Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951730 | sp|P62929|ALB1D_PEA | 43.299 | 97 | 47 | 5 | 82 | 177 | 41 | 130 | 1.56e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951730 | A0A072U9W9 | 75.904 | 83 | 13 | 1 | 1 | 76 | 22 | 104 | 6.02e-35 | 129 |
| Msa0951730 | A0A072U9W9 | 89.109 | 101 | 11 | 0 | 77 | 177 | 37 | 137 | 1.29e-58 | 189 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0708680 | Msa0951730 | 0.803386 | 3.573962e-49 | -8.615850e-47 |
| Msa0757550 | Msa0951730 | 0.810049 | 1.398337e-50 | -8.615850e-47 |
| Msa0414480 | Msa0951730 | 0.800081 | 1.703262e-48 | -8.615850e-47 |
| Msa0591490 | Msa0951730 | 0.809801 | 1.581146e-50 | -8.615850e-47 |
| Msa0896920 | Msa0951730 | 0.818047 | 2.403546e-52 | -8.615850e-47 |
| Msa0951730 | Msa1191350 | 0.812699 | 3.717011e-51 | -8.615850e-47 |
| Msa0951730 | Msa1238250 | 0.810145 | 1.333295e-50 | -8.615850e-47 |
| Msa0951730 | Msa1319030 | 0.819513 | 1.116632e-52 | -8.615850e-47 |
| Msa0951730 | Msa1319190 | 0.806361 | 8.541057e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951730 | MtrunA17_Chr6g0468601 | 89.109 | 101 | 11 | 0 | 77 | 177 | 37 | 137 | 2.48e-62 | 189 |
| Msa0951730 | MtrunA17_Chr6g0468601 | 75.904 | 83 | 13 | 1 | 1 | 76 | 22 | 104 | 1.16e-38 | 129 |
| Msa0951730 | MtrunA17_Chr6g0468621 | 78.000 | 100 | 15 | 3 | 80 | 177 | 40 | 134 | 4.84e-47 | 150 |
| Msa0951730 | MtrunA17_Chr6g0468621 | 78.481 | 79 | 14 | 2 | 1 | 76 | 22 | 100 | 6.41e-37 | 124 |
| Msa0951730 | MtrunA17_Chr7g0225821 | 68.293 | 82 | 22 | 2 | 81 | 161 | 43 | 121 | 1.57e-32 | 112 |
| Msa0951730 | MtrunA17_Chr7g0225821 | 62.963 | 81 | 25 | 2 | 1 | 76 | 24 | 104 | 2.84e-26 | 97.1 |
| Msa0951730 | MtrunA17_Chr7g0236791 | 43.519 | 108 | 48 | 2 | 79 | 173 | 27 | 134 | 1.03e-20 | 83.2 |
| Msa0951730 | MtrunA17_Chr7g0236801 | 47.561 | 82 | 41 | 1 | 92 | 173 | 56 | 135 | 2.29e-20 | 82.0 |
| Msa0951730 | MtrunA17_Chr3g0111131 | 43.299 | 97 | 49 | 2 | 76 | 170 | 37 | 129 | 4.82e-20 | 81.3 |
| Msa0951730 | MtrunA17_Chr3g0111081 | 45.652 | 92 | 48 | 1 | 82 | 173 | 41 | 130 | 1.27e-19 | 80.1 |
| Msa0951730 | MtrunA17_Chr3g0104571 | 50.526 | 95 | 44 | 2 | 79 | 172 | 39 | 131 | 1.34e-19 | 80.1 |
| Msa0951730 | MtrunA17_Chr3g0111221 | 42.222 | 90 | 50 | 1 | 84 | 173 | 23 | 110 | 2.30e-19 | 79.0 |
| Msa0951730 | MtrunA17_Chr3g0111071 | 44.565 | 92 | 49 | 1 | 82 | 173 | 41 | 130 | 3.90e-19 | 79.0 |
| Msa0951730 | MtrunA17_Chr3g0111261 | 44.444 | 117 | 56 | 5 | 59 | 173 | 23 | 132 | 1.35e-18 | 77.4 |
| Msa0951730 | MtrunA17_Chr6g0456951 | 48.315 | 89 | 42 | 3 | 86 | 173 | 48 | 133 | 1.58e-18 | 77.4 |
| Msa0951730 | MtrunA17_Chr3g0090571 | 39.423 | 104 | 50 | 3 | 86 | 177 | 51 | 153 | 6.58e-17 | 73.6 |
| Msa0951730 | MtrunA17_Chr8g0344771 | 44.444 | 90 | 46 | 3 | 85 | 173 | 24 | 110 | 1.41e-16 | 72.0 |
| Msa0951730 | MtrunA17_Chr3g0111281 | 50.000 | 72 | 36 | 0 | 102 | 173 | 65 | 136 | 1.74e-16 | 72.0 |
| Msa0951730 | MtrunA17_Chr7g0232011 | 39.583 | 96 | 53 | 3 | 79 | 174 | 37 | 127 | 2.15e-16 | 72.0 |
| Msa0951730 | MtrunA17_Chr7g0232011 | 43.902 | 82 | 36 | 4 | 1 | 76 | 21 | 98 | 6.95e-12 | 60.1 |
| Msa0951730 | MtrunA17_Chr8g0344801 | 40.860 | 93 | 52 | 2 | 86 | 177 | 9 | 99 | 2.24e-16 | 70.9 |
| Msa0951730 | MtrunA17_Chr8g0344791 | 43.023 | 86 | 46 | 2 | 86 | 170 | 25 | 108 | 1.68e-15 | 68.9 |
| Msa0951730 | MtrunA17_Chr6g0464071 | 39.474 | 114 | 55 | 4 | 70 | 173 | 21 | 130 | 1.89e-15 | 69.3 |
| Msa0951730 | MtrunA17_Chr3g0111351 | 36.441 | 118 | 64 | 4 | 59 | 173 | 31 | 140 | 6.55e-15 | 68.2 |
| Msa0951730 | MtrunA17_Chr3g0111111 | 55.357 | 56 | 25 | 0 | 118 | 173 | 81 | 136 | 7.48e-15 | 67.8 |
| Msa0951730 | MtrunA17_Chr3g0111241 | 41.489 | 94 | 41 | 3 | 83 | 173 | 44 | 126 | 2.88e-14 | 66.2 |
| Msa0951730 | MtrunA17_Chr7g0231991 | 41.667 | 84 | 47 | 2 | 93 | 174 | 32 | 115 | 3.18e-14 | 65.9 |
| Msa0951730 | MtrunA17_Chr6g0456991 | 44.872 | 78 | 40 | 2 | 86 | 162 | 29 | 104 | 1.03e-13 | 63.9 |
| Msa0951730 | MtrunA17_Chr3g0111311 | 41.935 | 93 | 43 | 4 | 64 | 156 | 10 | 91 | 1.52e-13 | 63.2 |
| Msa0951730 | MtrunA17_Chr1g0153591 | 42.857 | 84 | 34 | 3 | 82 | 164 | 41 | 111 | 1.17e-12 | 61.2 |
| Msa0951730 | MtrunA17_Chr4g0012121 | 33.588 | 131 | 75 | 3 | 43 | 173 | 21 | 139 | 2.77e-12 | 61.2 |
| Msa0951730 | MtrunA17_Chr3g0111201 | 50.000 | 50 | 25 | 0 | 124 | 173 | 3 | 52 | 2.86e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 45 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGTCCTAATGTTGATTA+TGG | 0.176691 | 6_3:+43621971 | Msa0951730:CDS |
| AGCATCTTCAAGAAGTCTTT+TGG | 0.221192 | 6_3:-43622058 | None:intergenic |
| CCTAGCCCTAATGTCGATTA+TGG | 0.228312 | 6_3:+43615126 | Msa0951730:CDS |
| CACAACCTACGCCGCATGTT+CGG | 0.314931 | 6_3:-43614972 | None:intergenic |
| CACAACCTTCACCGCACGTT+TGG | 0.331360 | 6_3:-43621796 | None:intergenic |
| CACAAACCATAATCGACATT+AGG | 0.377224 | 6_3:-43615132 | None:intergenic |
| ACAACCTTCACCGCACGTTT+GGG | 0.398282 | 6_3:-43621795 | None:intergenic |
| AGAAGCAAATCGTTGTTATC+TGG | 0.398330 | 6_3:+43614930 | Msa0951730:CDS |
| ACAAACCATAATCGACATTA+GGG | 0.398962 | 6_3:-43615131 | None:intergenic |
| TTTGTTTCCCCACCGATCCA+TGG | 0.405497 | 6_3:+43621819 | Msa0951730:CDS |
| ACAACCTACGCCGCATGTTC+GGG | 0.450039 | 6_3:-43614971 | None:intergenic |
| ACAAGATCTTTATATGATGC+AGG | 0.450360 | 6_3:-43615018 | None:intergenic |
| ACAAGATCTTTATATGATGC+AGG | 0.450360 | 6_3:-43621863 | None:intergenic |
| CACAAACCATAATCAACATT+AGG | 0.450638 | 6_3:-43621977 | None:intergenic |
| GGCGTAGGTTGTGTTTGTTT+CGG | 0.463748 | 6_3:+43614982 | Msa0951730:CDS |
| TTCCCCACCGATCCATGGGC+GGG | 0.480634 | 6_3:+43621824 | Msa0951730:CDS |
| AAAGATCTTGTGAAGATACC+TGG | 0.482787 | 6_3:+43615030 | Msa0951730:CDS |
| AAAGATCTTGTGAAGATACC+TGG | 0.482787 | 6_3:+43621875 | Msa0951730:CDS |
| ATCTTCTGCCTCAGATAAAG+AGG | 0.487203 | 6_3:-43622005 | None:intergenic |
| TTGTTTCCCCACCGATCCAT+GGG | 0.488348 | 6_3:+43621820 | Msa0951730:CDS |
| CTTCTTGAAGATGCTTGAGA+TGG | 0.501142 | 6_3:+43622066 | Msa0951730:CDS |
| TTTCCCCACCGATCCATGGG+CGG | 0.529956 | 6_3:+43621823 | Msa0951730:CDS |
| ACATCCCAAACGTGCGGTGA+AGG | 0.531716 | 6_3:+43621791 | Msa0951730:CDS |
| TTCACCCGCCCATGGATCGG+TGG | 0.547014 | 6_3:-43621828 | None:intergenic |
| CCATAATCGACATTAGGGCT+AGG | 0.550710 | 6_3:-43615126 | None:intergenic |
| GATCTTTATATGATGCAGGT+TGG | 0.554280 | 6_3:-43615014 | None:intergenic |
| GATCTTTATATGATGCAGGT+TGG | 0.554280 | 6_3:-43621859 | None:intergenic |
| GAATGCAAAGAGAAGGGACG+TGG | 0.558645 | 6_3:+43615084 | Msa0951730:CDS |
| GAATGCAAAGAGAAGGGACG+TGG | 0.558645 | 6_3:+43621929 | Msa0951730:CDS |
| TCATGTGGAATGCAAAGAGA+AGG | 0.568615 | 6_3:+43615077 | Msa0951730:CDS |
| TCATGTGGAATGCAAAGAGA+AGG | 0.568615 | 6_3:+43621922 | Msa0951730:CDS |
| GTGTGTTGCCTCTTTATCTG+AGG | 0.572934 | 6_3:+43621997 | Msa0951730:CDS |
| ATATTCACCCGCCCATGGAT+CGG | 0.576253 | 6_3:-43621831 | None:intergenic |
| CCATAATCAACATTAGGACT+AGG | 0.583229 | 6_3:-43621971 | None:intergenic |
| CAATCATATTCACCCGCCCA+TGG | 0.588423 | 6_3:-43621836 | None:intergenic |
| AAGATCTTGTGAAGATACCT+GGG | 0.596931 | 6_3:+43615031 | Msa0951730:CDS |
| AAGATCTTGTGAAGATACCT+GGG | 0.596931 | 6_3:+43621876 | Msa0951730:CDS |
| ACATCCCGAACATGCGGCGT+AGG | 0.606977 | 6_3:+43614967 | Msa0951730:CDS |
| CATGTGGAATGCAAAGAGAA+GGG | 0.628774 | 6_3:+43615078 | Msa0951730:CDS |
| CATGTGGAATGCAAAGAGAA+GGG | 0.628774 | 6_3:+43621923 | Msa0951730:CDS |
| CACCCGCCCATGGATCGGTG+GGG | 0.672591 | 6_3:-43621826 | None:intergenic |
| TCAGACACATCCCGAACATG+CGG | 0.679378 | 6_3:+43614961 | Msa0951730:CDS |
| AATGCAAAGAGAAGGGACGT+GGG | 0.703464 | 6_3:+43615085 | Msa0951730:CDS |
| AATGCAAAGAGAAGGGACGT+GGG | 0.703464 | 6_3:+43621930 | Msa0951730:CDS |
| TCAGCGACATCCCAAACGTG+CGG | 0.732788 | 6_3:+43621785 | Msa0951730:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTAAATTTTCCTTTTT+TGG | + | chr6_3:43616425-43616444 | Msa0951730:intron | 10.0% |
| !! | TCTAAAAAAAAAAAAATTAC+AGG | + | chr6_3:43620332-43620351 | Msa0951730:intron | 10.0% |
| !! | CTAAAAAAAAAAAAATTACA+GGG | + | chr6_3:43620333-43620352 | Msa0951730:intron | 10.0% |
| !! | TAAAAAAAAAAAAATTACAG+GGG | + | chr6_3:43620334-43620353 | Msa0951730:intron | 10.0% |
| !! | TCTTCATTTATAAAAATAAA+GGG | - | chr6_3:43620506-43620525 | None:intergenic | 10.0% |
| !! | TTCTTCATTTATAAAAATAA+AGG | - | chr6_3:43620507-43620526 | None:intergenic | 10.0% |
| !!! | TTTAATTTTTTTTCCATGTT+AGG | + | chr6_3:43615462-43615481 | Msa0951730:intron | 15.0% |
| !!! | CTTTCGATATATATTTTTTT+TGG | + | chr6_3:43615681-43615700 | Msa0951730:intron | 15.0% |
| !! | ATTAATAAATTGAGCAAATA+TGG | + | chr6_3:43615993-43616012 | Msa0951730:intron | 15.0% |
| !! | TTAATAAATTGAGCAAATAT+GGG | + | chr6_3:43615994-43616013 | Msa0951730:intron | 15.0% |
| !!! | AATATGATTTGATTCATTTT+TGG | + | chr6_3:43618410-43618429 | Msa0951730:intron | 15.0% |
| !! | ATATGAGTATATATAGAAAA+GGG | - | chr6_3:43618553-43618572 | None:intergenic | 15.0% |
| !!! | GACTTATAAATTTTAGTATA+TGG | - | chr6_3:43619284-43619303 | None:intergenic | 15.0% |
| !! | AAATTACAAAGAAATAAGTT+TGG | - | chr6_3:43620023-43620042 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAATTACAGG+GGG | + | chr6_3:43620335-43620354 | Msa0951730:intron | 15.0% |
| !! | ATTACAAAATATTAACTTTC+AGG | - | chr6_3:43620375-43620394 | None:intergenic | 15.0% |
| !! | AAAAAAAAATCTTATAAGCA+AGG | + | chr6_3:43621489-43621508 | Msa0951730:intron | 15.0% |
| !! | TTAAGAATTTAGATTGCATA+TGG | + | chr6_3:43615528-43615547 | Msa0951730:intron | 20.0% |
| !! | TACATCTGTTAAACTTAAAT+AGG | + | chr6_3:43615914-43615933 | Msa0951730:intron | 20.0% |
| !! | ACATCTGTTAAACTTAAATA+GGG | + | chr6_3:43615915-43615934 | Msa0951730:intron | 20.0% |
| !!! | GTTATTTTCTAGAGTATTTT+AGG | - | chr6_3:43615952-43615971 | None:intergenic | 20.0% |
| !!! | TTAATCTTCTGTTTTTGTTT+CGG | - | chr6_3:43615978-43615997 | None:intergenic | 20.0% |
| !!! | TTCAAATGATTCTAATTTTC+AGG | - | chr6_3:43616051-43616070 | None:intergenic | 20.0% |
| !! | TTTATTTATGCTCAATTCAA+TGG | - | chr6_3:43616291-43616310 | None:intergenic | 20.0% |
| !! | AATTGAGCATAAATAAACAT+AGG | + | chr6_3:43616294-43616313 | Msa0951730:intron | 20.0% |
| !! | ATTGAGCATAAATAAACATA+GGG | + | chr6_3:43616295-43616314 | Msa0951730:intron | 20.0% |
| !!! | AAATATAGTAGCTTTTGTAT+TGG | + | chr6_3:43616358-43616377 | Msa0951730:intron | 20.0% |
| !! | AATAAAATTTCACCTTACAA+TGG | + | chr6_3:43617375-43617394 | Msa0951730:intron | 20.0% |
| !! | AATCAAACTATTAGAAACAA+AGG | - | chr6_3:43618190-43618209 | None:intergenic | 20.0% |
| !! | ATAATATAAACTTTCATCGT+AGG | + | chr6_3:43618386-43618405 | Msa0951730:intron | 20.0% |
| !! | GATATGAGTATATATAGAAA+AGG | - | chr6_3:43618554-43618573 | None:intergenic | 20.0% |
| !! | CCATAATGATTCTTATAAAA+GGG | - | chr6_3:43618647-43618666 | None:intergenic | 20.0% |
| !! | ACCATAATGATTCTTATAAA+AGG | - | chr6_3:43618648-43618667 | None:intergenic | 20.0% |
| !!! | ATAACAAGGTATTTTTTTTG+AGG | + | chr6_3:43619194-43619213 | Msa0951730:intron | 20.0% |
| !!! | TAACAAGGTATTTTTTTTGA+GGG | + | chr6_3:43619195-43619214 | Msa0951730:intron | 20.0% |
| !! | ATTTCAAATTATTCCTTCTT+AGG | + | chr6_3:43619705-43619724 | Msa0951730:intron | 20.0% |
| !!! | ATATTAACTTTCAGGTTAAT+AGG | - | chr6_3:43620367-43620386 | None:intergenic | 20.0% |
| !! | TAATTACATTAATAATGGCT+GGG | - | chr6_3:43620602-43620621 | None:intergenic | 20.0% |
| !! | ATAATTACATTAATAATGGC+TGG | - | chr6_3:43620603-43620622 | None:intergenic | 20.0% |
| !! | TGAACAAAAATAATAGAAAG+AGG | - | chr6_3:43621128-43621147 | None:intergenic | 20.0% |
| !! | TCATTACTCATAACTTATTA+AGG | + | chr6_3:43621207-43621226 | Msa0951730:intron | 20.0% |
| !!! | TTTTTATAATAGATCTAGGA+CGG | - | chr6_3:43621238-43621257 | None:intergenic | 20.0% |
| !!! | TTCCTTTTTATAATAGATCT+AGG | - | chr6_3:43621242-43621261 | None:intergenic | 20.0% |
| !!! | TAAAAAGGAACATTAAGTTT+TGG | + | chr6_3:43621252-43621271 | Msa0951730:intron | 20.0% |
| !! | AAAATTGGAAAAAGAAAGTA+AGG | - | chr6_3:43621282-43621301 | None:intergenic | 20.0% |
| !!! | TTTTCCAATTTTTCTTTTCA+CGG | + | chr6_3:43621290-43621309 | Msa0951730:intron | 20.0% |
| !!! | TTTGCTTCTACTTTTTTCAT+CGG | - | chr6_3:43614919-43614938 | None:intergenic | 25.0% |
| !! | TATCAAGGATGTAGATTTTA+TGG | - | chr6_3:43615263-43615282 | None:intergenic | 25.0% |
| ! | ATATAACTGATGCATGTAAA+TGG | + | chr6_3:43615345-43615364 | Msa0951730:intron | 25.0% |
| ! | TATAACTGATGCATGTAAAT+GGG | + | chr6_3:43615346-43615365 | Msa0951730:intron | 25.0% |
| ! | TGTTACATTCCTAGTAATAT+TGG | + | chr6_3:43615389-43615408 | Msa0951730:intron | 25.0% |
| !!! | TCGAGATTGTATTAGTTTTA+AGG | + | chr6_3:43615426-43615445 | Msa0951730:intron | 25.0% |
| !!! | CGAGATTGTATTAGTTTTAA+GGG | + | chr6_3:43615427-43615446 | Msa0951730:intron | 25.0% |
| !!! | AACTTGTTCTTTTTCAATCT+AGG | - | chr6_3:43615792-43615811 | None:intergenic | 25.0% |
| ! | AACATATGAAAATAGAGTTC+CGG | + | chr6_3:43615823-43615842 | Msa0951730:intron | 25.0% |
| !!! | ACGTCTATTATGCTTTTTAA+TGG | - | chr6_3:43616028-43616047 | None:intergenic | 25.0% |
| !!! | TATACTAGAGAGTATTCTTA+AGG | + | chr6_3:43616541-43616560 | Msa0951730:intron | 25.0% |
| ! | TGAGAAAAAATACGTAGTAT+AGG | - | chr6_3:43616709-43616728 | None:intergenic | 25.0% |
| ! | GAATTTACAATGAATGACTT+GGG | - | chr6_3:43616792-43616811 | None:intergenic | 25.0% |
| ! | TGAATTTACAATGAATGACT+TGG | - | chr6_3:43616793-43616812 | None:intergenic | 25.0% |
| ! | ATATAGCAGAAGATAAGTTA+TGG | + | chr6_3:43616881-43616900 | Msa0951730:intron | 25.0% |
| ! | AGAAATTGTGAAACTAAAAG+CGG | + | chr6_3:43617345-43617364 | Msa0951730:intron | 25.0% |
| ! | TTAAGGTTAGAAGAAAAACA+AGG | + | chr6_3:43617592-43617611 | Msa0951730:intron | 25.0% |
| ! | TAAGGTTAGAAGAAAAACAA+GGG | + | chr6_3:43617593-43617612 | Msa0951730:intron | 25.0% |
| ! | AAATCAACCAAATGAGTTAT+TGG | - | chr6_3:43617711-43617730 | None:intergenic | 25.0% |
| !! | TTTCATGATGTTTGTTAGAT+AGG | + | chr6_3:43617774-43617793 | Msa0951730:intron | 25.0% |
| !!! | TCGATTCATTATGTTGTTTT+TGG | + | chr6_3:43618508-43618527 | Msa0951730:intron | 25.0% |
| ! | AATAGATGCAAATGATTAAG+TGG | - | chr6_3:43618592-43618611 | None:intergenic | 25.0% |
| !! | CCCTTTTATAAGAATCATTA+TGG | + | chr6_3:43618644-43618663 | Msa0951730:intron | 25.0% |
| !! | AATCAACCATTCAATTTTAG+TGG | + | chr6_3:43619000-43619019 | Msa0951730:intron | 25.0% |
| ! | AAAATTAAACGAAGTCAAAG+AGG | - | chr6_3:43619130-43619149 | None:intergenic | 25.0% |
| !!! | TTGACTTCGTTTAATTTTGT+TGG | + | chr6_3:43619132-43619151 | Msa0951730:intron | 25.0% |
| !!! | TGACTTCGTTTAATTTTGTT+GGG | + | chr6_3:43619133-43619152 | Msa0951730:intron | 25.0% |
| !! | CTTGTTATCATCAAAACTTA+AGG | - | chr6_3:43619182-43619201 | None:intergenic | 25.0% |
| !!! | CTTAAGTTTTGATGATAACA+AGG | + | chr6_3:43619180-43619199 | Msa0951730:intron | 25.0% |
| !! | CAAGGTATTAAAAGTTCAAT+TGG | + | chr6_3:43619228-43619247 | Msa0951730:intron | 25.0% |
| ! | ATAGAGGAATTATAAGACAT+TGG | + | chr6_3:43619552-43619571 | Msa0951730:intron | 25.0% |
| ! | TCTTTCATACCTCTATATAA+AGG | + | chr6_3:43619812-43619831 | Msa0951730:intron | 25.0% |
| ! | GTTCACAATACAAATCAAAT+TGG | - | chr6_3:43619972-43619991 | None:intergenic | 25.0% |
| ! | AAGACACAAAACAATTATCA+TGG | - | chr6_3:43620222-43620241 | None:intergenic | 25.0% |
| ! | AATTCAAAGTCTAGAGATTA+TGG | - | chr6_3:43620299-43620318 | None:intergenic | 25.0% |
| ! | TAAACGAGCTAGTAATTATA+TGG | + | chr6_3:43620551-43620570 | Msa0951730:intron | 25.0% |
| ! | AAACGAGCTAGTAATTATAT+GGG | + | chr6_3:43620552-43620571 | Msa0951730:intron | 25.0% |
| ! | TAATTATATGGGCACATTAA+TGG | + | chr6_3:43620563-43620582 | Msa0951730:intron | 25.0% |
| ! | AATTACATTAATAATGGCTG+GGG | - | chr6_3:43620601-43620620 | None:intergenic | 25.0% |
| !!! | ACCATTTTGAAAAAACTTGT+GGG | - | chr6_3:43621177-43621196 | None:intergenic | 25.0% |
| !!! | AACCATTTTGAAAAAACTTG+TGG | - | chr6_3:43621178-43621197 | None:intergenic | 25.0% |
| !!! | ACAAGTTTTTTCAAAATGGT+TGG | + | chr6_3:43621177-43621196 | Msa0951730:intron | 25.0% |
| ! | GTCCTAGATCTATTATAAAA+AGG | + | chr6_3:43621237-43621256 | Msa0951730:intron | 25.0% |
| !! | TAAAATCGAAATTTTGCTTC+AGG | + | chr6_3:43621516-43621535 | Msa0951730:intron | 25.0% |
| ! | TATGATGTTCCAACTTTAAT+TGG | + | chr6_3:43621694-43621713 | Msa0951730:intron | 25.0% |
| ! | ATGAAGAAACCAATTAAAGT+TGG | - | chr6_3:43621706-43621725 | None:intergenic | 25.0% |
| ! | AACAAACAACCATATAACAA+CGG | - | chr6_3:43621766-43621785 | None:intergenic | 25.0% |
| !!! | TTGCTTCTACTTTTTTCATC+GGG | - | chr6_3:43614918-43614937 | None:intergenic | 30.0% |
| ACAAGATCTTTATATGATGC+AGG | - | chr6_3:43615021-43615040 | None:intergenic | 30.0% | |
| ! | CAAAAGTTAGTATTTTTCCC+AGG | - | chr6_3:43615051-43615070 | None:intergenic | 30.0% |
| ACAAACCATAATCGACATTA+GGG | - | chr6_3:43615134-43615153 | None:intergenic | 30.0% | |
| TTTATTTCCAATCGATGAGT+TGG | + | chr6_3:43615313-43615332 | Msa0951730:intron | 30.0% | |
| TACATGCATCAGTTATATCT+AGG | - | chr6_3:43615343-43615362 | None:intergenic | 30.0% | |
| TAAATAATGAGCAGCTTGAT+TGG | - | chr6_3:43615495-43615514 | None:intergenic | 30.0% | |
| AAAACTGCATAAATACAAGG+CGG | - | chr6_3:43615566-43615585 | None:intergenic | 30.0% | |
| AAGAATTAGAGAACGAGTAA+TGG | - | chr6_3:43615664-43615683 | None:intergenic | 30.0% | |
| ! | AAGTTTTCTCAATTTTCTGG+TGG | - | chr6_3:43615852-43615871 | None:intergenic | 30.0% |
| ! | GAGAAGTTTTCTCAATTTTC+TGG | - | chr6_3:43615855-43615874 | None:intergenic | 30.0% |
| TTTAACAGATGTAGCTTAAG+GGG | - | chr6_3:43615907-43615926 | None:intergenic | 30.0% | |
| GTTTAACAGATGTAGCTTAA+GGG | - | chr6_3:43615908-43615927 | None:intergenic | 30.0% | |
| AGTTTAACAGATGTAGCTTA+AGG | - | chr6_3:43615909-43615928 | None:intergenic | 30.0% | |
| AAATTAAATGAGCACAAGAG+TGG | + | chr6_3:43616074-43616093 | Msa0951730:intron | 30.0% | |
| AAGTGATTACATACAAGTAC+TGG | + | chr6_3:43616165-43616184 | Msa0951730:intron | 30.0% | |
| TAAGAAAGAGTAACTAACCA+TGG | + | chr6_3:43616193-43616212 | Msa0951730:intron | 30.0% | |
| AAACATAGGGAAATGTTAAC+CGG | + | chr6_3:43616308-43616327 | Msa0951730:intron | 30.0% | |
| CAATTCCTGAAAAGTCAAAA+AGG | + | chr6_3:43616393-43616412 | Msa0951730:intron | 30.0% | |
| !!! | TAACACCTTTTTGACTTTTC+AGG | - | chr6_3:43616401-43616420 | None:intergenic | 30.0% |
| GGACCCATAAACATATATAT+CGG | + | chr6_3:43616484-43616503 | Msa0951730:intron | 30.0% | |
| GGTCCGATATATATGTTTAT+GGG | - | chr6_3:43616490-43616509 | None:intergenic | 30.0% | |
| TGGTCCGATATATATGTTTA+TGG | - | chr6_3:43616491-43616510 | None:intergenic | 30.0% | |
| !! | GTATATCACTTTTAGAAGAC+CGG | - | chr6_3:43616526-43616545 | None:intergenic | 30.0% |
| ATAGTTGTCAGACTTTCTTT+CGG | + | chr6_3:43616929-43616948 | Msa0951730:intron | 30.0% | |
| ! | CTTTGGAGAAAATCATTGTA+TGG | - | chr6_3:43617020-43617039 | None:intergenic | 30.0% |
| ! | CATACAATGATTTTCTCCAA+AGG | + | chr6_3:43617018-43617037 | Msa0951730:intron | 30.0% |
| ATCCATATCATATCTTCCTT+TGG | - | chr6_3:43617037-43617056 | None:intergenic | 30.0% | |
| AAGATATGATATGGATGACT+TGG | + | chr6_3:43617041-43617060 | Msa0951730:intron | 30.0% | |
| ATCTACATATATCAACCGTT+GGG | - | chr6_3:43617077-43617096 | None:intergenic | 30.0% | |
| AATCTACATATATCAACCGT+TGG | - | chr6_3:43617078-43617097 | None:intergenic | 30.0% | |
| GTAAAAAATGCTTTCCTACA+CGG | - | chr6_3:43617116-43617135 | None:intergenic | 30.0% | |
| ATATTCGCCAATTTAACAAG+CGG | + | chr6_3:43617191-43617210 | Msa0951730:intron | 30.0% | |
| AATATGACGTTTCATTTGAG+AGG | - | chr6_3:43617286-43617305 | None:intergenic | 30.0% | |
| ATTCGTAAGAATCCATTGTA+AGG | - | chr6_3:43617390-43617409 | None:intergenic | 30.0% | |
| TCTTACGAATGAACATAACA+AGG | + | chr6_3:43617400-43617419 | Msa0951730:intron | 30.0% | |
| CTTACGAATGAACATAACAA+GGG | + | chr6_3:43617401-43617420 | Msa0951730:intron | 30.0% | |
| ATAAATAGAGACATTGTGTG+TGG | - | chr6_3:43617638-43617657 | None:intergenic | 30.0% | |
| !! | TCTCCATGTCATTTGTTATT+GGG | + | chr6_3:43617674-43617693 | Msa0951730:intron | 30.0% |
| AAACCCAATAACAAATGACA+TGG | - | chr6_3:43617680-43617699 | None:intergenic | 30.0% | |
| CACAAATCCAATAACTCATT+TGG | + | chr6_3:43617701-43617720 | Msa0951730:intron | 30.0% | |
| CAAAGACTTAAATCTACACA+TGG | - | chr6_3:43617753-43617772 | None:intergenic | 30.0% | |
| TCACAAGACACATATGAAAA+TGG | - | chr6_3:43618239-43618258 | None:intergenic | 30.0% | |
| ! | ATCGTATCACTATTTTCCTT+TGG | + | chr6_3:43618322-43618341 | Msa0951730:intron | 30.0% |
| !!! | TTCATTTTTGGTCTGAATCA+TGG | + | chr6_3:43618422-43618441 | Msa0951730:intron | 30.0% |
| !! | TAAGTGGTTTGGTTGTAATA+AGG | - | chr6_3:43618576-43618595 | None:intergenic | 30.0% |
| ATGCAAATGATTAAGTGGTT+TGG | - | chr6_3:43618587-43618606 | None:intergenic | 30.0% | |
| ATAGATTGCTAGAGTTCTAT+AGG | + | chr6_3:43618678-43618697 | Msa0951730:intron | 30.0% | |
| TAGATTGCTAGAGTTCTATA+GGG | + | chr6_3:43618679-43618698 | Msa0951730:intron | 30.0% | |
| !! | TTGTAAGTTGATTGCTTTCA+AGG | + | chr6_3:43618703-43618722 | Msa0951730:intron | 30.0% |
| TTGCTTTCAAGGATATTGAT+TGG | + | chr6_3:43618714-43618733 | Msa0951730:intron | 30.0% | |
| ! | TGCTTTCAAGGATATTGATT+GGG | + | chr6_3:43618715-43618734 | Msa0951730:intron | 30.0% |
| !! | TCAAGAAGTACCAATTTCAA+AGG | + | chr6_3:43618903-43618922 | Msa0951730:intron | 30.0% |
| !! | CAAGAAGTACCAATTTCAAA+GGG | + | chr6_3:43618904-43618923 | Msa0951730:intron | 30.0% |
| !! | CTTCAAATACCCTTTGAAAT+TGG | - | chr6_3:43618916-43618935 | None:intergenic | 30.0% |
| !! | TTCAAAGGGTATTTGAAGAT+TGG | + | chr6_3:43618918-43618937 | Msa0951730:intron | 30.0% |
| !! | TCAAAGGGTATTTGAAGATT+GGG | + | chr6_3:43618919-43618938 | Msa0951730:intron | 30.0% |
| TGCATAGGAATTAAACAACT+AGG | + | chr6_3:43618949-43618968 | Msa0951730:intron | 30.0% | |
| GCATAGGAATTAAACAACTA+GGG | + | chr6_3:43618950-43618969 | Msa0951730:intron | 30.0% | |
| TGGGGAACTACTATAAATAT+CGG | + | chr6_3:43619085-43619104 | Msa0951730:intron | 30.0% | |
| GTTATCATCAAAACTTAAGG+TGG | - | chr6_3:43619179-43619198 | None:intergenic | 30.0% | |
| TGCTAATATTTGTTCAAGTG+TGG | + | chr6_3:43619254-43619273 | Msa0951730:intron | 30.0% | |
| TAATATTTGTTCAAGTGTGG+AGG | + | chr6_3:43619257-43619276 | Msa0951730:intron | 30.0% | |
| TAAGTCTCTAAACAAAGCAT+TGG | + | chr6_3:43619298-43619317 | Msa0951730:intron | 30.0% | |
| GAGAGCAAAGAAATTTACAA+AGG | + | chr6_3:43619337-43619356 | Msa0951730:intron | 30.0% | |
| TCTAATGAACTTCAGACTTT+GGG | - | chr6_3:43619443-43619462 | None:intergenic | 30.0% | |
| TTCTAATGAACTTCAGACTT+TGG | - | chr6_3:43619444-43619463 | None:intergenic | 30.0% | |
| !! | TTCTAGAATGAATAAAAGCC+TGG | + | chr6_3:43619516-43619535 | Msa0951730:intron | 30.0% |
| GTCTTATAATTCCTCTATAG+TGG | - | chr6_3:43619550-43619569 | None:intergenic | 30.0% | |
| ! | TTTGAAATTCGTTCCTTGTA+TGG | - | chr6_3:43619693-43619712 | None:intergenic | 30.0% |
| ATTTGGTTAATGTCCTAAGA+AGG | - | chr6_3:43619721-43619740 | None:intergenic | 30.0% | |
| GTCTTCATTCCTTTATATAG+AGG | - | chr6_3:43619824-43619843 | None:intergenic | 30.0% | |
| TGAACATTTGTAACCAGAAT+TGG | + | chr6_3:43620133-43620152 | Msa0951730:intron | 30.0% | |
| ATTTCACTCTAATCCAATTC+TGG | - | chr6_3:43620149-43620168 | None:intergenic | 30.0% | |
| !!! | ACTTGACTACTTTTTGATTG+TGG | + | chr6_3:43620190-43620209 | Msa0951730:intron | 30.0% |
| AGATAAAGAAAAGTGAGAGA+GGG | - | chr6_3:43620251-43620270 | None:intergenic | 30.0% | |
| CTCTAGACTTTGAATTTACA+AGG | + | chr6_3:43620303-43620322 | Msa0951730:intron | 30.0% | |
| AAACCTTAACATATACTCTC+AGG | + | chr6_3:43620464-43620483 | Msa0951730:intron | 30.0% | |
| !! | TAGCTCGTTTTTATGGATTA+AGG | - | chr6_3:43620533-43620552 | None:intergenic | 30.0% |
| ATCACTACTCACTAGTAATA+GGG | - | chr6_3:43620718-43620737 | None:intergenic | 30.0% | |
| TATCACTACTCACTAGTAAT+AGG | - | chr6_3:43620719-43620738 | None:intergenic | 30.0% | |
| AGTGGTTAGTAGCAATATAT+TGG | + | chr6_3:43620738-43620757 | Msa0951730:intron | 30.0% | |
| ! | TATTAGCTTCTTGTTGCATT+AGG | - | chr6_3:43620809-43620828 | None:intergenic | 30.0% |
| TCATAACAAACAATTGTAGC+TGG | + | chr6_3:43620837-43620856 | Msa0951730:intron | 30.0% | |
| TAAGATAAGTCATTGCTTGA+TGG | - | chr6_3:43620873-43620892 | None:intergenic | 30.0% | |
| TGAATAGAAATGCACGTTAA+TGG | - | chr6_3:43620960-43620979 | None:intergenic | 30.0% | |
| !!! | TCCCACAAGTTTTTTCAAAA+TGG | + | chr6_3:43621173-43621192 | Msa0951730:intron | 30.0% |
| GTTTCCGTGAAAAGAAAAAT+TGG | - | chr6_3:43621297-43621316 | None:intergenic | 30.0% | |
| !!! | TCGATTTTGATTGCGATTTT+AGG | - | chr6_3:43621637-43621656 | None:intergenic | 30.0% |
| AAAATCGCAATCAAAATCGA+TGG | + | chr6_3:43621637-43621656 | Msa0951730:intron | 30.0% | |
| ACAAGATCTTTATATGATGC+AGG | - | chr6_3:43615021-43615040 | None:intergenic | 30.0% | |
| ! | CAAAAGTTAGTATTTTTCCC+AGG | - | chr6_3:43615051-43615070 | None:intergenic | 30.0% |
| CACAAACCATAATCAACATT+AGG | - | chr6_3:43621980-43621999 | None:intergenic | 30.0% | |
| AGAAGCAAATCGTTGTTATC+TGG | + | chr6_3:43614930-43614949 | Msa0951730:CDS | 35.0% | |
| GATCTTTATATGATGCAGGT+TGG | - | chr6_3:43615017-43615036 | None:intergenic | 35.0% | |
| AAAGATCTTGTGAAGATACC+TGG | + | chr6_3:43615030-43615049 | Msa0951730:CDS | 35.0% | |
| AAGATCTTGTGAAGATACCT+GGG | + | chr6_3:43615031-43615050 | Msa0951730:CDS | 35.0% | |
| ! | TAACTTTTGTCAGTCTCATG+TGG | + | chr6_3:43615062-43615081 | Msa0951730:CDS | 35.0% |
| CACAAACCATAATCGACATT+AGG | - | chr6_3:43615135-43615154 | None:intergenic | 35.0% | |
| !!! | TTTTGGGACTGTAGATTTAG+AGG | - | chr6_3:43615199-43615218 | None:intergenic | 35.0% |
| ATATCAAGCTATCTCAAGCA+TGG | - | chr6_3:43615232-43615251 | None:intergenic | 35.0% | |
| GTAGATGATGCATCATATCA+AGG | - | chr6_3:43615278-43615297 | None:intergenic | 35.0% | |
| AGAGTCACACCAATATTACT+AGG | - | chr6_3:43615401-43615420 | None:intergenic | 35.0% | |
| ! | GCCTTGTATTTATGCAGTTT+TGG | + | chr6_3:43615565-43615584 | Msa0951730:intron | 35.0% |
| GCCAAAACTGCATAAATACA+AGG | - | chr6_3:43615569-43615588 | None:intergenic | 35.0% | |
| !!! | TGTTTAGCTTTTATGAGCCA+TGG | - | chr6_3:43616213-43616232 | None:intergenic | 35.0% |
| CTGGTTAAGGAATCCAAAAA+AGG | - | chr6_3:43616441-43616460 | None:intergenic | 35.0% | |
| AAGACCGGATATTTCATTTG+TGG | - | chr6_3:43616511-43616530 | None:intergenic | 35.0% | |
| AGTTTCGATTTCATGTCAAC+TGG | + | chr6_3:43616612-43616631 | Msa0951730:intron | 35.0% | |
| GTTTCGATTTCATGTCAACT+GGG | + | chr6_3:43616613-43616632 | Msa0951730:intron | 35.0% | |
| TTTCGATTTCATGTCAACTG+GGG | + | chr6_3:43616614-43616633 | Msa0951730:intron | 35.0% | |
| AGAAGTGGTAAGAATGATGT+CGG | + | chr6_3:43616854-43616873 | Msa0951730:intron | 35.0% | |
| AATCGTTTGTATCATGCTCT+AGG | + | chr6_3:43616981-43617000 | Msa0951730:intron | 35.0% | |
| CTCCAAAGGAAGATATGATA+TGG | + | chr6_3:43617032-43617051 | Msa0951730:intron | 35.0% | |
| TCTACATATATCAACCGTTG+GGG | - | chr6_3:43617076-43617095 | None:intergenic | 35.0% | |
| TATTCGCCAATTTAACAAGC+GGG | + | chr6_3:43617192-43617211 | Msa0951730:intron | 35.0% | |
| CAACAATACTGAACTACAAG+AGG | - | chr6_3:43617438-43617457 | None:intergenic | 35.0% | |
| AGGATTAGAGAGAAAAGAGA+GGG | + | chr6_3:43617565-43617584 | Msa0951730:intron | 35.0% | |
| !! | CTCTCCATGTCATTTGTTAT+TGG | + | chr6_3:43617673-43617692 | Msa0951730:intron | 35.0% |
| TCTAGACACAAGGAATCAAT+AGG | - | chr6_3:43618127-43618146 | None:intergenic | 35.0% | |
| TTGATTCCTTGTGTCTAGAT+TGG | + | chr6_3:43618128-43618147 | Msa0951730:intron | 35.0% | |
| TGTATACCAATCTAGACACA+AGG | - | chr6_3:43618137-43618156 | None:intergenic | 35.0% | |
| ! | GTAGAAATGTCCTTTTCTCT+TGG | + | chr6_3:43618160-43618179 | Msa0951730:intron | 35.0% |
| CATATGTGTCTTGTGAAACT+TGG | + | chr6_3:43618243-43618262 | Msa0951730:intron | 35.0% | |
| !! | TTTCCTTTGGACTTGTTTTC+TGG | + | chr6_3:43618335-43618354 | Msa0951730:intron | 35.0% |
| ! | AGGGTGACAAAGCAATATTT+TGG | - | chr6_3:43618534-43618553 | None:intergenic | 35.0% |
| TCTAGCAATCTATGACTCAA+AGG | - | chr6_3:43618671-43618690 | None:intergenic | 35.0% | |
| ! | AGGATATTGATTGGGAATCA+AGG | + | chr6_3:43618723-43618742 | Msa0951730:intron | 35.0% |
| AGAAAGAACCCTAATACCTT+TGG | - | chr6_3:43618782-43618801 | None:intergenic | 35.0% | |
| AAGGATTGCATGAGTGTTTA+AGG | + | chr6_3:43618869-43618888 | Msa0951730:intron | 35.0% | |
| !! | CAAAGGGTATTTGAAGATTG+GGG | + | chr6_3:43618920-43618939 | Msa0951730:intron | 35.0% |
| AAACAACTAGGGTAGTTTCA+AGG | + | chr6_3:43618961-43618980 | Msa0951730:intron | 35.0% | |
| GGACTTCCACTAAAATTGAA+TGG | - | chr6_3:43619009-43619028 | None:intergenic | 35.0% | |
| !! | TCAATTTTAGTGGAAGTCCT+TGG | + | chr6_3:43619010-43619029 | Msa0951730:intron | 35.0% |
| AAACGAAGTCAAAGAGGAAA+TGG | - | chr6_3:43619124-43619143 | None:intergenic | 35.0% | |
| TTTGAGGGAAGATGATAACA+AGG | + | chr6_3:43619210-43619229 | Msa0951730:intron | 35.0% | |
| !! | TCTAAACAAAGCATTGGTTC+TGG | + | chr6_3:43619304-43619323 | Msa0951730:intron | 35.0% |
| ! | CAATGATCTGTTGCTTGATT+TGG | - | chr6_3:43619738-43619757 | None:intergenic | 35.0% |
| CAAATCAAGCAACAGATCAT+TGG | + | chr6_3:43619736-43619755 | Msa0951730:intron | 35.0% | |
| TGAAGACTTGAAGTTCAGTA+AGG | + | chr6_3:43619837-43619856 | Msa0951730:intron | 35.0% | |
| ! | CAACAATTTCAGCAGAGTTT+TGG | - | chr6_3:43619885-43619904 | None:intergenic | 35.0% |
| ! | ACACCACTGATTGTATATCA+AGG | + | chr6_3:43619990-43620009 | Msa0951730:intron | 35.0% |
| ! | CACCACTGATTGTATATCAA+GGG | + | chr6_3:43619991-43620010 | Msa0951730:intron | 35.0% |
| AACCCTTGATATACAATCAG+TGG | - | chr6_3:43619996-43620015 | None:intergenic | 35.0% | |
| !! | TTGCTTTTGTGCTTGAACAT+AGG | + | chr6_3:43620060-43620079 | Msa0951730:intron | 35.0% |
| !!! | GACTACTTTTTGATTGTGGA+AGG | + | chr6_3:43620194-43620213 | Msa0951730:intron | 35.0% |
| ATAAAGAAAAGTGAGAGAGG+GGG | - | chr6_3:43620249-43620268 | None:intergenic | 35.0% | |
| GATAAAGAAAAGTGAGAGAG+GGG | - | chr6_3:43620250-43620269 | None:intergenic | 35.0% | |
| CAGATAAAGAAAAGTGAGAG+AGG | - | chr6_3:43620252-43620271 | None:intergenic | 35.0% | |
| ! | TGTCCTGAGAGTATATGTTA+AGG | - | chr6_3:43620470-43620489 | None:intergenic | 35.0% |
| TTACTAGTGAGTAGTGATAG+TGG | + | chr6_3:43620720-43620739 | Msa0951730:intron | 35.0% | |
| CACGTTAATGGTGATAAAGA+TGG | - | chr6_3:43620948-43620967 | None:intergenic | 35.0% | |
| ! | TTATAATAGATCTAGGACGG+TGG | - | chr6_3:43621235-43621254 | None:intergenic | 35.0% |
| TTTCCTTAGCTAATGTCTCA+GGG | - | chr6_3:43621433-43621452 | None:intergenic | 35.0% | |
| !!! | TTGCTTCTACTTTTTCCATC+GGG | - | chr6_3:43621742-43621761 | None:intergenic | 35.0% |
| !!! | CTTGCTTCTACTTTTTCCAT+CGG | - | chr6_3:43621743-43621762 | None:intergenic | 35.0% |
| GATCTTTATATGATGCAGGT+TGG | - | chr6_3:43615017-43615036 | None:intergenic | 35.0% | |
| AAAGATCTTGTGAAGATACC+TGG | + | chr6_3:43615030-43615049 | Msa0951730:CDS | 35.0% | |
| AAGATCTTGTGAAGATACCT+GGG | + | chr6_3:43615031-43615050 | Msa0951730:CDS | 35.0% | |
| ! | TAACTTTTGTCAGTCTCATG+TGG | + | chr6_3:43615062-43615081 | Msa0951730:CDS | 35.0% |
| CCATAATCAACATTAGGACT+AGG | - | chr6_3:43621974-43621993 | None:intergenic | 35.0% | |
| ! | CCTAGTCCTAATGTTGATTA+TGG | + | chr6_3:43621971-43621990 | Msa0951730:CDS | 35.0% |
| !!! | TTTTGGGACTGTAGATTTAG+AGG | - | chr6_3:43615199-43615218 | None:intergenic | 35.0% |
| ! | GCATCTTCAAGAAGTCTTTT+GGG | - | chr6_3:43622060-43622079 | None:intergenic | 35.0% |
| ! | AGCATCTTCAAGAAGTCTTT+TGG | - | chr6_3:43622061-43622080 | None:intergenic | 35.0% |
| TCATGTGGAATGCAAAGAGA+AGG | + | chr6_3:43615077-43615096 | Msa0951730:CDS | 40.0% | |
| CATGTGGAATGCAAAGAGAA+GGG | + | chr6_3:43615078-43615097 | Msa0951730:CDS | 40.0% | |
| ATCTTCTGCCTCAGATAAAG+AGG | - | chr6_3:43615163-43615182 | None:intergenic | 40.0% | |
| ! | GCATGGTCAAGAAGTCTTTT+GGG | - | chr6_3:43615215-43615234 | None:intergenic | 40.0% |
| ! | AGCATGGTCAAGAAGTCTTT+TGG | - | chr6_3:43615216-43615235 | None:intergenic | 40.0% |
| AGGAAATCCAACTCATCGAT+TGG | - | chr6_3:43615323-43615342 | None:intergenic | 40.0% | |
| TTGACGCAGTACATAAGTGT+TGG | + | chr6_3:43615751-43615770 | Msa0951730:intron | 40.0% | |
| !!! | CTCAATTTTCTGGTGGATTC+CGG | - | chr6_3:43615845-43615864 | None:intergenic | 40.0% |
| AGCATCTTGTGTTACATCGA+AGG | - | chr6_3:43616246-43616265 | None:intergenic | 40.0% | |
| TTCAATGGAAGTTCACATGC+AGG | - | chr6_3:43616276-43616295 | None:intergenic | 40.0% | |
| TGTTTATGGGTCCTGTTAAC+CGG | - | chr6_3:43616477-43616496 | None:intergenic | 40.0% | |
| CGGACCACAAATGAAATATC+CGG | + | chr6_3:43616504-43616523 | Msa0951730:intron | 40.0% | |
| TCGAAACTTAGCACCACAAT+CGG | - | chr6_3:43616600-43616619 | None:intergenic | 40.0% | |
| GACATGACTTCATGTCAACT+GGG | + | chr6_3:43616640-43616659 | Msa0951730:intron | 40.0% | |
| ACATGACTTCATGTCAACTG+GGG | + | chr6_3:43616641-43616660 | Msa0951730:intron | 40.0% | |
| AAGACATACCAACACGTTCA+AGG | + | chr6_3:43616682-43616701 | Msa0951730:intron | 40.0% | |
| ATGCCCAGATAATAAGTGAG+TGG | + | chr6_3:43616765-43616784 | Msa0951730:intron | 40.0% | |
| GGACCACTCACTTATTATCT+GGG | - | chr6_3:43616771-43616790 | None:intergenic | 40.0% | |
| CCTGATTACGTTTCATCGAT+TGG | - | chr6_3:43616960-43616979 | None:intergenic | 40.0% | |
| CCAATCGATGAAACGTAATC+AGG | + | chr6_3:43616957-43616976 | Msa0951730:intron | 40.0% | |
| ! | TTTCTTTGAGTTCACCGTGT+AGG | + | chr6_3:43617099-43617118 | Msa0951730:intron | 40.0% |
| CTCTTGCTCTCTCAAAAGAA+TGG | - | chr6_3:43617157-43617176 | None:intergenic | 40.0% | |
| ! | ATTCGACCCGCTTGTTAAAT+TGG | - | chr6_3:43617201-43617220 | None:intergenic | 40.0% |
| AATTTAACAAGCGGGTCGAA+TGG | + | chr6_3:43617200-43617219 | Msa0951730:intron | 40.0% | |
| CAACATGTTGGTGTGTATTG+TGG | - | chr6_3:43617230-43617249 | None:intergenic | 40.0% | |
| ! | AAAGCTCGATTTGTAGGAGA+TGG | - | chr6_3:43617260-43617279 | None:intergenic | 40.0% |
| ! | AGGCATAAAGCTCGATTTGT+AGG | - | chr6_3:43617266-43617285 | None:intergenic | 40.0% |
| GAGGATTAGAGAGAAAAGAG+AGG | + | chr6_3:43617564-43617583 | Msa0951730:intron | 40.0% | |
| GGATTAGAGAGAAAAGAGAG+GGG | + | chr6_3:43617566-43617585 | Msa0951730:intron | 40.0% | |
| !! | ATTTCCTCTGGTGCCAATTT+TGG | + | chr6_3:43617966-43617985 | Msa0951730:intron | 40.0% |
| ATGGACTTGCCTACCAAAAT+TGG | - | chr6_3:43617982-43618001 | None:intergenic | 40.0% | |
| !! | AGCTTTGCTCTGGCTTTAAA+TGG | + | chr6_3:43618006-43618025 | Msa0951730:intron | 40.0% |
| !! | GCTTTGCTCTGGCTTTAAAT+GGG | + | chr6_3:43618007-43618026 | Msa0951730:intron | 40.0% |
| !! | CTTTGCTCTGGCTTTAAATG+GGG | + | chr6_3:43618008-43618027 | Msa0951730:intron | 40.0% |
| ATTGATCCCCTCAGATTAGT+CGG | + | chr6_3:43618051-43618070 | Msa0951730:intron | 40.0% | |
| GAATCAATAGGACACATGAG+AGG | - | chr6_3:43618115-43618134 | None:intergenic | 40.0% | |
| CAAAGGTTTGCCAAGAGAAA+AGG | - | chr6_3:43618173-43618192 | None:intergenic | 40.0% | |
| AAGCCAGAAAACAAGTCCAA+AGG | - | chr6_3:43618341-43618360 | None:intergenic | 40.0% | |
| !! | GGCTTGTTGAATCGATTCAT+AGG | + | chr6_3:43618356-43618375 | Msa0951730:intron | 40.0% |
| ATAAAAGGGTGACAAAGCAG+TGG | - | chr6_3:43618633-43618652 | None:intergenic | 40.0% | |
| TAATTCCATTCCACCTCCAA+AGG | + | chr6_3:43618763-43618782 | Msa0951730:intron | 40.0% | |
| ! | TAATACCTTTGGAGGTGGAA+TGG | - | chr6_3:43618771-43618790 | None:intergenic | 40.0% |
| !! | ATTCCACCTCCAAAGGTATT+AGG | + | chr6_3:43618770-43618789 | Msa0951730:intron | 40.0% |
| !! | TTCCACCTCCAAAGGTATTA+GGG | + | chr6_3:43618771-43618790 | Msa0951730:intron | 40.0% |
| AAGAACCCTAATACCTTTGG+AGG | - | chr6_3:43618779-43618798 | None:intergenic | 40.0% | |
| !! | ATTTTAGTGGAAGTCCTTGG+TGG | + | chr6_3:43619013-43619032 | Msa0951730:intron | 40.0% |
| GGTACATCTACTCTTCTTGA+TGG | - | chr6_3:43619048-43619067 | None:intergenic | 40.0% | |
| GATGCTTATCCACTGAAGAA+TGG | + | chr6_3:43619574-43619593 | Msa0951730:intron | 40.0% | |
| TTTCTCTGTCCATTCTTCAG+TGG | - | chr6_3:43619586-43619605 | None:intergenic | 40.0% | |
| ACTGAAGAATGGACAGAGAA+AGG | + | chr6_3:43619585-43619604 | Msa0951730:intron | 40.0% | |
| TACTACATATGTGTCTCTGC+TGG | + | chr6_3:43619659-43619678 | Msa0951730:intron | 40.0% | |
| GCTGGTTAATTCTCCATACA+AGG | + | chr6_3:43619677-43619696 | Msa0951730:intron | 40.0% | |
| GGATTAGAGTGAAATCTCCT+TGG | + | chr6_3:43620154-43620173 | Msa0951730:intron | 40.0% | |
| ! | AAATCTCCTTGGAAGTGCAA+GGG | + | chr6_3:43620165-43620184 | Msa0951730:intron | 40.0% |
| !! | GCTCGTTTAGCTCGTTTTTA+TGG | - | chr6_3:43620540-43620559 | None:intergenic | 40.0% |
| TACATTAATAATGGCTGGGG+TGG | - | chr6_3:43620598-43620617 | None:intergenic | 40.0% | |
| !! | TGCTATTTCGTCTTATAGCG+TGG | - | chr6_3:43620690-43620709 | None:intergenic | 40.0% |
| ACTACTCACTAGTAATAGGG+AGG | - | chr6_3:43620715-43620734 | None:intergenic | 40.0% | |
| AATATATTGGCGCTAGTACG+AGG | + | chr6_3:43620751-43620770 | Msa0951730:intron | 40.0% | |
| TCTTAAGCTCACTCCTTTAG+CGG | + | chr6_3:43620888-43620907 | Msa0951730:intron | 40.0% | |
| AATAGAAAGAGGAGAGAGAG+CGG | - | chr6_3:43621117-43621136 | None:intergenic | 40.0% | |
| GTTTCCTTAGCTAATGTCTC+AGG | - | chr6_3:43621434-43621453 | None:intergenic | 40.0% | |
| AGAAGCAAGCCGTTGTTATA+TGG | + | chr6_3:43621754-43621773 | Msa0951730:intron | 40.0% | |
| TCATGTGGAATGCAAAGAGA+AGG | + | chr6_3:43615077-43615096 | Msa0951730:CDS | 40.0% | |
| CATGTGGAATGCAAAGAGAA+GGG | + | chr6_3:43615078-43615097 | Msa0951730:CDS | 40.0% | |
| ATCTTCTGCCTCAGATAAAG+AGG | - | chr6_3:43615163-43615182 | None:intergenic | 40.0% | |
| CTTCTTGAAGATGCTTGAGA+TGG | + | chr6_3:43622066-43622085 | Msa0951730:CDS | 40.0% | |
| GGCGTAGGTTGTGTTTGTTT+CGG | + | chr6_3:43614982-43615001 | Msa0951730:CDS | 45.0% | |
| AATGCAAAGAGAAGGGACGT+GGG | + | chr6_3:43615085-43615104 | Msa0951730:CDS | 45.0% | |
| CCATAATCGACATTAGGGCT+AGG | - | chr6_3:43615129-43615148 | None:intergenic | 45.0% | |
| ! | CCTAGCCCTAATGTCGATTA+TGG | + | chr6_3:43615126-43615145 | Msa0951730:CDS | 45.0% |
| GTGTGTTGCCTCTTTATCTG+AGG | + | chr6_3:43615152-43615171 | Msa0951730:intron | 45.0% | |
| CTGATGCATGTAAATGGGTG+TGG | + | chr6_3:43615351-43615370 | Msa0951730:intron | 45.0% | |
| !! | CATAAGTGTTGGCTAGCAAG+CGG | + | chr6_3:43615762-43615781 | Msa0951730:intron | 45.0% |
| TACTTCCTTAACCAGTGCTC+CGG | - | chr6_3:43616339-43616358 | None:intergenic | 45.0% | |
| CACAATCGGCACTCAATATG+TGG | - | chr6_3:43616586-43616605 | None:intergenic | 45.0% | |
| !! | CACATATTGAGTGCCGATTG+TGG | + | chr6_3:43616584-43616603 | Msa0951730:intron | 45.0% |
| GATTTCATGTCAACTGGGGT+AGG | + | chr6_3:43616618-43616637 | Msa0951730:intron | 45.0% | |
| GGACATGACTTCATGTCAAC+TGG | + | chr6_3:43616639-43616658 | Msa0951730:intron | 45.0% | |
| GTATAGGTCCTTGAACGTGT+TGG | - | chr6_3:43616693-43616712 | None:intergenic | 45.0% | |
| GGGACCACTCACTTATTATC+TGG | - | chr6_3:43616772-43616791 | None:intergenic | 45.0% | |
| ! | GTGTAGAGCATCAGTAGAAG+TGG | + | chr6_3:43616839-43616858 | Msa0951730:intron | 45.0% |
| ATATCAACCGTTGGGGTTCA+AGG | - | chr6_3:43617069-43617088 | None:intergenic | 45.0% | |
| TGAGAGAGCAAGAGTGAGAA+CGG | + | chr6_3:43617163-43617182 | Msa0951730:intron | 45.0% | |
| CATGTTGGTGTGTATTGTGG+AGG | - | chr6_3:43617227-43617246 | None:intergenic | 45.0% | |
| GATGGTGTAGGTCAACATGT+TGG | - | chr6_3:43617242-43617261 | None:intergenic | 45.0% | |
| CGATTTGTAGGAGATGGTGT+AGG | - | chr6_3:43617254-43617273 | None:intergenic | 45.0% | |
| GATCACAAACGCCACTCAAA+TGG | + | chr6_3:43617477-43617496 | Msa0951730:intron | 45.0% | |
| !! | TAGAGGTGTTGCCATTTGAG+TGG | - | chr6_3:43617491-43617510 | None:intergenic | 45.0% |
| ! | TGTTCGTGTGGATTGAGTAG+AGG | - | chr6_3:43617508-43617527 | None:intergenic | 45.0% |
| !! | TGCTAGCTGACTCGAAATAG+AGG | + | chr6_3:43617545-43617564 | Msa0951730:intron | 45.0% |
| TTAGAGAGAAAAGAGAGGGG+CGG | + | chr6_3:43617569-43617588 | Msa0951730:intron | 45.0% | |
| TTCACGAGAGGACAATTGCT+AGG | - | chr6_3:43617874-43617893 | None:intergenic | 45.0% | |
| TCCTCTCGTGAACACATTTG+AGG | + | chr6_3:43617882-43617901 | Msa0951730:intron | 45.0% | |
| ACCTCAAATGTGTTCACGAG+AGG | - | chr6_3:43617886-43617905 | None:intergenic | 45.0% | |
| ! | CTCGTGAACACATTTGAGGT+TGG | + | chr6_3:43617886-43617905 | Msa0951730:intron | 45.0% |
| !! | GTTGGCCAAGTGGTTTGTTT+GGG | + | chr6_3:43617904-43617923 | Msa0951730:intron | 45.0% |
| AGGATCCCAAACAAACCACT+TGG | - | chr6_3:43617912-43617931 | None:intergenic | 45.0% | |
| !! | AAGTGGTTTGTTTGGGATCC+TGG | + | chr6_3:43617911-43617930 | Msa0951730:intron | 45.0% |
| ! | GTCCATACATAGCTTTGCTC+TGG | + | chr6_3:43617996-43618015 | Msa0951730:intron | 45.0% |
| AGCCAGAGCAAAGCTATGTA+TGG | - | chr6_3:43618001-43618020 | None:intergenic | 45.0% | |
| CAATGACCGACTAATCTGAG+GGG | - | chr6_3:43618060-43618079 | None:intergenic | 45.0% | |
| CCAATGACCGACTAATCTGA+GGG | - | chr6_3:43618061-43618080 | None:intergenic | 45.0% | |
| TCCAATGACCGACTAATCTG+AGG | - | chr6_3:43618062-43618081 | None:intergenic | 45.0% | |
| ! | AACCCTAATACCTTTGGAGG+TGG | - | chr6_3:43618776-43618795 | None:intergenic | 45.0% |
| CTCTTCTTTGCTACGTACGA+TGG | - | chr6_3:43618832-43618851 | None:intergenic | 45.0% | |
| AGTTCGAGTGAAGAGCTTCA+AGG | + | chr6_3:43618850-43618869 | Msa0951730:intron | 45.0% | |
| AGATTGGGGAGTAGTTGCAT+AGG | + | chr6_3:43618934-43618953 | Msa0951730:intron | 45.0% | |
| GATGGAAAACATCTCCACCA+AGG | - | chr6_3:43619030-43619049 | None:intergenic | 45.0% | |
| CTTTGGGTGACTTTAGACTC+TGG | - | chr6_3:43619427-43619446 | None:intergenic | 45.0% | |
| AGACATGAGTGAAGTAGTGG+TGG | - | chr6_3:43619628-43619647 | None:intergenic | 45.0% | |
| CACAGACATGAGTGAAGTAG+TGG | - | chr6_3:43619631-43619650 | None:intergenic | 45.0% | |
| ! | GAAATCTCCTTGGAAGTGCA+AGG | + | chr6_3:43620164-43620183 | Msa0951730:intron | 45.0% |
| ! | AATCTCCTTGGAAGTGCAAG+GGG | + | chr6_3:43620166-43620185 | Msa0951730:intron | 45.0% |
| ATAGAAAGAGGAGAGAGAGC+GGG | - | chr6_3:43621116-43621135 | None:intergenic | 45.0% | |
| ATTTGCAGTCATTCTCCCGA+TGG | + | chr6_3:43621724-43621743 | Msa0951730:intron | 45.0% | |
| AATGCAAAGAGAAGGGACGT+GGG | + | chr6_3:43615085-43615104 | Msa0951730:CDS | 45.0% | |
| GTGTGTTGCCTCTTTATCTG+AGG | + | chr6_3:43615152-43615171 | Msa0951730:intron | 45.0% | |
| !! | TAATATAATTACATTAATAA+TGG | - | chr6_3:43620607-43620626 | None:intergenic | 5.0% |
| !!! | AATATTTTTTAAATAACTTT+TGG | + | chr6_3:43621023-43621042 | Msa0951730:intron | 5.0% |
| !! | TATTATTAAATTGTTAAATT+TGG | - | chr6_3:43621346-43621365 | None:intergenic | 5.0% |
| TCAGACACATCCCGAACATG+CGG | + | chr6_3:43614961-43614980 | Msa0951730:CDS | 50.0% | |
| GAATGCAAAGAGAAGGGACG+TGG | + | chr6_3:43615084-43615103 | Msa0951730:CDS | 50.0% | |
| !! | GATTGGCTTCACGCCTAACA+TGG | - | chr6_3:43615478-43615497 | None:intergenic | 50.0% |
| ACTTCCTTAACCAGTGCTCC+GGG | - | chr6_3:43616338-43616357 | None:intergenic | 50.0% | |
| GACTTCATGTCAACTGGGGT+AGG | + | chr6_3:43616645-43616664 | Msa0951730:intron | 50.0% | |
| !! | ATGCTCTAGGAGTTCGCTTG+AGG | + | chr6_3:43616994-43617013 | Msa0951730:intron | 50.0% |
| CTTGGATCCTTGAACCCCAA+CGG | + | chr6_3:43617059-43617078 | Msa0951730:intron | 50.0% | |
| AGTGGAGGAAACTGTTCGTG+TGG | - | chr6_3:43617520-43617539 | None:intergenic | 50.0% | |
| TCAGCTAGCATTGTGAGTGG+AGG | - | chr6_3:43617535-43617554 | None:intergenic | 50.0% | |
| GAGTCAGCTAGCATTGTGAG+TGG | - | chr6_3:43617538-43617557 | None:intergenic | 50.0% | |
| AGAAAAGAGAGGGGCGGTTA+AGG | + | chr6_3:43617575-43617594 | Msa0951730:intron | 50.0% | |
| ! | CACATTTGAGGTTGGCCAAG+TGG | + | chr6_3:43617894-43617913 | Msa0951730:intron | 50.0% |
| !! | GGTTGGCCAAGTGGTTTGTT+TGG | + | chr6_3:43617903-43617922 | Msa0951730:intron | 50.0% |
| TCTTGAGAGGAGGAATCTCC+AGG | - | chr6_3:43617932-43617951 | None:intergenic | 50.0% | |
| GAACCTGCTGAGATCTTGAG+AGG | - | chr6_3:43617945-43617964 | None:intergenic | 50.0% | |
| TCAGCAGGTTCGATTTCCTC+TGG | + | chr6_3:43617954-43617973 | Msa0951730:intron | 50.0% | |
| CCTACCAAAATTGGCACCAG+AGG | - | chr6_3:43617973-43617992 | None:intergenic | 50.0% | |
| !! | CCTCTGGTGCCAATTTTGGT+AGG | + | chr6_3:43617970-43617989 | Msa0951730:intron | 50.0% |
| TTTAAATGGGGTCCCGCAAG+TGG | + | chr6_3:43618020-43618039 | Msa0951730:intron | 50.0% | |
| TTAAATGGGGTCCCGCAAGT+GGG | + | chr6_3:43618021-43618040 | Msa0951730:intron | 50.0% | |
| TCAATCCCACAACCCACTTG+CGG | - | chr6_3:43618036-43618055 | None:intergenic | 50.0% | |
| ! | CCCTCAGATTAGTCGGTCAT+TGG | + | chr6_3:43618058-43618077 | Msa0951730:intron | 50.0% |
| AGGGTGACAAAGCAGTGGTT+TGG | - | chr6_3:43618628-43618647 | None:intergenic | 50.0% | |
| TCTTTGCTACGTACGATGGC+TGG | - | chr6_3:43618828-43618847 | None:intergenic | 50.0% | |
| AGTAGATGTACCCCGAAGTG+CGG | + | chr6_3:43619056-43619075 | Msa0951730:intron | 50.0% | |
| CTCTGGCAGTCATCTTCTGA+TGG | - | chr6_3:43619410-43619429 | None:intergenic | 50.0% | |
| TCTATAGTGGTCGTTGCTCC+AGG | - | chr6_3:43619537-43619556 | None:intergenic | 50.0% | |
| TGGAGCAACGACCACTATAG+AGG | + | chr6_3:43619536-43619555 | Msa0951730:intron | 50.0% | |
| ! | ATCTCCTTGGAAGTGCAAGG+GGG | + | chr6_3:43620167-43620186 | Msa0951730:intron | 50.0% |
| GCGAGAAAGAACACCGCTAA+AGG | - | chr6_3:43620904-43620923 | None:intergenic | 50.0% | |
| CCTTAGCTAATGTCTCAGGG+CGG | - | chr6_3:43621430-43621449 | None:intergenic | 50.0% | |
| ACAACCTTCACCGCACGTTT+GGG | - | chr6_3:43621798-43621817 | None:intergenic | 50.0% | |
| TTTGTTTCCCCACCGATCCA+TGG | + | chr6_3:43621819-43621838 | Msa0951730:CDS | 50.0% | |
| TTGTTTCCCCACCGATCCAT+GGG | + | chr6_3:43621820-43621839 | Msa0951730:CDS | 50.0% | |
| ATATTCACCCGCCCATGGAT+CGG | - | chr6_3:43621834-43621853 | None:intergenic | 50.0% | |
| CAATCATATTCACCCGCCCA+TGG | - | chr6_3:43621839-43621858 | None:intergenic | 50.0% | |
| GAATGCAAAGAGAAGGGACG+TGG | + | chr6_3:43615084-43615103 | Msa0951730:CDS | 50.0% | |
| ACAACCTACGCCGCATGTTC+GGG | - | chr6_3:43614974-43614993 | None:intergenic | 55.0% | |
| CACAACCTACGCCGCATGTT+CGG | - | chr6_3:43614975-43614994 | None:intergenic | 55.0% | |
| GAAATGTTAACCGGTGCCCC+CGG | + | chr6_3:43616317-43616336 | Msa0951730:intron | 55.0% | |
| TTCCTTAACCAGTGCTCCGG+GGG | - | chr6_3:43616336-43616355 | None:intergenic | 55.0% | |
| CTTCCTTAACCAGTGCTCCG+GGG | - | chr6_3:43616337-43616356 | None:intergenic | 55.0% | |
| GGATTCCTTAACCAGTGCCC+CGG | + | chr6_3:43616446-43616465 | Msa0951730:intron | 55.0% | |
| GATTCCTTAACCAGTGCCCC+GGG | + | chr6_3:43616447-43616466 | Msa0951730:intron | 55.0% | |
| ATTCCTTAACCAGTGCCCCG+GGG | + | chr6_3:43616448-43616467 | Msa0951730:intron | 55.0% | |
| CCTGCTGAGATCTTGAGAGG+AGG | - | chr6_3:43617942-43617961 | None:intergenic | 55.0% | |
| CCTCCTCTCAAGATCTCAGC+AGG | + | chr6_3:43617939-43617958 | Msa0951730:intron | 55.0% | |
| CAATCCCACAACCCACTTGC+GGG | - | chr6_3:43618035-43618054 | None:intergenic | 55.0% | |
| TCCCCATTTCGTCCGCACTT+CGG | - | chr6_3:43619071-43619090 | None:intergenic | 55.0% | |
| AAGTCCCCCTTGCACTTCCA+AGG | - | chr6_3:43620174-43620193 | None:intergenic | 55.0% | |
| CCGCCCTGAGACATTAGCTA+AGG | + | chr6_3:43621427-43621446 | Msa0951730:intron | 55.0% | |
| TCAGCGACATCCCAAACGTG+CGG | + | chr6_3:43621785-43621804 | Msa0951730:intron | 55.0% | |
| ACATCCCAAACGTGCGGTGA+AGG | + | chr6_3:43621791-43621810 | Msa0951730:CDS | 55.0% | |
| CACAACCTTCACCGCACGTT+TGG | - | chr6_3:43621799-43621818 | None:intergenic | 55.0% | |
| ACATCCCGAACATGCGGCGT+AGG | + | chr6_3:43614967-43614986 | Msa0951730:CDS | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | + | chr6_3:43616449-43616468 | Msa0951730:intron | 60.0% | |
| ACCCCGAAGTGCGGACGAAA+TGG | + | chr6_3:43619065-43619084 | Msa0951730:intron | 60.0% | |
| CCCATTTCGTCCGCACTTCG+GGG | - | chr6_3:43619069-43619088 | None:intergenic | 60.0% | |
| CCCCGAAGTGCGGACGAAAT+GGG | + | chr6_3:43619066-43619085 | Msa0951730:intron | 60.0% | |
| CCCCATTTCGTCCGCACTTC+GGG | - | chr6_3:43619070-43619089 | None:intergenic | 60.0% | |
| CCCGAAGTGCGGACGAAATG+GGG | + | chr6_3:43619067-43619086 | Msa0951730:intron | 60.0% | |
| AGGAGAGAGAGCGGGAGAGA+CGG | - | chr6_3:43621108-43621127 | None:intergenic | 60.0% | |
| TTTCCCCACCGATCCATGGG+CGG | + | chr6_3:43621823-43621842 | Msa0951730:CDS | 60.0% | |
| !! | TGCCCCCGGAGCACTGGTTA+AGG | + | chr6_3:43616331-43616350 | Msa0951730:intron | 65.0% |
| TCCTGTTAACCGGTGCCCCC+GGG | - | chr6_3:43616467-43616486 | None:intergenic | 65.0% | |
| GTCCTGTTAACCGGTGCCCC+CGG | - | chr6_3:43616468-43616487 | None:intergenic | 65.0% | |
| !! | GGGTCCCGCAAGTGGGTTGT+GGG | + | chr6_3:43618028-43618047 | Msa0951730:intron | 65.0% |
| GAGCGGGAGAGACGGAGAGT+AGG | - | chr6_3:43621100-43621119 | None:intergenic | 65.0% | |
| TTCCCCACCGATCCATGGGC+GGG | + | chr6_3:43621824-43621843 | Msa0951730:CDS | 65.0% | |
| TCACCCGCCCATGGATCGGT+GGG | - | chr6_3:43621830-43621849 | None:intergenic | 65.0% | |
| TTCACCCGCCCATGGATCGG+TGG | - | chr6_3:43621831-43621850 | None:intergenic | 65.0% | |
| ! | AACCAGTGCTCCGGGGGCAC+CGG | - | chr6_3:43616330-43616349 | None:intergenic | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr6_3:43616454-43616473 | None:intergenic | 70.0% |
| CCTGTTAACCGGTGCCCCCG+GGG | - | chr6_3:43616466-43616485 | None:intergenic | 70.0% | |
| !! | GGGGTCCCGCAAGTGGGTTG+TGG | + | chr6_3:43618027-43618046 | Msa0951730:intron | 70.0% |
| CACCCGCCCATGGATCGGTG+GGG | - | chr6_3:43621829-43621848 | None:intergenic | 70.0% | |
| AACCGGTGCCCCCGGAGCAC+TGG | + | chr6_3:43616325-43616344 | Msa0951730:intron | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr6_3:43616455-43616474 | Msa0951730:intron | 75.0% |
| !! | CCCCGGGGGCACCGGTTAAC+AGG | + | chr6_3:43616463-43616482 | Msa0951730:intron | 75.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr6_3:43616460-43616479 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 43614908 | 43622090 | 43614908 | ID=Msa0951730;Name=Msa0951730 |
| chr6_3 | mRNA | 43614908 | 43622090 | 43614908 | ID=Msa0951730-mRNA-1;Parent=Msa0951730;Name=Msa0951730-mRNA-1;_AED=0.16;_eAED=0.17;_QI=11|0|0|1|0|0|2|0|177 |
| chr6_3 | exon | 43614908 | 43615147 | 43614908 | ID=Msa0951730-mRNA-1:exon:10019;Parent=Msa0951730-mRNA-1 |
| chr6_3 | exon | 43621789 | 43622090 | 43621789 | ID=Msa0951730-mRNA-1:exon:10020;Parent=Msa0951730-mRNA-1 |
| chr6_3 | five_prime_UTR | 43614908 | 43614918 | 43614908 | ID=Msa0951730-mRNA-1:five_prime_utr;Parent=Msa0951730-mRNA-1 |
| chr6_3 | CDS | 43614919 | 43615147 | 43614919 | ID=Msa0951730-mRNA-1:cds;Parent=Msa0951730-mRNA-1 |
| chr6_3 | CDS | 43621789 | 43622090 | 43621789 | ID=Msa0951730-mRNA-1:cds;Parent=Msa0951730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
