGG | 0.550773 | 6_3:+5331786 | Msa0935020:CDS |
| AGCTTGTTGGATTGATGCAA+TGG | 0.556706 | 6_3:-5331780 | None:intergenic |
| TGGTGCCTGGAAATAAATGA+AGG | 0.556836 | 6_3:+5333762 | Msa0935020:CDS |
| CTCTTTCCGGTCTTGCTCGG+CGG | 0.579534 | 6_3:+5331721 | Msa0935020:CDS |
| TTGGTGACCTAATAATAGAA+GGG | 0.581361 | 6_3:-5333873 | None:intergenic |
| ACATCGAATTCGACTGCGAG+AGG | 0.581778 | 6_3:+5333739 | Msa0935020:CDS |
| ACATCTAAGAATTACCTCAA+TGG | 0.584702 | 6_3:-5325983 | None:intergenic |
| TCGAATTCGACTGCGAGAGG+TGG | 0.593058 | 6_3:+5333742 | Msa0935020:CDS |
| AATCCAACAAGCTTGGAGGA+GGG | 0.600201 | 6_3:+5331790 | Msa0935020:CDS |
| TCTAAGAATTACCTCAATGG+TGG | 0.603563 | 6_3:-5325980 | None:intergenic |
| ATGCAATGGAGTTGCTCTGT+AGG | 0.608336 | 6_3:-5331766 | None:intergenic |
| GGCTTAACCAAGCAAATAAG+GGG | 0.608952 | 6_3:-5333851 | None:intergenic |
| ATTAAACTTGACGCGCACAA+AGG | 0.618175 | 6_3:-5333690 | None:intergenic |
| TGGTGACCTAATAATAGAAG+GGG | 0.648931 | 6_3:-5333872 | None:intergenic |
| GGTGCCTGGAAATAAATGAA+GGG | 0.720434 | 6_3:+5333763 | Msa0935020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTTTTTTTTTTTTTGT+AGG | + | chr6_3:5325508-5325527 | Msa0935020:intron | 10.0% |
| !! | AAAAAAAAAAATCCTTAAAT+GGG | - | chr6_3:5331329-5331348 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAATCCTTAAA+TGG | - | chr6_3:5331328-5331347 | None:intergenic | 10.0% |
| !!! | AATTTTTGAAGTAAAATAAA+AGG | + | chr6_3:5326974-5326993 | Msa0935020:intron | 10.0% |
| !! | AATTTACTTAATTTATTAAC+GGG | + | chr6_3:5327319-5327338 | Msa0935020:intron | 10.0% |
| !!! | TTATTATTTTTCTTTATTCA+TGG | + | chr6_3:5328490-5328509 | Msa0935020:intron | 10.0% |
| !! | TAAAAAAAAAAATCCTTAAA+TGG | + | chr6_3:5331328-5331347 | Msa0935020:intron | 10.0% |
| !! | AAAAAAAAAAATCCTTAAAT+GGG | + | chr6_3:5331329-5331348 | Msa0935020:intron | 10.0% |
| !!! | TTAATTGATAATAAAGTATT+AGG | + | chr6_3:5331587-5331606 | Msa0935020:intron | 10.0% |
| !!! | TAATTGATAATAAAGTATTA+GGG | + | chr6_3:5331588-5331607 | Msa0935020:intron | 10.0% |
| !! | ATAAATTAATATATATGTAG+CGG | - | chr6_3:5332023-5332042 | None:intergenic | 10.0% |
| !! | ATATTAATTTATTTATAGAC+TGG | + | chr6_3:5332031-5332050 | Msa0935020:intron | 10.0% |
| !! | AAATAATGTTATGTTATACT+AGG | + | chr6_3:5325531-5325550 | Msa0935020:intron | 15.0% |
| !!! | TTTATTTTCTCTTTTGTTTT+AGG | + | chr6_3:5325941-5325960 | Msa0935020:intron | 15.0% |
| !! | TAAATGCAATAAGTTAATAT+TGG | + | chr6_3:5326293-5326312 | Msa0935020:intron | 15.0% |
| !! | AATATTAAACTATTCTGAAT+TGG | - | chr6_3:5326366-5326385 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTAGCTTTTATT+TGG | - | chr6_3:5327036-5327055 | None:intergenic | 15.0% |
| !! | TATCTATGTGTATATATAAA+AGG | - | chr6_3:5327292-5327311 | None:intergenic | 15.0% |
| !!! | ATATGTTGATAATTGATATA+AGG | + | chr6_3:5328073-5328092 | Msa0935020:intron | 15.0% |
| !!! | TTATTATTTTCATCATTATC+AGG | - | chr6_3:5328470-5328489 | None:intergenic | 15.0% |
| !!! | TATAAATAGTAGTTTTCTAT+AGG | - | chr6_3:5329285-5329304 | None:intergenic | 15.0% |
| !!! | TAAGAATTATTTGTTTTCTA+TGG | - | chr6_3:5329349-5329368 | None:intergenic | 15.0% |
| !!! | TTCTTTCAATATTTTAATTG+AGG | + | chr6_3:5329780-5329799 | Msa0935020:intron | 15.0% |
| !! | AGGATAAAAATTAATTGTTA+AGG | + | chr6_3:5330559-5330578 | Msa0935020:intron | 15.0% |
| !! | AAAAATTAATTGTTAAGGAT+TGG | + | chr6_3:5330564-5330583 | Msa0935020:intron | 15.0% |
| !! | TATCAATTAAATCAAATCAA+AGG | - | chr6_3:5331577-5331596 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACAATTTTATGT+AGG | + | chr6_3:5332380-5332399 | Msa0935020:intron | 15.0% |
| !! | TGTGAAATTATCAAATTTGA+AGG | + | chr6_3:5326083-5326102 | Msa0935020:intron | 20.0% |
| !!! | AGTTTTTAGAAAATGACTTA+CGG | - | chr6_3:5326142-5326161 | None:intergenic | 20.0% |
| !!! | GTCATTTGAGTTAAAATATT+TGG | + | chr6_3:5326243-5326262 | Msa0935020:intron | 20.0% |
| !! | TGTATTTCCTTCAATTTAAT+AGG | + | chr6_3:5326433-5326452 | Msa0935020:intron | 20.0% |
| !! | AAATTAATTCCAAAATCCAT+GGG | - | chr6_3:5326767-5326786 | None:intergenic | 20.0% |
| !! | AAAATTAATTCCAAAATCCA+TGG | - | chr6_3:5326768-5326787 | None:intergenic | 20.0% |
| !! | TGAATAGAATATGTTATGTA+TGG | - | chr6_3:5326848-5326867 | None:intergenic | 20.0% |
| !!! | TGAATTTTTGGATGTTTATT+TGG | - | chr6_3:5327064-5327083 | None:intergenic | 20.0% |
| !! | AAACTGTATATAAAATAGCT+TGG | - | chr6_3:5327095-5327114 | None:intergenic | 20.0% |
| !!! | TTTAAATACCTGTTACTTTA+TGG | - | chr6_3:5327390-5327409 | None:intergenic | 20.0% |
| !! | TGTTATCATATAATTTGATG+AGG | - | chr6_3:5327844-5327863 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTGAATTGACTT+TGG | + | chr6_3:5327866-5327885 | Msa0935020:intron | 20.0% |
| !! | TAGATCAAAGTTTAATTACT+TGG | - | chr6_3:5328351-5328370 | None:intergenic | 20.0% |
| !! | CAAACATAACCTAAAATTAT+GGG | - | chr6_3:5328525-5328544 | None:intergenic | 20.0% |
| !! | ACAAACATAACCTAAAATTA+TGG | - | chr6_3:5328526-5328545 | None:intergenic | 20.0% |
| !!! | TAGTTTTCTATAGGAAAAAA+GGG | - | chr6_3:5329276-5329295 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTCTATGGTTAT+AGG | - | chr6_3:5329342-5329361 | None:intergenic | 20.0% |
| !!! | AATGATAGCCTTAAAAATAT+AGG | + | chr6_3:5329575-5329594 | Msa0935020:intron | 20.0% |
| !! | ATTTCTCCAAAATATCAATA+TGG | - | chr6_3:5329858-5329877 | None:intergenic | 20.0% |
| !!! | TGATATTTTGGAGAAATTAA+AGG | + | chr6_3:5329861-5329880 | Msa0935020:intron | 20.0% |
| !! | GTAACAATACTATATTAAAG+TGG | + | chr6_3:5329935-5329954 | Msa0935020:intron | 20.0% |
| !! | ATTTATCCTTCTTGTATTTA+GGG | - | chr6_3:5330292-5330311 | None:intergenic | 20.0% |
| !! | CAAGTTATTTATTCACAATT+CGG | - | chr6_3:5330426-5330445 | None:intergenic | 20.0% |
| !! | AAAAAAAAACTCTAATGAGT+TGG | + | chr6_3:5331186-5331205 | Msa0935020:intron | 20.0% |
| !!! | TCCTATATTTTTTACACTAA+CGG | - | chr6_3:5331992-5332011 | None:intergenic | 20.0% |
| !! | TATAAGTGTTATATATGTGT+CGG | + | chr6_3:5332331-5332350 | Msa0935020:intron | 20.0% |
| !!! | ATTATTGTTATTTCTGACAC+AGG | - | chr6_3:5331437-5331456 | None:intergenic | 25.0% |
| ! | AATGTTATGTTATACTAGGT+CGG | + | chr6_3:5325535-5325554 | Msa0935020:intron | 25.0% |
| ! | AGAAACAATACTTAAATGCA+AGG | - | chr6_3:5331213-5331232 | None:intergenic | 25.0% |
| ! | TCCTTCAATTTAATAGGATT+TGG | + | chr6_3:5326439-5326458 | Msa0935020:intron | 25.0% |
| ! | AAATCTGAAGGAAGTAAATT+AGG | - | chr6_3:5326547-5326566 | None:intergenic | 25.0% |
| ! | TAATTTACTTCCTTCAGATT+TGG | + | chr6_3:5326546-5326565 | Msa0935020:intron | 25.0% |
| !!! | TTTTTATGGTTTTTGGATGT+TGG | - | chr6_3:5327010-5327029 | None:intergenic | 25.0% |
| !!! | CTTTTATTTGGAGGTTTTTA+TGG | - | chr6_3:5327024-5327043 | None:intergenic | 25.0% |
| !!! | TTTTTCTAGCTTTTATTTGG+AGG | - | chr6_3:5327033-5327052 | None:intergenic | 25.0% |
| !! | TTGGAATGCATATGAATTTT+TGG | - | chr6_3:5327076-5327095 | None:intergenic | 25.0% |
| ! | AATTTATAACCACTTTGGTA+AGG | - | chr6_3:5327582-5327601 | None:intergenic | 25.0% |
| ! | CAATGAATTTATAACCACTT+TGG | - | chr6_3:5327587-5327606 | None:intergenic | 25.0% |
| ! | CCTAAAAATCAAAGTTTGAT+CGG | - | chr6_3:5327613-5327632 | None:intergenic | 25.0% |
| !! | ATTTTCAATGCAAATCATGA+TGG | - | chr6_3:5327695-5327714 | None:intergenic | 25.0% |
| !! | GATTTTCAATATTTGCTTTG+TGG | + | chr6_3:5327744-5327763 | Msa0935020:intron | 25.0% |
| !! | TTTCTAAAAATTGCAGATGT+AGG | + | chr6_3:5327953-5327972 | Msa0935020:intron | 25.0% |
| ! | AAAATGGCATAATTACATCT+TGG | + | chr6_3:5327979-5327998 | Msa0935020:intron | 25.0% |
| ! | TGATAATTGATATAAGGTGT+TGG | + | chr6_3:5328079-5328098 | Msa0935020:intron | 25.0% |
| !! | GATAATTGATATAAGGTGTT+GGG | + | chr6_3:5328080-5328099 | Msa0935020:intron | 25.0% |
| ! | CCTATTTGAATACAAACTTT+GGG | - | chr6_3:5328108-5328127 | None:intergenic | 25.0% |
| ! | CCAAAGTTTGTATTCAAATA+GGG | + | chr6_3:5328106-5328125 | Msa0935020:intron | 25.0% |
| ! | TTAGTATATAACAGAAATGC+AGG | - | chr6_3:5328201-5328220 | None:intergenic | 25.0% |
| ! | TGAATTGAAAAAATAGAGTG+TGG | + | chr6_3:5328379-5328398 | Msa0935020:intron | 25.0% |
| ! | GAATTGAAAAAATAGAGTGT+GGG | + | chr6_3:5328380-5328399 | Msa0935020:intron | 25.0% |
| ! | CATTAGTAGTGTTTAAATAG+TGG | + | chr6_3:5328428-5328447 | Msa0935020:intron | 25.0% |
| !! | ATATCACTTCCCATAATTTT+AGG | + | chr6_3:5328513-5328532 | Msa0935020:intron | 25.0% |
| ! | TAGTTGAAACAAACTAATGA+AGG | - | chr6_3:5328588-5328607 | None:intergenic | 25.0% |
| !!! | ATTTGTGCTTTTGTTATTTC+TGG | + | chr6_3:5328980-5328999 | Msa0935020:intron | 25.0% |
| !!! | TTTGTGCTTTTGTTATTTCT+GGG | + | chr6_3:5328981-5329000 | Msa0935020:intron | 25.0% |
| !! | GTAGTTTTCTATAGGAAAAA+AGG | - | chr6_3:5329277-5329296 | None:intergenic | 25.0% |
| ! | ATAGGTTTGAATTCGAATAT+AGG | - | chr6_3:5329324-5329343 | None:intergenic | 25.0% |
| ! | CATTCGAAATTCAAATTAGA+TGG | - | chr6_3:5329373-5329392 | None:intergenic | 25.0% |
| !! | TTTAAGGCTATCATTTAATG+TGG | - | chr6_3:5329570-5329589 | None:intergenic | 25.0% |
| !!! | CTTGTTAGCCTATATTTTTA+AGG | - | chr6_3:5329586-5329605 | None:intergenic | 25.0% |
| ! | ATAGTACTCTTTATTCCAAA+GGG | - | chr6_3:5329688-5329707 | None:intergenic | 25.0% |
| ! | AATAGTACTCTTTATTCCAA+AGG | - | chr6_3:5329689-5329708 | None:intergenic | 25.0% |
| ! | GGACATTATTATTCCAAAAA+CGG | - | chr6_3:5329723-5329742 | None:intergenic | 25.0% |
| ! | GGAATTAAGAATGATCTTAA+CGG | + | chr6_3:5329747-5329766 | Msa0935020:intron | 25.0% |
| ! | ATTGAGGAGAAATTAAAAAG+TGG | + | chr6_3:5329796-5329815 | Msa0935020:intron | 25.0% |
| ! | GAGAAATTAAAAAGTGGAAA+TGG | + | chr6_3:5329802-5329821 | Msa0935020:intron | 25.0% |
| ! | AAATTAAAAAGTGGAAATGG+TGG | + | chr6_3:5329805-5329824 | Msa0935020:intron | 25.0% |
| ! | GAAATCCAAATACAATAGTT+TGG | + | chr6_3:5330188-5330207 | Msa0935020:intron | 25.0% |
| ! | GATTTCCAAACTATTGTATT+TGG | - | chr6_3:5330196-5330215 | None:intergenic | 25.0% |
| !!! | GTCTTAAAATTGTTGGTTTT+TGG | - | chr6_3:5330218-5330237 | None:intergenic | 25.0% |
| ! | GATTTATCCTTCTTGTATTT+AGG | - | chr6_3:5330293-5330312 | None:intergenic | 25.0% |
| !! | TGCACTAAAAAATTTTCTTC+TGG | + | chr6_3:5330708-5330727 | Msa0935020:intron | 25.0% |
| !!! | TTTTTGTTACTTTGGTTCTA+TGG | - | chr6_3:5331140-5331159 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTTGTTCGTTTC+TGG | - | chr6_3:5331174-5331193 | None:intergenic | 25.0% |
| ! | AGAAACAATACTTAAATGCA+AGG | + | chr6_3:5331213-5331232 | Msa0935020:intron | 25.0% |
| ! | AATGTTATGTTATACTAGCT+CGG | - | chr6_3:5331391-5331410 | None:intergenic | 25.0% |
| !!! | ATTATTGTTATTTCTGACAC+AGG | + | chr6_3:5331437-5331456 | Msa0935020:intron | 25.0% |
| ! | CTGATTGAATTGAATTGAAT+TGG | + | chr6_3:5331617-5331636 | Msa0935020:intron | 25.0% |
| ! | GATAGTTTGAACATACTTAT+TGG | + | chr6_3:5331668-5331687 | Msa0935020:intron | 25.0% |
| ! | CTTACATAATTGGAATAACT+GGG | - | chr6_3:5331883-5331902 | None:intergenic | 25.0% |
| ! | TCTTACATAATTGGAATAAC+TGG | - | chr6_3:5331884-5331903 | None:intergenic | 25.0% |
| ! | AGTTATTCCAATTATGTAAG+AGG | + | chr6_3:5331883-5331902 | Msa0935020:intron | 25.0% |
| ! | TATCTATCCTCTTACATAAT+TGG | - | chr6_3:5331893-5331912 | None:intergenic | 25.0% |
| ! | TAAGAGGATAGATAGATTAA+TGG | + | chr6_3:5331899-5331918 | Msa0935020:intron | 25.0% |
| ! | ACCGTTAGTGTAAAAAATAT+AGG | + | chr6_3:5331988-5332007 | Msa0935020:intron | 25.0% |
| ! | AGTGTAAAAAATATAGGACA+CGG | + | chr6_3:5331994-5332013 | Msa0935020:intron | 25.0% |
| ! | TTGAGAAATGTTGATCAATT+GGG | - | chr6_3:5332222-5332241 | None:intergenic | 25.0% |
| ! | TTTGAGAAATGTTGATCAAT+TGG | - | chr6_3:5332223-5332242 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+AGG | + | chr6_3:5332245-5332264 | Msa0935020:intron | 25.0% |
| ! | ATACGTTATTAATTAACTCC+AGG | + | chr6_3:5332791-5332810 | Msa0935020:intron | 25.0% |
| ! | TACGTTATTAATTAACTCCA+GGG | + | chr6_3:5332792-5332811 | Msa0935020:intron | 25.0% |
| ! | AATAAAAAGAAGTAAATCCC+TGG | - | chr6_3:5332812-5332831 | None:intergenic | 25.0% |
| !! | GAAACAAAAAAGTACAAGTT+GGG | - | chr6_3:5332855-5332874 | None:intergenic | 25.0% |
| !! | AGAAACAAAAAAGTACAAGT+TGG | - | chr6_3:5332856-5332875 | None:intergenic | 25.0% |
| ! | ATTAACCTTATCCTAGTTAT+TGG | + | chr6_3:5333989-5334008 | Msa0935020:three_prime_UTR | 25.0% |
| AAAACTAAGCATAAACAGAC+AGG | - | chr6_3:5330972-5330991 | None:intergenic | 30.0% | |
| !! | TCTGTTTATGCTTAGTTTTC+CGG | + | chr6_3:5325877-5325896 | Msa0935020:intron | 30.0% |
| AGAAAACAAAACAAAACCAG+CGG | - | chr6_3:5325921-5325940 | None:intergenic | 30.0% | |
| ACATCTAAGAATTACCTCAA+TGG | - | chr6_3:5325986-5326005 | None:intergenic | 30.0% | |
| CTACAATGTCAAATAGCTAT+GGG | + | chr6_3:5326106-5326125 | Msa0935020:intron | 30.0% | |
| GTAGTGATTGAATAACTTCA+AGG | + | chr6_3:5326176-5326195 | Msa0935020:intron | 30.0% | |
| GCCAAATCCTATTAAATTGA+AGG | - | chr6_3:5326443-5326462 | None:intergenic | 30.0% | |
| TTATGGAGATAGTGAAGAAT+AGG | + | chr6_3:5326589-5326608 | Msa0935020:intron | 30.0% | |
| TATGGAGATAGTGAAGAATA+GGG | + | chr6_3:5326590-5326609 | Msa0935020:intron | 30.0% | |
| GGTACCATATTTATCTAACA+GGG | - | chr6_3:5326663-5326682 | None:intergenic | 30.0% | |
| ! | CTTTAAAAGTTGAAGCTTGT+AGG | - | chr6_3:5326823-5326842 | None:intergenic | 30.0% |
| ATTCGTTGGATTATGGTATA+TGG | - | chr6_3:5326882-5326901 | None:intergenic | 30.0% | |
| TCATGATATTCGTTGGATTA+TGG | - | chr6_3:5326889-5326908 | None:intergenic | 30.0% | |
| GTAAGAATCATGATATTCGT+TGG | - | chr6_3:5326896-5326915 | None:intergenic | 30.0% | |
| ! | TTGGAGGTTTTTATGGTTTT+TGG | - | chr6_3:5327017-5327036 | None:intergenic | 30.0% |
| AACGAATGAATAGTAACCTT+TGG | - | chr6_3:5327230-5327249 | None:intergenic | 30.0% | |
| AAGCATCATATTCTTCACTA+GGG | - | chr6_3:5327513-5327532 | None:intergenic | 30.0% | |
| ! | AAAGCATCATATTCTTCACT+AGG | - | chr6_3:5327514-5327533 | None:intergenic | 30.0% |
| AAATTGAATCCTTACCAAAG+TGG | + | chr6_3:5327570-5327589 | Msa0935020:intron | 30.0% | |
| !! | CCGATCAAACTTTGATTTTT+AGG | + | chr6_3:5327610-5327629 | Msa0935020:intron | 30.0% |
| AATCCACATAACATACATCT+TGG | + | chr6_3:5327911-5327930 | Msa0935020:intron | 30.0% | |
| TTGCAGATGTAGGAATAAAA+TGG | + | chr6_3:5327963-5327982 | Msa0935020:intron | 30.0% | |
| ACAAATATAACCGTCACATA+GGG | + | chr6_3:5328049-5328068 | Msa0935020:intron | 30.0% | |
| CCCAAAGTTTGTATTCAAAT+AGG | + | chr6_3:5328105-5328124 | Msa0935020:intron | 30.0% | |
| CCCTATTTGAATACAAACTT+TGG | - | chr6_3:5328109-5328128 | None:intergenic | 30.0% | |
| AGTTTGTATTCAAATAGGGT+AGG | + | chr6_3:5328110-5328129 | Msa0935020:intron | 30.0% | |
| AAGTTAAAGTCAAAGTCTGT+TGG | + | chr6_3:5328276-5328295 | Msa0935020:intron | 30.0% | |
| TTGGAACATTAGTGTGAAAA+TGG | + | chr6_3:5328295-5328314 | Msa0935020:intron | 30.0% | |
| GTGTGAAAATGGAAAGAAAT+TGG | + | chr6_3:5328306-5328325 | Msa0935020:intron | 30.0% | |
| GAAAATGGAAAGAAATTGGA+AGG | + | chr6_3:5328310-5328329 | Msa0935020:intron | 30.0% | |
| ! | GTGTGTGTTCTATTTTATGT+GGG | - | chr6_3:5328409-5328428 | None:intergenic | 30.0% |
| ! | TGTGTGTGTTCTATTTTATG+TGG | - | chr6_3:5328410-5328429 | None:intergenic | 30.0% |
| CAAACTAATGAAGGAAAGAT+AGG | - | chr6_3:5328579-5328598 | None:intergenic | 30.0% | |
| GTTTGTTTCAACTAATCTTG+TGG | + | chr6_3:5328594-5328613 | Msa0935020:intron | 30.0% | |
| AGCTCAAGTAACAAACTAAT+CGG | - | chr6_3:5328642-5328661 | None:intergenic | 30.0% | |
| !!! | AGGTGAGCTCTTTTTTTATA+GGG | - | chr6_3:5328738-5328757 | None:intergenic | 30.0% |
| !!! | TAGGTGAGCTCTTTTTTTAT+AGG | - | chr6_3:5328739-5328758 | None:intergenic | 30.0% |
| !! | TTTGGTGTGATTTTTGAACT+AGG | - | chr6_3:5328758-5328777 | None:intergenic | 30.0% |
| ! | AAAGAGTTTCATTGAGTTGT+CGG | + | chr6_3:5328775-5328794 | Msa0935020:intron | 30.0% |
| AAGATCAACCAGTAAATCTT+AGG | + | chr6_3:5328952-5328971 | Msa0935020:intron | 30.0% | |
| AATATGCTCCTAAGATTTAC+TGG | - | chr6_3:5328963-5328982 | None:intergenic | 30.0% | |
| !!! | AGTTTTGATTGAAGTCAACT+GGG | - | chr6_3:5329066-5329085 | None:intergenic | 30.0% |
| !!! | AAGTTTTGATTGAAGTCAAC+TGG | - | chr6_3:5329067-5329086 | None:intergenic | 30.0% |
| ! | TGCATTGATCGAAAGTAAAT+TGG | + | chr6_3:5329162-5329181 | Msa0935020:intron | 30.0% |
| TTACACTCAAATTATCCGTA+TGG | - | chr6_3:5329231-5329250 | None:intergenic | 30.0% | |
| ! | AGGACAGTTATTTCAGATAA+GGG | - | chr6_3:5329423-5329442 | None:intergenic | 30.0% |
| ! | AAGGACAGTTATTTCAGATA+AGG | - | chr6_3:5329424-5329443 | None:intergenic | 30.0% |
| GAAACGAAATATTGTTTCCA+AGG | - | chr6_3:5329507-5329526 | None:intergenic | 30.0% | |
| ATTTCGTTTCTTCGATGATA+AGG | + | chr6_3:5329517-5329536 | Msa0935020:intron | 30.0% | |
| AAGGGACTTATAATATCGAA+GGG | - | chr6_3:5329670-5329689 | None:intergenic | 30.0% | |
| AAAGGGACTTATAATATCGA+AGG | - | chr6_3:5329671-5329690 | None:intergenic | 30.0% | |
| TTCGATATTATAAGTCCCTT+TGG | + | chr6_3:5329670-5329689 | Msa0935020:intron | 30.0% | |
| ! | TTAAGATCATAGTCCGTTTT+TGG | + | chr6_3:5329707-5329726 | Msa0935020:intron | 30.0% |
| AAGATCATTCTTAATTCCGA+CGG | - | chr6_3:5329745-5329764 | None:intergenic | 30.0% | |
| ! | GTAGTGCCATATTGATATTT+TGG | + | chr6_3:5329849-5329868 | Msa0935020:intron | 30.0% |
| TGGAGAAATTAAAGGTAGAA+TGG | + | chr6_3:5329869-5329888 | Msa0935020:intron | 30.0% | |
| AGAAATTAAAGGTAGAATGG+TGG | + | chr6_3:5329872-5329891 | Msa0935020:intron | 30.0% | |
| TGATCTCAATACCATATTTG+AGG | + | chr6_3:5329974-5329993 | Msa0935020:intron | 30.0% | |
| GATCTCAATACCATATTTGA+GGG | + | chr6_3:5329975-5329994 | Msa0935020:intron | 30.0% | |
| TCGAAACGTCTTAAAATTGT+TGG | - | chr6_3:5330225-5330244 | None:intergenic | 30.0% | |
| ACCTCAATAAGTAACTTCTT+CGG | - | chr6_3:5330261-5330280 | None:intergenic | 30.0% | |
| AATTGTCCCTAAATACAAGA+AGG | + | chr6_3:5330283-5330302 | Msa0935020:intron | 30.0% | |
| CAAATGAAAAAACGATGCTA+AGG | + | chr6_3:5330609-5330628 | Msa0935020:intron | 30.0% | |
| !! | ATATGCTAGAGCATCAATTT+TGG | + | chr6_3:5330775-5330794 | Msa0935020:intron | 30.0% |
| !! | GATTTTGATCCTGAAAGAAT+AGG | + | chr6_3:5330834-5330853 | Msa0935020:intron | 30.0% |
| AACAATAATGCATGATGTAC+AGG | - | chr6_3:5330868-5330887 | None:intergenic | 30.0% | |
| TGTACATCATGCATTATTGT+TGG | + | chr6_3:5330867-5330886 | Msa0935020:intron | 30.0% | |
| GTACATCATGCATTATTGTT+GGG | + | chr6_3:5330868-5330887 | Msa0935020:intron | 30.0% | |
| ! | CTTCTTCAAACGATTGATTT+GGG | - | chr6_3:5331486-5331505 | None:intergenic | 30.0% |
| TTGAATTGAATTGGAAGTTG+TGG | + | chr6_3:5331626-5331645 | Msa0935020:intron | 30.0% | |
| ATGAAATACCTGTGATTGTT+GGG | - | chr6_3:5331826-5331845 | None:intergenic | 30.0% | |
| AATGAAATACCTGTGATTGT+TGG | - | chr6_3:5331827-5331846 | None:intergenic | 30.0% | |
| !!! | CTGACTTTTGTTTTTCTTAG+AGG | + | chr6_3:5332707-5332726 | Msa0935020:intron | 30.0% |
| TAATGTTATGACCCAAATTG+TGG | + | chr6_3:5333117-5333136 | Msa0935020:intron | 30.0% | |
| AGAAAGAAAACACGTACATT+GGG | - | chr6_3:5333320-5333339 | None:intergenic | 30.0% | |
| AAGAAAGAAAACACGTACAT+TGG | - | chr6_3:5333321-5333340 | None:intergenic | 30.0% | |
| ! | TGTACGTGTTTTCTTTCTTT+AGG | + | chr6_3:5333322-5333341 | Msa0935020:intron | 30.0% |
| ! | GTACGTGTTTTCTTTCTTTA+GGG | + | chr6_3:5333323-5333342 | Msa0935020:intron | 30.0% |
| !! | TTTCTTTAGGGTTTGTGTTT+AGG | + | chr6_3:5333335-5333354 | Msa0935020:intron | 30.0% |
| CTGCTCATAAACAGAATAAA+AGG | - | chr6_3:5333387-5333406 | None:intergenic | 30.0% | |
| TTTATTCTGTTTATGAGCAG+TGG | + | chr6_3:5333387-5333406 | Msa0935020:intron | 30.0% | |
| TAAAATCCACAATGCTATAG+CGG | - | chr6_3:5333429-5333448 | None:intergenic | 30.0% | |
| ! | AAGTTTAATGCTTGCTCTTT+TGG | + | chr6_3:5333704-5333723 | Msa0935020:CDS | 30.0% |
| GTGAGTTCAAAGATTTGAAA+AGG | + | chr6_3:5333811-5333830 | Msa0935020:CDS | 30.0% | |
| ! | TTGGTGACCTAATAATAGAA+GGG | - | chr6_3:5333876-5333895 | None:intergenic | 30.0% |
| ! | TAAAGGATTTCCTTTTGTGT+TGG | - | chr6_3:5333895-5333914 | None:intergenic | 30.0% |
| CGACACAAAATAAAGCAATA+GGG | - | chr6_3:5333927-5333946 | None:intergenic | 30.0% | |
| TCGACACAAAATAAAGCAAT+AGG | - | chr6_3:5333928-5333947 | None:intergenic | 30.0% | |
| AGATACCAATAACTAGGATA+AGG | - | chr6_3:5333997-5334016 | None:intergenic | 30.0% | |
| CAACAAAGATACCAATAACT+AGG | - | chr6_3:5334003-5334022 | None:intergenic | 30.0% | |
| CTAGTTATTGGTATCTTTGT+TGG | + | chr6_3:5334001-5334020 | Msa0935020:three_prime_UTR | 30.0% | |
| CTTGAGAAACTGTAATGAGT+TGG | - | chr6_3:5325740-5325759 | None:intergenic | 35.0% | |
| TACAGTTTCTCAAGCTCAAA+TGG | + | chr6_3:5325746-5325765 | Msa0935020:intron | 35.0% | |
| TCTAAGAATTACCTCAATGG+TGG | - | chr6_3:5325983-5326002 | None:intergenic | 35.0% | |
| GCTACAATGTCAAATAGCTA+TGG | + | chr6_3:5326105-5326124 | Msa0935020:intron | 35.0% | |
| TGCTTATGATCACACAAATG+CGG | - | chr6_3:5326320-5326339 | None:intergenic | 35.0% | |
| ! | TTCCTTCAGATTTGGTTGTT+GGG | + | chr6_3:5326554-5326573 | Msa0935020:intron | 35.0% |
| TTGGGTTAATCTACAGCTTA+TGG | + | chr6_3:5326572-5326591 | Msa0935020:intron | 35.0% | |
| TGAAGAATAGGGATGTCAAT+GGG | + | chr6_3:5326601-5326620 | Msa0935020:intron | 35.0% | |
| TCAATGGGTATCCATATGTA+CGG | + | chr6_3:5326616-5326635 | Msa0935020:intron | 35.0% | |
| TATCATACTACCCGTACATA+TGG | - | chr6_3:5326630-5326649 | None:intergenic | 35.0% | |
| ACCATATTTATCTAACAGGG+CGG | - | chr6_3:5326660-5326679 | None:intergenic | 35.0% | |
| GGGTACCATATTTATCTAAC+AGG | - | chr6_3:5326664-5326683 | None:intergenic | 35.0% | |
| !! | AAAAAGCTTTTTAGTGCGAC+AGG | - | chr6_3:5327269-5327288 | None:intergenic | 35.0% |
| !! | TACCTGTTACTTTATGGACA+TGG | - | chr6_3:5327384-5327403 | None:intergenic | 35.0% |
| AGCATCATATTCTTCACTAG+GGG | - | chr6_3:5327512-5327531 | None:intergenic | 35.0% | |
| CAACAGATGCAAACAATACA+TGG | - | chr6_3:5327725-5327744 | None:intergenic | 35.0% | |
| ACTCCAAGATGTATGTTATG+TGG | - | chr6_3:5327917-5327936 | None:intergenic | 35.0% | |
| CACAAATATAACCGTCACAT+AGG | + | chr6_3:5328048-5328067 | Msa0935020:intron | 35.0% | |
| ! | TTCAAATAGGGTAGGTTTTG+TGG | + | chr6_3:5328118-5328137 | Msa0935020:intron | 35.0% |
| !! | TAGGTTTTGTGGTCTTTTGT+GGG | + | chr6_3:5328129-5328148 | Msa0935020:intron | 35.0% |
| ATGGAAAGAAATTGGAAGGT+TGG | + | chr6_3:5328314-5328333 | Msa0935020:intron | 35.0% | |
| GGAAAGATAGGAAATTCAGT+TGG | - | chr6_3:5328567-5328586 | None:intergenic | 35.0% | |
| GGGAGAGTTTGTAACTAATT+TGG | - | chr6_3:5328718-5328737 | None:intergenic | 35.0% | |
| GACAACTCAATGAAACTCTT+TGG | - | chr6_3:5328776-5328795 | None:intergenic | 35.0% | |
| ! | AAGAGTTTCATTGAGTTGTC+GGG | + | chr6_3:5328776-5328795 | Msa0935020:intron | 35.0% |
| AGAACACTCTTAATTCCGAA+GGG | - | chr6_3:5328873-5328892 | None:intergenic | 35.0% | |
| AAGAACACTCTTAATTCCGA+AGG | - | chr6_3:5328874-5328893 | None:intergenic | 35.0% | |
| TACCAAAAATCAGCGTAAAC+AGG | - | chr6_3:5328901-5328920 | None:intergenic | 35.0% | |
| !!! | GATTTTTGGTAAACAATCGC+TGG | + | chr6_3:5328910-5328929 | Msa0935020:intron | 35.0% |
| GGAAATCGTAATGTTCTTGA+AGG | + | chr6_3:5329002-5329021 | Msa0935020:intron | 35.0% | |
| ACTCATTTCTCGATTCCATA+CGG | + | chr6_3:5329213-5329232 | Msa0935020:intron | 35.0% | |
| AGCAACAGATATCTCCAAAA+CGG | - | chr6_3:5329398-5329417 | None:intergenic | 35.0% | |
| AGACCATTCATAATTCCGAA+GGG | - | chr6_3:5329635-5329654 | None:intergenic | 35.0% | |
| AAGACCATTCATAATTCCGA+AGG | - | chr6_3:5329636-5329655 | None:intergenic | 35.0% | |
| TTGGAATAATAATGTCCCGT+CGG | + | chr6_3:5329726-5329745 | Msa0935020:intron | 35.0% | |
| AGATCATTCTTAATTCCGAC+GGG | - | chr6_3:5329744-5329763 | None:intergenic | 35.0% | |
| GTATTGTTACCACTCTGTTA+TGG | - | chr6_3:5329925-5329944 | None:intergenic | 35.0% | |
| GAGAATTACACCCTCAAATA+TGG | - | chr6_3:5329988-5330007 | None:intergenic | 35.0% | |
| TAGCTGAGCTTAATTTATCC+TGG | + | chr6_3:5330047-5330066 | Msa0935020:intron | 35.0% | |
| ACTCAACCTAGTAACAACTT+CGG | + | chr6_3:5330149-5330168 | Msa0935020:intron | 35.0% | |
| ACCGAAGAAGTTACTTATTG+AGG | + | chr6_3:5330257-5330276 | Msa0935020:intron | 35.0% | |
| TGTTAAGAGAATAGAACCGA+CGG | + | chr6_3:5330449-5330468 | Msa0935020:intron | 35.0% | |
| GTCAATTGTCAAGAATCAAG+TGG | - | chr6_3:5330500-5330519 | None:intergenic | 35.0% | |
| TAGTGTAACAAAGAGCTGAT+CGG | + | chr6_3:5330533-5330552 | Msa0935020:intron | 35.0% | |
| ! | TTCGAGCACTCGATTATTTT+AGG | + | chr6_3:5330812-5330831 | Msa0935020:intron | 35.0% |
| GTCATTAGACCTATTCTTTC+AGG | - | chr6_3:5330846-5330865 | None:intergenic | 35.0% | |
| TACAGTTTCTCAAGCTCAAA+TGG | - | chr6_3:5325746-5325765 | None:intergenic | 35.0% | |
| !!! | GCGGTTGTTTTTTGTTACTT+TGG | - | chr6_3:5331148-5331167 | None:intergenic | 35.0% |
| !!! | TTTTGTTGTTCGTTTCTGGT+TGG | - | chr6_3:5331170-5331189 | None:intergenic | 35.0% |
| TATGTTATACTAGCTCGGTT+CGG | - | chr6_3:5331386-5331405 | None:intergenic | 35.0% | |
| CCTTCTTCAAACGATTGATT+TGG | - | chr6_3:5331487-5331506 | None:intergenic | 35.0% | |
| CCAAATCAATCGTTTGAAGA+AGG | + | chr6_3:5331484-5331503 | Msa0935020:intron | 35.0% | |
| ATCAATCGTTTGAAGAAGGT+CGG | + | chr6_3:5331488-5331507 | Msa0935020:intron | 35.0% | |
| CTCATTCTCAATTCTTTGCT+TGG | + | chr6_3:5331847-5331866 | Msa0935020:intron | 35.0% | |
| AGAAATGTTGATCAATTGGG+AGG | - | chr6_3:5332219-5332238 | None:intergenic | 35.0% | |
| ACTCTTGTATCTAAGGAATG+TGG | + | chr6_3:5332252-5332271 | Msa0935020:intron | 35.0% | |
| TAATTCGACACTCTTAAGAC+CGG | - | chr6_3:5332360-5332379 | None:intergenic | 35.0% | |
| TCGTGTCAGACAACTAAAAT+CGG | - | chr6_3:5332409-5332428 | None:intergenic | 35.0% | |
| CAATCAGAGAATGACTATTG+TGG | - | chr6_3:5332530-5332549 | None:intergenic | 35.0% | |
| ! | CTGAGCTTTAGTTATCTCAT+TGG | + | chr6_3:5333082-5333101 | Msa0935020:intron | 35.0% |
| GGGTCATAACATTAGAGAAA+TGG | - | chr6_3:5333111-5333130 | None:intergenic | 35.0% | |
| GGAGCTTCAATTATCTAGTT+AGG | + | chr6_3:5333356-5333375 | Msa0935020:intron | 35.0% | |
| TGTTTATGAGCAGTGGATAT+AGG | + | chr6_3:5333394-5333413 | Msa0935020:intron | 35.0% | |
| GTTTATGAGCAGTGGATATA+GGG | + | chr6_3:5333395-5333414 | Msa0935020:intron | 35.0% | |
| TTTATGAGCAGTGGATATAG+GGG | + | chr6_3:5333396-5333415 | Msa0935020:intron | 35.0% | |
| TAATGTATCGCAGAACATAG+CGG | - | chr6_3:5333458-5333477 | None:intergenic | 35.0% | |
| TAAAATTCCGCTACGCAATA+GGG | - | chr6_3:5333526-5333545 | None:intergenic | 35.0% | |
| TTAAAATTCCGCTACGCAAT+AGG | - | chr6_3:5333527-5333546 | None:intergenic | 35.0% | |
| ATGAGTGAGCTTCAATTATC+TGG | + | chr6_3:5333572-5333591 | Msa0935020:intron | 35.0% | |
| TCATCCCTTCATTTATTTCC+AGG | - | chr6_3:5333770-5333789 | None:intergenic | 35.0% | |
| GTTAAGCCCCTTCTATTATT+AGG | + | chr6_3:5333866-5333885 | Msa0935020:CDS | 35.0% | |
| TGGTGACCTAATAATAGAAG+GGG | - | chr6_3:5333875-5333894 | None:intergenic | 35.0% | |
| !! | GTTGGTGACCTAATAATAGA+AGG | - | chr6_3:5333877-5333896 | None:intergenic | 35.0% |
| TATTAGGTCACCAACACAAA+AGG | + | chr6_3:5333882-5333901 | Msa0935020:exon | 35.0% | |
| CAATAGGGAGAAAAGCTTAA+AGG | - | chr6_3:5333912-5333931 | None:intergenic | 35.0% | |
| ! | AGTACTCTTGTTGTGTATTC+AGG | + | chr6_3:5334054-5334073 | Msa0935020:three_prime_UTR | 35.0% |
| !! | GTATTCAGGTATTGCTTTTG+TGG | + | chr6_3:5334068-5334087 | Msa0935020:three_prime_UTR | 35.0% |
| ATTCATTGTGTGTACCGTGT+AGG | + | chr6_3:5325562-5325581 | Msa0935020:intron | 40.0% | |
| TCAGACTTCCTTGGAGAAAA+CGG | - | chr6_3:5331014-5331033 | None:intergenic | 40.0% | |
| !! | AAAGAAGTGTCAGACTTCCT+TGG | - | chr6_3:5330930-5330949 | None:intergenic | 40.0% |
| AAGTCTGACACTTCTTTCTG+CGG | + | chr6_3:5325846-5325865 | Msa0935020:intron | 40.0% | |
| !! | TATGCTTAGTTTTCCGGTGA+TGG | + | chr6_3:5325883-5325902 | Msa0935020:intron | 40.0% |
| TCTTAGATGTGCTTATCGTG+TGG | + | chr6_3:5325996-5326015 | Msa0935020:intron | 40.0% | |
| GTCAAATAGCTATGGGTAAG+TGG | + | chr6_3:5326113-5326132 | Msa0935020:intron | 40.0% | |
| ! | CTTCCTTCAGATTTGGTTGT+TGG | + | chr6_3:5326553-5326572 | Msa0935020:intron | 40.0% |
| AACCCAACAACCAAATCTGA+AGG | - | chr6_3:5326559-5326578 | None:intergenic | 40.0% | |
| GTGAAGAATAGGGATGTCAA+TGG | + | chr6_3:5326600-5326619 | Msa0935020:intron | 40.0% | |
| CAATGGGTATCCATATGTAC+GGG | + | chr6_3:5326617-5326636 | Msa0935020:intron | 40.0% | |
| CATATTTATCTAACAGGGCG+GGG | - | chr6_3:5326658-5326677 | None:intergenic | 40.0% | |
| CCATATTTATCTAACAGGGC+GGG | - | chr6_3:5326659-5326678 | None:intergenic | 40.0% | |
| ATCTCTATACGGGTAATCCA+CGG | + | chr6_3:5326710-5326729 | Msa0935020:intron | 40.0% | |
| AGTAACCTTTGGATGTGCTA+TGG | - | chr6_3:5327219-5327238 | None:intergenic | 40.0% | |
| GTCCATGTCCATAAAGTAAC+AGG | + | chr6_3:5327379-5327398 | Msa0935020:intron | 40.0% | |
| ATACCCGTTTATTATACCCG+CGG | + | chr6_3:5327409-5327428 | Msa0935020:intron | 40.0% | |
| CATACATCTTGGAGTTAGTG+TGG | + | chr6_3:5327922-5327941 | Msa0935020:intron | 40.0% | |
| TCAACATATGCCCTATGTGA+CGG | - | chr6_3:5328062-5328081 | None:intergenic | 40.0% | |
| !! | GTAGGTTTTGTGGTCTTTTG+TGG | + | chr6_3:5328128-5328147 | Msa0935020:intron | 40.0% |
| !! | AGGTTTTGTGGTCTTTTGTG+GGG | + | chr6_3:5328130-5328149 | Msa0935020:intron | 40.0% |
| CGTCAACACAAGTCAAGAAA+GGG | - | chr6_3:5328819-5328838 | None:intergenic | 40.0% | |
| TCGTCAACACAAGTCAAGAA+AGG | - | chr6_3:5328820-5328839 | None:intergenic | 40.0% | |
| ! | ATCTCCTTTTTCTGTCCCTT+CGG | + | chr6_3:5328855-5328874 | Msa0935020:intron | 40.0% |
| AATTCCGAAGGGACAGAAAA+AGG | - | chr6_3:5328862-5328881 | None:intergenic | 40.0% | |
| !!! | GACCTGTTTACGCTGATTTT+TGG | + | chr6_3:5328896-5328915 | Msa0935020:intron | 40.0% |
| CTGAAATAACTGTCCTTCGA+TGG | + | chr6_3:5329427-5329446 | Msa0935020:intron | 40.0% | |
| !! | TCCAAGGTTTTGTCGAAGTT+GGG | - | chr6_3:5329491-5329510 | None:intergenic | 40.0% |
| !! | TTCCAAGGTTTTGTCGAAGT+TGG | - | chr6_3:5329492-5329511 | None:intergenic | 40.0% |
| ! | GTGGTGTTAAATGCAGTCAA+AGG | - | chr6_3:5329551-5329570 | None:intergenic | 40.0% |
| GTGGTATCACCATATTTGAG+TGG | + | chr6_3:5329824-5329843 | Msa0935020:intron | 40.0% | |
| ! | TTGAGGGTGTAATTCTCGAA+CGG | + | chr6_3:5329991-5330010 | Msa0935020:intron | 40.0% |
| TAAGCTCAGCTACAACTATG+CGG | - | chr6_3:5330039-5330058 | None:intergenic | 40.0% | |
| CTGAGCTTAATTTATCCTGG+AGG | + | chr6_3:5330050-5330069 | Msa0935020:intron | 40.0% | |
| AGCTTAATTTATCCTGGAGG+CGG | + | chr6_3:5330053-5330072 | Msa0935020:intron | 40.0% | |
| ! | AGTCTGCCTTGCACAATTTT+AGG | + | chr6_3:5330086-5330105 | Msa0935020:intron | 40.0% |
| TATCCACCGAAGTTGTTACT+AGG | - | chr6_3:5330158-5330177 | None:intergenic | 40.0% | |
| CTTCGGTGGATAGTAGAATT+TGG | + | chr6_3:5330166-5330185 | Msa0935020:intron | 40.0% | |
| GTTAAGAGAATAGAACCGAC+GGG | + | chr6_3:5330450-5330469 | Msa0935020:intron | 40.0% | |
| AACAAAGAGCTGATCGGAAT+AGG | + | chr6_3:5330539-5330558 | Msa0935020:intron | 40.0% | |
| ! | GACACACGTTGCTTCTAAAA+TGG | - | chr6_3:5330657-5330676 | None:intergenic | 40.0% |
| ! | GTGCTGAACTGAAGCAATTT+TGG | - | chr6_3:5330687-5330706 | None:intergenic | 40.0% |
| AAGTCTGACACTTCTTTCTG+CGG | - | chr6_3:5325846-5325865 | None:intergenic | 40.0% | |
| !! | AAAGAAGTGTCAGACTTCCT+TGG | + | chr6_3:5330930-5330949 | Msa0935020:intron | 40.0% |
| GTTTGAAGAAGGTCGGAAAA+GGG | + | chr6_3:5331495-5331514 | Msa0935020:intron | 40.0% | |
| ! | CGAATCGAATCGAGTTTTAC+CGG | - | chr6_3:5331533-5331552 | None:intergenic | 40.0% |
| !! | AGCTTGTTGGATTGATGCAA+TGG | - | chr6_3:5331783-5331802 | None:intergenic | 40.0% |
| TTGCATCAATCCAACAAGCT+TGG | + | chr6_3:5331783-5331802 | Msa0935020:CDS | 40.0% | |
| TGGCAAATAGCTATGAAGCA+TGG | + | chr6_3:5331919-5331938 | Msa0935020:intron | 40.0% | |
| AACACTTATACAAGCCGTGT+CGG | - | chr6_3:5332321-5332340 | None:intergenic | 40.0% | |
| GTTATATATGTGTCGGACAC+CGG | + | chr6_3:5332338-5332357 | Msa0935020:intron | 40.0% | |
| GACTATTTGCCTATGAAGCA+CGG | - | chr6_3:5332497-5332516 | None:intergenic | 40.0% | |
| AGAATGACTATTGTGGCTAC+TGG | - | chr6_3:5332523-5332542 | None:intergenic | 40.0% | |
| TTATGACCCAAATTGTGGTG+TGG | + | chr6_3:5333122-5333141 | Msa0935020:intron | 40.0% | |
| ATCCAACCACACCACAATTT+GGG | - | chr6_3:5333131-5333150 | None:intergenic | 40.0% | |
| AATCCAACCACACCACAATT+TGG | - | chr6_3:5333132-5333151 | None:intergenic | 40.0% | |
| TCGTCAAATAGCAGCTATAG+CGG | + | chr6_3:5333492-5333511 | Msa0935020:intron | 40.0% | |
| TGAGCTTCAATTATCTGGTC+TGG | + | chr6_3:5333577-5333596 | Msa0935020:intron | 40.0% | |
| ATATTGCATCGCTGTATGAC+TGG | - | chr6_3:5333638-5333657 | None:intergenic | 40.0% | |
| ATTAAACTTGACGCGCACAA+AGG | - | chr6_3:5333693-5333712 | None:intergenic | 40.0% | |
| TGGTGCCTGGAAATAAATGA+AGG | + | chr6_3:5333762-5333781 | Msa0935020:CDS | 40.0% | |
| GGTGCCTGGAAATAAATGAA+GGG | + | chr6_3:5333763-5333782 | Msa0935020:CDS | 40.0% | |
| ! | AGTATGTCCCCTTATTTGCT+TGG | + | chr6_3:5333844-5333863 | Msa0935020:CDS | 40.0% |
| GGCTTAACCAAGCAAATAAG+GGG | - | chr6_3:5333854-5333873 | None:intergenic | 40.0% | |
| GGGCTTAACCAAGCAAATAA+GGG | - | chr6_3:5333855-5333874 | None:intergenic | 40.0% | |
| ATTGTGTGTACCGTGTAGGT+GGG | + | chr6_3:5325566-5325585 | Msa0935020:intron | 45.0% | |
| AGGTGGGTACTACCCATTTA+AGG | + | chr6_3:5325582-5325601 | Msa0935020:intron | 45.0% | |
| AACAAAACCAGCGGTGACAA+AGG | - | chr6_3:5325912-5325931 | None:intergenic | 45.0% | |
| GAGATCAGTTTCCACCATTG+AGG | + | chr6_3:5325969-5325988 | Msa0935020:CDS | 45.0% | |
| CCCGCCCTGTTAGATAAATA+TGG | + | chr6_3:5326656-5326675 | Msa0935020:intron | 45.0% | |
| TCTCTATACGGGTAATCCAC+GGG | + | chr6_3:5326711-5326730 | Msa0935020:intron | 45.0% | |
| CACGGGTATTTAGATACCCA+CGG | + | chr6_3:5326728-5326747 | Msa0935020:intron | 45.0% | |
| TAGATACCCACGGATATTCG+CGG | + | chr6_3:5326738-5326757 | Msa0935020:intron | 45.0% | |
| ACCATCCATAGCACATCCAA+AGG | + | chr6_3:5327211-5327230 | Msa0935020:intron | 45.0% | |
| ACCTTTGGATGTGCTATGGA+TGG | - | chr6_3:5327215-5327234 | None:intergenic | 45.0% | |
| TACCCGTTTATTATACCCGC+GGG | + | chr6_3:5327410-5327429 | Msa0935020:intron | 45.0% | |
| TACCCGCGGGTATAATAAAC+GGG | - | chr6_3:5327415-5327434 | None:intergenic | 45.0% | |
| GTACCCGCGGGTATAATAAA+CGG | - | chr6_3:5327416-5327435 | None:intergenic | 45.0% | |
| ATAAAATCCGTCATGGGCAC+GGG | - | chr6_3:5327455-5327474 | None:intergenic | 45.0% | |
| GATAAAATCCGTCATGGGCA+CGG | - | chr6_3:5327456-5327475 | None:intergenic | 45.0% | |
| TCGCGGATAAAATCCGTCAT+GGG | - | chr6_3:5327461-5327480 | None:intergenic | 45.0% | |
| TTCGCGGATAAAATCCGTCA+TGG | - | chr6_3:5327462-5327481 | None:intergenic | 45.0% | |
| ! | ATTTTATCCGCGAATACCCG+CGG | + | chr6_3:5327468-5327487 | Msa0935020:intron | 45.0% |
| ! | GTCTTTTGTGGGGTTTGTCA+CGG | + | chr6_3:5328140-5328159 | Msa0935020:intron | 45.0% |
| GCAGTGAACTGCATAACAAC+AGG | - | chr6_3:5328179-5328198 | None:intergenic | 45.0% | |
| ACTTGAGCTGATCTGATCTG+TGG | + | chr6_3:5328653-5328672 | Msa0935020:intron | 45.0% | |
| CTTGAGCTGATCTGATCTGT+GGG | + | chr6_3:5328654-5328673 | Msa0935020:intron | 45.0% | |
| ! | GAATTTCGAATGCGCCGTTT+TGG | + | chr6_3:5329381-5329400 | Msa0935020:intron | 45.0% |
| CGACGGATAAAAACCATCGA+AGG | - | chr6_3:5329443-5329462 | None:intergenic | 45.0% | |
| ACAAGACCATAGTCCCTTCT+CGG | + | chr6_3:5329601-5329620 | Msa0935020:intron | 45.0% | |
| CTTAAACCGAGAAGGGACTA+TGG | - | chr6_3:5329610-5329629 | None:intergenic | 45.0% | |
| CATAGTCCCTTCTCGGTTTA+AGG | + | chr6_3:5329608-5329627 | Msa0935020:intron | 45.0% | |
| AAGGGACCTTAAACCGAGAA+GGG | - | chr6_3:5329617-5329636 | None:intergenic | 45.0% | |
| ! | TTCTCGGTTTAAGGTCCCTT+CGG | + | chr6_3:5329617-5329636 | Msa0935020:intron | 45.0% |
| GGTCCCTTCGGAATTATGAA+TGG | + | chr6_3:5329629-5329648 | Msa0935020:intron | 45.0% | |
| GCACTACGACCACTCAAATA+TGG | - | chr6_3:5329836-5329855 | None:intergenic | 45.0% | |
| GTGGCAACACCATATTTGAG+TGG | + | chr6_3:5329891-5329910 | Msa0935020:intron | 45.0% | |
| GTGCTGAGACCACTCAAATA+TGG | - | chr6_3:5329903-5329922 | None:intergenic | 45.0% | |
| GCACTGCCTAAAATTGTGCA+AGG | - | chr6_3:5330095-5330114 | None:intergenic | 45.0% | |
| !! | GCTCTCTTTAAGACGTTTCG+TGG | - | chr6_3:5330117-5330136 | None:intergenic | 45.0% |
| ACGTCTTAAAGAGAGCGACT+TGG | + | chr6_3:5330121-5330140 | Msa0935020:intron | 45.0% | |
| CAACCTAGTAACAACTTCGG+TGG | + | chr6_3:5330152-5330171 | Msa0935020:intron | 45.0% | |
| AACGATGCAATAACACCCGT+CGG | - | chr6_3:5330468-5330487 | None:intergenic | 45.0% | |
| GTGTCAGACTTCCTTGACAA+AGG | + | chr6_3:5330936-5330955 | Msa0935020:intron | 45.0% | |
| GAGAAAACTGCTCTGCGAAT+AGG | + | chr6_3:5331027-5331046 | Msa0935020:intron | 45.0% | |
| !! | TGTTGTTCGTTTCTGGTTGG+CGG | - | chr6_3:5331167-5331186 | None:intergenic | 45.0% |
| GTTCATTGTGTGTACCGTGT+GGG | - | chr6_3:5331364-5331383 | None:intergenic | 45.0% | |
| CGTTTGAAGAAGGTCGGAAA+AGG | + | chr6_3:5331494-5331513 | Msa0935020:intron | 45.0% | |
| AAAAGGGTCGTGAATCCAAC+CGG | + | chr6_3:5331511-5331530 | Msa0935020:intron | 45.0% | |
| ! | TCGAATCGAGTTTTACCGGT+TGG | - | chr6_3:5331529-5331548 | None:intergenic | 45.0% |
| !!! | GGTTTTGATTCACCTACAGC+AGG | + | chr6_3:5331689-5331708 | Msa0935020:intron | 45.0% |
| CAGGTCACTATGTCTCTTTC+CGG | + | chr6_3:5331708-5331727 | Msa0935020:intron | 45.0% | |
| ATGCAATGGAGTTGCTCTGT+AGG | - | chr6_3:5331769-5331788 | None:intergenic | 45.0% | |
| CATCAATCCAACAAGCTTGG+AGG | + | chr6_3:5331786-5331805 | Msa0935020:CDS | 45.0% | |
| AATCCAACAAGCTTGGAGGA+GGG | + | chr6_3:5331790-5331809 | Msa0935020:CDS | 45.0% | |
| GTCATGTCATGTGTACGTGT+CGG | - | chr6_3:5331948-5331967 | None:intergenic | 45.0% | |
| CACATGACATGACACTGACA+CGG | + | chr6_3:5331955-5331974 | Msa0935020:intron | 45.0% | |
| TTGTCTGACACGAGTGTCAT+AGG | + | chr6_3:5332416-5332435 | Msa0935020:intron | 45.0% | |
| TAGAGTTGTCCGTGCTTCAT+AGG | + | chr6_3:5332485-5332504 | Msa0935020:intron | 45.0% | |
| ATCTGTGTGTGTGTGTGTGT+CGG | + | chr6_3:5332973-5332992 | Msa0935020:intron | 45.0% | |
| AAAGAGACATAGTGACCTGC+AGG | - | chr6_3:5331707-5331726 | None:intergenic | 45.0% | |
| ! | TCTGAGGTTGGAGGAAAGAA+AGG | + | chr6_3:5333284-5333303 | Msa0935020:intron | 45.0% |
| GGGGCTTAACCAAGCAAATA+AGG | - | chr6_3:5333856-5333875 | None:intergenic | 45.0% | |
| !! | TAATTTACTTAATTTATTAA+CGG | + | chr6_3:5327318-5327337 | Msa0935020:intron | 5.0% |
| !!! | TTTTTTATTTTTTTTTTTGT+AGG | - | chr6_3:5331418-5331437 | None:intergenic | 5.0% |
| CATTGTGTGTACCGTGTAGG+TGG | + | chr6_3:5325565-5325584 | Msa0935020:intron | 50.0% | |
| ATGGGTAGTACCCACCTACA+CGG | - | chr6_3:5325579-5325598 | None:intergenic | 50.0% | |
| GAGAAAACGGCTCAGCGAAT+AGG | - | chr6_3:5325821-5325840 | None:intergenic | 50.0% | |
| GTGACAAAGGCAACCATCAC+CGG | - | chr6_3:5325899-5325918 | None:intergenic | 50.0% | |
| CGTGGGTATCTAAATACCCG+TGG | - | chr6_3:5326730-5326749 | None:intergenic | 50.0% | |
| AGATACCCACGGATATTCGC+GGG | + | chr6_3:5326739-5326758 | Msa0935020:intron | 50.0% | |
| ACCTGCACACGATACAGGAA+GGG | + | chr6_3:5327144-5327163 | Msa0935020:intron | 50.0% | |
| ! | TTAACGGGTACGAATACCCG+CGG | + | chr6_3:5327334-5327353 | Msa0935020:intron | 50.0% |
| GTAGTTAAACGAGTACCCGC+GGG | - | chr6_3:5327428-5327447 | None:intergenic | 50.0% | |
| GGTAGTTAAACGAGTACCCG+CGG | - | chr6_3:5327429-5327448 | None:intergenic | 50.0% | |
| ! | TTTTATCCGCGAATACCCGC+GGG | + | chr6_3:5327469-5327488 | Msa0935020:intron | 50.0% |
| ACAAAAAAATCCGTGCCCGC+GGG | - | chr6_3:5327487-5327506 | None:intergenic | 50.0% | |
| GACAAAAAAATCCGTGCCCG+CGG | - | chr6_3:5327488-5327507 | None:intergenic | 50.0% | |
| ! | GAGCACGTGCTTTAGTTCGA+CGG | - | chr6_3:5329460-5329479 | None:intergenic | 50.0% |
| ! | TTGTCGAAGTTGGGCTTGCT+GGG | - | chr6_3:5329482-5329501 | None:intergenic | 50.0% |
| TTTGTCGAAGTTGGGCTTGC+TGG | - | chr6_3:5329483-5329502 | None:intergenic | 50.0% | |
| GCCCAACTTCGACAAAACCT+TGG | + | chr6_3:5329487-5329506 | Msa0935020:intron | 50.0% | |
| GAAGGGACCTTAAACCGAGA+AGG | - | chr6_3:5329618-5329637 | None:intergenic | 50.0% | |
| GTCTCAGCACCATAACAGAG+TGG | + | chr6_3:5329913-5329932 | Msa0935020:intron | 50.0% | |
| GCCTATTCGCAGAGCAGTTT+AGG | + | chr6_3:5330899-5330918 | Msa0935020:intron | 50.0% | |
| GCCTAAACTGCTCTGCGAAT+AGG | - | chr6_3:5330903-5330922 | None:intergenic | 50.0% | |
| TTGACAAAGGCAACCATCGC+CGG | + | chr6_3:5330949-5330968 | Msa0935020:intron | 50.0% | |
| ! | TCGCAGAGCAGTTTTCTCCA+AGG | - | chr6_3:5331025-5331044 | None:intergenic | 50.0% |
| GGGTGGGTACTACCCATTTA+AGG | - | chr6_3:5331344-5331363 | None:intergenic | 50.0% | |
| ATTGTGTGTACCGTGTGGGT+GGG | - | chr6_3:5331360-5331379 | None:intergenic | 50.0% | |
| GGTTCATTGTGTGTACCGTG+TGG | - | chr6_3:5331365-5331384 | None:intergenic | 50.0% | |
| GAGACATAGTGACCTGCTGT+AGG | - | chr6_3:5331704-5331723 | None:intergenic | 50.0% | |
| TGTCTCTTTCCGGTCTTGCT+CGG | + | chr6_3:5331718-5331737 | Msa0935020:CDS | 50.0% | |
| CAATCCAACAAGCTTGGAGG+AGG | + | chr6_3:5331789-5331808 | Msa0935020:CDS | 50.0% | |
| ATCCAACAAGCTTGGAGGAG+GGG | + | chr6_3:5331791-5331810 | Msa0935020:CDS | 50.0% | |
| TTCGTCTCAGTTCTCCGACA+CGG | + | chr6_3:5332304-5332323 | Msa0935020:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | + | chr6_3:5333054-5333073 | Msa0935020:intron | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | + | chr6_3:5333053-5333072 | Msa0935020:intron | 50.0% | |
| GACCCAAATTGTGGTGTGGT+TGG | + | chr6_3:5333126-5333145 | Msa0935020:intron | 50.0% | |
| AAGGCGGGATTTGAGAAGGT+GGG | - | chr6_3:5333180-5333199 | None:intergenic | 50.0% | |
| AAGCAAGGCGGGATTTGAGA+AGG | - | chr6_3:5333184-5333203 | None:intergenic | 50.0% | |
| TTTCTCGACACTCCGCAATC+AGG | + | chr6_3:5333202-5333221 | Msa0935020:intron | 50.0% | |
| TCAACGAAGCCTTGCTTCTG+AGG | + | chr6_3:5333268-5333287 | Msa0935020:intron | 50.0% | |
| TTCCTCCAACCTCAGAAGCA+AGG | - | chr6_3:5333280-5333299 | None:intergenic | 50.0% | |
| GCTCTACCGCTATAGCATTG+TGG | + | chr6_3:5333420-5333439 | Msa0935020:intron | 50.0% | |
| GCTATAGCCCTATTGCGTAG+CGG | + | chr6_3:5333516-5333535 | Msa0935020:intron | 50.0% | |
| ACATCGAATTCGACTGCGAG+AGG | + | chr6_3:5333739-5333758 | Msa0935020:CDS | 50.0% | |
| TCAAATGGCTTCCTCCGCGT+CGG | + | chr6_3:5325761-5325780 | Msa0935020:intron | 55.0% | |
| !! | TCGCTGAGCCGTTTTCTCCA+AGG | + | chr6_3:5325823-5325842 | Msa0935020:intron | 55.0% |
| ATGGTTGCCTTTGTCACCGC+TGG | + | chr6_3:5325902-5325921 | Msa0935020:intron | 55.0% | |
| ACGGGTATGGGGACGAAAAC+GGG | - | chr6_3:5326684-5326703 | None:intergenic | 55.0% | |
| CACGGGTATGGGGACGAAAA+CGG | - | chr6_3:5326685-5326704 | None:intergenic | 55.0% | |
| ! | TTTTCGTCCCCATACCCGTG+CGG | + | chr6_3:5326685-5326704 | Msa0935020:intron | 55.0% |
| AGAGATACCCGCACGGGTAT+GGG | - | chr6_3:5326696-5326715 | None:intergenic | 55.0% | |
| TAGAGATACCCGCACGGGTA+TGG | - | chr6_3:5326697-5326716 | None:intergenic | 55.0% | |
| CCGTATAGAGATACCCGCAC+GGG | - | chr6_3:5326702-5326721 | None:intergenic | 55.0% | |
| CCCGTGCGGGTATCTCTATA+CGG | + | chr6_3:5326699-5326718 | Msa0935020:intron | 55.0% | |
| CCCGTATAGAGATACCCGCA+CGG | - | chr6_3:5326703-5326722 | None:intergenic | 55.0% | |
| CCGTGCGGGTATCTCTATAC+GGG | + | chr6_3:5326700-5326719 | Msa0935020:intron | 55.0% | |
| ! | TCGCGGGTACCCATGGATTT+TGG | + | chr6_3:5326755-5326774 | Msa0935020:intron | 55.0% |
| ACACGACCTGCACACGATAC+AGG | + | chr6_3:5327139-5327158 | Msa0935020:intron | 55.0% | |
| GACCTGCACACGATACAGGA+AGG | + | chr6_3:5327143-5327162 | Msa0935020:intron | 55.0% | |
| ACACGATACAGGAAGGGCAG+TGG | + | chr6_3:5327150-5327169 | Msa0935020:intron | 55.0% | |
| ! | TAACGGGTACGAATACCCGC+GGG | + | chr6_3:5327335-5327354 | Msa0935020:intron | 55.0% |
| ! | TTTGATGATACCCGTGCCCG+CGG | - | chr6_3:5327354-5327373 | None:intergenic | 55.0% |
| TGGGGTTTGTCACGGCTGTT+TGG | + | chr6_3:5328148-5328167 | Msa0935020:intron | 55.0% | |
| GGGGTTTGTCACGGCTGTTT+GGG | + | chr6_3:5328149-5328168 | Msa0935020:intron | 55.0% | |
| AATTTATCCTGGAGGCGGCG+TGG | + | chr6_3:5330058-5330077 | Msa0935020:intron | 55.0% | |
| GGCGATGGTTGCCTTTGTCA+AGG | - | chr6_3:5330950-5330969 | None:intergenic | 55.0% | |
| TCAAATGGCTTCCTCCGCGT+CGG | - | chr6_3:5325761-5325780 | None:intergenic | 55.0% | |
| ATGGGTAGTACCCACCCACA+CGG | + | chr6_3:5331347-5331366 | Msa0935020:intron | 55.0% | |
| CATTGTGTGTACCGTGTGGG+TGG | - | chr6_3:5331361-5331380 | None:intergenic | 55.0% | |
| TCCAACAAGCTTGGAGGAGG+GGG | + | chr6_3:5331792-5331811 | Msa0935020:CDS | 55.0% | |
| ! | GTGTGTGTGTGTGTCGGTGT+CGG | + | chr6_3:5332979-5332998 | Msa0935020:intron | 55.0% |
| GTGTGTGGGTGTGTGTGTCT+GGG | + | chr6_3:5333019-5333038 | Msa0935020:intron | 55.0% | |
| GTGTGGTTGGATTCACCTGC+AGG | + | chr6_3:5333139-5333158 | Msa0935020:intron | 55.0% | |
| CAAGGCGGGATTTGAGAAGG+TGG | - | chr6_3:5333181-5333200 | None:intergenic | 55.0% | |
| !! | GAGTGTCGAGAAAGCAAGGC+GGG | - | chr6_3:5333195-5333214 | None:intergenic | 55.0% |
| !! | GGAGTGTCGAGAAAGCAAGG+CGG | - | chr6_3:5333196-5333215 | None:intergenic | 55.0% |
| !! | TGCGGAGTGTCGAGAAAGCA+AGG | - | chr6_3:5333199-5333218 | None:intergenic | 55.0% |
| TCGACACTCCGCAATCAGGA+GGG | + | chr6_3:5333206-5333225 | Msa0935020:intron | 55.0% | |
| AGATCCCTCCCTCCTGATTG+CGG | - | chr6_3:5333217-5333236 | None:intergenic | 55.0% | |
| !! | CGAAGCCTTGCTTCTGAGGT+TGG | + | chr6_3:5333272-5333291 | Msa0935020:intron | 55.0% |
| !! | AGCCTTGCTTCTGAGGTTGG+AGG | + | chr6_3:5333275-5333294 | Msa0935020:intron | 55.0% |
| TCGAATTCGACTGCGAGAGG+TGG | + | chr6_3:5333742-5333761 | Msa0935020:CDS | 55.0% | |
| TCCGCGTCGGAACGAGGTTA+GGG | + | chr6_3:5325774-5325793 | Msa0935020:intron | 60.0% | |
| TTTCGTCCCCATACCCGTGC+GGG | + | chr6_3:5326686-5326705 | Msa0935020:intron | 60.0% | |
| GAGATACCCGCACGGGTATG+GGG | - | chr6_3:5326695-5326714 | None:intergenic | 60.0% | |
| GGGTACCCGCGAATATCCGT+GGG | - | chr6_3:5326747-5326766 | None:intergenic | 60.0% | |
| TGGGTACCCGCGAATATCCG+TGG | - | chr6_3:5326748-5326767 | None:intergenic | 60.0% | |
| CGGATATTCGCGGGTACCCA+TGG | + | chr6_3:5326748-5326767 | Msa0935020:intron | 60.0% | |
| GCCCTTCCTGTATCGTGTGC+AGG | - | chr6_3:5327148-5327167 | None:intergenic | 60.0% | |
| ! | TTGATGATACCCGTGCCCGC+GGG | - | chr6_3:5327353-5327372 | None:intergenic | 60.0% |
| AATCCGTCATGGGCACGGGA+CGG | - | chr6_3:5327451-5327470 | None:intergenic | 60.0% | |
| TCCGCGTCGGAACGAGGTTA+GGG | - | chr6_3:5325774-5325793 | None:intergenic | 60.0% | |
| CTCTTTCCGGTCTTGCTCGG+CGG | + | chr6_3:5331721-5331740 | Msa0935020:CDS | 60.0% | |
| GAAGATCCGCCGAGCAAGAC+CGG | - | chr6_3:5331730-5331749 | None:intergenic | 60.0% | |
| TCCCCCTCCTCCAAGCTTGT+TGG | - | chr6_3:5331796-5331815 | None:intergenic | 60.0% | |
| AACAAGCTTGGAGGAGGGGG+AGG | + | chr6_3:5331795-5331814 | Msa0935020:CDS | 60.0% | |
| AGGAGGGGCCCAACAATCAC+AGG | + | chr6_3:5331815-5331834 | Msa0935020:CDS | 60.0% | |
| TGTCGTACACCGACGCGTGT+CGG | + | chr6_3:5332441-5332460 | Msa0935020:intron | 60.0% | |
| !! | GTGTGTGTCGGTGTCGGTGT+CGG | + | chr6_3:5332985-5333004 | Msa0935020:intron | 60.0% |
| GGTGTGTGGGTGTGTGTGTC+TGG | + | chr6_3:5333018-5333037 | Msa0935020:intron | 60.0% | |
| TGTGGGTGTGTGTGTCTGGG+TGG | + | chr6_3:5333022-5333041 | Msa0935020:intron | 60.0% | |
| GTGGGTGTGTGTGTCTGGGT+GGG | + | chr6_3:5333023-5333042 | Msa0935020:intron | 60.0% | |
| GTGTGTGTGTCTGGGTGGGT+GGG | + | chr6_3:5333027-5333046 | Msa0935020:intron | 60.0% | |
| CTCGACACTCCGCAATCAGG+AGG | + | chr6_3:5333205-5333224 | Msa0935020:intron | 60.0% | |
| ACACTCCGCAATCAGGAGGG+AGG | + | chr6_3:5333209-5333228 | Msa0935020:intron | 60.0% | |
| CACTCCGCAATCAGGAGGGA+GGG | + | chr6_3:5333210-5333229 | Msa0935020:intron | 60.0% | |
| CTAACCTCGTTCCGACGCGG+AGG | - | chr6_3:5331074-5331093 | None:intergenic | 65.0% | |
| CTCCGCGTCGGAACGAGGTT+AGG | + | chr6_3:5325773-5325792 | Msa0935020:intron | 65.0% | |
| CCCCTAACCTCGTTCCGACG+CGG | - | chr6_3:5331071-5331090 | None:intergenic | 65.0% | |
| CCGCGTCGGAACGAGGTTAG+GGG | + | chr6_3:5325775-5325794 | Msa0935020:intron | 65.0% | |
| CGCGTCGGAACGAGGTTAGG+GGG | + | chr6_3:5325776-5325795 | Msa0935020:intron | 65.0% | |
| GGTACGAATACCCGCGGGCA+CGG | + | chr6_3:5327340-5327359 | Msa0935020:intron | 65.0% | |
| GTACGAATACCCGCGGGCAC+GGG | + | chr6_3:5327341-5327360 | Msa0935020:intron | 65.0% | |
| TACCCGTCCCGTGCCCATGA+CGG | + | chr6_3:5327445-5327464 | Msa0935020:intron | 65.0% | |
| ATCCGTCATGGGCACGGGAC+GGG | - | chr6_3:5327450-5327469 | None:intergenic | 65.0% | |
| CTATCAACCACGCCGCCTCC+AGG | - | chr6_3:5330068-5330087 | None:intergenic | 65.0% | |
| CGCGTCGGAACGAGGTTAGG+GGG | - | chr6_3:5325776-5325795 | None:intergenic | 65.0% | |
| CCGCGTCGGAACGAGGTTAG+GGG | - | chr6_3:5325775-5325794 | None:intergenic | 65.0% | |
| CCCCTAACCTCGTTCCGACG+CGG | + | chr6_3:5331071-5331090 | Msa0935020:intron | 65.0% | |
| CTCCGCGTCGGAACGAGGTT+AGG | - | chr6_3:5325773-5325792 | None:intergenic | 65.0% | |
| CTAACCTCGTTCCGACGCGG+AGG | + | chr6_3:5331074-5331093 | Msa0935020:intron | 65.0% | |
| AAGCTTGGAGGAGGGGGAGG+AGG | + | chr6_3:5331798-5331817 | Msa0935020:CDS | 65.0% | |
| AGCTTGGAGGAGGGGGAGGA+GGG | + | chr6_3:5331799-5331818 | Msa0935020:CDS | 65.0% | |
| CTGCAGTGTCCGACACGCGT+CGG | - | chr6_3:5332453-5332472 | None:intergenic | 65.0% | |
| GCGTGTCGGACACTGCAGCA+CGG | + | chr6_3:5332455-5332474 | Msa0935020:intron | 65.0% | |
| !! | GTCGGTGTCGGTGTCGGTGT+CGG | + | chr6_3:5332991-5333010 | Msa0935020:intron | 65.0% |
| !! | TGTCGGTGTCGGTGTCGGTG+TGG | + | chr6_3:5332990-5333009 | Msa0935020:intron | 65.0% |
| !! | GTCGGTGTCGGTGTCGGTGT+GGG | + | chr6_3:5332991-5333010 | Msa0935020:intron | 65.0% |
| !! | TCGGTGTCGGTGTGGGTGTG+TGG | + | chr6_3:5333004-5333023 | Msa0935020:intron | 65.0% |
| !! | CGGTGTCGGTGTGGGTGTGT+GGG | + | chr6_3:5333005-5333024 | Msa0935020:intron | 65.0% |
| GGTGTGTGTGTCTGGGTGGG+TGG | + | chr6_3:5333026-5333045 | Msa0935020:intron | 65.0% | |
| TGTGTGTCTGGGTGGGTGGG+TGG | + | chr6_3:5333030-5333049 | Msa0935020:intron | 65.0% | |
| GTGTGTCTGGGTGGGTGGGT+GGG | + | chr6_3:5333031-5333050 | Msa0935020:intron | 65.0% | |
| GCTTCCTCCGCGTCGGAACG+AGG | + | chr6_3:5325768-5325787 | Msa0935020:intron | 70.0% | |
| TCCGCGAATACCCGCGGGCA+CGG | + | chr6_3:5327474-5327493 | Msa0935020:intron | 70.0% | |
| TCCGTGCCCGCGGGTATTCG+CGG | - | chr6_3:5327478-5327497 | None:intergenic | 70.0% | |
| GCTTCCTCCGCGTCGGAACG+AGG | - | chr6_3:5325768-5325787 | None:intergenic | 70.0% | |
| GCTTGGAGGAGGGGGAGGAG+GGG | + | chr6_3:5331800-5331819 | Msa0935020:CDS | 70.0% | |
| CGACTGCGAGAGGTGGTGCC+TGG | + | chr6_3:5333749-5333768 | Msa0935020:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 5325473 | 5334127 | 5325473 | ID=Msa0935020;Name=Msa0935020 |
| chr6_3 | mRNA | 5325473 | 5334127 | 5325473 | ID=Msa0935020-mRNA-1;Parent=Msa0935020;Name=Msa0935020-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.33|0.5|0.5|0.33|0.75|4|240|136 |
| chr6_3 | exon | 5325473 | 5325480 | 5325473 | ID=Msa0935020-mRNA-1:exon:1633;Parent=Msa0935020-mRNA-1 |
| chr6_3 | exon | 5325963 | 5325990 | 5325963 | ID=Msa0935020-mRNA-1:exon:1634;Parent=Msa0935020-mRNA-1 |
| chr6_3 | exon | 5331711 | 5331836 | 5331711 | ID=Msa0935020-mRNA-1:exon:1635;Parent=Msa0935020-mRNA-1 |
| chr6_3 | exon | 5333639 | 5334127 | 5333639 | ID=Msa0935020-mRNA-1:exon:1636;Parent=Msa0935020-mRNA-1 |
| chr6_3 | CDS | 5325473 | 5325480 | 5325473 | ID=Msa0935020-mRNA-1:cds;Parent=Msa0935020-mRNA-1 |
| chr6_3 | CDS | 5325963 | 5325990 | 5325963 | ID=Msa0935020-mRNA-1:cds;Parent=Msa0935020-mRNA-1 |
| chr6_3 | CDS | 5331711 | 5331836 | 5331711 | ID=Msa0935020-mRNA-1:cds;Parent=Msa0935020-mRNA-1 |
| chr6_3 | CDS | 5333639 | 5333887 | 5333639 | ID=Msa0935020-mRNA-1:cds;Parent=Msa0935020-mRNA-1 |
| chr6_3 | three_prime_UTR | 5333888 | 5334127 | 5333888 | ID=Msa0935020-mRNA-1:three_prime_utr;Parent=Msa0935020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
